Clone Information

BLAST Search Result

Clone Name	baal35n16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MYSM1_CHICK (Q5F3F2) Protein MYSM1 (Myb-like, SWIRM and MPN doma...	53	5e-07
2	MYSM1_HUMAN (Q5VVJ2) Protein MYSM1 (Myb-like, SWIRM and MPN doma...	51	2e-06
3	MYSM1_MOUSE (Q69Z66) Protein MYSM1 (Myb-like, SWIRM and MPN doma...	49	1e-05
4	SMCL_ARATH (Q8VY05) Putative SWI/SNF-related matrix-associated a...	45	2e-04
5	RCOR2_BRARE (Q6P116) REST corepressor 2	42	0.001
6	RCOR1_HUMAN (Q9UKL0) REST corepressor 1 (Protein CoREST)	41	0.003
7	RCOR1_MOUSE (Q8CFE3) REST corepressor 1 (Protein CoREST)	41	0.003
8	SMRC2_MOUSE (Q6PDG5) SWI/SNF-related matrix-associated actin-dep...	40	0.005
9	SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dep...	40	0.005
10	RCOR2_HUMAN (Q8IZ40) REST corepressor 2	40	0.005
11	RCOR2_RAT (Q5FWT8) REST corepressor 2	39	0.010
12	RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)	39	0.010
13	SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dep...	38	0.017
14	SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dep...	38	0.017
15	RCOR1_XENLA (Q90WN5) REST corepressor 1 (Protein CoREST) (xCoREST)	38	0.017
16	YEPA_SCHPO (O14470) Putative chromatin regulator protein C23H3.10	38	0.017
17	NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-...	37	0.030
18	MYBH_DICDI (P34127) Myb-like protein (Fragment)	37	0.030
19	NCOR1_HUMAN (O75376) Nuclear receptor corepressor 1 (N-CoR1) (N-...	37	0.039
20	BAS1_YEAST (P22035) Myb-like DNA-binding protein BAS1	35	0.11
21	RCOR2_XENLA (Q6NRZ0) REST corepressor 2	35	0.15
22	RCOR3_HUMAN (Q9P2K3) REST corepressor 3	35	0.15
23	NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Si...	35	0.15
24	NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Si...	35	0.19
25	ARR19_ARATH (Q9M9B9) Putative two-component response regulator A...	35	0.19
26	CDC5L_RAT (O08837) Cell division cycle 5-related protein (Cdc5-l...	34	0.33
27	CDC5L_MOUSE (Q6A068) Cell division cycle 5-related protein (Cdc5...	34	0.33
28	CDC5L_HUMAN (Q99459) Cell division cycle 5-like protein (Cdc5-li...	34	0.33
29	CEF1_CANAL (Q5APG6) Pre-mRNA-splicing factor CEF1	34	0.33
30	RSC8_YEAST (P43609) Chromatin structure remodeling complex prote...	33	0.56
31	CEF1_YARLI (Q6C8F5) Pre-mRNA-splicing factor CEF1	33	0.56
32	TAZ1_SCHPO (P79005) Telomere length regulator taz1	33	0.73
33	MYBA_MOUSE (P51960) Myb-related protein A (A-Myb)	32	0.96
34	MYBA_HUMAN (P10243) Myb-related protein A (A-Myb)	32	0.96
35	YD3A_SCHPO (Q10274) Hypothetical protein C13G7.10 in chromosome I	32	0.96
36	CEF1_DEBHA (Q6BLT3) Pre-mRNA-splicing factor CEF1	32	0.96
37	CEF1_EMENI (Q5AW35) Pre-mRNA-splicing factor cef1	32	1.3
38	CEF1_SCHPO (P39964) Pre-mRNA-splicing factor cef1 (Cell division...	32	1.3
39	CEF1_ASPFU (Q4WHG0) Pre-mRNA-splicing factor cef1	32	1.3
40	YMA9_CAEEL (P34454) Hypothetical protein F54F2.9	32	1.6
41	MYBB_HUMAN (P10244) Myb-related protein B (B-Myb)	32	1.6
42	MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)	32	1.6
43	MYBB_MOUSE (P48972) Myb-related protein B (B-Myb)	32	1.6
44	MYB98_ARATH (Q9S7L2) Transcription factor MYB98 (Myb-related pro...	31	2.1
45	SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 ...	31	2.8
46	CB013_HUMAN (Q8IW19) Protein C2orf13	31	2.8
47	CEF1_MAGGR (Q52G60) Pre-mRNA-splicing factor CEF1	31	2.8
48	MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-r...	31	2.8
49	APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2...	31	2.8
50	CASQ2_MOUSE (O09161) Calsequestrin-2 precursor (Calsequestrin, c...	31	2.8
51	MYB_XENLA (Q08759) Myb protein	31	2.8
52	MYBB_XENLA (P52551) Myb-related protein B (B-Myb) (Myb-related p...	30	3.6
53	MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)	30	3.6
54	MB3R1_ARATH (Q9S7G7) Myb-related protein 3R-1 (Plant c-MYB-like ...	30	3.6
55	MYBA_CHICK (P52550) Myb-related protein A (A-Myb)	30	3.6
56	MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)	30	3.6
57	MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)	30	3.6
58	DZIP1_MOUSE (Q8BMD2) Zinc finger protein DZIP1 (DAZ-interacting ...	30	3.6
59	MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)	30	3.6
60	RCOR_CAEEL (Q18919) REST corepressor spr-1 (CoREST) (Suppressor ...	30	4.8
61	MYB_AVIMB (P01104) Transforming protein Myb	30	4.8
62	CEF1_USTMA (Q4P652) Pre-mRNA-splicing factor CEF1	30	6.2
63	CEF1_CRYNE (Q5K9L1) Pre-mRNA-splicing factor CEF1	30	6.2
64	CEF1_NEUCR (Q7SAF6) Pre-mRNA-splicing factor cef-1	30	6.2
65	SYR_OCEIH (Q8EM45) Arginyl-tRNA synthetase (EC 6.1.1.19) (Argini...	30	6.2
66	ABP1_YEAST (P15891) Actin-binding protein	29	8.1
67	MIER1_CHICK (Q5ZKT9) Mesoderm induction early response protein 1...	29	8.1

>MYSM1_CHICK (Q5F3F2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing|
           protein 1)
          Length = 832

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 22/56 (39%), Positives = 37/56 (66%)
 Frame = +3

Query: 93  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPGAKIE 260
           KWT EE E F + L  YGR W +I + IG++T +Q++S+A+++F    +  G++ E
Sbjct: 121 KWTSEEKELFEQGLVKYGRRWTKIAKLIGSRTVLQVKSYARQYFKNKAKNDGSERE 176

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>MYSM1_HUMAN (Q5VVJ2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing|
           protein 1)
          Length = 828

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 26/76 (34%), Positives = 45/76 (59%)
 Frame = +3

Query: 12  AMQPNEEGMGEHPVKPRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTA 191
           ++Q   + M   P KP   Y++     KWT EE E F + L  +GR W +I + IG++T 
Sbjct: 99  SLQKTAKIMVHSPTKPAS-YSV-----KWTIEEKELFEQGLAKFGRRWTKISKLIGSRTV 152

Query: 192 VQIRSHAQKFFSKVVR 239
           +Q++S+A+++F   V+
Sbjct: 153 LQVKSYARQYFKNKVK 168

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>MYSM1_MOUSE (Q69Z66) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing|
           protein 1)
          Length = 819

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 23/76 (30%), Positives = 42/76 (55%)
 Frame = +3

Query: 12  AMQPNEEGMGEHPVKPRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTA 191
           ++Q + + M + P KP           KWT EE E F + L  +GR W +I   + ++T 
Sbjct: 96  SLQKSSKAMVDSPAKP------ASHSVKWTVEEKELFEQGLAKFGRRWTKIATLLKSRTV 149

Query: 192 VQIRSHAQKFFSKVVR 239
           +Q++S+A+++F   V+
Sbjct: 150 LQVKSYARQYFKNKVK 165

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>SMCL_ARATH (Q8VY05) Putative SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member (AtSwi3C)
          Length = 985

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +3

Query: 93  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 209
           KWTD+E    LEAL+++  +W +I EH+ TKT  Q   H
Sbjct: 366 KWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLH 404

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>RCOR2_BRARE (Q6P116) REST corepressor 2|
          Length = 536

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
 Frame = +3

Query: 24  NEEGMGEHPVKPRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIR 203
           N  G G   ++PR+P    K   +WT EE    ++A++ YG+ +  I + IG KT  Q+ 
Sbjct: 311 NNLGDGIEDMRPREPNQ--KINSRWTTEEQLLAVQAVRRYGKDFAAIADVIGNKTVAQVS 368

Query: 204 ----SHAQKF-FSKVVREPGAKIEIE 266
               S+ ++F   +V+RE  A+ E++
Sbjct: 369 SFFVSYRRRFNLEEVLREWQAEQEVQ 394

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>RCOR1_HUMAN (Q9UKL0) REST corepressor 1 (Protein CoREST)|
          Length = 482

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = +3

Query: 60  RKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 206
           R P  I K   +WT EE    ++A++ YGR ++ I + IG K+ VQ+++
Sbjct: 371 RLPEVIQKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKN 419

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>RCOR1_MOUSE (Q8CFE3) REST corepressor 1 (Protein CoREST)|
          Length = 477

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = +3

Query: 60  RKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 206
           R P  I K   +WT EE    ++A++ YGR ++ I + IG K+ VQ+++
Sbjct: 365 RLPEVIQKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKN 413

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>SMRC2_MOUSE (Q6PDG5) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 2 (SWI/SNF
           complex 170 kDa subunit) (BRG1-associated factor 170)
          Length = 1213

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 57  PRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKT 188
           P K         +WT++E    LEAL++Y   W ++ EH+G++T
Sbjct: 588 PSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 631

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>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 2 (SWI/SNF
           complex 170 kDa subunit) (BRG1-associated factor 170)
          Length = 1214

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 57  PRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKT 188
           P K         +WT++E    LEAL++Y   W ++ EH+G++T
Sbjct: 588 PSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 631

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>RCOR2_HUMAN (Q8IZ40) REST corepressor 2|
          Length = 523

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
 Frame = +3

Query: 39  GEHPVKPRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIR----S 206
           G  P++P  P   TK   +WT +E    ++A++ YG+ +  I E IG KT  Q++    S
Sbjct: 315 GIDPLRP--PEANTKFNSRWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKTFFVS 372

Query: 207 HAQKF-FSKVVRE--------PGAKIEIE 266
           + ++F   +V++E        PGA + +E
Sbjct: 373 YRRRFNLEEVLQEWEAEQDGAPGAPVPME 401

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>RCOR2_RAT (Q5FWT8) REST corepressor 2|
          Length = 523

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +3

Query: 39  GEHPVKPRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 206
           G  P++P  P   TK   +WT +E    ++A++ YG+ +  I E IG KT  Q+++
Sbjct: 315 GIDPLRP--PEANTKFNSRWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKT 368

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>RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)|
          Length = 523

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +3

Query: 39  GEHPVKPRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 206
           G  P++P  P   TK   +WT +E    ++A++ YG+ +  I E IG KT  Q+++
Sbjct: 315 GIDPLRP--PEANTKFNSRWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKT 368

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>SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 1 (SWI/SNF
           complex 155 kDa subunit) (BRG1-associated factor 155)
           (SWI3-related protein)
          Length = 1104

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +3

Query: 93  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKT 188
           +WT++E    LEAL++Y   W ++ EH+G++T
Sbjct: 621 EWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 652

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>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 1 (SWI/SNF
           complex 155 kDa subunit) (BRG1-associated factor 155)
          Length = 1105

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 13/32 (40%), Positives = 23/32 (71%)
 Frame = +3

Query: 93  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKT 188
           +WT++E    LEAL++Y   W ++ EH+G++T
Sbjct: 622 EWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 653

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>RCOR1_XENLA (Q90WN5) REST corepressor 1 (Protein CoREST) (xCoREST)|
          Length = 431

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 15/42 (35%), Positives = 28/42 (66%)
 Frame = +3

Query: 81  KQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 206
           K   +WT EE    ++A+++YGR ++ I + IG K+ VQ+++
Sbjct: 327 KFNARWTTEEQLLAVQAIRMYGRDFQAISDVIGNKSVVQVKN 368

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>YEPA_SCHPO (O14470) Putative chromatin regulator protein C23H3.10|
          Length = 503

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 209
           + + W+++E    LEA++ YG  W QI  H+G++T  Q   H
Sbjct: 246 EEKPWSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIH 287

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>NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Retinoid|
           X receptor-interacting protein 13) (RIP13)
          Length = 2453

 Score = 37.4 bits (85), Expect = 0.030
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = +3

Query: 6   DVAMQPNEEGMGEHPVKPRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTK 185
           + A    EE     P  P    T   +  +WT+EE E   + L  +GR+W  I + +GTK
Sbjct: 597 NAAAAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTK 656

Query: 186 TAVQIRS 206
           +  Q ++
Sbjct: 657 SEAQCKN 663

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>MYBH_DICDI (P34127) Myb-like protein (Fragment)|
          Length = 451

 Score = 37.4 bits (85), Expect = 0.030
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 81  KQREKWTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIRSHAQK 218
           K + KWT EE +  ++A+ L+  ++W++I EH   +T VQ     QK
Sbjct: 147 KTKGKWTSEEDQILIKAVNLHNQKNWKKIAEHFPDRTDVQCHHRYQK 193



 Score = 30.8 bits (68), Expect = 2.8
 Identities = 12/50 (24%), Positives = 26/50 (52%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKV 233
           ++E W+DEE +   +   ++G  W +I + +  +T   I++H      +V
Sbjct: 252 KKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKRV 301



 Score = 29.6 bits (65), Expect = 6.2
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 96  WTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIR 203
           WT +E +K +E +K YG + W  I  H+  +   Q R
Sbjct: 204 WTKDEDDKVIELVKTYGPKKWSDIALHLKGRMGKQCR 240

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>NCOR1_HUMAN (O75376) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR)|
          Length = 2440

 Score = 37.0 bits (84), Expect = 0.039
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = +3

Query: 12  AMQPNEEGMGEHPVKPRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTA 191
           A    EE     P  P    T   +  +WT+EE E   + L  +GR+W  I + +GTK+ 
Sbjct: 600 AAAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSE 659

Query: 192 VQIRS 206
            Q ++
Sbjct: 660 AQCKN 664

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>BAS1_YEAST (P22035) Myb-like DNA-binding protein BAS1|
          Length = 811

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +3

Query: 93  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPGAKI 257
           +WT EE    +  +K YG  WR+I   +  + ++  R+  +K  + VVR   +++
Sbjct: 171 EWTLEEDLNLISKVKAYGTKWRKISSEMEFRPSLTCRNRWRKIITMVVRGQASEV 225

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>RCOR2_XENLA (Q6NRZ0) REST corepressor 2|
          Length = 503

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +3

Query: 60  RKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 206
           R P    K   +WT +E    ++A++ YG+ ++ I E +G KT  Q+++
Sbjct: 320 RPPELNIKLNARWTTDEQLLAVQAVRKYGKDFQAISEVLGNKTPSQVKT 368

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>RCOR3_HUMAN (Q9P2K3) REST corepressor 3|
          Length = 495

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 21/68 (30%), Positives = 37/68 (54%)
 Frame = +3

Query: 3   VDVAMQPNEEGMGEHPVKPRKPYTITKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGT 182
           V+ A++   EG G    KP  P +  K   +WT EE    ++ ++ YG+ ++ I + IG 
Sbjct: 262 VNSALKQKMEG-GIEEFKP--PESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGN 318

Query: 183 KTAVQIRS 206
           KT  Q+++
Sbjct: 319 KTVGQVKN 326

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>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing|
           mediator of retinoic acid and thyroid hormone receptor)
           (SMRT) (SMRTe) (Thyroid-,
           retinoic-acid-receptor-associated corepressor) (T3
           receptor-associating factor) (TRAC) (CTG repeat p
          Length = 2517

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = +3

Query: 30  EGMGEHPVKPRKPYTITK----QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQ 197
           E   E  + P++   +      +  +WT+EE E   + L  +GR+W  I   +G+KT  Q
Sbjct: 589 EANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQ 648

Query: 198 IRS 206
            ++
Sbjct: 649 CKN 651

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>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing|
           mediator of retinoic acid and thyroid hormone receptor)
           (SMRT) (SMRTe) (Thyroid-,
           retinoic-acid-receptor-associated corepressor) (T3
           receptor-associating factor) (TRAC)
          Length = 2472

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 206
           +  +WT+EE E   + L  +GR+W  I   +G+KT  Q ++
Sbjct: 607 ESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKN 647

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>ARR19_ARATH (Q9M9B9) Putative two-component response regulator ARR19|
          Length = 407

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 16/31 (51%), Positives = 21/31 (67%)
 Frame = +3

Query: 54  KPRKPYTITKQREKWTDEEHEKFLEALKLYG 146
           KPRKP      R  WT+E H+KFLEA+++ G
Sbjct: 212 KPRKP------RMTWTEELHQKFLEAIEIIG 236

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>CDC5L_RAT (O08837) Cell division cycle 5-related protein (Cdc5-like protein)|
           (Pombe Cdc5-related protein)
          Length = 802

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVR 239
           ++ +W+ EE EK L   KL    WR I   IG +TA Q   H +    K  +
Sbjct: 59  KKTEWSREEEEKLLHLAKLMPTQWRTIAPIIG-RTAAQCLEHYEFLLDKTAQ 109

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>CDC5L_MOUSE (Q6A068) Cell division cycle 5-related protein (Cdc5-like protein)|
          Length = 802

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVR 239
           ++ +W+ EE EK L   KL    WR I   IG +TA Q   H +    K  +
Sbjct: 59  KKTEWSREEEEKLLHLAKLMPTQWRTIAPIIG-RTAAQCLEHYEFLLDKTAQ 109

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>CDC5L_HUMAN (Q99459) Cell division cycle 5-like protein (Cdc5-like protein)|
           (Pombe cdc5-related protein)
          Length = 802

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVR 239
           ++ +W+ EE EK L   KL    WR I   IG +TA Q   H +    K  +
Sbjct: 59  KKTEWSREEEEKLLHLAKLMPTQWRTIAPIIG-RTAAQCLEHYEFLLDKAAQ 109

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>CEF1_CANAL (Q5APG6) Pre-mRNA-splicing factor CEF1|
          Length = 610

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 96  WTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 230
           WT EE EK L   K++   WR I  +I  +TAVQ     QK   +
Sbjct: 64  WTKEEDEKLLNLHKIFPNQWRSI-SNILNRTAVQCVERYQKLIDE 107

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>RSC8_YEAST (P43609) Chromatin structure remodeling complex protein RSC8|
           (Remodel the structure of chromatin complex subunit 8)
           (SWI3 homolog)
          Length = 557

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = +3

Query: 87  REKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 242
           ++ W+D+E    LE +++Y   W +I +H+G    V+     +KF S  + +
Sbjct: 312 KKNWSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVE--DCIEKFLSLPIED 361

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>CEF1_YARLI (Q6C8F5) Pre-mRNA-splicing factor CEF1|
          Length = 719

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +3

Query: 78  TKQREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 242
           T ++ +W+ EE EK L   K++   WR I   +G +TA Q     ++  ++V  E
Sbjct: 55  TIKKIEWSREEDEKLLHLAKIFPAQWRTIAPFVG-RTAHQCIQRYERLLAEVAGE 108

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>TAZ1_SCHPO (P79005) Telomere length regulator taz1|
          Length = 663

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 66  PYTITKQREKWTDEEHEKFLEALKLYGRSWRQI 164
           PY   + R KWTDEE  +  E +  +G  W +I
Sbjct: 551 PYEGYRTRRKWTDEEENELYEMISQHGCCWSKI 583

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>MYBA_MOUSE (P51960) Myb-related protein A (A-Myb)|
          Length = 751

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPG 248
           ++  WT+EE     EA K  G  W +I + +  +T   I++H      + V + G
Sbjct: 138 KKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEG 192

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>MYBA_HUMAN (P10243) Myb-related protein A (A-Myb)|
          Length = 752

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPG 248
           ++  WT+EE     EA K  G  W +I + +  +T   I++H      + V + G
Sbjct: 138 KKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEG 192

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>YD3A_SCHPO (Q10274) Hypothetical protein C13G7.10 in chromosome I|
          Length = 390

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
 Frame = +3

Query: 45  HPVKPRK-PYTI------TKQREKWTDEEHEKFLEALKLYGRSWRQIQEH----IGTKTA 191
           H  +P+K P+T+       K+R+++T EE E+ LE   L+G  W +I +     +  + +
Sbjct: 119 HMGRPQKIPHTVGLSKSTRKERKQFTPEEDERLLEGFFLHGPCWTRISKDANLGLQNRRS 178

Query: 192 VQIRSHAQKFFSKVVREPGAKIE 260
             +R   +  F +     G K++
Sbjct: 179 TDLRDRFRNAFPERYAAAGFKLK 201



 Score = 30.8 bits (68), Expect = 2.8
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 60  RKPYTITKQREKWTDEEHEKFLEALKLYG-RSWRQI 164
           RKP  + K R KWT++E    L   +++G  +W++I
Sbjct: 46  RKPTKVRKPRVKWTEKETNDLLRGCQIHGVGNWKKI 81

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>CEF1_DEBHA (Q6BLT3) Pre-mRNA-splicing factor CEF1|
          Length = 668

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = +3

Query: 87  REKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQK 218
           + +WT EE EK L   KL    WR I   IG +TA       QK
Sbjct: 60  KSEWTREEDEKLLSLAKLLPNQWRSIAPIIG-RTATHCVERYQK 102

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>CEF1_EMENI (Q5AW35) Pre-mRNA-splicing factor cef1|
          Length = 791

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 230
           ++ +W+ EE EK L   KL    WR I   +G +TA Q     QK   +
Sbjct: 57  RKVEWSREEDEKLLHLAKLMPTQWRTIAPIVG-RTATQCLERYQKLLDE 104

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>CEF1_SCHPO (P39964) Pre-mRNA-splicing factor cef1 (Cell division control|
           protein 5)
          Length = 757

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQK 218
           ++ +W+ EE EK L   KL    WR I   +G +TA Q     QK
Sbjct: 57  KKTEWSREEDEKLLHLAKLLPTQWRTIAPIVG-RTATQCLERYQK 100

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>CEF1_ASPFU (Q4WHG0) Pre-mRNA-splicing factor cef1|
          Length = 792

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 230
           ++ +W+ EE EK L   KL    WR I   +G +TA Q     QK   +
Sbjct: 57  RKVEWSREEDEKLLHLAKLMPTQWRTIAPIVG-RTATQCLERYQKLLDE 104

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>YMA9_CAEEL (P34454) Hypothetical protein F54F2.9|
          Length = 299

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +3

Query: 81  KQREKWTDEEHEKFLEALKLYGRS----WRQIQEHIGTKTAVQI 200
           K  + W+  E + F  AL+ Y +     W +I E IG+KT  Q+
Sbjct: 237 KSEDDWSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQV 280

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>MYBB_HUMAN (P10244) Myb-related protein B (B-Myb)|
          Length = 700

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 96  WTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 242
           WT EE +K +E +K YG + W  I +H+  +   Q R       +  V++
Sbjct: 86  WTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKK 135



 Score = 30.0 bits (66), Expect = 4.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 96  WTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 209
           WT+EE     EA K+ G  W +I + +  +T   +++H
Sbjct: 138 WTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNH 175

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>MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)|
          Length = 686

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 96  WTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 242
           WT EE +K +E +K YG + W  I +H+  +   Q R       +  V++
Sbjct: 86  WTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKK 135



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 209
           ++  WT+EE     EA K+ G  W +I + +  +T   +++H
Sbjct: 134 KKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNH 175

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>MYBB_MOUSE (P48972) Myb-related protein B (B-Myb)|
          Length = 704

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 96  WTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 242
           WT EE +K +E +K YG + W  I +H+  +   Q R       +  V++
Sbjct: 86  WTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKK 135



 Score = 30.4 bits (67), Expect = 3.6
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +3

Query: 96  WTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPGAKIE 260
           WT+EE     EA K+ G  W +I + +  +T   +++H      + V   G   E
Sbjct: 138 WTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKVDTGGFPAE 192

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>MYB98_ARATH (Q9S7L2) Transcription factor MYB98 (Myb-related protein 98)|
           (AtMYB98)
          Length = 427

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 209
           ++E W++EE    +E  K  G  W +I + +  +T   I++H
Sbjct: 268 KKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTENSIKNH 309

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>SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 (Ponsin)|
           (c-Cbl-associated protein) (CAP) (SH3 domain protein 5)
           (SH3P12)
          Length = 1290

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 148 GPGVRYKNTLAQRPLSKSEAMPRSFSPRWCANPELKLRSRSLPL-GQRGSRCIHILASVR 324
           GPG ++K  L+      SE +P  F PR  A   L    +S+ L  ++   C ++  S+ 
Sbjct: 504 GPGCKHKKPLSAAKACISEILPSKFKPRLSAPSALLQEQKSVLLPSEKAQSCENLCVSLN 563

Query: 325 TPATG 339
               G
Sbjct: 564 DSKRG 568

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>CB013_HUMAN (Q8IW19) Protein C2orf13|
          Length = 511

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = +1

Query: 154 GVRYKNTLAQRPLSKSEAMPRSFSPRWCANPEL-----KLRSRSLPLGQRGSRCIHILAS 318
           G   KNT  +     S+ MP+SFS    +N E+       +   LP+ + G    H +A+
Sbjct: 252 GEECKNTDQEESTISSKEMPQSFSAITLSNTEMNNIKTNAQRNKLPIEELGKVSKHKIAT 311

Query: 319 VRTP 330
            RTP
Sbjct: 312 KRTP 315

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>CEF1_MAGGR (Q52G60) Pre-mRNA-splicing factor CEF1|
          Length = 773

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 93  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPGA 251
           +W+ +E EK L   KL    WR I   +G +TA Q     QK   +  ++  A
Sbjct: 60  EWSKDEDEKLLHLAKLMPTQWRTIAPIVG-RTANQCLERYQKLLDEAEQKEAA 111

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>MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-related protein|
           2) (XMYB2)
          Length = 728

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPG 248
           ++  WT+EE      A K  G  W +I + +  +T   I++H      + V + G
Sbjct: 137 KKSSWTEEEDRIIYSAHKRMGNRWAEIAKLLPGRTDNSIKNHWNSTMKRKVEQEG 191

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>APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2|
           (Pseudo-response regulator 2) (TOC2 protein)
          Length = 535

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
 Frame = +3

Query: 78  TKQREKWTDEEHEKFLEALKLYGRSW---RQIQE--HIGTKTAVQIRSHAQKF 221
           ++++  WT E H+KF++A++  G       +I E   +GT T   + SH QKF
Sbjct: 295 SRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKF 347

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>CASQ2_MOUSE (O09161) Calsequestrin-2 precursor (Calsequestrin, cardiac muscle|
           isoform)
          Length = 415

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -3

Query: 511 SSSDDSGEVLRDDGFDIDDPKASDCIADNTDTGEPFSWSEPEDDE 377
           ++ DD  E   DDG D DD    D   DN+D     S  + +DDE
Sbjct: 371 NTEDDDNEDEDDDGDDNDDDDDDDDDNDNSDEDNEDSDDDDDDDE 415

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>MYB_XENLA (Q08759) Myb protein|
          Length = 624

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 209
           ++  WT+EE     EA K  G  W +I + +  +T   I++H
Sbjct: 140 KKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNH 181

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>MYBB_XENLA (P52551) Myb-related protein B (B-Myb) (Myb-related protein 1)|
           (XMYB1)
          Length = 743

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPG 248
           ++  WT+EE     +A K+ G  W +I + +  +T   +++H      + V   G
Sbjct: 134 KKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKVETGG 188



 Score = 29.3 bits (64), Expect = 8.1
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +3

Query: 96  WTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 242
           WT EE EK +E +K YG + W  I + +  +   Q R       +  V++
Sbjct: 86  WTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMGKQCRERWHNHLNPEVKK 135

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>MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)|
          Length = 636

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPG 248
           ++  WT+EE     +A K  G  W +I + +  +T   I++H      + V + G
Sbjct: 143 KKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEG 197

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>MB3R1_ARATH (Q9S7G7) Myb-related protein 3R-1 (Plant c-MYB-like protein 1)|
           (Protein PC-MYB1) (PC-MYB1)
          Length = 776

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +3

Query: 87  REKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 209
           +  WT EE    + A ++YG  W ++ + +  ++   I++H
Sbjct: 139 KNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNH 179

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>MYBA_CHICK (P52550) Myb-related protein A (A-Myb)|
          Length = 757

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPG 248
           ++  WT+ E     EA K  G  W +I + +  +T   I++H      + V + G
Sbjct: 138 KKSSWTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEG 192

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>MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)|
          Length = 640

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPG 248
           ++  WT+EE     +A K  G  W +I + +  +T   I++H      + V + G
Sbjct: 143 KKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEG 197

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>MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)|
          Length = 640

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPG 248
           ++  WT+EE     +A K  G  W +I + +  +T   I++H      + V + G
Sbjct: 143 KKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEG 197

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>DZIP1_MOUSE (Q8BMD2) Zinc finger protein DZIP1 (DAZ-interacting protein 1|
           homolog)
          Length = 852

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = +3

Query: 27  EEGMGEHPVKPRKPYTITKQRE--------KWTDEEHEKFLEAL-KLYGRSWRQIQEHIG 179
           E     H V+  K Y + K +E        +W +EE EK LE + K+ G   R+ +E   
Sbjct: 242 ESAQHSHAVRFSKDYEMQKSKEEDFLKLFDRWKEEEKEKLLEEMEKVKGMFMREFKELTS 301

Query: 180 TKTAVQ 197
             +A++
Sbjct: 302 KNSALE 307

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>MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)|
          Length = 641

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPG 248
           ++  WT+EE     +A K  G  W +I + +  +T   I++H      + V + G
Sbjct: 143 KKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEG 197

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>RCOR_CAEEL (Q18919) REST corepressor spr-1 (CoREST) (Suppressor of presenilin|
           1)
          Length = 558

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 90  EKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQI 200
           + WT  E  + +    +YG  +  I + IGTKT  Q+
Sbjct: 484 QDWTQLERSQVIRCFNMYGAHFEHIADVIGTKTPDQV 520

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>MYB_AVIMB (P01104) Transforming protein Myb|
          Length = 382

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPG 248
           ++  WT+EE     +A K  G  W +I + +  +T   +++H      + V + G
Sbjct: 72  KKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRKVEQEG 126

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>CEF1_USTMA (Q4P652) Pre-mRNA-splicing factor CEF1|
          Length = 820

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 230
           ++ +W+ EE EK L   KL    WR I   +G +TA       QK   +
Sbjct: 59  KKTEWSKEEDEKLLHLAKLMPTQWRTIAPLVG-RTANHCLERYQKLLDQ 106

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>CEF1_CRYNE (Q5K9L1) Pre-mRNA-splicing factor CEF1|
          Length = 838

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 84  QREKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQK 218
           ++ +W+  E EK L   KL    WR I   +G +TA Q     QK
Sbjct: 58  KKVEWSKTEDEKLLHLAKLMPTQWRTIAPIVG-RTATQCLERYQK 101

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>CEF1_NEUCR (Q7SAF6) Pre-mRNA-splicing factor cef-1|
          Length = 779

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 93  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 230
           +W+ EE EK L   KL    WR I   +G +TA Q     Q+   +
Sbjct: 60  EWSKEEDEKLLHLAKLMPTQWRTIAPIVG-RTANQCLERYQRLLDE 104

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>SYR_OCEIH (Q8EM45) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 556

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 75  ITKQREKWTDEEHEKFLEALKLYG 146
           + K  EKW D++HE+ L+  K YG
Sbjct: 215 VKKDGEKWADKDHEERLDFFKEYG 238

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>ABP1_YEAST (P15891) Actin-binding protein|
          Length = 591

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -3

Query: 478 DDGFDIDDPKASD--CIADNTDTGEPFSWSEPEDDEI*ASLDGPFAGFAPLQESA 320
           DD +D D+ +A+     + N  +G P    EPE +EI  SL    +  AP QE A
Sbjct: 435 DDDWDDDEDEAAQPPLPSRNVASGAPVQKEEPEQEEIAPSLPSRNSIPAPKQEEA 489

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>MIER1_CHICK (Q5ZKT9) Mesoderm induction early response protein 1 (Mi-er1)|
          Length = 513

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +3

Query: 60  RKPYTITKQREK---WTDEEHEKFLEALKLYGRSWRQIQ 167
           R  + +   RE+   WT+EE   F + LK+YG+ +  IQ
Sbjct: 275 RLRFNVKAAREELSVWTEEECRNFEQGLKVYGKDFHVIQ 313


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,890,235
Number of Sequences: 219361
Number of extensions: 1822734
Number of successful extensions: 6189
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 5881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6183
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result