>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3664

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
 Frame = -2

Query: 488  EEPDPGEGGVDVAEEREKLEVEGDLTLHLAELVGVPRPHEAPVEVPAALAGPDERQRAPE 309
            E+P   +G V V    +  +  G       +    P P  APV VP  L  P        
Sbjct: 3208 EQPRAADGVVKVPPASKAPQQPGKEAAKTPDAKAAPTPTPAPVPVPVPLPAPAPAPHGEA 3267

Query: 308  RLLQL-----LHGVPRLRLLHEVRGVELVH 234
            R+L +     L G+P    +    GV++VH
Sbjct: 3268 RILTVTPSNQLQGLPLTPPVVVTHGVQIVH 3297

>ODP2_PSEAE (Q59638) Dihydrolipoyllysine-residue acetyltransferase component of|
           pyruvate dehydrogenase complex (EC 2.3.1.12) (E2)
           (Dihydrolipoamide acetyltransferase component of
           pyruvate dehydrogenase complex)
          Length = 547

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 31/103 (30%), Positives = 38/103 (36%), Gaps = 19/103 (18%)
 Frame = -2

Query: 491 VEEPDPGEGGVDVAEEREKLEV-EGDLTLHLAELVGVPRPHEAPVEVPAALAGPDERQR- 318
           +E P P  G V+    +   EV  GDL L L      P   E P   PA  A P   Q+ 
Sbjct: 162 MEIPSPASGVVESVSIKVGDEVGTGDLILKLKVEGAAPAAEEQPAAAPAQAAAPAAEQKP 221

Query: 317 -----------------APERLLQLLHGVPRLRLLHEVRGVEL 240
                            AP R    +H  P +R+L    GVEL
Sbjct: 222 AAAAPAPAKADTPAPVGAPSRDGAKVHAGPAVRMLAREFGVEL 264

>YHS4_CAEEL (O18303) Hypothetical protein ZK849.4 in chromosome I|
          Length = 602

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 28/88 (31%), Positives = 36/88 (40%)
 Frame = -2

Query: 395 LVGVPRPHEAPVEVPAALAGPDERQRAPERLLQLLHGVPRLRLLHEVRGVELVHQVPDHP 216
           +V   RP  +P  +P AL  P+E    P     L    PR  L+HEV G +        P
Sbjct: 477 IVDGARPPPSPPALPPALPNPNEPPPPPPPAEALRADQPRHSLIHEV-GAQA------DP 529

Query: 215 GAARELQAGGSVPPDRLRRVGDHLDEPV 132
             A   QA   V P+   R  +H   PV
Sbjct: 530 AEANGAQALSPVLPNPNERADEHGHSPV 557

>MTRA_METTH (O27227) Tetrahydromethanopterin S-methyltransferase subunit A (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit A)
          Length = 237

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
 Frame = -2

Query: 491 VEEPDPGEGGVDVAEEREKLEVEGDLTLHLAELVGVPRPHEAPVEVPAALAGPDERQR-A 315
           VE+  P EG   V  +     + GD    +A         + PVE  AA+AGP + +   
Sbjct: 1   VEKKSPAEGWPVVNGDY----IVGDPESPVAATTLASHIEDVPVEAGAAIAGPCKTENLG 56

Query: 314 PERLLQLLHGVPRLRLL----HEVRG------VELVHQVPDHPGAARELQAGGSVP 177
            E+++  L   P +R L     EV+G      +E +HQ    P     + A G++P
Sbjct: 57  IEKMIANLISNPNIRFLILCGSEVQGHITGQSIEALHQNGVDPDKRNIIGATGAIP 112

>ZBT7B_HUMAN (O15156) Zinc finger and BTB domain-containing protein 7B (Zinc|
           finger protein 67 homolog) (Zfp-67) (Zinc finger protein
           Th-POK) (T-helper-inducing POZ/Kruppel-like factor)
           (Kruppel-related zinc finger protein cKrox) (hcKrox)
           (Zinc finger and
          Length = 539

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 35/130 (26%), Positives = 43/130 (33%), Gaps = 6/130 (4%)
 Frame = -2

Query: 491 VEEPDPGEGGVDVAEEREKLEVEGDLTLHLAELVGVPRPHEAPVEVPAALAGPD------ 330
           +E P P E   D    R+ LE     T       GVP   ++P +VP     P       
Sbjct: 146 LEAPSPDED--DCERARQYLEAFATATAS-----GVPNGEDSPPQVPLPPPPPPPPRPVA 198

Query: 329 ERQRAPERLLQLLHGVPRLRLLHEVRGVELVHQVPDHPGAARELQAGGSVPPDRLRRVGD 150
            R R P +      G     L+ EV        VP HP    E +  G V        GD
Sbjct: 199 RRSRKPRKAFLQTKGARANHLVPEVP------TVPAHPLTYEEEEVAGRVGSSGGSGPGD 252

Query: 149 HLDEPVGVHS 120
               P G  S
Sbjct: 253 SYSPPTGTAS 262

>MTRA_METTM (P80184) Tetrahydromethanopterin S-methyltransferase subunit A (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit A)
          Length = 237

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
 Frame = -2

Query: 491 VEEPDPGEGGVDVAEEREKLEVEGDLTLHLAELVGVPRPHEAPVEVPAALAGPDERQR-A 315
           VE+  P EG   V  +     + GD    +A         + PVE  AA+AGP + +   
Sbjct: 1   VEKKSPAEGWPVVNGDY----IVGDPESPVAATTLASHIEDIPVEAGAAIAGPCKTENLG 56

Query: 314 PERLLQLLHGVPRLRLL----HEVRG------VELVHQVPDHPGAARELQAGGSVP 177
            E+++  L   P +R L     EV+G      +E +HQ    P     + A G++P
Sbjct: 57  IEKMIANLISNPNIRFLILCGSEVQGHITGQSIEALHQNGVDPDKRNIIGATGAIP 112

>Y1897_METTH (O27919) UPF0244 protein MTH1897|
          Length = 182

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 25/74 (33%), Positives = 34/74 (45%)
 Frame = -2

Query: 341 AGPDERQRAPERLLQLLHGVPRLRLLHEVRGVELVHQVPDHPGAARELQAGGSVPPDRLR 162
           +G   + RA E +L L++G        EVRGVE+   VPD P    E   G     +R R
Sbjct: 14  SGNPVKVRATENVLGLIYGNV------EVRGVEVESGVPDQPVGLEETVRGA---VNRAR 64

Query: 161 RVGDHLDEPVGVHS 120
           R     +  VG+ S
Sbjct: 65  RAFRDCELSVGIES 78

>FDHE_PSEAE (Q9HV00) Protein fdhE homolog|
          Length = 309

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
 Frame = -2

Query: 383 PRPHEAPVEVPAALAGP--DERQRAPERLLQLLHGVPRLRLLHEVRGV-ELVHQVPDHPG 213
           P   EA   +P  L  P  D   R  ERLLQL  G P    L  V G+  L   + D+P 
Sbjct: 8   PGQIEAAANIPPHLHQPSRDLFARRGERLLQLAEGHPMGDYLRLVAGLCRLQQALLDNPP 67

Query: 212 AARELQAGGSVPPDRLRRVGDH 147
           A   L       P+RLR+  +H
Sbjct: 68  ALAPLD------PERLRKSREH 83

>PACC_TRIRU (Q9C1A4) pH-response transcription factor pacC/RIM101|
          Length = 758

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -2

Query: 488 EEPDPGEGGVDVAEEREKLEVEGDLTLHLAELVGVPRPHEAPVEVPA-----ALAGPDER 324
           +EP      +D A  R  ++++ D             PH +P   P      A AGPD+R
Sbjct: 558 DEPKLSSSVIDPALSRASVDMDEDAA-----------PHRSPSSTPTPTATTAAAGPDDR 606

Query: 323 QRAPERLLQLLHGVPRLRLLHEVR 252
           Q A E+       V  +RLL  +R
Sbjct: 607 QPAGEQ-----QWVENVRLLQRLR 625

>EFS_MOUSE (Q64355) Embryonal Fyn-associated substrate (SRC-interacting|
           protein) (Signal-integrating protein)
          Length = 560

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 383 PRPHEAPVEVPAALAGPDERQRAPE 309
           PR  EAP +VP AL  P E +R PE
Sbjct: 181 PREDEAPYDVPLALKPPAELERDPE 205

>GLMM_GLUOX (Q5FQB4) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 452

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -2

Query: 377 PHEAPVEVPAALAGPDERQRAPERLLQLLHGV-PRLRLLHEVRGVELVHQVPDH 219
           P  +P ++ AA A  DER     RL+    G  P +R++ E +   LVH+V DH
Sbjct: 389 PMSSP-DLAAAKAWADERLAGSGRLVLRASGTEPLIRVMAEAQDEALVHEVVDH 441

>MURC_WOLPM (P61683) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)|
           (UDP-N-acetylmuramoyl-L-alanine synthetase)
          Length = 498

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
 Frame = -2

Query: 404 LAELVGVPRPHEAPVEVPAALAGPDERQRAPERLLQLLHGVPRLRLLHEVRGVELVHQVP 225
           L+  +G+ +   A   +  A+          + LL+      R  L+ +++GV+L+    
Sbjct: 308 LSNAIGIHKVSNALAAISVAIKLGISDADIKKGLLEFQGVARRFSLIADIKGVKLIEDYA 367

Query: 224 DHPG-------AARELQAG---GSVPPDRLRRVGDHLDE 138
            HP        AAR +  G   G + P R  R+ +  DE
Sbjct: 368 HHPNEIYATLTAARSITKGKVIGIIEPLRFARIRNFFDE 406

>VID21_CANAL (Q5A119) Chromatin modification-related protein VID21|
          Length = 686

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 19/97 (19%)
 Frame = -2

Query: 491 VEEPDPGEGGVDVAEEREKLEVEGDLTLH------------LAELVGVPRPHEAPVEVPA 348
           V EP P    +    E  +L+ E D TLH            + + V  P P  AP   P 
Sbjct: 505 VTEPKPNSDRIPTPAELSRLKFERDKTLHENHINQQATRARMVQAVAKPAPAPAPAPPPP 564

Query: 347 ALAGPDERQRAP-------ERLLQLLHGVPRLRLLHE 258
               P +R   P       E++  LL      R+L +
Sbjct: 565 QPPKPMKRPTTPNGTPLTNEQIQHLLQMQKHRRMLQQ 601

>SDC3_RAT (P33671) Syndecan-3 precursor (SYND3) (N-syndecan) (Neuroglycan)|
          Length = 442

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +2

Query: 2   RPPPPLGTLAGSAPPRLILNQTKIRNGSS 88
           +P PPLGTL   A P L L+   I +GSS
Sbjct: 342 KPSPPLGTLPKGARPGLGLHDNAIDSGSS 370

>SDC3_MOUSE (Q64519) Syndecan-3 precursor (SYND3)|
          Length = 442

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +2

Query: 2   RPPPPLGTLAGSAPPRLILNQTKIRNGSS 88
           +P PPLGTL   A P L L+   I +GSS
Sbjct: 342 KPSPPLGTLPKGARPGLGLHDNAIDSGSS 370


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,418,428
Number of Sequences: 219361
Number of extensions: 1764290
Number of successful extensions: 7056
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7045
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)