ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal35n13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK064862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I03, full insert sequence Length = 1725 Score = 153 bits (77), Expect = 7e-34 Identities = 182/217 (83%) Strand = Plus / Plus Query: 299 tagatttccctggaggaaagctttcctttgttggtgaaatgaatttcctgccagagtcgc 358 |||||||||||||||||||| | |||||||||| ||||||||| ||||| ||||| || | Sbjct: 370 tagatttccctggaggaaaggtctcctttgttgctgaaatgaacttccttccagaatctc 429 Query: 359 aaacggaaaggatcaactgttaccgtgttcttgacgacgatggtggcactatatacaaca 418 | | ||| ||||||||||||||||||||||||||||| || || | || |||| | Sbjct: 430 agagggataggatcaactgttaccgtgttcttgacgatgacggcagaacaatatctggaa 489 Query: 419 gtagattccaagaggtcagcaaggacttggctctgaaaatgtacagtaacatggtcaccc 478 | ||||||||||||||||| ||||| |||||||||||||||||| | | |||| ||||| Sbjct: 490 gcagattccaagaggtcagtaaggagctggctctgaaaatgtacaatgaaatggccaccc 549 Query: 479 tccagattatggacacaatattctacgaagctcagag 515 ||||| | ||||| ||||| |||| ||||||||||| Sbjct: 550 tccaggtcatggatacaatcttctttgaagctcagag 586 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 205 ttctgctccgtccggcgcttcgcaggagatagcgccgccgccgctgccgtcgaggaaccg 264 ||||||||||||||||| ||| | || || ||| ||||||||| ||||||||||| || Sbjct: 276 ttctgctccgtccggcgtttcaccggggagagcaacgccgccgccgccgtcgaggaggcg 335 Query: 265 gagaa 269 ||||| Sbjct: 336 gagaa 340
>dbj|AK060732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A05, full insert sequence Length = 1705 Score = 153 bits (77), Expect = 7e-34 Identities = 182/217 (83%) Strand = Plus / Plus Query: 299 tagatttccctggaggaaagctttcctttgttggtgaaatgaatttcctgccagagtcgc 358 |||||||||||||||||||| | |||||||||| ||||||||| ||||| ||||| || | Sbjct: 379 tagatttccctggaggaaaggtctcctttgttgctgaaatgaacttccttccagaatctc 438 Query: 359 aaacggaaaggatcaactgttaccgtgttcttgacgacgatggtggcactatatacaaca 418 | | ||| ||||||||||||||||||||||||||||| || || | || |||| | Sbjct: 439 agagggataggatcaactgttaccgtgttcttgacgatgacggcagaacaatatctggaa 498 Query: 419 gtagattccaagaggtcagcaaggacttggctctgaaaatgtacagtaacatggtcaccc 478 | ||||||||||||||||| ||||| |||||||||||||||||| | | |||| ||||| Sbjct: 499 gcagattccaagaggtcagtaaggagctggctctgaaaatgtacaatgaaatggccaccc 558 Query: 479 tccagattatggacacaatattctacgaagctcagag 515 ||||| | ||||| ||||| |||| ||||||||||| Sbjct: 559 tccaggtcatggatacaatcttctttgaagctcagag 595 Score = 42.1 bits (21), Expect = 1.8 Identities = 54/65 (83%) Strand = Plus / Plus Query: 205 ttctgctccgtccggcgcttcgcaggagatagcgccgccgccgctgccgtcgaggaaccg 264 ||||||||||||||||| ||| | || | ||| ||||||||| ||||||||||| || Sbjct: 285 ttctgctccgtccggcgtttcaccggggggagcaacgccgccgccgccgtcgaggaggcg 344 Query: 265 gagaa 269 ||||| Sbjct: 345 gagaa 349
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 299 tagatttccctggaggaaagctttcctttgttggtgaaatgaatttcctgccagagtcgc 358 |||||||||||||||||||| | |||||||||| ||||||||| ||||| ||||| || | Sbjct: 4210132 tagatttccctggaggaaaggtctcctttgttgctgaaatgaacttccttccagaatctc 4210191 Query: 359 aaacggaaaggatcaactgttaccgtgttcttgacga 395 | | ||| ||||||||||||||||||||||||||||| Sbjct: 4210192 agagggataggatcaactgttaccgtgttcttgacga 4210228 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 431 aggtcagcaaggacttggctctgaaaatgtacagtaacatggtcaccctccagattatgg 490 ||||||| ||||| |||||||||||||||||| | | |||| |||||||||| | |||| Sbjct: 4210376 aggtcagtaaggagctggctctgaaaatgtacaatgaaatggccaccctccaggtcatgg 4210435 Query: 491 acacaatattctacgaagctcagag 515 | ||||| |||| ||||||||||| Sbjct: 4210436 atacaatcttctttgaagctcagag 4210460 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 205 ttctgctccgtccggcgcttcgcaggagatagcgccgccgccgctgccgtcgaggaaccg 264 ||||||||||||||||| ||| | || || ||| ||||||||| ||||||||||| || Sbjct: 4208572 ttctgctccgtccggcgtttcaccggggagagcaacgccgccgccgccgtcgaggaggcg 4208631 Query: 265 gagaa 269 ||||| Sbjct: 4208632 gagaa 4208636 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 17827064 cgccgccgccgctgccgtcg 17827083 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 6353406 cgccgccgccgctgccgtcg 6353387
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 299 tagatttccctggaggaaagctttcctttgttggtgaaatgaatttcctgccagagtcgc 358 |||||||||||||||||||| | |||||||||| ||||||||| ||||| ||||| || | Sbjct: 4210119 tagatttccctggaggaaaggtctcctttgttgctgaaatgaacttccttccagaatctc 4210178 Query: 359 aaacggaaaggatcaactgttaccgtgttcttgacga 395 | | ||| ||||||||||||||||||||||||||||| Sbjct: 4210179 agagggataggatcaactgttaccgtgttcttgacga 4210215 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 431 aggtcagcaaggacttggctctgaaaatgtacagtaacatggtcaccctccagattatgg 490 ||||||| ||||| |||||||||||||||||| | | |||| |||||||||| | |||| Sbjct: 4210363 aggtcagtaaggagctggctctgaaaatgtacaatgaaatggccaccctccaggtcatgg 4210422 Query: 491 acacaatattctacgaagctcagag 515 | ||||| |||| ||||||||||| Sbjct: 4210423 atacaatcttctttgaagctcagag 4210447 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 205 ttctgctccgtccggcgcttcgcaggagatagcgccgccgccgctgccgtcgaggaaccg 264 ||||||||||||||||| ||| | || || ||| ||||||||| ||||||||||| || Sbjct: 4208559 ttctgctccgtccggcgtttcaccggggagagcaacgccgccgccgccgtcgaggaggcg 4208618 Query: 265 gagaa 269 ||||| Sbjct: 4208619 gagaa 4208623 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 17753383 cgccgccgccgctgccgtcg 17753402 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 6353281 cgccgccgccgctgccgtcg 6353262
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Minus Query: 299 tagatttccctggaggaaagctttcctttgttggtgaaatgaatttcctgccagagtcgc 358 |||||||||||||||||||| | |||||||||| ||||||||| ||||| ||||| || | Sbjct: 73651 tagatttccctggaggaaaggtctcctttgttgctgaaatgaacttccttccagaatctc 73592 Query: 359 aaacggaaaggatcaactgttaccgtgttcttgacga 395 | | ||| ||||||||||||||||||||||||||||| Sbjct: 73591 agagggataggatcaactgttaccgtgttcttgacga 73555 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 431 aggtcagcaaggacttggctctgaaaatgtacagtaacatggtcaccctccagattatgg 490 ||||||| ||||| |||||||||||||||||| | | |||| |||||||||| | |||| Sbjct: 73407 aggtcagtaaggagctggctctgaaaatgtacaatgaaatggccaccctccaggtcatgg 73348 Query: 491 acacaatattctacgaagctcagag 515 | ||||| |||| ||||||||||| Sbjct: 73347 atacaatcttctttgaagctcagag 73323 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Minus Query: 205 ttctgctccgtccggcgcttcgcaggagatagcgccgccgccgctgccgtcgaggaaccg 264 ||||||||||||||||| ||| | || || ||| ||||||||| ||||||||||| || Sbjct: 75211 ttctgctccgtccggcgtttcaccggggagagcaacgccgccgccgccgtcgaggaggcg 75152 Query: 265 gagaa 269 ||||| Sbjct: 75151 gagaa 75147
>gb|BT018525.1| Zea mays clone EL01N0432G12.d mRNA sequence Length = 1695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 334 gaaatgaatttcctgccagagtcgcaaacggaaaggatcaactgttaccgtgttcttgac 393 |||||||| ||||| ||||| ||| | ||||||||||||||| ||||| || |||||| Sbjct: 387 gaaatgaacttccttccagaatcgacgagggaaaggatcaactgctaccgcgtgcttgac 446 Query: 394 gacgatggtggcactatatacaacagtagattccaagaggtcagcaaggacttggctctg 453 ||||| || | || |||| |||||||||||||||||||| ||| |||||||| Sbjct: 447 gacgacggcagaacgatatcaggaagtagattccaagaggtcagtcgggagctggctctg 506 Query: 454 aaaatgtacagtaacatggtcaccctccagattatggacacaatattctacgaagctcag 513 || |||||||| | |||||||| |||||||| ||||| || ||||||||||| |||||| Sbjct: 507 aagatgtacagcgagatggtcacgctccagatcatggataccatattctacgaggctcag 566 Query: 514 ag 515 || Sbjct: 567 ag 568 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 205 ttctgctccgtccggcgcttcgcagg 230 |||||||||||||||||||||||||| Sbjct: 243 ttctgctccgtccggcgcttcgcagg 268
>gb|AY106153.1| Zea mays PCO079304 mRNA sequence Length = 1709 Score = 75.8 bits (38), Expect = 1e-10 Identities = 146/182 (80%) Strand = Plus / Plus Query: 334 gaaatgaatttcctgccagagtcgcaaacggaaaggatcaactgttaccgtgttcttgac 393 |||||||| ||||| ||||| ||| | ||||||||||||||| ||||| || |||||| Sbjct: 441 gaaatgaacttccttccagaatcgacgagggaaaggatcaactgctaccgcgtgcttgac 500 Query: 394 gacgatggtggcactatatacaacagtagattccaagaggtcagcaaggacttggctctg 453 ||||| || | || |||| |||||||||||||||||||| ||| |||||||| Sbjct: 501 gacgacggcagaacgatatcaggaagtagattccaagaggtcagtcgggagctggctctg 560 Query: 454 aaaatgtacagtaacatggtcaccctccagattatggacacaatattctacgaagctcag 513 || |||||||| | ||||| || |||||||| ||||| || || |||||||| |||||| Sbjct: 561 aagatgtacagcgagatggtgacgctccagatcatggataccatcttctacgaggctcag 620 Query: 514 ag 515 || Sbjct: 621 ag 622 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 205 ttctgctccgtccggcgcttcgcagg 230 |||||||||||||||||||||||||| Sbjct: 297 ttctgctccgtccggcgcttcgcagg 322
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 239 ccgccgccgctgccgtcgaggaa 261 ||||||||||||||||||||||| Sbjct: 4975773 ccgccgccgctgccgtcgaggaa 4975751
>ref|XM_514926.1| PREDICTED: Pan troglodytes similar to cystathionine beta-synthase minor isoform (LOC458588), mRNA Length = 4683 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 28 cgccgccgccgctgccgtcga 8
>ref|XM_479471.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1425 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgaggaa 261 |||||||||||| |||||||||||| Sbjct: 487 cgccgccgccgccgccgtcgaggaa 463
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence Length = 132292 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 21418 cgccgccgccgctgccgtcga 21398
>gb|AC109294.8| Mus musculus chromosome 1, clone RP24-236C22, complete sequence Length = 151772 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 315 aaagctttcctttgttggtgaaatg 339 |||| |||||||||||||||||||| Sbjct: 31109 aaagatttcctttgttggtgaaatg 31085
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gcgccgccgccgctgccgtcg 256 ||||||||||||||||||||| Sbjct: 32922043 gcgccgccgccgctgccgtcg 32922063 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 21516524 cgccgccgccgctgccgtcga 21516504
>ref|XM_754960.1| Ustilago maydis 521 hypothetical protein (UM03906.1) partial mRNA Length = 4014 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tcttgacgacgatggtggcac 407 ||||||||||||||||||||| Sbjct: 1656 tcttgacgacgatggtggcac 1676
>gb|BC032521.2| Homo sapiens U2 small nuclear RNA auxiliary factor 1, mRNA (cDNA clone IMAGE:5498733), containing frame-shift errors Length = 4710 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 76 cgccgccgccgctgccgtcga 56
>gb|BC005915.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1, transcript variant c, mRNA (cDNA clone MGC:14511 IMAGE:4295037), complete cds Length = 995 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 22 cgccgccgccgctgccgtcga 2
>ref|NM_001025203.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1 (U2AF1), transcript variant b, mRNA Length = 971 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 76 cgccgccgccgctgccgtcga 56
>ref|NM_006758.2| Homo sapiens U2 small nuclear RNA auxiliary factor 1 (U2AF1), transcript variant a, mRNA Length = 971 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 76 cgccgccgccgctgccgtcga 56
>ref|NM_001025204.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1 (U2AF1), transcript variant c, mRNA Length = 1038 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 76 cgccgccgccgctgccgtcga 56
>gb|DQ352940.1| Atta sp. CSM-2006 abdominal-A (AbdA) gene, partial cds Length = 648 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 390 cgccgccgccgctgccgtcga 410
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 gcgccgccgccgctgccgtcg 256 ||||||||||||||||||||| Sbjct: 68132 gcgccgccgccgctgccgtcg 68112
>emb|AL390218.1|NCB7N4 Neurospora crassa DNA linkage group II BAC clone B7N4 Length = 41750 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 21199 cgccgccgccgctgccgtcga 21179
>emb|AJ627978.1| Homo sapiens mRNA for U2 snRNP auxiliary factor small subunit (U2AF1 gene), splice variant b Length = 813 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 22 cgccgccgccgctgccgtcga 2
>emb|AL832665.1|HSM803975 Homo sapiens mRNA; cDNA DKFZp313J1712 (from clone DKFZp313J1712) Length = 3971 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 22 cgccgccgccgctgccgtcga 2
>emb|CR606196.1| full-length cDNA clone CS0DB008YM01 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 840 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 21 cgccgccgccgctgccgtcga 1
>gb|AC150798.3| Medicago truncatula chromosome 2 BAC clone mth2-33b11, complete sequence Length = 120992 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 acttggctctgaaaatgtaca 463 ||||||||||||||||||||| Sbjct: 78104 acttggctctgaaaatgtaca 78124
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcgaggaa 261 |||||||||||| |||||||||||| Sbjct: 28387391 cgccgccgccgccgccgtcgaggaa 28387415 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 27794164 cgccgccgccgctgccgtcg 27794145 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 21536287 tagcgccgccgccgctgccg 21536306 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ccgccgccgctgccgtcgag 258 |||||||||||||||||||| Sbjct: 5065101 ccgccgccgctgccgtcgag 5065082
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 gcgccgccgccgctgccgtcgagga 260 |||||||||||||||||| |||||| Sbjct: 9048151 gcgccgccgccgctgccggcgagga 9048127 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ccgccgccgctgccgtcgag 258 |||||||||||||||||||| Sbjct: 20378592 ccgccgccgctgccgtcgag 20378573
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gcgccgccgccgctgccgtcg 256 ||||||||||||||||||||| Sbjct: 33012553 gcgccgccgccgctgccgtcg 33012573 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 21509553 cgccgccgccgctgccgtcga 21509533
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gcgccgccgccgctgccgtcg 256 ||||||||||||||||||||| Sbjct: 3930267 gcgccgccgccgctgccgtcg 3930287 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgaggaaccggagaa 269 |||||||||||| |||| |||||| |||||||| Sbjct: 386613 cgccgccgccgccgccgccgaggacccggagaa 386581 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 28846128 cgccgccgccgctgccgtcg 28846109 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 28837017 cgccgccgccgctgccgtcg 28837036 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 gcgccgccgccgctgccgtcgagg 259 |||||||||||||||||| ||||| Sbjct: 26784496 gcgccgccgccgctgccgccgagg 26784473 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 22289343 cgccgccgccgctgccgtcg 22289324
>gb|AF550673.1| Atta sexdens abdominal-A protein (abd-A) gene, exon 1 and partial cds Length = 536 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 297 cgccgccgccgctgccgtcga 317
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 gcgccgccgccgctgccgtcgagga 260 ||||||||| ||||||||||||||| Sbjct: 5226456 gcgccgccggcgctgccgtcgagga 5226432
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgaggaaccggagaa 269 |||||||||||| |||| |||||| |||||||| Sbjct: 115397 cgccgccgccgccgccgccgaggacccggagaa 115365
>dbj|AP005387.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0084K06 Length = 177895 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 gcgccgccgccgctgccgtcgagga 260 |||||||||||||||||| |||||| Sbjct: 95469 gcgccgccgccgctgccggcgagga 95445
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcgaggaa 261 |||||||||||| |||||||||||| Sbjct: 112954 cgccgccgccgccgccgtcgaggaa 112978
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gcgccgccgccgctgccgtcg 256 ||||||||||||||||||||| Sbjct: 128738 gcgccgccgccgctgccgtcg 128758
>dbj|BS000233.1| Pan troglodytes chromosome 22 clone:CH251-445J22, map 22, complete sequences Length = 163962 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 72617 cgccgccgccgctgccgtcga 72637
>emb|AJ132828.1|SSI132828 Spermatozopsis similis mRNA for p210 protein, partial Length = 2028 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 gcgccgccgccgctgccgtcg 256 ||||||||||||||||||||| Sbjct: 13 gcgccgccgccgctgccgtcg 33
>dbj|AK107830.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-G11, full insert sequence Length = 949 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcgaggaaccggagaa 269 |||||||||||| |||| |||||| |||||||| Sbjct: 334 cgccgccgccgccgccgccgaggacccggagaa 366
>dbj|AP001748.1| Homo sapiens genomic DNA, chromosome 21q, section 92/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 263361 cgccgccgccgctgccgtcga 263381
>gb|M96982.1|HUMSNRNPAF Homo sapiens U2 snRNP auxiliary factor small subunit, complete cds Length = 904 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 30 cgccgccgccgctgccgtcga 10
>dbj|AP002085.1| Homo sapiens genomic DNA, chromosome 21, BAC clone:KB274G10, MX1-D21S171 region, complete sequence Length = 97015 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 88870 cgccgccgccgctgccgtcga 88890
>dbj|AP001631.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2007G4, MX1-D21S171 region, complete sequence Length = 148179 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcga 257 ||||||||||||||||||||| Sbjct: 67648 cgccgccgccgctgccgtcga 67668
>ref|NM_119567.3| Arabidopsis thaliana unknown protein AT4G34060 mRNA, complete cds Length = 3308 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ggaaagctttcctttgttgg 332 |||||||||||||||||||| Sbjct: 414 ggaaagctttcctttgttgg 395
>ref|XM_550410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 742 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 598 cgccgccgccgctgccgtcg 579
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 13891 cgccgccgccgctgccgtcg 13910
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 544107 tagcgccgccgccgctgccg 544126
>ref|XM_467324.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2024 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 1334 cgccgccgccgctgccgtcg 1353
>ref|XM_467320.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2095 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 171 cgccgccgccgctgccgtcg 152
>ref|XM_467161.1| Oryza sativa (japonica cultivar-group), mRNA Length = 741 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 gcgccgccgccgctgccgtcgagg 259 |||||||||||||||||| ||||| Sbjct: 241 gcgccgccgccgctgccgccgagg 264
>ref|NM_196934.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0006L06.16), mRNA Length = 2823 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 2560 cgccgccgccgctgccgtcg 2541
>ref|NM_193893.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1059 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 840 tagcgccgccgccgctgccg 821
>ref|NM_189327.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2355 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgagga 260 |||||||||||||||||| ||||| Sbjct: 1276 cgccgccgccgctgccgtggagga 1253
>ref|NM_186012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 12 cgccgccgccgctgccgtcg 31
>ref|XM_478632.1| Oryza sativa (japonica cultivar-group), mRNA Length = 823 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 48 tagcgccgccgccgctgccg 67
>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03, complete sequence Length = 146278 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 107684 cgccgccgccgctgccgtcg 107665
>gb|AY022795.1| Oryza sativa microsatellite MRG5120 containing (CGC)X8, closest to marker S1778, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 113 cgccgccgccgctgccgtcg 132
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 74865 cgccgccgccgctgccgtcg 74846
>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02, complete sequence Length = 75456 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 55473 cgccgccgccgctgccgtcg 55492
>gb|AY735663.1| Arabidopsis thaliana hypothetical protein AT4G34060 mRNA, complete cds Length = 3367 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ggaaagctttcctttgttgg 332 |||||||||||||||||||| Sbjct: 455 ggaaagctttcctttgttgg 436
>gb|AC091732.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0091O09, complete sequence Length = 123427 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 73989 tagcgccgccgccgctgccg 74008
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 151152 cgccgccgccgctgccgtcg 151133
>gb|AY591906.1| Gallus gallus SP8 mRNA, complete cds Length = 2864 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgagga 260 ||||||||||||||||| |||||| Sbjct: 222 cgccgccgccgctgccgccgagga 199
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 128034 cgccgccgccgctgccgtcg 128053
>ref|XM_952044.1| Neurospora crassa OR74A hypothetical protein (NCU06497.1) partial mRNA Length = 1467 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgagga 260 |||||||||||| ||||||||||| Sbjct: 648 cgccgccgccgccgccgtcgagga 625
>ref|XM_326351.1| Neurospora crassa OR74A hypothetical protein (NCU06497.1) partial mRNA Length = 1467 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgagga 260 |||||||||||| ||||||||||| Sbjct: 648 cgccgccgccgccgccgtcgagga 625
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 93705 cgccgccgccgctgccgtcg 93724
>gb|AC140201.3| Mus musculus BAC clone RP23-267F15 from chromosome 16, complete sequence Length = 166079 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 aatgtacagtaacatggtca 475 |||||||||||||||||||| Sbjct: 129183 aatgtacagtaacatggtca 129164
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gccgtggtccttgagctcgt 157 |||||||||||||||||||| Sbjct: 626851 gccgtggtccttgagctcgt 626870
>ref|XM_532252.2| PREDICTED: Canis familiaris similar to Translocation protein SEC63 homolog (LOC475016), mRNA Length = 2801 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 94 cgccgccgccgctgccgtcg 75
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 142 tggtccttgagctcgtcgacagtcccgg 169 |||| |||||| |||||||||||||||| Sbjct: 234044 tggttcttgaggtcgtcgacagtcccgg 234071
>gb|AC112681.12| Mus musculus chromosome 16, clone RP23-272P19, complete sequence Length = 228367 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 aatgtacagtaacatggtca 475 |||||||||||||||||||| Sbjct: 13154 aatgtacagtaacatggtca 13135
>gb|AC079817.41| Mus musculus strain C57BL/6J clone rp23-247i11 map 16, complete sequence Length = 197346 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 aatgtacagtaacatggtca 475 |||||||||||||||||||| Sbjct: 195469 aatgtacagtaacatggtca 195450
>gb|BC001923.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1, transcript variant a, mRNA (cDNA clone MGC:3916 IMAGE:2823296), complete cds Length = 920 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 20 cgccgccgccgctgccgtcg 1
>gb|BC001177.1| Homo sapiens U2 small nuclear RNA auxiliary factor 1, transcript variant a, mRNA (cDNA clone MGC:2223 IMAGE:3534272), complete cds Length = 920 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 20 cgccgccgccgctgccgtcg 1
>gb|DQ352947.1| Centromyrmex feae voucher RA0263 abdominal-A (AbdA) gene, partial cds Length = 645 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gccgccgccgctgccgtcga 257 |||||||||||||||||||| Sbjct: 388 gccgccgccgctgccgtcga 407
>ref|NG_004051.1| Mus musculus immunoglobulin lambda chain complex (Igl) on chromosome 16 Length = 234987 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 aatgtacagtaacatggtca 475 |||||||||||||||||||| Sbjct: 77198 aatgtacagtaacatggtca 77217
>emb|BX006273.1|CNS08D05 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA10CF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 163 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 64 cgccgccgccgctgccgtcg 45
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ggaaagctttcctttgttgg 332 |||||||||||||||||||| Sbjct: 148402 ggaaagctttcctttgttgg 148383
>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project) Length = 94091 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ggaaagctttcctttgttgg 332 |||||||||||||||||||| Sbjct: 18353 ggaaagctttcctttgttgg 18334
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 97068 cgccgccgccgctgccgtcg 97087
>gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; lozenge (lz) and c12.1 genes, complete cds; and c12.2 gene, partial cds Length = 45142 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 18172 cgccgccgccgctgccgtcg 18153
>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184334 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 77323 cgccgccgccgctgccgtcg 77342
>gb|AE005852.1| Caulobacter crescentus CB15 section 178 of 359 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 gaggtcagcaaggacttggc 449 |||||||||||||||||||| Sbjct: 5354 gaggtcagcaaggacttggc 5335
>gb|AE005747.1| Caulobacter crescentus CB15 section 73 of 359 of the complete genome Length = 11070 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 ccgtggtccttgagctcgtcgaca 162 |||||||||||||| ||||||||| Sbjct: 3335 ccgtggtccttgagatcgtcgaca 3358
>gb|AY118394.1| Drosophila melanogaster RE52162 full insert cDNA Length = 4400 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 330 cgccgccgccgctgccgtcg 311
>ref|NM_164996.1| Drosophila melanogaster CG31760-RA (CG31760), mRNA Length = 4335 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 330 cgccgccgccgctgccgtcg 311
>ref|NM_078544.2| Drosophila melanogaster lozenge CG1689-RA (lz), mRNA Length = 3469 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 1587 cgccgccgccgctgccgtcg 1568
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 gtcgctggcgagctgcgcggtcgt 129 |||||||||| ||||||||||||| Sbjct: 3055129 gtcgctggcgtgctgcgcggtcgt 3055152
>tpg|BK000364.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M84, complete sequence Length = 19009 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 7156 tagcgccgccgccgctgccg 7175
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 18392669 cgccgccgccgctgccgtcg 18392688 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 4293355 cgccgccgccgctgccgtcg 4293336
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 16752551 cgccgccgccgctgccgtcg 16752570 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 12017011 tagcgccgccgccgctgccg 12017030
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgagga 260 |||||||||||||||||| ||||| Sbjct: 18418755 cgccgccgccgctgccgtggagga 18418732 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 15197738 cgccgccgccgctgccgtcg 15197757 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 gccgccgccgctgccgtcgaggaa 261 ||||||||||| |||||||||||| Sbjct: 3859148 gccgccgccgccgccgtcgaggaa 3859171
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 25151050 cgccgccgccgctgccgtcg 25151069 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 14956815 cgccgccgccgctgccgtcg 14956796 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 6617419 cgccgccgccgctgccgtcg 6617438 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 5056567 cgccgccgccgctgccgtcg 5056548
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgagga 260 |||||||||||||||||| ||||| Sbjct: 42187151 cgccgccgccgctgccgtggagga 42187128 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 15684330 tagcgccgccgccgctgccg 15684349 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 14361505 cgccgccgccgctgccgtcg 14361486 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 4317183 cgccgccgccgctgccgtcg 4317202
>gb|AC011066.5|AC011066 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone BACR02B06, complete sequence Length = 174314 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 144492 cgccgccgccgctgccgtcg 144473
>gb|AC009198.8|AC009198 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone BACR19C12, complete sequence Length = 171134 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 2997 cgccgccgccgctgccgtcg 2978
>gb|AC153613.9| Mus musculus 10 BAC RP23-23C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214432 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 gtacctagatagtcacgtacatat 67 |||||||||||||||| ||||||| Sbjct: 173852 gtacctagatagtcacatacatat 173875
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgagga 260 |||||||||||||||||| ||||| Sbjct: 60349 cgccgccgccgctgccgtggagga 60326
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 239 ccgccgccgctgccgtcgaggaaccgga 266 ||||||||||||||| |||||| ||||| Sbjct: 4429739 ccgccgccgctgccggcgaggacccgga 4429766
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 86543 cgccgccgccgctgccgtcg 86524
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 47987 cgccgccgccgctgccgtcg 47968
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgagga 260 |||||||||||||||||| ||||| Sbjct: 133491 cgccgccgccgctgccgtggagga 133468
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcgagga 260 |||||||||||||||||| ||||| Sbjct: 80629 cgccgccgccgctgccgtggagga 80606
>dbj|AP005072.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0708H12 Length = 162381 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 gcgccgccgccgctgccgtcgagg 259 |||||||||||||||||| ||||| Sbjct: 146526 gcgccgccgccgctgccgccgagg 146503
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 162701 cgccgccgccgctgccgtcg 162682 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 153590 cgccgccgccgctgccgtcg 153609
>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1111_E07 Length = 123613 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 38820 cgccgccgccgctgccgtcg 38801 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 29709 cgccgccgccgctgccgtcg 29728
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 96953 cgccgccgccgctgccgtcg 96972
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 122227 tagcgccgccgccgctgccg 122246
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ccgccgccgctgccgtcgag 258 |||||||||||||||||||| Sbjct: 101987 ccgccgccgctgccgtcgag 101968
>dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1157F09 Length = 148802 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 112782 cgccgccgccgctgccgtcg 112763
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 22902 cgccgccgccgctgccgtcg 22883
>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1080A02 Length = 151360 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 gccgccgccgctgccgtcgaggaa 261 ||||||||||| |||||||||||| Sbjct: 98664 gccgccgccgccgccgtcgaggaa 98687
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 91714 cgccgccgccgctgccgtcg 91733
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0049I08 Length = 144379 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ccgccgccgctgccgtcgag 258 |||||||||||||||||||| Sbjct: 106790 ccgccgccgctgccgtcgag 106771
>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_E12 Length = 119691 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ccgccgccgctgccgtcgag 258 |||||||||||||||||||| Sbjct: 21268 ccgccgccgctgccgtcgag 21249
>dbj|AP003838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1582_D10 Length = 103475 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 74071 tagcgccgccgccgctgccg 74090
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 gcgccgccgccgctgccgtcgagg 259 |||||||||||||||||| ||||| Sbjct: 50549 gcgccgccgccgctgccgccgagg 50526
>dbj|AK120768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007O22, full insert sequence Length = 1541 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ccgccgccgctgccgtcgag 258 |||||||||||||||||||| Sbjct: 562 ccgccgccgctgccgtcgag 581
>dbj|AK107720.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-E08, full insert sequence Length = 591 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 226 cgccgccgccgctgccgtcg 207
>dbj|AK107068.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-E08, full insert sequence Length = 1881 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 590 cgccgccgccgctgccgtcg 571
>dbj|AK105354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-B07, full insert sequence Length = 582 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 269 cgccgccgccgctgccgtcg 250
>dbj|AK101900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071B22, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 1329 cgccgccgccgctgccgtcg 1310
>dbj|AK101598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051H11, full insert sequence Length = 2103 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 1336 cgccgccgccgctgccgtcg 1355
>dbj|AK099888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112I10, full insert sequence Length = 823 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 48 tagcgccgccgccgctgccg 67
>dbj|AK098929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020C01, full insert sequence Length = 3367 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 128 cgccgccgccgctgccgtcg 147
>dbj|AK069386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012H16, full insert sequence Length = 1192 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 140 cgccgccgccgctgccgtcg 159
>dbj|AK068415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H23, full insert sequence Length = 3413 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 174 cgccgccgccgctgccgtcg 193
>dbj|AK068055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132E09, full insert sequence Length = 2094 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 171 cgccgccgccgctgccgtcg 152
>dbj|AK062827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-F11, full insert sequence Length = 742 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 598 cgccgccgccgctgccgtcg 579
>dbj|AK058559.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D08, full insert sequence Length = 1706 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 1328 cgccgccgccgctgccgtcg 1309
>dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B06, full insert sequence Length = 1718 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 49 tagcgccgccgccgctgccg 68
>gb|AY107641.1| Zea mays PCO129147 mRNA sequence Length = 535 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 467 cgccgccgccgctgccgtcg 486
>gb|U47849.2|DMU47849 Drosophila melanogaster Lozenge (lz) mRNA, complete cds Length = 3471 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 1597 cgccgccgccgctgccgtcg 1578
>gb|AE003635.2| Drosophila melanogaster chromosome 2L, section 44 of 83 of the complete sequence Length = 308012 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 63968 cgccgccgccgctgccgtcg 63949
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 246398 cgccgccgccgctgccgtcg 246379
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 16761591 cgccgccgccgctgccgtcg 16761610 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 tagcgccgccgccgctgccg 253 |||||||||||||||||||| Sbjct: 12024351 tagcgccgccgccgctgccg 12024370
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 18552070 cgccgccgccgctgccgtcg 18552089 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 4302049 cgccgccgccgctgccgtcg 4302030
>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109555 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 14954 cgccgccgccgctgccgtcg 14935
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142246 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgccgctgccgtcg 256 |||||||||||||||||||| Sbjct: 46262 cgccgccgccgctgccgtcg 46281
>gb|AC149216.5| Mus musculus BAC clone RP24-194H8 from 18, complete sequence Length = 193186 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 cagcaaggacttggctctga 454 |||||||||||||||||||| Sbjct: 48515 cagcaaggacttggctctga 48496
>gb|AY867471.1| Aenictus eugenii abdominal-A (abd-A) gene, partial cds Length = 657 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gccgccgccgctgccgtcga 257 |||||||||||||||||||| Sbjct: 397 gccgccgccgctgccgtcga 416 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,099,163 Number of Sequences: 3902068 Number of extensions: 4099163 Number of successful extensions: 106925 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 163 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101982 Number of HSP's gapped (non-prelim): 4941 length of query: 515 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 492 effective length of database: 17,143,297,704 effective search space: 8434502470368 effective search space used: 8434502470368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
