ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal36c18 |
|---|---|
| Clone Library Name | barley_pub |
>MYSM1_CHICK (Q5F3F2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 832 Score = 36.6 bits (83), Expect = 0.062 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = +2 Query: 395 WTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQA--NMSRRKRRS 568 WT EE F GL K G+ W I++ + SRT QV S+A++YF +A + S R+ +S Sbjct: 122 WTSEEKELFEQGLVKYGRR-WTKIAK-LIGSRTVLQVKSYARQYFKNKAKNDGSEREEQS 179 Query: 569 SLFDLVPDE 595 +P E Sbjct: 180 QHGGTLPTE 188
>MYSM1_HUMAN (Q5VVJ2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 828 Score = 36.6 bits (83), Expect = 0.062 Identities = 23/56 (41%), Positives = 30/56 (53%) Frame = +2 Query: 362 SANRERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYF 529 S + V WT EE F GL K G+ W IS+ + SRT QV S+A++YF Sbjct: 110 SPTKPASYSVKWTIEEKELFEQGLAKFGRR-WTKISK-LIGSRTVLQVKSYARQYF 163
>TERF2_HUMAN (Q15554) Telomeric repeat-binding factor 2 (TTAGGG repeat-binding| factor 2) (Telomeric DNA-binding protein) Length = 500 Score = 35.4 bits (80), Expect = 0.14 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = +2 Query: 359 SSANRERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNF-VVSRTPTQV 505 S+ N +K+ WT EE G+QK G+G+W IS+N+ V+RT + Sbjct: 440 STTNITKKQ--KWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMI 487
>MYSM1_MOUSE (Q69Z66) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 819 Score = 34.3 bits (77), Expect = 0.31 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +2 Query: 389 VPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYF 529 V WT EE F GL K G+ W I+ + SRT QV S+A++YF Sbjct: 116 VKWTVEEKELFEQGLAKFGRR-WTKIA-TLLKSRTVLQVKSYARQYF 160
>APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2| (Pseudo-response regulator 2) (TOC2 protein) Length = 535 Score = 33.9 bits (76), Expect = 0.40 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Frame = +2 Query: 362 SANRERKKGVPWTEEEHRRFLLGLQKLGKGD---WRGISRNFVVSRTPTQVASHAQKYFI 532 S N+ +K V WT E H++F+ +++LG R + V + T VASH QK+ Sbjct: 290 SGNKTSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQ 349 Query: 533 RQANM 547 + N+ Sbjct: 350 HRKNI 354
>ARR21_ARATH (Q9LYP5) Putative two-component response regulator ARR21| Length = 592 Score = 33.9 bits (76), Expect = 0.40 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Frame = +2 Query: 326 GYASDDFVQGSSSANRERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNF-----VVSR 490 G SDD G S + +KK + WT+ H FL ++ +G + + + V Sbjct: 207 GGPSDD---GESMSQPAKKKKIQWTDSLHDLFLQAIRHIGLD--KAVPKKILAFMSVPYL 261 Query: 491 TPTQVASHAQKYFIRQANMSRRKRRSSLFDLVPD 592 T VASH QKY I RR L+ ++ D Sbjct: 262 TRENVASHLQKYRI----FLRRVAEQGLYSMLSD 291
>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-like protein) (Atrophin-1-related protein) Length = 1566 Score = 33.5 bits (75), Expect = 0.52 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 19/83 (22%) Frame = +2 Query: 380 KKGVP------WTEEEHRRFLLGLQKLGKGDWR-------------GISRNFVVSRTPTQ 502 KK VP WTE+E +RF+ GL++ GK +R I+ + +TP Sbjct: 385 KKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEA 444 Query: 503 VASHAQKYFIRQANMSRRKRRSS 571 +S A + RQA R K R++ Sbjct: 445 ASSRAHRRHRRQAVFRRIKTRTA 467
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 33.5 bits (75), Expect = 0.52 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 19/83 (22%) Frame = +2 Query: 380 KKGVP------WTEEEHRRFLLGLQKLGKGDWR-------------GISRNFVVSRTPTQ 502 KK VP WTE+E +RF+ GL++ GK +R I+ + +TP Sbjct: 385 KKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPSKETGELITFYYYWKKTPEA 444 Query: 503 VASHAQKYFIRQANMSRRKRRSS 571 +S A + RQA R K R++ Sbjct: 445 ASSRAHRRHRRQAVFRRIKTRTA 467
>LAMB3_MOUSE (Q61087) Laminin beta-3 chain precursor (Laminin 5 beta 3) (Kalinin| B1 chain) Length = 1168 Score = 33.5 bits (75), Expect = 0.52 Identities = 19/60 (31%), Positives = 26/60 (43%) Frame = +2 Query: 35 TTLRFSSQPTSPLPFRRATPAGALAAPGMTRRCSHCSYNGHNSRTCPNRGVKIFGVRLTD 214 T LR + +P+P R + P A A R C +GH R PN G VR+ + Sbjct: 215 TNLRVNFTKLAPVPQRGSYPPSAYFAVSQLRLQGSCFCHGHADRCAPNPGGSTTAVRVNN 274
>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-related protein) Length = 1559 Score = 33.5 bits (75), Expect = 0.52 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 19/83 (22%) Frame = +2 Query: 380 KKGVP------WTEEEHRRFLLGLQKLGKGDWR-------------GISRNFVVSRTPTQ 502 KK VP WTE+E +RF+ GL++ GK +R I+ + +TP Sbjct: 384 KKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEA 443 Query: 503 VASHAQKYFIRQANMSRRKRRSS 571 +S A + RQA R K R++ Sbjct: 444 ASSRAHRRHRRQAVFRRIKTRTA 466
>TERF2_MOUSE (O35144) Telomeric repeat-binding factor 2 (TTAGGG repeat-binding| factor 2) (Telomeric DNA-binding protein) Length = 495 Score = 33.1 bits (74), Expect = 0.68 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Frame = +2 Query: 356 SSSANRERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNF-VVSRTPTQV 505 SSS R++K WT EE G++K G+G+W IS+++ V+RT + Sbjct: 436 SSSLTRKQK----WTIEESEWVKDGVRKYGEGNWAAISKSYPFVNRTAVMI 482
>CHD1_YEAST (P32657) Chromo domain protein 1 (EC 3.6.1.-) (ATP-dependent helicase| CHD1) Length = 1468 Score = 31.6 bits (70), Expect = 2.0 Identities = 19/68 (27%), Positives = 30/68 (44%) Frame = +2 Query: 395 WTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQANMSRRKRRSSL 574 WT+EE + L+G+ K G G W I + + T K F+ + + K+ +S Sbjct: 1175 WTKEEDEKLLIGVFKYGYGSWTQIRDDPFLGIT--------DKIFLNEVHNPVAKKSASS 1226 Query: 575 FDLVPDES 598 D P S Sbjct: 1227 SDTTPTPS 1234
>LMO6_HUMAN (O43900) LIM domain only protein 6 (Triple LIM domain protein 6)| Length = 615 Score = 27.7 bits (60), Expect(2) = 2.1 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +2 Query: 53 SQPTSPLPFRRATPAGALAAPGMTRRCSHCSYNGHNSRT 169 S+PT+P P RR+ AG + AP S + G + T Sbjct: 370 SEPTAPGPSRRSWSAGPVTAPLAASTASFSAVKGASETT 408 Score = 22.3 bits (46), Expect(2) = 2.1 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +1 Query: 172 PQPRGQDLRGAPHRWIHPQ 228 P+ + LRGAPHR P+ Sbjct: 422 PEEPSRFLRGAPHRHSMPE 440
>HFW1_DROME (Q9W568) Protein halfway precursor (Protein singed wings)| Length = 611 Score = 31.2 bits (69), Expect = 2.6 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +1 Query: 151 RPQLADVPQPRGQDLRGAPHRWIHPQERQH 240 RP++A P P PH HPQ R H Sbjct: 23 RPEIAHTPDPAALGEESTPHAHAHPQARHH 52
>MYB4_ORYSA (Q7XBH4) Myb-related protein Myb4 (OsMyb4) (Transcription factor| RLTR1) Length = 257 Score = 31.2 bits (69), Expect = 2.6 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 380 KKGVPWTEEEHRRFLLGLQKLGKGDWRGISR 472 KKG PWT EE + + +Q+ G G+WR + + Sbjct: 13 KKG-PWTPEEDKVLVAHIQRHGHGNWRALPK 42
>ADA2_HUMAN (O75478) Transcriptional adapter 2-like (ADA2-like protein)| Length = 443 Score = 31.2 bits (69), Expect = 2.6 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 8/82 (9%) Frame = +2 Query: 395 WTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQ-------ANMSR 553 WT +E L + G G+W+ ++ N + ++T + H K+FI N+ + Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQ 133 Query: 554 RKRRSSLFDLVPDES-DLPPLP 616 + + +P S D PP P Sbjct: 134 AEEAKTADTAIPFHSTDDPPRP 155
>ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Receiver-like| protein 3) Length = 521 Score = 30.4 bits (67), Expect = 4.4 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = +2 Query: 350 QGSSSANRERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTP----TQVASHA 517 + S++ +K V W+ E H +F+ + ++G G + + P VASH Sbjct: 183 ESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHL 242 Query: 518 QKYFIRQANMSRRK 559 QKY + + + + K Sbjct: 243 QKYRLYLSRLEKGK 256
>YD3A_SCHPO (Q10274) Hypothetical protein C13G7.10 in chromosome I| Length = 390 Score = 30.4 bits (67), Expect = 4.4 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 7/74 (9%) Frame = +2 Query: 305 GHDAAAEGYASDDFVQGSSSANRE----RKKGVPWTEEEHRRFLLGLQKLGKGDWRGI-- 466 G AAE + + Q R+ RK V WTE+E L G Q G G+W+ I Sbjct: 24 GSILAAENPSKREVAQDVPGFERKPTKVRKPRVKWTEKETNDLLRGCQIHGVGNWKKILL 83 Query: 467 -SRNFVVSRTPTQV 505 R +R+P + Sbjct: 84 DERFHFTNRSPNDL 97
>GAM1_ORYSA (P93417) Transcription factor GAMYB (OsGAMyb)| Length = 553 Score = 30.4 bits (67), Expect = 4.4 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Frame = +2 Query: 299 DVGHDAAAEGYASDDFVQGSSSANRER------KKGVPWTEEEHRRFLLGLQKLGKGDWR 460 D+ H + +DD GSS + R KKG PWT E + ++K G+G+W Sbjct: 11 DMIHQEQMDSPVADD---GSSGGSPHRGGGPPLKKG-PWTSAEDAILVDYVKKHGEGNWN 66 Query: 461 GISRN 475 + +N Sbjct: 67 AVQKN 71
>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV) (Restin) (Related to endostatin)] Length = 1388 Score = 30.0 bits (66), Expect = 5.8 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 9/53 (16%) Frame = +1 Query: 109 GSGDDEAVLALQLQRPQL------ADVPQPRGQDL---RGAPHRWIHPQERQH 240 G GD+E + A + P + + P P G L AP RWI P +R+H Sbjct: 502 GPGDEEDLAAATTEEPLITAGGEESGSPPPDGPPLPLPTVAPERWITPAQREH 554
>LAMA1_HUMAN (P25391) Laminin alpha-1 chain precursor (Laminin A chain)| Length = 3075 Score = 30.0 bits (66), Expect = 5.8 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +2 Query: 38 TLRFSSQPTSPLPFRRATPAGALAAPG-MTRRCSHCSYNGHNSRTCPNRG 184 T+ FS Q +P R PAG+ P + C CS N H+ PN G Sbjct: 1368 TVGFSCQDCAPGYHRGKLPAGSDRGPRPLVAPCVPCSCNNHSDTCDPNTG 1417
>ZCH12_MOUSE (Q9CZA5) Zinc finger CCHC domain-containing protein 12| (Smad-interacting zinc finger protein) Length = 402 Score = 30.0 bits (66), Expect = 5.8 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 122 TRRCSHCSYNGHNSRTCPNRGVK 190 T CSHC GH+ TC N K Sbjct: 345 TIHCSHCGEEGHSKETCDNESDK 367
>MYBB_HUMAN (P10244) Myb-related protein B (B-Myb)| Length = 700 Score = 30.0 bits (66), Expect = 5.8 Identities = 16/58 (27%), Positives = 27/58 (46%) Frame = +2 Query: 371 RERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQAN 544 R+ K V WT EE + +++ G+ DW+ F+ S P + Q ++R N Sbjct: 26 RDSKCKVKWTHEEDEQLRALVRQFGQQDWK-----FLASHFPNRTDQQCQYRWLRVLN 78
>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing| mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) Length = 2472 Score = 29.6 bits (65), Expect = 7.6 Identities = 22/63 (34%), Positives = 31/63 (49%) Frame = +2 Query: 350 QGSSSANRERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYF 529 Q S A+ E + WTEEE GL + G+ +W I+R V S+T +Q + Y Sbjct: 596 QSSELASMEMNESSRWTEEEMETAKKGLLEHGR-NWSAIAR-MVGSKTVSQCKNFYFNYK 653 Query: 530 IRQ 538 RQ Sbjct: 654 KRQ 656
>MYB1_NEUCR (O13493) Myb-like DNA binding protein myb-1| Length = 324 Score = 29.6 bits (65), Expect = 7.6 Identities = 14/43 (32%), Positives = 28/43 (65%) Frame = +2 Query: 374 ERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQ 502 ++++G PW+ E +R + ++ LG G+W ++R + +RTP Q Sbjct: 6 DQRRG-PWSAGEDQRLIKLVKDLGPGNWVNVAR-ILGTRTPKQ 46
>ARR19_ARATH (Q9M9B9) Putative two-component response regulator ARR19| Length = 407 Score = 29.6 bits (65), Expect = 7.6 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 14/74 (18%) Frame = +2 Query: 353 GSSSANRERKKG-------VPWTEEEHRRFLLGLQKLG-------KGDWRGISRNFVVSR 490 G+ N E+K+G + WTEE H++FL ++ +G K + + Sbjct: 199 GNGIQNMEKKQGKKPRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGI 258 Query: 491 TPTQVASHAQKYFI 532 T + VASH QK+ I Sbjct: 259 TRSNVASHLQKHRI 272
>ZCH12_HUMAN (Q6PEW1) Zinc finger CCHC domain-containing protein 12| Length = 402 Score = 29.6 bits (65), Expect = 7.6 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 122 TRRCSHCSYNGHNSRTCPNRGVK 190 T RCS+C GH+ TC N K Sbjct: 344 TIRCSYCGEEGHSKETCDNESDK 366
>ARR10_ARATH (O49397) Two-component response regulator ARR10 (Receiver-like| protein 4) Length = 552 Score = 29.3 bits (64), Expect = 9.9 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = +2 Query: 374 ERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNF-----VVSRTPTQVASHAQKYFIRQ 538 ++K V WT E H +FL + LG R + + V T VASH QK+ + Sbjct: 181 QKKPRVLWTHELHNKFLAAVDHLGVE--RAVPKKILDLMNVDKLTRENVASHLQKFRVAL 238 Query: 539 ANMS 550 +S Sbjct: 239 KKVS 242
>MYBB_MOUSE (P48972) Myb-related protein B (B-Myb)| Length = 704 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/58 (25%), Positives = 27/58 (46%) Frame = +2 Query: 371 RERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQAN 544 R+ + V WT EE + +++ G+ DW+ F+ S P + Q ++R N Sbjct: 26 RDNRCKVKWTHEEDEQLRALVRQFGQQDWK-----FLASHFPNRTDQQCQYRWLRVLN 78
>MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)| Length = 686 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/58 (25%), Positives = 28/58 (48%) Frame = +2 Query: 371 RERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQAN 544 R+ + V WT+EE + + ++ G+ DW+ F+ S P + Q ++R N Sbjct: 26 RDGRCKVKWTQEEDEQLKMLVRHYGQNDWK-----FLASHFPNRSDQQCQYRWLRVLN 78
>ZCH12_RAT (Q5HZA3) Zinc finger CCHC domain-containing protein 12| Length = 401 Score = 29.3 bits (64), Expect = 9.9 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +2 Query: 122 TRRCSHCSYNGHNSRTCPN 178 T CSHC GH+ TC N Sbjct: 344 TVHCSHCGEEGHSKETCDN 362
>MYB21_ARATH (Q9LK95) Transcription factor MYB21 (Myb-related protein 21)| (AtMYB21) (Myb homolog 3) (AtMyb3) Length = 226 Score = 29.3 bits (64), Expect = 9.9 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +2 Query: 359 SSANRERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRT 493 SSA E +KG PWT EE + + G G W ++++ + RT Sbjct: 14 SSAEAEVRKG-PWTMEEDLILINYIANHGDGVWNSLAKSAGLKRT 57
>SSBP4_HUMAN (Q9BWG4) Single-stranded DNA-binding protein 4| Length = 385 Score = 29.3 bits (64), Expect = 9.9 Identities = 21/63 (33%), Positives = 27/63 (42%) Frame = +2 Query: 38 TLRFSSQPTSPLPFRRATPAGALAAPGMTRRCSHCSYNGHNSRTCPNRGVKIFGVRLTDG 217 TLR SQP + LP + GA+ R H S G R P RG+ G + G Sbjct: 159 TLRMPSQPPAGLPGSQPLLPGAMEP--SPRAQGHPSMGGPMQRVTPPRGMASVGPQSYGG 216 Query: 218 SIR 226 +R Sbjct: 217 GMR 219
>MYBB_XENLA (P52551) Myb-related protein B (B-Myb) (Myb-related protein 1)| (XMYB1) Length = 743 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 371 RERKKGVPWTEEEHRRFLLGLQKLGKGDWRGISRN 475 +E + V WT EE ++K G+G+W+ I+ N Sbjct: 26 KENRVKVKWTPEEDETLKALVKKHGQGEWKTIASN 60
>AIR1_YEAST (P40507) Protein AIR1 (Arginine methyltransferase-interacting RING| finger protein 1) Length = 360 Score = 29.3 bits (64), Expect = 9.9 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +2 Query: 131 CSHCSYNGHNSRTCPNRGVKIF 196 C++C+ NGH CP++ K+F Sbjct: 114 CTNCNANGHYKSQCPHKWKKVF 135
>MPA5A_LOLPR (Q40240) Major pollen allergen Lol p 5a precursor (Lol p Va) (Lol p| Ib) Length = 308 Score = 29.3 bits (64), Expect = 9.9 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 12/60 (20%) Frame = +2 Query: 50 SSQPTSPLPFRRATPAGALAAPGMTRRC------------SHCSYNGHNSRTCPNRGVKI 193 SS+P SP P R ++P A APG+ + +H R CP+R +++ Sbjct: 86 SSRPPSPSPPRASSPTSAAKAPGLIPKLDTAYDVAYKAAEAHPRGQVRRLRHCPHRSLRV 145
>BIK1_YEAST (P11709) Nuclear fusion protein BIK1| Length = 440 Score = 29.3 bits (64), Expect = 9.9 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +2 Query: 92 PAGALAAPGMTRRCSHCSYNGHNSRTCPN 178 PA G + C HC GHN+ CP+ Sbjct: 403 PAPVDTTAGRQQWCEHCDTMGHNTAECPH 431 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,299,302 Number of Sequences: 219361 Number of extensions: 1428088 Number of successful extensions: 4839 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4608 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4837 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
