ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal36c20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193396.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 458 bits (231), Expect = e-126 Identities = 326/357 (91%), Gaps = 1/357 (0%) Strand = Plus / Plus Query: 94 tcggagaagcggttcaagacgctgccggcgtccgaggcgctgcctaggaacgagcccatc 153 ||||| ||| |||||||||||||||||||||| |||||||| || || ||||| ||||| Sbjct: 595 tcggacaagaggttcaagacgctgccggcgtcggaggcgctcccccgggacgaggccatc 654 Query: 154 ggcggctacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctc 213 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 655 ggcggctacatcttcgtctgcaacaacgacaccatggaggaaaacctcaagaggcagctc 714 Query: 214 ttcgggttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctc 273 |||||| | ||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 715 ttcgggcttccatcgagatacagggattcagtgagggcgatcaggccagggctgcccctc 774 Query: 274 ttcctctacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggc 333 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 775 ttcctctacaactactccacccaccagctccacggcatcttcgaggctgcgagctttggc 834 Query: 334 ggagcaaacatcgacccggcggcgtgggaggacaagaagtgcaacggcgagtcccgcttc 393 ||| |||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||| Sbjct: 835 ggaacaaacatcgatccgacggcgtgggaggacaagaagtgccccggcgagtcgcgcttc 894 Query: 394 cctgcacaggtgagggtggccacaaggaagatctgcgacccactgggaggaggacgc 450 ||||||||||||| ||| || || |||||||||| ||||| || |||||||||||| Sbjct: 895 cctgcacaggtgaaggttgcgacgaggaagatctatgacccgct-ggaggaggacgc 950 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 aagaagaagcacgccaagaac 63 ||||||||||||||||||||| Sbjct: 553 aagaagaagcacgccaagaac 573
>dbj|AK061870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A03, full insert sequence Length = 1418 Score = 458 bits (231), Expect = e-126 Identities = 326/357 (91%), Gaps = 1/357 (0%) Strand = Plus / Plus Query: 94 tcggagaagcggttcaagacgctgccggcgtccgaggcgctgcctaggaacgagcccatc 153 ||||| ||| |||||||||||||||||||||| |||||||| || || ||||| ||||| Sbjct: 590 tcggacaagaggttcaagacgctgccggcgtcggaggcgctcccccgggacgaggccatc 649 Query: 154 ggcggctacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctc 213 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 650 ggcggctacatcttcgtctgcaacaacgacaccatggaggaaaacctcaagaggcagctc 709 Query: 214 ttcgggttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctc 273 |||||| | ||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 710 ttcgggcttccatcgagatacagggattcagtgagggcgatcaggccagggctgcccctc 769 Query: 274 ttcctctacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggc 333 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 770 ttcctctacaactactccacccaccagctccacggcatcttcgaggctgcgagctttggc 829 Query: 334 ggagcaaacatcgacccggcggcgtgggaggacaagaagtgcaacggcgagtcccgcttc 393 ||| |||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||| Sbjct: 830 ggaacaaacatcgatccgacggcgtgggaggacaagaagtgccccggcgagtcgcgcttc 889 Query: 394 cctgcacaggtgagggtggccacaaggaagatctgcgacccactgggaggaggacgc 450 ||||||||||||| ||| || || |||||||||| ||||| || |||||||||||| Sbjct: 890 cctgcacaggtgaaggttgcgacgaggaagatctatgacccgct-ggaggaggacgc 945 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 aagaagaagcacgccaagaac 63 ||||||||||||||||||||| Sbjct: 548 aagaagaagcacgccaagaac 568
>dbj|AK106151.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-H09, full insert sequence Length = 1489 Score = 458 bits (231), Expect = e-126 Identities = 326/357 (91%), Gaps = 1/357 (0%) Strand = Plus / Plus Query: 94 tcggagaagcggttcaagacgctgccggcgtccgaggcgctgcctaggaacgagcccatc 153 ||||| ||| |||||||||||||||||||||| |||||||| || || ||||| ||||| Sbjct: 662 tcggacaagaggttcaagacgctgccggcgtcggaggcgctcccccgggacgaggccatc 721 Query: 154 ggcggctacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctc 213 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 722 ggcggctacatcttcgtctgcaacaacgacaccatggaggaaaacctcaagaggcagctc 781 Query: 214 ttcgggttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctc 273 |||||| | ||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 782 ttcgggcttccatcgagatacagggattcagtgagggcgatcaggccagggctgcccctc 841 Query: 274 ttcctctacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggc 333 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 842 ttcctctacaactactccacccaccagctccacggcatcttcgaggctgcgagctttggc 901 Query: 334 ggagcaaacatcgacccggcggcgtgggaggacaagaagtgcaacggcgagtcccgcttc 393 ||| |||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||| Sbjct: 902 ggaacaaacatcgatccgacggcgtgggaggacaagaagtgccccggcgagtcgcgcttc 961 Query: 394 cctgcacaggtgagggtggccacaaggaagatctgcgacccactgggaggaggacgc 450 ||||||||||||| ||| || || |||||||||| ||||| || |||||||||||| Sbjct: 962 cctgcacaggtgaaggttgcgacgaggaagatctatgacccgct-ggaggaggacgc 1017 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 aagaagaagcacgccaagaac 63 ||||||||||||||||||||| Sbjct: 620 aagaagaagcacgccaagaac 640
>dbj|AK067529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108E24, full insert sequence Length = 1622 Score = 458 bits (231), Expect = e-126 Identities = 326/357 (91%), Gaps = 1/357 (0%) Strand = Plus / Plus Query: 94 tcggagaagcggttcaagacgctgccggcgtccgaggcgctgcctaggaacgagcccatc 153 ||||| ||| |||||||||||||||||||||| |||||||| || || ||||| ||||| Sbjct: 663 tcggacaagaggttcaagacgctgccggcgtcggaggcgctcccccgggacgaggccatc 722 Query: 154 ggcggctacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctc 213 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 723 ggcggctacatcttcgtctgcaacaacgacaccatggaggaaaacctcaagaggcagctc 782 Query: 214 ttcgggttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctc 273 |||||| | ||||| |||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 783 ttcgggcttccatcgagatacagggattcagtgagggcgatcaggccagggctgcccctc 842 Query: 274 ttcctctacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggc 333 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 843 ttcctctacaactactccacccaccagctccacggcatcttcgaggctgcgagctttggc 902 Query: 334 ggagcaaacatcgacccggcggcgtgggaggacaagaagtgcaacggcgagtcccgcttc 393 ||| |||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||| Sbjct: 903 ggaacaaacatcgatccgacggcgtgggaggacaagaagtgccccggcgagtcgcgcttc 962 Query: 394 cctgcacaggtgagggtggccacaaggaagatctgcgacccactgggaggaggacgc 450 ||||||||||||| ||| || || |||||||||| ||||| || |||||||||||| Sbjct: 963 cctgcacaggtgaaggttgcgacgaggaagatctatgacccgct-ggaggaggacgc 1018 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 aagaagaagcacgccaagaac 63 ||||||||||||||||||||| Sbjct: 621 aagaagaagcacgccaagaac 641
>gb|AY104341.1| Zea mays PCO142367 mRNA sequence Length = 1295 Score = 319 bits (161), Expect = 4e-84 Identities = 305/351 (86%), Gaps = 2/351 (0%) Strand = Plus / Plus Query: 101 agcggttcaagacgctgccggcgtccgaggcgctgcctaggaacgagcccatcggcggct 160 ||||||||||||||||||||||||| ||||||||||| || | || |||||||||| | Sbjct: 449 agcggttcaagacgctgccggcgtcggaggcgctgccgcggggccaggccatcggcgggt 508 Query: 161 acatcttcgtntgnaacaacgacaccatggaggag-aacctcaagaggcagctcttcggg 219 |||||||||| || ||||||||||| ||||| ||| ||||||| |||| |||| |||||| Sbjct: 509 acatcttcgtctgcaacaacgacactatggacgaggaacctcaggagggagctgttcggg 568 Query: 220 ttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctc 279 |||| ||||| ||||| || || ||| | || ||| | ||||| ||||||||||||||| Sbjct: 569 ctgccgtccaggtacagggactctgtgcgtgctatccgcccgggactgcccctcttcctc 628 Query: 280 tacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggcggagca 339 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 629 tacaactactccacgcaccagctccacggcatcttcgaggccgcgagcttcggcgggacc 688 Query: 340 aacatcgacccggcggcgtgggaggacaagaagtgcaacggcgagtcccgcttccctgca 399 |||||||||||| ||||||||||||||||||||||| ||||||||| ||||| ||||| Sbjct: 689 aacatcgacccgacggcgtgggaggacaagaagtgccccggcgagtcgcgctttcctgcg 748 Query: 400 caggtgagggtggccacaaggaagatctgcgacccactgggaggaggacgc 450 |||||| ||||||| || ||||||||| |||||| || |||||||||||| Sbjct: 749 caggtgcgggtggcaacgcggaagatctacgacccgct-ggaggaggacgc 798 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 38 acggcaagaagaagcacgccaagaacgag 66 |||||| ||||||||||||||||| |||| Sbjct: 395 acggcaggaagaagcacgccaagagcgag 423
>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0030I14, complete sequence Length = 159035 Score = 192 bits (97), Expect = 7e-46 Identities = 217/255 (85%), Gaps = 2/255 (0%) Strand = Plus / Minus Query: 114 gctgccggcgtccgaggcgctgcctaggaacgagcccatcggcggctacatcttcgtntg 173 |||||||||||| ||| || |||| | | | ||| | ||||| || ||||| ||||| || Sbjct: 13223 gctgccggcgtcggagtcggtgccaaaggaggaggcgatcgggggatacatattcgtgtg 13164 Query: 174 naacaacgacaccatggaggagaacctcaagaggcagctcttcgggttgccatccagata 233 |||||||| || ||||||||||| |||||||||||||| ||||| |||||||||| || Sbjct: 13163 caacaacgagacgatggaggagaatctcaagaggcagctgttcggcctgccatccaggta 13104 Query: 234 cagagattcagtgagggcgatcaggccggggctgcccctcttcctctacaactactccac 293 ||| || || |||||||| |||||||| || || || ||||||||||||||||||||||| Sbjct: 13103 cagggactcggtgagggccatcaggcccggcctcccgctcttcctctacaactactccac 13044 Query: 294 ccaccagctccacggcatcttcgaggccgcgagctttggcggagcaaacatcga-cccgg 352 ||||||||| |||||||||||||||||| | ||||| |||||| | |||||||| ||||| Sbjct: 13043 ccaccagcttcacggcatcttcgaggccaccagcttcggcggatccaacatcgatcccgg 12984 Query: 353 cggcgtgggaggaca 367 | || |||||||||| Sbjct: 12983 c-gcttgggaggaca 12970
>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03, complete sequence Length = 45160 Score = 192 bits (97), Expect = 7e-46 Identities = 217/255 (85%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 114 gctgccggcgtccgaggcgctgcctaggaacgagcccatcggcggctacatcttcgtntg 173 |||||||||||| ||| || |||| | | | ||| | ||||| || ||||| ||||| || Sbjct: 28067 gctgccggcgtcggagtcggtgccaaaggaggaggcgatcgggggatacatattcgtgtg 28126 Query: 174 naacaacgacaccatggaggagaacctcaagaggcagctcttcgggttgccatccagata 233 |||||||| || ||||||||||| |||||||||||||| ||||| |||||||||| || Sbjct: 28127 caacaacgagacgatggaggagaatctcaagaggcagctgttcggcctgccatccaggta 28186 Query: 234 cagagattcagtgagggcgatcaggccggggctgcccctcttcctctacaactactccac 293 ||| || || |||||||| |||||||| || || || ||||||||||||||||||||||| Sbjct: 28187 cagggactcggtgagggccatcaggcccggcctcccgctcttcctctacaactactccac 28246 Query: 294 ccaccagctccacggcatcttcgaggccgcgagctttggcggagcaaacatcga-cccgg 352 ||||||||| |||||||||||||||||| | ||||| |||||| | |||||||| ||||| Sbjct: 28247 ccaccagcttcacggcatcttcgaggccaccagcttcggcggatccaacatcgatcccgg 28306 Query: 353 cggcgtgggaggaca 367 | || |||||||||| Sbjct: 28307 c-gcttgggaggaca 28320
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 192 bits (97), Expect = 7e-46 Identities = 217/255 (85%), Gaps = 2/255 (0%) Strand = Plus / Minus Query: 114 gctgccggcgtccgaggcgctgcctaggaacgagcccatcggcggctacatcttcgtntg 173 |||||||||||| ||| || |||| | | | ||| | ||||| || ||||| ||||| || Sbjct: 29365198 gctgccggcgtcggagtcggtgccaaaggaggaggcgatcgggggatacatattcgtgtg 29365139 Query: 174 naacaacgacaccatggaggagaacctcaagaggcagctcttcgggttgccatccagata 233 |||||||| || ||||||||||| |||||||||||||| ||||| |||||||||| || Sbjct: 29365138 caacaacgagacgatggaggagaatctcaagaggcagctgttcggcctgccatccaggta 29365079 Query: 234 cagagattcagtgagggcgatcaggccggggctgcccctcttcctctacaactactccac 293 ||| || || |||||||| |||||||| || || || ||||||||||||||||||||||| Sbjct: 29365078 cagggactcggtgagggccatcaggcccggcctcccgctcttcctctacaactactccac 29365019 Query: 294 ccaccagctccacggcatcttcgaggccgcgagctttggcggagcaaacatcga-cccgg 352 ||||||||| |||||||||||||||||| | ||||| |||||| | |||||||| ||||| Sbjct: 29365018 ccaccagcttcacggcatcttcgaggccaccagcttcggcggatccaacatcgatcccgg 29364959 Query: 353 cggcgtgggaggaca 367 | || |||||||||| Sbjct: 29364958 c-gcttgggaggaca 29364945 Score = 48.1 bits (24), Expect = 0.025 Identities = 43/50 (86%) Strand = Plus / Minus Query: 163 atcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagct 212 ||||| || || ||||| ||||||||| ||||| | |||||||||||||| Sbjct: 24409037 atctttgtttgcaacaatgacaccatgcaggaggatctcaagaggcagct 24408988
>dbj|AK106130.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F10, full insert sequence Length = 1306 Score = 192 bits (97), Expect = 7e-46 Identities = 217/255 (85%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 114 gctgccggcgtccgaggcgctgcctaggaacgagcccatcggcggctacatcttcgtntg 173 |||||||||||| ||| || |||| | | | ||| | ||||| || ||||| ||||| || Sbjct: 619 gctgccggcgtcggagtcggtgccaaaggaggaggcgatcgggggatacatattcgtgtg 678 Query: 174 naacaacgacaccatggaggagaacctcaagaggcagctcttcgggttgccatccagata 233 |||||||| || ||||||||||| |||||||||||||| ||||| |||||||||| || Sbjct: 679 caacaacgagacgatggaggagaatctcaagaggcagctgttcggcctgccatccaggta 738 Query: 234 cagagattcagtgagggcgatcaggccggggctgcccctcttcctctacaactactccac 293 ||| || || |||||||| |||||||| || || || ||||||||||||||||||||||| Sbjct: 739 cagggactcggtgagggccatcaggcccggcctcccgctcttcctctacaactactccac 798 Query: 294 ccaccagctccacggcatcttcgaggccgcgagctttggcggagcaaacatcga-cccgg 352 ||||||||| |||||||||||||||||| | ||||| |||||| | |||||||| ||||| Sbjct: 799 ccaccagcttcacggcatcttcgaggccaccagcttcggcggatccaacatcgatcccgg 858 Query: 353 cggcgtgggaggaca 367 | || |||||||||| Sbjct: 859 c-gcttgggaggaca 872
>dbj|AK060122.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G03, full insert sequence Length = 1187 Score = 192 bits (97), Expect = 7e-46 Identities = 217/255 (85%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 114 gctgccggcgtccgaggcgctgcctaggaacgagcccatcggcggctacatcttcgtntg 173 |||||||||||| ||| || |||| | | | ||| | ||||| || ||||| ||||| || Sbjct: 499 gctgccggcgtcggagtcggtgccaaaggaggaggcgatcgggggatacatattcgtgtg 558 Query: 174 naacaacgacaccatggaggagaacctcaagaggcagctcttcgggttgccatccagata 233 |||||||| || ||||||||||| |||||||||||||| ||||| |||||||||| || Sbjct: 559 caacaacgagacgatggaggagaatctcaagaggcagctgttcggcctgccatccaggta 618 Query: 234 cagagattcagtgagggcgatcaggccggggctgcccctcttcctctacaactactccac 293 ||| || || |||||||| |||||||| || || || ||||||||||||||||||||||| Sbjct: 619 cagggactcggtgagggccatcaggcccggcctcccgctcttcctctacaactactccac 678 Query: 294 ccaccagctccacggcatcttcgaggccgcgagctttggcggagcaaacatcga-cccgg 352 ||||||||| |||||||||||||||||| | ||||| |||||| | |||||||| ||||| Sbjct: 679 ccaccagcttcacggcatcttcgaggccaccagcttcggcggatccaacatcgatcccgg 738 Query: 353 cggcgtgggaggaca 367 | || |||||||||| Sbjct: 739 c-gcttgggaggaca 752
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Minus Query: 223 ccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctctac 282 ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 20597445 ccatcgagatacagggattcagtgagggcgatcaggccagggctgcccctcttcctctac 20597386 Query: 283 aactactccacccaccagctccacggcatcttcgagg 319 ||||||||||||||||||||||||||||||||||||| Sbjct: 20597385 aactactccacccaccagctccacggcatcttcgagg 20597349 Score = 165 bits (83), Expect = 2e-37 Identities = 114/125 (91%) Strand = Plus / Minus Query: 94 tcggagaagcggttcaagacgctgccggcgtccgaggcgctgcctaggaacgagcccatc 153 ||||| ||| |||||||||||||||||||||| |||||||| || || ||||| ||||| Sbjct: 20597707 tcggacaagaggttcaagacgctgccggcgtcggaggcgctcccccgggacgaggccatc 20597648 Query: 154 ggcggctacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctc 213 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 20597647 ggcggctacatcttcgtctgcaacaacgacaccatggaggaaaacctcaagaggcagctc 20597588 Query: 214 ttcgg 218 ||||| Sbjct: 20597587 ttcgg 20597583 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Minus Query: 317 aggccgcgagctttggcggagcaaacatcgacccggcggcgtgggaggacaagaagtgca 376 |||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 20596986 aggctgcgagctttggcggaacaaacatcgatccgacggcgtgggaggacaagaagtgcc 20596927 Query: 377 acggcgagtcccgcttccctgcacaggt 404 ||||||||| ||||||||||||||||| Sbjct: 20596926 ccggcgagtcgcgcttccctgcacaggt 20596899 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 aagaagaagcacgccaagaac 63 ||||||||||||||||||||| Sbjct: 20597749 aagaagaagcacgccaagaac 20597729
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Minus Query: 223 ccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctctac 282 ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 59421 ccatcgagatacagggattcagtgagggcgatcaggccagggctgcccctcttcctctac 59362 Query: 283 aactactccacccaccagctccacggcatcttcgagg 319 ||||||||||||||||||||||||||||||||||||| Sbjct: 59361 aactactccacccaccagctccacggcatcttcgagg 59325 Score = 165 bits (83), Expect = 2e-37 Identities = 114/125 (91%) Strand = Plus / Minus Query: 94 tcggagaagcggttcaagacgctgccggcgtccgaggcgctgcctaggaacgagcccatc 153 ||||| ||| |||||||||||||||||||||| |||||||| || || ||||| ||||| Sbjct: 59683 tcggacaagaggttcaagacgctgccggcgtcggaggcgctcccccgggacgaggccatc 59624 Query: 154 ggcggctacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctc 213 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 59623 ggcggctacatcttcgtctgcaacaacgacaccatggaggaaaacctcaagaggcagctc 59564 Query: 214 ttcgg 218 ||||| Sbjct: 59563 ttcgg 59559 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Minus Query: 317 aggccgcgagctttggcggagcaaacatcgacccggcggcgtgggaggacaagaagtgca 376 |||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 58962 aggctgcgagctttggcggaacaaacatcgatccgacggcgtgggaggacaagaagtgcc 58903 Query: 377 acggcgagtcccgcttccctgcacaggt 404 ||||||||| ||||||||||||||||| Sbjct: 58902 ccggcgagtcgcgcttccctgcacaggt 58875 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 aagaagaagcacgccaagaac 63 ||||||||||||||||||||| Sbjct: 59725 aagaagaagcacgccaagaac 59705
>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1156H12 Length = 159509 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Minus Query: 223 ccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctctac 282 ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 121267 ccatcgagatacagggattcagtgagggcgatcaggccagggctgcccctcttcctctac 121208 Query: 283 aactactccacccaccagctccacggcatcttcgagg 319 ||||||||||||||||||||||||||||||||||||| Sbjct: 121207 aactactccacccaccagctccacggcatcttcgagg 121171 Score = 165 bits (83), Expect = 2e-37 Identities = 114/125 (91%) Strand = Plus / Minus Query: 94 tcggagaagcggttcaagacgctgccggcgtccgaggcgctgcctaggaacgagcccatc 153 ||||| ||| |||||||||||||||||||||| |||||||| || || ||||| ||||| Sbjct: 121529 tcggacaagaggttcaagacgctgccggcgtcggaggcgctcccccgggacgaggccatc 121470 Query: 154 ggcggctacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctc 213 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 121469 ggcggctacatcttcgtctgcaacaacgacaccatggaggaaaacctcaagaggcagctc 121410 Query: 214 ttcgg 218 ||||| Sbjct: 121409 ttcgg 121405 Score = 119 bits (60), Expect = 8e-24 Identities = 81/88 (92%) Strand = Plus / Minus Query: 317 aggccgcgagctttggcggagcaaacatcgacccggcggcgtgggaggacaagaagtgca 376 |||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 120808 aggctgcgagctttggcggaacaaacatcgatccgacggcgtgggaggacaagaagtgcc 120749 Query: 377 acggcgagtcccgcttccctgcacaggt 404 ||||||||| ||||||||||||||||| Sbjct: 120748 ccggcgagtcgcgcttccctgcacaggt 120721 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 aagaagaagcacgccaagaac 63 ||||||||||||||||||||| Sbjct: 121571 aagaagaagcacgccaagaac 121551
>gb|DQ205320.1| Coix lacryma-jobi clone GBssrJT149 microsatellite sequence Length = 427 Score = 161 bits (81), Expect = 2e-36 Identities = 106/115 (92%) Strand = Plus / Plus Query: 104 ggttcaagacgctgccggcgtccgaggcgctgcctaggaacgagcccatcggcggctaca 163 ||||||||| |||||||||||||||| |||||| ||| |||| ||||||||||||||| Sbjct: 189 ggttcaagagcctgccggcgtccgaggtgctgcccaggggcgaggccatcggcggctaca 248 Query: 164 tcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcgg 218 ||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 tcttcgtctgcaacaacgacaccatggaggagaacctcaagaggcagctcttcgg 303
>gb|AY109212.1| Zea mays PCO142361 mRNA sequence Length = 562 Score = 123 bits (62), Expect = 5e-25 Identities = 117/134 (87%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 317 aggccgcgagctttggcggagcaaacatcgacccggcggcgtgggaggacaagaagtgca 376 ||||||| ||||| ||||| | |||||||||||| ||||||||||||||||||||||| Sbjct: 76 aggccgccagcttcggcgggaccaacatcgacccgacggcgtgggaggacaagaagtgcc 135 Query: 377 acggcgagtcccgcttccctgcacaggtgagggtggccacaaggaagatctgcgacccac 436 ||||||||| |||||||||||||||||| | ||||| || ||||||||| ||| |||| Sbjct: 136 ccggcgagtcgcgcttccctgcacaggtgcgagtggcaacgcggaagatctacgatccac 195 Query: 437 tgggaggaggacgc 450 | |||||||||||| Sbjct: 196 t-ggaggaggacgc 208
>gb|BT016764.1| Zea mays clone Contig597 mRNA sequence Length = 1573 Score = 65.9 bits (33), Expect = 1e-07 Identities = 115/143 (80%) Strand = Plus / Plus Query: 160 tacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcggg 219 |||||||| || || |||||||| |||||| ||||| |||||||||||||||| || || Sbjct: 694 tacatctttgtctgcaacaacgataccatgcaggaggacctcaagaggcagctttttgga 753 Query: 220 ttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctc 279 |||||| | |||| | |||||||| |||| || | || || ||||| || |||||| Sbjct: 754 ttgccagcacgatatcgtgattcagtccgggcaattactcctggcctgcctcttttcctc 813 Query: 280 tacaactactccacccaccagct 302 || |||||| |||| |||||||| Sbjct: 814 tataactacaccactcaccagct 836
>gb|AY108468.1| Zea mays PCO093809 mRNA sequence Length = 1259 Score = 65.9 bits (33), Expect = 1e-07 Identities = 115/143 (80%) Strand = Plus / Plus Query: 160 tacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcggg 219 |||||||| || || |||||||| |||||| ||||| |||||||||||||||| || || Sbjct: 324 tacatctttgtctgcaacaacgataccatgcaggaggacctcaagaggcagctttttgga 383 Query: 220 ttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctc 279 |||||| | |||| | |||||||| |||| || | || || ||||| || |||||| Sbjct: 384 ttgccagcacgatatcgtgattcagtccgggcaattactcctggcctgcctcttttcctc 443 Query: 280 tacaactactccacccaccagct 302 || |||||| |||| |||||||| Sbjct: 444 tataactacaccactcaccagct 466
>ref|NM_123570.2| Arabidopsis thaliana unknown protein AT5G42050 mRNA, complete cds Length = 1552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 146/185 (78%) Strand = Plus / Plus Query: 160 tacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcggg 219 |||||||| || || |||||||| |||||||| ||||| ||||| | ||||| ||||| Sbjct: 796 tacatctttgtctgcaacaacgataccatggaagagaatctcaaacgccagcttttcgga 855 Query: 220 ttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctc 279 |||||| | |||||||| || || || || ||||| | || || || || || || || Sbjct: 856 ttgccaccaagatacagggactcggttagagcgataactccaggacttcctctgtttctt 915 Query: 280 tacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggcggagca 339 |||||||||||||| ||||| || || || |||| |||||| || ||||| || ||| || Sbjct: 916 tacaactactccactcaccaacttcatggaatctacgaggcagctagcttcggaggaaca 975 Query: 340 aacat 344 ||||| Sbjct: 976 aacat 980
>gb|AY114057.1| Arabidopsis thaliana unknown protein (At5g42050) mRNA, complete cds Length = 1081 Score = 61.9 bits (31), Expect = 2e-06 Identities = 146/185 (78%) Strand = Plus / Plus Query: 160 tacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcggg 219 |||||||| || || |||||||| |||||||| ||||| ||||| | ||||| ||||| Sbjct: 655 tacatctttgtctgcaacaacgataccatggaagagaatctcaaacgccagcttttcgga 714 Query: 220 ttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctc 279 |||||| | |||||||| || || || || ||||| | || || || || || || || Sbjct: 715 ttgccaccaagatacagggactcggttagagcgataactccaggacttcctctgtttctt 774 Query: 280 tacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggcggagca 339 |||||||||||||| ||||| || || || |||| |||||| || ||||| || ||| || Sbjct: 775 tacaactactccactcaccaacttcatggaatctacgaggcagctagcttcggaggaaca 834 Query: 340 aacat 344 ||||| Sbjct: 835 aacat 839
>gb|AY080773.1| Arabidopsis thaliana unknown protein (At5g42050) mRNA, complete cds Length = 1497 Score = 61.9 bits (31), Expect = 2e-06 Identities = 146/185 (78%) Strand = Plus / Plus Query: 160 tacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcggg 219 |||||||| || || |||||||| |||||||| ||||| ||||| | ||||| ||||| Sbjct: 765 tacatctttgtctgcaacaacgataccatggaagagaatctcaaacgccagcttttcgga 824 Query: 220 ttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctc 279 |||||| | |||||||| || || || || ||||| | || || || || || || || Sbjct: 825 ttgccaccaagatacagggactcggttagagcgataactccaggacttcctctgtttctt 884 Query: 280 tacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggcggagca 339 |||||||||||||| ||||| || || || |||| |||||| || ||||| || ||| || Sbjct: 885 tacaactactccactcaccaacttcatggaatctacgaggcagctagcttcggaggaaca 944 Query: 340 aacat 344 ||||| Sbjct: 945 aacat 949
>emb|BX833882.1|CNS09Z8S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 802 Score = 61.9 bits (31), Expect = 2e-06 Identities = 146/185 (78%) Strand = Plus / Plus Query: 160 tacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcggg 219 |||||||| || || |||||||| |||||||| ||||| ||||| | ||||| ||||| Sbjct: 87 tacatctttgtctgcaacaacgataccatggaagagaatctcaaacgccagcttttcgga 146 Query: 220 ttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctc 279 |||||| | |||||||| || || || || ||||| | || || || || || || || Sbjct: 147 ttgccaccaagatacagggactcggttagagcgataactccaggacttcctctgtttctt 206 Query: 280 tacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggcggagca 339 |||||||||||||| |||| || || || |||| |||||| |||||||| || ||| || Sbjct: 207 tacaactactccactgaccaacttcatggaatctacgaggcagcgagcttcggaggaaca 266 Query: 340 aacat 344 ||||| Sbjct: 267 aacat 271
>gb|AY088465.1| Arabidopsis thaliana clone 6903 mRNA, complete sequence Length = 1513 Score = 61.9 bits (31), Expect = 2e-06 Identities = 146/185 (78%) Strand = Plus / Plus Query: 160 tacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcggg 219 |||||||| || || |||||||| |||||||| ||||| ||||| | ||||| ||||| Sbjct: 797 tacatctttgtctgcaacaacgataccatggaagagaatctcaaacgccagcttttcgga 856 Query: 220 ttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctc 279 |||||| | |||||||| || || || || ||||| | || || || || || || || Sbjct: 857 ttgccaccaagatacagggactcggttagagcgataactccaggacttcctctgtttctt 916 Query: 280 tacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggcggagca 339 |||||||||||||| ||||| || || || |||| |||||| || ||||| || ||| || Sbjct: 917 tacaactactccactcaccaacttcatggaatctacgaggcagctagcttcggaggaaca 976 Query: 340 aacat 344 ||||| Sbjct: 977 aacat 981
>emb|AJ875407.1| Glycine max mRNA for N-rich protein (nrp gene) Length = 1450 Score = 60.0 bits (30), Expect = 7e-06 Identities = 174/220 (79%), Gaps = 2/220 (0%) Strand = Plus / Plus Query: 157 ggctacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttc 216 ||||||||||| || || ||||| || ||||||| ||||| ||| | || |||||||| Sbjct: 743 ggctacatctttgtttgcaacaatgataccatggcagagaatctccaaagacagctcttt 802 Query: 217 gggttgccatcca-gatacagagattcagtgagggcgatcaggccggggctgcccctctt 275 || |||| |||| |||||||||||||||| || | || | || ||| ||||| | || Sbjct: 803 ggtctgcc-tccacgatacagagattcagtaagaacaataactccagggttgcccatttt 861 Query: 276 cctctacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggcgg 335 || |||||||||||||| ||||| ||||| || ||||| ||||| || || ||||| || Sbjct: 862 tctgtacaactactccactcaccaactccatggtatctttgaggctgcaagttttggagg 921 Query: 336 agcaaacatcgacccggcggcgtgggaggacaagaagtgc 375 | | || || || || |||| |||||||||||||||||| Sbjct: 922 atccaatattgatccaacggcttgggaggacaagaagtgc 961
>ref|XM_475495.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 945 Score = 58.0 bits (29), Expect = 3e-05 Identities = 54/63 (85%) Strand = Plus / Plus Query: 163 atcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcgggttg 222 ||||| || || ||||| ||||||||| ||||| | |||||||||||||| || |||||| Sbjct: 553 atctttgtttgcaacaatgacaccatgcaggaggatctcaagaggcagctttttgggttg 612 Query: 223 cca 225 ||| Sbjct: 613 cca 615
>dbj|AK065975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045D18, full insert sequence Length = 1546 Score = 58.0 bits (29), Expect = 3e-05 Identities = 54/63 (85%) Strand = Plus / Plus Query: 163 atcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcgggttg 222 ||||| || || ||||| ||||||||| ||||| | |||||||||||||| || |||||| Sbjct: 797 atctttgtttgcaacaatgacaccatgcaggaggatctcaagaggcagctttttgggttg 856 Query: 223 cca 225 ||| Sbjct: 857 cca 859
>gb|AY104790.1| Zea mays PCO093811 mRNA sequence Length = 1604 Score = 58.0 bits (29), Expect = 3e-05 Identities = 114/143 (79%) Strand = Plus / Plus Query: 160 tacatcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagctcttcggg 219 |||||||| || || |||||||| |||||| ||||| | |||||||||||||| || || Sbjct: 688 tacatctttgtctgcaacaacgataccatgcaggaggatctcaagaggcagctttttggt 747 Query: 220 ttgccatccagatacagagattcagtgagggcgatcaggccggggctgcccctcttcctc 279 |||||| | ||||| | |||||||| | || |||| || || |||| || |||||| Sbjct: 748 ttgccagcaagatatcgtgattcagtccgagcaatcactcctggcttgcctcttttcctc 807 Query: 280 tacaactactccacccaccagct 302 || |||||| | ||||||||||| Sbjct: 808 tataactacacaacccaccagct 830
>emb|X72385.1|DCB2P D.carota mRNA for B2 protein Length = 935 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 277 ctctacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggcgga 336 |||||||| |||||||| |||||||| || || | || ||||| || |||||||| ||| Sbjct: 369 ctctacaattactccactcaccagctacatggtgtttttgaggctgcaagctttggagga 428 Query: 337 gcaaacatcgacccggcggcgtgggaggacaagaagtgcaacggcgagtcccgcttccct 396 ||||||| || || | || ||||||||||||||| | | || || |||||||||||| Sbjct: 429 acaaacattgatcccactgcttgggaggacaagaagaaccaaggagaatcccgcttccct 488 Query: 397 gcacaggt 404 || ||||| Sbjct: 489 gctcaggt 496
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 48.1 bits (24), Expect = 0.025 Identities = 43/50 (86%) Strand = Plus / Minus Query: 163 atcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagct 212 ||||| || || ||||| ||||||||| ||||| | |||||||||||||| Sbjct: 11710 atctttgtttgcaacaatgacaccatgcaggaggatctcaagaggcagct 11661
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 48.1 bits (24), Expect = 0.025 Identities = 43/50 (86%) Strand = Plus / Minus Query: 163 atcttcgtntgnaacaacgacaccatggaggagaacctcaagaggcagct 212 ||||| || || ||||| ||||||||| ||||| | |||||||||||||| Sbjct: 94827 atctttgtttgcaacaatgacaccatgcaggaggatctcaagaggcagct 94778
>gb|BT013344.1| Lycopersicon esculentum clone 135280R, mRNA sequence Length = 1475 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 274 ttcctctacaactactccacccaccagctccacggcatcttcgaggccgcgagctt 329 ||||||||||||||||| || |||||||| ||||| || || ||||| || ||||| Sbjct: 1022 ttcctctacaactactcaactcaccagcttcacggaatttttgaggctgcaagctt 1077
>gb|BT014106.1| Lycopersicon esculentum clone 133210F, mRNA sequence Length = 1420 Score = 46.1 bits (23), Expect = 0.099 Identities = 86/107 (80%) Strand = Plus / Plus Query: 266 tgcccctcttcctctacaactactccacccaccagctccacggcatcttcgaggccgcga 325 |||| ||||| || ||||||||||| ||||| ||||| ||||| | || ||||| || | Sbjct: 932 tgcctctctttctgtacaactactcaacccatcagcttcacggagtttttgaggctgcaa 991 Query: 326 gctttggcggagcaaacatcgacccggcggcgtgggaggacaagaag 372 ||||||| || |||| || || || |||| ||||||||||||||| Sbjct: 992 gctttggtgggtcaaatattgatccatcggcctgggaggacaagaag 1038
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 cggcgccgcctcggagaagcggttca 109 |||||||||||||| ||||||||||| Sbjct: 6384762 cggcgccgcctcggcgaagcggttca 6384787
>gb|M12389.2|MUSIGHANB Mus musculus immunoglobulin heavy chain gamma-1 switch region Length = 9235 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 265 ctgcccctcttcctctacaactact 289 |||||||| |||||||||||||||| Sbjct: 8646 ctgcccctgttcctctacaactact 8622
>gb|AF321856.1|AF321856 Lolium rigidum clone FHH-t putative cytochrome P450 mRNA, complete cds Length = 1775 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 gacccggcggcgtgggaggac 366 ||||||||||||||||||||| Sbjct: 1283 gacccggcggcgtgggaggac 1303
>gb|AF321855.1|AF321855 Lolium rigidum clone FHH-v putative cytochrome P450 mRNA, complete cds Length = 1795 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 gacccggcggcgtgggaggac 366 ||||||||||||||||||||| Sbjct: 1283 gacccggcggcgtgggaggac 1303
>gb|AY074448.1| Trichosurus vulpecula clone TrvuVL12 immunoglobulin lambda light chain variable region mRNA, partial cds Length = 455 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 ccctgcacaggtgagggtggc 413 ||||||||||||||||||||| Sbjct: 174 ccctgcacaggtgagggtggc 154
>dbj|D78344.1| Mus musculus DNA, gamma gene loci of immunoglobulin heavy chains Length = 59641 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 265 ctgcccctcttcctctacaactact 289 |||||||| |||||||||||||||| Sbjct: 8388 ctgcccctgttcctctacaactact 8364
>dbj|AB017067.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJC20 Length = 83689 Score = 42.1 bits (21), Expect = 1.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 tacaactactccacccaccagctccacggcatcttcgaggccgcgagctttggcggagca 339 |||||||||||||| ||||| || || || |||| |||||| || ||||| || ||| || Sbjct: 38717 tacaactactccactcaccaacttcatggaatctacgaggcagctagcttcggaggaaca 38776 Query: 340 aacat 344 ||||| Sbjct: 38777 aacat 38781
>emb|AJ851868.2| Mus musculus immunoglobulin heavy chain locus constant region and partial variable region, strain 129/Sv Length = 1382053 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 265 ctgcccctcttcctctacaactact 289 |||||||| |||||||||||||||| Sbjct: 1306807 ctgcccctgttcctctacaactact 1306783
>ref|XM_469849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1539 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gacccggcggcgtgggagga 365 |||||||||||||||||||| Sbjct: 1237 gacccggcggcgtgggagga 1256
>ref|XM_479487.1| Oryza sativa (japonica cultivar-group), mRNA Length = 691 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 gaagggcgccgcggacggcaagaagaag 51 |||||||| ||||| ||||||||||||| Sbjct: 107 gaagggcggcgcgggcggcaagaagaag 134
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0081F16 map E50055S, complete sequence Length = 148220 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 aagaagcacgccaagaacga 65 |||||||||||||||||||| Sbjct: 50435 aagaagcacgccaagaacga 50454
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cggcatcttcgaggccgcga 325 |||||||||||||||||||| Sbjct: 406687 cggcatcttcgaggccgcga 406668
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gacccggcggcgtgggagga 365 |||||||||||||||||||| Sbjct: 31134961 gacccggcggcgtgggagga 31134980
>gb|AC133207.3| Mus musculus BAC clone RP23-116L23 from chromosome 10, complete sequence Length = 222101 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 44 agaagaagcacgccaagaacgagagagg 71 |||||||||||||||||| | ||||||| Sbjct: 159725 agaagaagcacgccaagagccagagagg 159752
>ref|XM_948809.1| Theileria annulata strain Ankara DNA repair protein (TA06130) partial mRNA Length = 987 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cttcctctacaactactcca 292 |||||||||||||||||||| Sbjct: 266 cttcctctacaactactcca 285
>gb|AC004935.1| Homo sapiens PAC clone RP5-953F6 from 7, complete sequence Length = 98935 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 ctccacccaccagctccacggcat 311 ||||||||||||| |||||||||| Sbjct: 89559 ctccacccaccaggtccacggcat 89536
>emb|CR391924.9| Zebrafish DNA sequence from clone CH211-135F11 in linkage group 5, complete sequence Length = 142997 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tacaactactccacccacca 299 |||||||||||||||||||| Sbjct: 49799 tacaactactccacccacca 49780
>gb|AC087891.12| Mus musculus Strain C57BL6/J Chromosome 10 RP23-440N1, complete sequence Length = 195052 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 44 agaagaagcacgccaagaacgagagagg 71 |||||||||||||||||| | ||||||| Sbjct: 164525 agaagaagcacgccaagagccagagagg 164498
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 agaagcacgccaagaacgag 66 |||||||||||||||||||| Sbjct: 2224279 agaagcacgccaagaacgag 2224260
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gacccggcggcgtgggagga 365 |||||||||||||||||||| Sbjct: 55602 gacccggcggcgtgggagga 55621
>gb|AY533541.1| Ictalurus punctatus putative membrane progestin receptor beta mRNA, complete cds Length = 3487 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gctgcccctcttcctctaca 283 |||||||||||||||||||| Sbjct: 1046 gctgcccctcttcctctaca 1065
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 gcggcaagaagggcgccgcggacg 40 ||||||| |||||||||||||||| Sbjct: 5009603 gcggcaacaagggcgccgcggacg 5009626 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 tcgacccggcggcgtgggaggaca 367 ||||| |||||||||||||||||| Sbjct: 4513301 tcgacgcggcggcgtgggaggaca 4513278 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gacgctgccggcgtccgagg 130 |||||||||||||||||||| Sbjct: 3170979 gacgctgccggcgtccgagg 3170998
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 aagaagcacgccaagaacga 65 |||||||||||||||||||| Sbjct: 3045065 aagaagcacgccaagaacga 3045084
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 gaagggcgccgcggacggcaagaagaag 51 |||||||| ||||| ||||||||||||| Sbjct: 28447445 gaagggcggcgcgggcggcaagaagaag 28447472
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gacccggcggcgtgggagga 365 |||||||||||||||||||| Sbjct: 31225484 gacccggcggcgtgggagga 31225503
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0037D09 Length = 140470 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 gaagggcgccgcggacggcaagaagaag 51 |||||||| ||||| ||||||||||||| Sbjct: 13197 gaagggcggcgcgggcggcaagaagaag 13224
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0618H09 Length = 142306 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 gaagggcgccgcggacggcaagaagaag 51 |||||||| ||||| ||||||||||||| Sbjct: 4986 gaagggcggcgcgggcggcaagaagaag 5013
>dbj|AK107274.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-A03, full insert sequence Length = 1517 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 aagaagcacgccaagaacga 65 |||||||||||||||||||| Sbjct: 1046 aagaagcacgccaagaacga 1027
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cgacccggcggcgtgggagg 364 |||||||||||||||||||| Sbjct: 1575312 cgacccggcggcgtgggagg 1575293
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 aagaagaagcacgccaagaacgag 66 |||||||||| ||||||||||||| Sbjct: 1567784 aagaagaagcgcgccaagaacgag 1567761
>gb|AY552588.1| Trypanosoma cruzi clone C6:24B7 telomeric region Length = 34387 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 aaacatcgacccggcggcgt 358 |||||||||||||||||||| Sbjct: 27406 aaacatcgacccggcggcgt 27425
>dbj|AK058245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-A06, full insert sequence Length = 691 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 gaagggcgccgcggacggcaagaagaag 51 |||||||| ||||| ||||||||||||| Sbjct: 107 gaagggcggcgcgggcggcaagaagaag 134
>gb|AY110147.1| Zea mays CL377_-3 mRNA sequence Length = 620 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gacccggcggcgtgggagga 365 |||||||||||||||||||| Sbjct: 180 gacccggcggcgtgggagga 199
>emb|AL135818.3|CNS01DVH Human chromosome 14 DNA sequence BAC C-2547L24 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203777 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gggctgcccctcttcctcta 281 |||||||||||||||||||| Sbjct: 101134 gggctgcccctcttcctcta 101153
>emb|AL133153.3|CNS01DU3 Human chromosome 14 DNA sequence BAC R-895M11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 231490 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gggctgcccctcttcctcta 281 |||||||||||||||||||| Sbjct: 12700 gggctgcccctcttcctcta 12719
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 aagaagcacgccaagaacga 65 |||||||||||||||||||| Sbjct: 3054096 aagaagcacgccaagaacga 3054115 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,141,803 Number of Sequences: 3902068 Number of extensions: 3141803 Number of successful extensions: 58777 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 58205 Number of HSP's gapped (non-prelim): 567 length of query: 453 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 431 effective length of database: 17,147,199,772 effective search space: 7390443101732 effective search space used: 7390443101732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
