| Clone Name | baal35n03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0076M06, complete sequence Length = 133581 Score = 264 bits (133), Expect = 3e-67 Identities = 298/353 (84%) Strand = Plus / Plus Query: 108 gcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcgccgacgcggcgcag 167 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||||||| Sbjct: 93269 gcgcagttcgccggagtggacgcctacggcctgatcaagatgatcgccgaggcggcgcag 93328 Query: 168 acggtccggaggaacagagccacctgcctgcagctcgcgcgccgcgccaggatgatcggg 227 ||||| ||| | ||||| || || ||||||||||||||||| ||| || ||||||||| Sbjct: 93329 acggtgcggcgcaacagggcgacgtgcctgcagctcgcgcggcgcctcaagatgatcgga 93388 Query: 228 gacctgatgcaccagctccacgccgcgcacctcatgcagcaaccggagacgaggaacccc 287 || || | | |||||||||| ||||| || |||||||| ||||||||||||||||| Sbjct: 93389 gatcttctcaagcagctccacggtgcgcagctgatgcagcagccggagacgaggaacccg 93448 Query: 288 atggagcagctggaggagacgctccggcgcgcgctgtcgctcgtcaggtcctgccagcgc 347 |||||||||||||||||||||||||||| ||| ||||||| |||| |||||| || Sbjct: 93449 gtggagcagctggaggagacgctccggcgagcgtacctgctcgtccggtcatgccagggc 93508 Query: 348 cgcgggtacctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtg 407 || | ||| | ||||| ||||||||||| | |||||||||||||||||| | || ||| Sbjct: 93509 cggagctacgtgtaccgctgcttcatgggaggccggcacgccgacgagctcagggaagtg 93568 Query: 408 cagggtgagatcaccttctacctccagcttttccctctcctcagctacgtcga 460 ||| |||||||| |||||||||||||||| ||||||||| ||||||| ||||| Sbjct: 93569 cagagtgagatcgccttctacctccagctcttccctctcgtcagctatgtcga 93621 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 394 agctccgcgaggtgcagggtgagatcaccttctacctccagcttttccctctcctcagct 453 |||| |||||||||||| |||| |||||||||||||||||||| |||||||| |||||| Sbjct: 16163 agctgcgcgaggtgcagagtgatatcaccttctacctccagctcttccctcttgtcagct 16222 Query: 454 acgtcgacaccaccctcacctggg 477 ||| ||||| |||| ||||||| Sbjct: 16223 tcgttgacacgacccgtacctggg 16246 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 276 acgaggaaccccatggagcagctggaggagacgctccg 313 ||||||||||| ||||||||||||||||||||||||| Sbjct: 16045 acgaggaacccggtggagcagctggaggagacgctccg 16082 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 539 acaggcacctgtggtaagaccatattttgtgcc 571 |||||||||| |||||||||||||||||||||| Sbjct: 93946 acaggcacctttggtaagaccatattttgtgcc 93978 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 396 ctccgcgaggtgcagggtgagatcaccttctacctccagcttttccc 442 ||||||||||||||| | |||||| | ||||||||||||| ||||| Sbjct: 87569 ctccgcgaggtgcagagcaagatcagcatctacctccagctcttccc 87615 Score = 40.1 bits (20), Expect = 9.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 106 ttgcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcg 153 |||||||| |||| || || || || || ||||||||||||||||||| Sbjct: 15875 ttgcgcagcttgccggggtagatgcatatgggctcatcaagatgatcg 15922
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 264 bits (133), Expect = 3e-67 Identities = 298/353 (84%) Strand = Plus / Plus Query: 108 gcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcgccgacgcggcgcag 167 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||||||| Sbjct: 26291620 gcgcagttcgccggagtggacgcctacggcctgatcaagatgatcgccgaggcggcgcag 26291679 Query: 168 acggtccggaggaacagagccacctgcctgcagctcgcgcgccgcgccaggatgatcggg 227 ||||| ||| | ||||| || || ||||||||||||||||| ||| || ||||||||| Sbjct: 26291680 acggtgcggcgcaacagggcgacgtgcctgcagctcgcgcggcgcctcaagatgatcgga 26291739 Query: 228 gacctgatgcaccagctccacgccgcgcacctcatgcagcaaccggagacgaggaacccc 287 || || | | |||||||||| ||||| || |||||||| ||||||||||||||||| Sbjct: 26291740 gatcttctcaagcagctccacggtgcgcagctgatgcagcagccggagacgaggaacccg 26291799 Query: 288 atggagcagctggaggagacgctccggcgcgcgctgtcgctcgtcaggtcctgccagcgc 347 |||||||||||||||||||||||||||| ||| ||||||| |||| |||||| || Sbjct: 26291800 gtggagcagctggaggagacgctccggcgagcgtacctgctcgtccggtcatgccagggc 26291859 Query: 348 cgcgggtacctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtg 407 || | ||| | ||||| ||||||||||| | |||||||||||||||||| | || ||| Sbjct: 26291860 cggagctacgtgtaccgctgcttcatgggaggccggcacgccgacgagctcagggaagtg 26291919 Query: 408 cagggtgagatcaccttctacctccagcttttccctctcctcagctacgtcga 460 ||| |||||||| |||||||||||||||| ||||||||| ||||||| ||||| Sbjct: 26291920 cagagtgagatcgccttctacctccagctcttccctctcgtcagctatgtcga 26291972 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 394 agctccgcgaggtgcagggtgagatcaccttctacctccagcttttccctctcctcagct 453 |||| |||||||||||| |||| |||||||||||||||||||| |||||||| |||||| Sbjct: 26213288 agctgcgcgaggtgcagagtgatatcaccttctacctccagctcttccctcttgtcagct 26213347 Query: 454 acgtcgacaccaccctcacctggg 477 ||| ||||| |||| ||||||| Sbjct: 26213348 tcgttgacacgacccgtacctggg 26213371 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 276 acgaggaaccccatggagcagctggaggagacgctccg 313 ||||||||||| ||||||||||||||||||||||||| Sbjct: 26213170 acgaggaacccggtggagcagctggaggagacgctccg 26213207 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 539 acaggcacctgtggtaagaccatattttgtgcc 571 |||||||||| |||||||||||||||||||||| Sbjct: 26292297 acaggcacctttggtaagaccatattttgtgcc 26292329 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 396 ctccgcgaggtgcagggtgagatcaccttctacctccagcttttccc 442 ||||||||||||||| | |||||| | ||||||||||||| ||||| Sbjct: 26285920 ctccgcgaggtgcagagcaagatcagcatctacctccagctcttccc 26285966 Score = 40.1 bits (20), Expect = 9.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 106 ttgcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcg 153 |||||||| |||| || || || || || ||||||||||||||||||| Sbjct: 26213000 ttgcgcagcttgccggggtagatgcatatgggctcatcaagatgatcg 26213047
>dbj|AK066296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059O19, full insert sequence Length = 1830 Score = 264 bits (133), Expect = 3e-67 Identities = 298/353 (84%) Strand = Plus / Plus Query: 108 gcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcgccgacgcggcgcag 167 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||||||| Sbjct: 84 gcgcagttcgccggagtggacgcctacggcctgatcaagatgatcgccgaggcggcgcag 143 Query: 168 acggtccggaggaacagagccacctgcctgcagctcgcgcgccgcgccaggatgatcggg 227 ||||| ||| | ||||| || || ||||||||||||||||| ||| || ||||||||| Sbjct: 144 acggtgcggcgcaacagggcgacgtgcctgcagctcgcgcggcgcctcaagatgatcgga 203 Query: 228 gacctgatgcaccagctccacgccgcgcacctcatgcagcaaccggagacgaggaacccc 287 || || | | |||||||||| ||||| || |||||||| ||||||||||||||||| Sbjct: 204 gatcttctcaagcagctccacggtgcgcagctgatgcagcagccggagacgaggaacccg 263 Query: 288 atggagcagctggaggagacgctccggcgcgcgctgtcgctcgtcaggtcctgccagcgc 347 |||||||||||||||||||||||||||| ||| ||||||| |||| |||||| || Sbjct: 264 gtggagcagctggaggagacgctccggcgagcgtacctgctcgtccggtcatgccagggc 323 Query: 348 cgcgggtacctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtg 407 || | ||| | ||||| ||||||||||| | |||||||||||||||||| | || ||| Sbjct: 324 cggagctacgtgtaccgctgcttcatgggaggccggcacgccgacgagctcagggaagtg 383 Query: 408 cagggtgagatcaccttctacctccagcttttccctctcctcagctacgtcga 460 ||| |||||||| |||||||||||||||| ||||||||| ||||||| ||||| Sbjct: 384 cagagtgagatcgccttctacctccagctcttccctctcgtcagctatgtcga 436 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 541 aggcacctgtggtaagaccatattttgtgcc 571 |||||||| |||||||||||||||||||||| Sbjct: 490 aggcacctttggtaagaccatattttgtgcc 520
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 264 bits (133), Expect = 3e-67 Identities = 298/353 (84%) Strand = Plus / Plus Query: 108 gcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcgccgacgcggcgcag 167 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||||||| Sbjct: 26605878 gcgcagttcgccggagtggacgcctacggcctgatcaagatgatcgccgaggcggcgcag 26605937 Query: 168 acggtccggaggaacagagccacctgcctgcagctcgcgcgccgcgccaggatgatcggg 227 ||||| ||| | ||||| || || ||||||||||||||||| ||| || ||||||||| Sbjct: 26605938 acggtgcggcgcaacagggcgacgtgcctgcagctcgcgcggcgcctcaagatgatcgga 26605997 Query: 228 gacctgatgcaccagctccacgccgcgcacctcatgcagcaaccggagacgaggaacccc 287 || || | | |||||||||| ||||| || |||||||| ||||||||||||||||| Sbjct: 26605998 gatcttctcaagcagctccacggtgcgcagctgatgcagcagccggagacgaggaacccg 26606057 Query: 288 atggagcagctggaggagacgctccggcgcgcgctgtcgctcgtcaggtcctgccagcgc 347 |||||||||||||||||||||||||||| ||| ||||||| |||| |||||| || Sbjct: 26606058 gtggagcagctggaggagacgctccggcgagcgtacctgctcgtccggtcatgccagggc 26606117 Query: 348 cgcgggtacctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtg 407 || | ||| | ||||| ||||||||||| | |||||||||||||||||| | || ||| Sbjct: 26606118 cggagctacgtgtaccgctgcttcatgggaggccggcacgccgacgagctcagggaagtg 26606177 Query: 408 cagggtgagatcaccttctacctccagcttttccctctcctcagctacgtcga 460 ||| |||||||| |||||||||||||||| ||||||||| ||||||| ||||| Sbjct: 26606178 cagagtgagatcgccttctacctccagctcttccctctcgtcagctatgtcga 26606230 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 394 agctccgcgaggtgcagggtgagatcaccttctacctccagcttttccctctcctcagct 453 |||| |||||||||||| |||| |||||||||||||||||||| |||||||| |||||| Sbjct: 26528772 agctgcgcgaggtgcagagtgatatcaccttctacctccagctcttccctcttgtcagct 26528831 Query: 454 acgtcgacaccaccctcacctggg 477 ||| ||||| |||| ||||||| Sbjct: 26528832 tcgttgacacgacccgtacctggg 26528855 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 276 acgaggaaccccatggagcagctggaggagacgctccg 313 ||||||||||| ||||||||||||||||||||||||| Sbjct: 26528654 acgaggaacccggtggagcagctggaggagacgctccg 26528691 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 539 acaggcacctgtggtaagaccatattttgtgcc 571 |||||||||| |||||||||||||||||||||| Sbjct: 26606555 acaggcacctttggtaagaccatattttgtgcc 26606587 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 396 ctccgcgaggtgcagggtgagatcaccttctacctccagcttttccc 442 ||||||||||||||| | |||||| | ||||||||||||| ||||| Sbjct: 26600178 ctccgcgaggtgcagagcaagatcagcatctacctccagctcttccc 26600224 Score = 40.1 bits (20), Expect = 9.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 106 ttgcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcg 153 |||||||| |||| || || || || || ||||||||||||||||||| Sbjct: 26528484 ttgcgcagcttgccggggtagatgcatatgggctcatcaagatgatcg 26528531
>gb|AY104794.1| Zea mays PCO093477 mRNA sequence Length = 1130 Score = 117 bits (59), Expect = 5e-23 Identities = 142/167 (85%), Gaps = 2/167 (1%) Strand = Plus / Plus Query: 296 gctggaggagacgctccggcgcgcgctgtc-gctcgtcaggtcctgccagcgccgcgggt 354 |||||||||||||||||||||||| || | ||| || ||||||||||||| ||||||| Sbjct: 292 gctggaggagacgctccggcgcgc-ctacctgctggtgcggtcctgccagcggcgcgggt 350 Query: 355 acctctaccggtgcttcatgggggcgcggcacgccgacgagctccgcgaggtgcagggtg 414 || | ||| ||| | ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 351 acgcgttccgctgcctgatgggggcgcggcacgcggacgagctccgcgagatgcagggcg 410 Query: 415 agatcaccttctacctccagcttttccctctcctcagctacgtcgac 461 ||||| |||||||||| | || ||||| ||| |||||||||||||| Sbjct: 411 agatcggcttctacctcgacctcttccccctcatcagctacgtcgac 457 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Plus Query: 138 ctcatcaagatgatcgccgacgcggcgcagacgg 171 ||||||| ||||||||| || ||||||||||||| Sbjct: 116 ctcatcacgatgatcgcggaggcggcgcagacgg 149
>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0002C14, complete sequence Length = 154029 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 394 agctccgcgaggtgcagggtgagatcaccttctacctccagcttttccctctcctcagct 453 |||| |||||||||||| |||| |||||||||||||||||||| |||||||| |||||| Sbjct: 118403 agctgcgcgaggtgcagagtgatatcaccttctacctccagctcttccctcttgtcagct 118462 Query: 454 acgtcgacaccaccctcacctggg 477 ||| ||||| |||| ||||||| Sbjct: 118463 tcgttgacacgacccgtacctggg 118486 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 276 acgaggaaccccatggagcagctggaggagacgctccg 313 ||||||||||| ||||||||||||||||||||||||| Sbjct: 118285 acgaggaacccggtggagcagctggaggagacgctccg 118322 Score = 40.1 bits (20), Expect = 9.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 106 ttgcgcagtttgcaggagtggacgcctacgggctcatcaagatgatcg 153 |||||||| |||| || || || || || ||||||||||||||||||| Sbjct: 118115 ttgcgcagcttgccggggtagatgcatatgggctcatcaagatgatcg 118162
>ref|XM_504217.1| Yarrowia lipolytica CLIB122, YALI0E21109g predicted mRNA Length = 1176 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Plus Query: 495 cctgctcctgctcctcaacctact 518 |||||||||||||||||||||||| Sbjct: 139 cctgctcctgctcctcaacctact 162
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 495 cctgctcctgctcctcaacctact 518 |||||||||||||||||||||||| Sbjct: 2511605 cctgctcctgctcctcaacctact 2511582
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 catcaagatgatcgccgacgcgg 162 ||||||||||||||||||||||| Sbjct: 3277219 catcaagatgatcgccgacgcgg 3277241
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 catcaagatgatcgccgacgcgg 162 ||||||||||||||||||||||| Sbjct: 735585 catcaagatgatcgccgacgcgg 735607
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 catcaagatgatcgccgacgcgg 162 ||||||||||||||||||||||| Sbjct: 544207 catcaagatgatcgccgacgcgg 544229 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 ggcgcggcacgccgacgagc 396 |||||||||||||||||||| Sbjct: 51741 ggcgcggcacgccgacgagc 51760
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 catcaagatgatcgccgacgcgg 162 ||||||||||||||||||||||| Sbjct: 498396 catcaagatgatcgccgacgcgg 498418
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 137 gctcatcaagatgatcgccgacgcgg 162 |||||| ||||||||||||||||||| Sbjct: 2323658 gctcatgaagatgatcgccgacgcgg 2323683
>ref|XM_684855.1| PREDICTED: Danio rerio similar to HBxAg transactivated protein 2 (LOC561451), partial mRNA Length = 3315 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 286 ccatggagcagctggaggagacgctc 311 |||||||||||| ||||||||||||| Sbjct: 2258 ccatggagcagccggaggagacgctc 2283
>gb|AY111044.1| Zea mays CL38592_1 mRNA sequence Length = 606 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 cgtcctcctcctcctcttggga 23 |||||||||||||||||||||| Sbjct: 487 cgtcctcctcctcctcttggga 508
>emb|AL583887.9| Mouse DNA sequence from clone RP23-121M7 on chromosome 15, complete sequence Length = 220050 Score = 44.1 bits (22), Expect = 0.59 Identities = 28/30 (93%) Strand = Plus / Plus Query: 421 ccttctacctccagcttttccctctcctca 450 |||||| ||||||||||||||| ||||||| Sbjct: 168421 ccttctgcctccagcttttcccactcctca 168450
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 catcaagatgatcgccgacgc 160 ||||||||||||||||||||| Sbjct: 3297775 catcaagatgatcgccgacgc 3297755
>ref|XM_324363.1| Neurospora crassa OR74A hypothetical protein (NCU05007.1) partial mRNA Length = 2001 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 ctccagcttttccctctcctc 449 ||||||||||||||||||||| Sbjct: 1326 ctccagcttttccctctcctc 1306
>ref|XM_950841.1| Neurospora crassa OR74A hypothetical protein (NCU05007.1) partial mRNA Length = 2001 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 ctccagcttttccctctcctc 449 ||||||||||||||||||||| Sbjct: 1326 ctccagcttttccctctcctc 1306
>gb|AC134570.5| Mus musculus BAC clone RP24-252B18 from chromosome 18, complete sequence Length = 183551 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 tgcaaagaggcacaggcacaggcac 546 |||||| |||||||||||||||||| Sbjct: 23462 tgcaaacaggcacaggcacaggcac 23438
>gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome 18, complete sequence Length = 154520 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 aaagaggcacaggcacaggca 545 ||||||||||||||||||||| Sbjct: 139621 aaagaggcacaggcacaggca 139601
>gb|AC126255.3| Mus musculus BAC clone RP24-218F22 from chromosome 18, complete sequence Length = 166367 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 tgcaaagaggcacaggcacaggcac 546 |||||| |||||||||||||||||| Sbjct: 156001 tgcaaacaggcacaggcacaggcac 155977
>gb|AC095558.10| Rattus norvegicus 18 BAC CH230-8D7 (Children's Hospital Oakland Research Institute) complete sequence Length = 226956 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 532 cacaggcacaggcacctgtgg 552 ||||||||||||||||||||| Sbjct: 219254 cacaggcacaggcacctgtgg 219274
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 140 catcaagatgatcgccgacgc 160 ||||||||||||||||||||| Sbjct: 345417 catcaagatgatcgccgacgc 345437 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 tcaagatgatcgccgacgcg 161 |||||||||||||||||||| Sbjct: 1840483 tcaagatgatcgccgacgcg 1840502
>gb|AC091517.10| Homo sapiens 12 BAC RP11-777M1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172346 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 648 ttctcttcttgtaataattca 668 ||||||||||||||||||||| Sbjct: 101159 ttctcttcttgtaataattca 101139
>emb|BX784028.13| Zebrafish DNA sequence from clone DKEY-40C11 in linkage group 5, complete sequence Length = 230525 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 495 cctgctcctgctcctcaacct 515 ||||||||||||||||||||| Sbjct: 142278 cctgctcctgctcctcaacct 142258
>ref|XM_688139.1| PREDICTED: Danio rerio similar to Jmjd2al protein (LOC564809), mRNA Length = 3789 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 495 cctgctcctgctcctcaacct 515 ||||||||||||||||||||| Sbjct: 838 cctgctcctgctcctcaacct 818
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcacc 547 ||||||||||||||||||||| Sbjct: 24698457 agaggcacaggcacaggcacc 24698437
>emb|BX842598.1| Neurospora crassa DNA linkage group II BAC clone B8L10 Length = 73541 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 ctccagcttttccctctcctc 449 ||||||||||||||||||||| Sbjct: 46647 ctccagcttttccctctcctc 46667
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcacc 547 ||||||||||||||||||||| Sbjct: 54394 agaggcacaggcacaggcacc 54374
>gb|AC151409.2| Mus musculus BAC clone RP24-541K8 from 18, complete sequence Length = 179265 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 aaagaggcacaggcacaggca 545 ||||||||||||||||||||| Sbjct: 34816 aaagaggcacaggcacaggca 34796
>gb|AC117827.6| Mus musculus chromosome 1, clone RP24-88L2, complete sequence Length = 213655 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tcctcctcctcctcttggga 23 |||||||||||||||||||| Sbjct: 57046 tcctcctcctcctcttggga 57027
>gb|AC168092.3| Mus musculus BAC clone RP23-142H1 from chromosome 6, complete sequence Length = 213498 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 28843 agaggcacaggcacaggcac 28824
>ref|XM_465886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1212 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cgccgacgagctccgcgagg 405 |||||||||||||||||||| Sbjct: 591 cgccgacgagctccgcgagg 610
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 9.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 189 acctgcctgcagctcgcgcgccgcgcca 216 ||||||||||||||||||| |||||||| Sbjct: 576856 acctgcctgcagctcgcgc-ccgcgcca 576830
>gb|AC115767.14| Mus musculus chromosome 6, clone RP23-83K15, complete sequence Length = 257790 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 79107 agaggcacaggcacaggcac 79088 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78963 agaggcacaggcacaggcac 78944 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78909 agaggcacaggcacaggcac 78890 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78861 agaggcacaggcacaggcac 78842 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78791 agaggcacaggcacaggcac 78772 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78697 agaggcacaggcacaggcac 78678 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78655 agaggcacaggcacaggcac 78636 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78625 agaggcacaggcacaggcac 78606 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78509 agaggcacaggcacaggcac 78490 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78473 agaggcacaggcacaggcac 78454 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78431 agaggcacaggcacaggcac 78412 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78377 agaggcacaggcacaggcac 78358 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78295 agaggcacaggcacaggcac 78276 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78235 agaggcacaggcacaggcac 78216 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78199 agaggcacaggcacaggcac 78180 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78175 agaggcacaggcacaggcac 78156 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 78139 agaggcacaggcacaggcac 78120
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 acctctaccggtgcttcatg 374 |||||||||||||||||||| Sbjct: 1742528 acctctaccggtgcttcatg 1742547
>gb|AY436655.1| Human rhinovirus 66 polymerase (3D) mRNA, partial cds Length = 468 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 gtaagaccatattttgtgcc 571 |||||||||||||||||||| Sbjct: 143 gtaagaccatattttgtgcc 124
>gb|AC134586.4| Mus musculus BAC clone RP23-304K3 from chromosome 9, complete sequence Length = 166474 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctccagcttttccctctcct 448 |||||||||||||||||||| Sbjct: 52291 ctccagcttttccctctcct 52272
>ref|XM_656191.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3679.2), mRNA Length = 789 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gcgtcctcctcctcctcttg 20 |||||||||||||||||||| Sbjct: 170 gcgtcctcctcctcctcttg 151
>gb|AC161514.4| Mus musculus chromosome 7, clone RP23-378L12, complete sequence Length = 190426 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 103784 agaggcacaggcacaggcac 103803
>gb|AC121525.7| Mus musculus chromosome 5, clone RP23-359D12, complete sequence Length = 188700 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 ccttctacctccagcttttc 440 |||||||||||||||||||| Sbjct: 106578 ccttctacctccagcttttc 106559
>gb|AC132584.5| Mus musculus BAC clone RP24-346B15 from chromosome 7, complete sequence Length = 227856 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 221337 agaggcacaggcacaggcac 221318 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 221031 agaggcacaggcacaggcac 221012 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 219867 agaggcacaggcacaggcac 219848
>gb|AC165959.5| Mus musculus BAC clone RP23-390B24 from chromosome 7, complete sequence Length = 217760 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 169596 agaggcacaggcacaggcac 169577 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 169290 agaggcacaggcacaggcac 169271 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 168126 agaggcacaggcacaggcac 168107
>gb|AC093476.6| Mus musculus chromosome 6, clone RP23-55C15, complete sequence Length = 259659 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 152772 agaggcacaggcacaggcac 152753
>ref|XM_844091.1| PREDICTED: Canis familiaris similar to oxysterol-binding protein-like protein 11, transcript variant 2 (LOC478596), mRNA Length = 3889 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cgtcctcctcctcctcttgg 21 |||||||||||||||||||| Sbjct: 2740 cgtcctcctcctcctcttgg 2721
>gb|AC115883.13| Mus musculus chromosome 3, clone RP24-376N4, complete sequence Length = 180645 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 152035 agaggcacaggcacaggcac 152054
>gb|AY083837.2| Geobacillus stearothermophilus strain ATCC 7954 acetohydroxy acid synthase large subunit (ilvB), acetohydroxy acid synthase small subunit (ilvN), ketol-acid reductoisomerase (ilvC), and 2-isopropylmalate synthase (leuA) genes, complete cds; and isopropylmalate dehydratase (leuC) gene, partial cds Length = 5403 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cggcacgccgacgagctccg 400 |||||||||||||||||||| Sbjct: 4428 cggcacgccgacgagctccg 4409
>gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosome 9, complete sequence Length = 217511 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctccagcttttccctctcct 448 |||||||||||||||||||| Sbjct: 209386 ctccagcttttccctctcct 209367
>gb|AY163384.1| Pseudomonas sp. QDA alginate biosynthesis gene cluster, partial sequence Length = 5316 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gcaccagctccacgccgcgc 255 |||||||||||||||||||| Sbjct: 2097 gcaccagctccacgccgcgc 2078
>ref|XM_847121.1| PREDICTED: Canis familiaris similar to leucine rich repeat and fibronectin type III domain containing 4 (LOC610605), mRNA Length = 1911 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 catggagcagctggaggaga 306 |||||||||||||||||||| Sbjct: 1881 catggagcagctggaggaga 1900
>emb|CR956362.5| Pig DNA sequence from clone CH242-98D1 on chromosome 17, complete sequence Length = 212503 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 cttctacctccagcttttcc 441 |||||||||||||||||||| Sbjct: 17064 cttctacctccagcttttcc 17083
>gb|AC098731.3| Mus musculus BAC clone RP23-3L10 from 9, complete sequence Length = 220184 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 179297 agaggcacaggcacaggcac 179316
>emb|CR702424.2|CNS0G4XW Tetraodon nigroviridis full-length cDNA Length = 1107 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 604 gaagtacaccttggcactgtattt 627 ||||||| |||||||||||||||| Sbjct: 718 gaagtactccttggcactgtattt 695
>emb|CR688076.1|CNS0FTVC Tetraodon nigroviridis full-length cDNA Length = 1412 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 604 gaagtacaccttggcactgtattt 627 ||||||| |||||||||||||||| Sbjct: 696 gaagtactccttggcactgtattt 673
>emb|CR683323.2|CNS0FQ7B Tetraodon nigroviridis full-length cDNA Length = 1439 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 604 gaagtacaccttggcactgtattt 627 ||||||| |||||||||||||||| Sbjct: 703 gaagtactccttggcactgtattt 680
>gb|AC101848.8| Mus musculus chromosome 1, clone RP23-267J24, complete sequence Length = 218654 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 180821 agaggcacaggcacaggcac 180840 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 180785 agaggcacaggcacaggcac 180804 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 180707 agaggcacaggcacaggcac 180726 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 180641 agaggcacaggcacaggcac 180660
>gb|AC115917.10| Mus musculus chromosome 1, clone RP24-488H6, complete sequence Length = 186588 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 164321 agaggcacaggcacaggcac 164302
>emb|AL590710.14| Human DNA sequence from clone RP11-153P4 on chromosome 9 Contains the 3' end of the VAV2 gene for vav 2 oncogene, the 5' end of the SARDH gene for sarcosine dehydrogenase (SAR, SDH, SARD, DMGDHL1) and a CpG island, complete sequence Length = 118671 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 cacaggcacaggcacctgtg 551 |||||||||||||||||||| Sbjct: 109400 cacaggcacaggcacctgtg 109381
>gb|AC107608.6| Rattus norvegicus 1 BAC CH230-204P6 (Children's Hospital Oakland Research Institute) complete sequence Length = 225030 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 128049 agaggcacaggcacaggcac 128030
>emb|AL035686.15|HS965N20 Human DNA sequence from clone RP5-965N20 on chromosome 20q13.13-13.2 Contains ESTs, STSs and GSSs, complete sequence Length = 127197 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 419 caccttctacctccagcttttccctctc 446 |||||||| |||||| |||||||||||| Sbjct: 58356 caccttctccctccaccttttccctctc 58329
>emb|AL109983.2|HSJ718P11 Human DNA sequence from clone RP4-718P11 on chromosome 20p12.1-12.3 Contains part of the SPTLC2L gene for serine palmitoyltransferase long chain base subunit 2-like (aminotransferase 2), complete sequence Length = 104913 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 ctacctccagcttttccctc 444 |||||||||||||||||||| Sbjct: 85115 ctacctccagcttttccctc 85134
>gb|AC151282.3| Mus musculus BAC clone RP23-461H1 from chromosome 17, complete sequence Length = 185503 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 103189 agaggcacaggcacaggcac 103208
>emb|AJ440494.1|IBA440494 Pseudomonas sp. BA2.5 partial nirS gene for nitrite reductase, isolate BA2.5 Length = 830 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 ctacgtcgacaccaccctca 471 |||||||||||||||||||| Sbjct: 553 ctacgtcgacaccaccctca 572
>emb|AJ400878.1|MMU400878 Mus musculus Ascl3 gene, Cegp1 gene, D7H11orf14 gene, D7H11orf15 gene, D7H11orf16 gene and C11orf17 gene Length = 234169 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 41521 agaggcacaggcacaggcac 41540 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 40357 agaggcacaggcacaggcac 40376 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 40051 agaggcacaggcacaggcac 40070
>gb|AC125165.5| Mus musculus BAC clone RP24-429K13 from chromosome 16, complete sequence Length = 156815 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 42198 agaggcacaggcacaggcac 42179 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 41846 agaggcacaggcacaggcac 41827
>gb|AC055782.9| Homo sapiens chromosome 15, clone RP11-528P19, complete sequence Length = 172697 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 cttttccctctcctcagcta 454 |||||||||||||||||||| Sbjct: 70472 cttttccctctcctcagcta 70453
>gb|AC160936.2| Mus musculus BAC clone RP23-300E17 from chromosome 12, complete sequence Length = 198897 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 187037 agaggcacaggcacaggcac 187018
>gb|AC022254.11| Homo sapiens chromosome 15, clone RP11-282M16, complete sequence Length = 188601 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 cttttccctctcctcagcta 454 |||||||||||||||||||| Sbjct: 43590 cttttccctctcctcagcta 43609
>gb|AC160631.10| Uncultured bacterium zdt-39a1 clone zdt-39a1, complete sequence Length = 34608 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gggctcatcaagatgatcgc 154 |||||||||||||||||||| Sbjct: 8576 gggctcatcaagatgatcgc 8595
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 ggcacaggcacaggcacctg 549 |||||||||||||||||||| Sbjct: 201016 ggcacaggcacaggcacctg 201035
>dbj|AK096859.1| Homo sapiens cDNA FLJ39540 fis, clone PUAEN2008314, highly similar to Homo sapiens SWAP-70 mRNA Length = 2062 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ccatggagcagctggaggag 305 |||||||||||||||||||| Sbjct: 1425 ccatggagcagctggaggag 1444
>gb|AC007953.21| Homo sapiens 3 BAC RP11-2L8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152210 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 ttcatgcaaagaggcacagg 537 |||||||||||||||||||| Sbjct: 52893 ttcatgcaaagaggcacagg 52874
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 cgcgccgcgccaggatgatc 224 |||||||||||||||||||| Sbjct: 1913791 cgcgccgcgccaggatgatc 1913772
>gb|AC103549.6| Homo sapiens 3 BAC RP11-795G18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165139 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 ttcatgcaaagaggcacagg 537 |||||||||||||||||||| Sbjct: 161730 ttcatgcaaagaggcacagg 161749
>gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome 13, complete sequence Length = 192541 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tcctcctcctcctcttggga 23 |||||||||||||||||||| Sbjct: 65851 tcctcctcctcctcttggga 65832
>gb|AC159203.2| Mus musculus BAC clone RP23-239O13 from chromosome 13, complete sequence Length = 181617 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 104626 agaggcacaggcacaggcac 104645
>gb|AC161370.3| Mus musculus BAC clone RP23-437J23 from chromosome 9, complete sequence Length = 187354 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 155707 agaggcacaggcacaggcac 155688
>gb|AC158996.2| Mus musculus BAC clone RP24-137I10 from chromosome 9, complete sequence Length = 154654 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tcctcctcctcctcttggga 23 |||||||||||||||||||| Sbjct: 98899 tcctcctcctcctcttggga 98880
>dbj|AK009010.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2300002G24 product:similar to NICE-1 PROTEIN [Homo sapiens], full insert sequence Length = 717 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gcgtcctcctcctcctcttg 20 |||||||||||||||||||| Sbjct: 176 gcgtcctcctcctcctcttg 195
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cgccgacgagctccgcgagg 405 |||||||||||||||||||| Sbjct: 18105538 cgccgacgagctccgcgagg 18105557
>gb|AC118019.11| Mus musculus chromosome 8, clone RP23-458N4, complete sequence Length = 185749 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 154612 agaggcacaggcacaggcac 154631
>gb|AC119271.11| Mus musculus chromosome 7, clone RP24-373F15, complete sequence Length = 178814 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 129455 agaggcacaggcacaggcac 129474
>gb|AC154659.2| Mus musculus BAC clone RP24-269K6 from chromosome 17, complete sequence Length = 177071 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 112658 agaggcacaggcacaggcac 112677
>gb|AE009573.1| Brucella melitensis 16M chromosome I, section 130 of 195 of the complete sequence Length = 12202 Score = 40.1 bits (20), Expect = 9.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 189 acctgcctgcagctcgcgcgccgcgcca 216 ||||||||||||||||||| |||||||| Sbjct: 5387 acctgcctgcagctcgcgc-ccgcgcca 5413
>gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174100 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 103653 agaggcacaggcacaggcac 103634
>gb|AC073641.3| Homo sapiens BAC clone RP11-368E14 from 2, complete sequence Length = 197709 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 aaacctgctcctgctcctca 511 |||||||||||||||||||| Sbjct: 54075 aaacctgctcctgctcctca 54094
>gb|AC096670.1| Homo sapiens BAC clone RP11-438K19 from 2, complete sequence Length = 181497 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 40079 agaggcacaggcacaggcac 40060
>gb|AC105303.23| Mus musculus strain C57BL/6J chromosome 2 clone rp23-60i12, complete sequence Length = 176206 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 49158 agaggcacaggcacaggcac 49177
>ref|NM_008836.2| Mus musculus per-hexamer repeat gene 5 (Phxr5), mRNA Length = 2019 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 1987 agaggcacaggcacaggcac 2006 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 823 agaggcacaggcacaggcac 842 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 517 agaggcacaggcacaggcac 536
>gb|AE004636.1| Pseudomonas aeruginosa PAO1, section 197 of 529 of the complete genome Length = 13280 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 caccagctccacgccgcgca 256 |||||||||||||||||||| Sbjct: 9272 caccagctccacgccgcgca 9291
>ref|NM_028798.1| Mus musculus RIKEN cDNA 2300002G24 gene (2300002G24Rik), mRNA Length = 717 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gcgtcctcctcctcctcttg 20 |||||||||||||||||||| Sbjct: 176 gcgtcctcctcctcctcttg 195
>gb|AC159292.3| Mus musculus BAC clone RP23-290D9 from chromosome 10, complete sequence Length = 224627 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 114845 agaggcacaggcacaggcac 114864
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 cggcacgccgacgagctccg 400 |||||||||||||||||||| Sbjct: 2678306 cggcacgccgacgagctccg 2678325
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 9.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 189 acctgcctgcagctcgcgcgccgcgcca 216 ||||||||||||||||||| |||||||| Sbjct: 598371 acctgcctgcagctcgcgc-ccgcgcca 598345
>gb|AF134894.1|AF134894 Homo sapiens SWAP-70 homolog mRNA, complete cds Length = 3719 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ccatggagcagctggaggag 305 |||||||||||||||||||| Sbjct: 1570 ccatggagcagctggaggag 1589
>emb|AL772351.12| Mouse DNA sequence from clone RP24-199N10 on chromosome 4, complete sequence Length = 78426 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctggctggctctgctcctcc 45 |||||||||||||||||||| Sbjct: 37309 ctggctggctctgctcctcc 37290
>gb|BC060280.1| Mus musculus RIKEN cDNA 2300002G24 gene, mRNA (cDNA clone MGC:69983 IMAGE:30290660), complete cds Length = 751 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gcgtcctcctcctcctcttg 20 |||||||||||||||||||| Sbjct: 154 gcgtcctcctcctcctcttg 173
>emb|X02966.1|MMURFPER Mus musculus DNA sequence homologous to Drosophila per-fragment (clock gene) Length = 2465 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 2196 agaggcacaggcacaggcac 2215 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 1032 agaggcacaggcacaggcac 1051 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 726 agaggcacaggcacaggcac 745
>emb|BX649336.2| Mouse DNA sequence from clone RP24-111M20 on chromosome 2, complete sequence Length = 53872 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 8086 agaggcacaggcacaggcac 8105
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cgccgacgagctccgcgagg 405 |||||||||||||||||||| Sbjct: 28939 cgccgacgagctccgcgagg 28958
>dbj|AK027131.1| Homo sapiens cDNA: FLJ23478 fis, clone HUV00728 Length = 3197 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ccatggagcagctggaggag 305 |||||||||||||||||||| Sbjct: 1026 ccatggagcagctggaggag 1045
>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3), anthocyanin biosynthesis regulatory protein Pl1_B73 (Z576C20.4), putative growth-regulating factor 1 (Z576C20.6), and putative aminoalcoholphosphotransferase (Z576C20.14) genes, complete cds; and putative receptor protein kinase (Z576C20.21) gene, partial cds Length = 155173 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 aggcacaggcacaggcacct 548 |||||||||||||||||||| Sbjct: 108088 aggcacaggcacaggcacct 108107
>gb|AC103353.7| Mus musculus chromosome 12, clone RP23-450G14, complete sequence Length = 191903 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 100224 agaggcacaggcacaggcac 100243
>dbj|AP000826.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-709H4, complete sequence Length = 167660 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agagccacctgcctgcagct 202 |||||||||||||||||||| Sbjct: 124594 agagccacctgcctgcagct 124575
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 450 agctacgtcgacaccaccctcacc 473 |||||||||||| ||||||||||| Sbjct: 4659925 agctacgtcgacgccaccctcacc 4659902
>emb|AL845487.5| Mouse DNA sequence from clone RP23-288M4 on chromosome 2, complete sequence Length = 120057 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 54623 agaggcacaggcacaggcac 54604 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 54457 agaggcacaggcacaggcac 54438
>gb|AC154196.1| Mus musculus BAC clone RP24-76I6 from 16, complete sequence Length = 207701 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 38011 agaggcacaggcacaggcac 38030 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 37833 agaggcacaggcacaggcac 37852 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 37605 agaggcacaggcacaggcac 37624
>gb|AC134893.4| Mus musculus BAC clone RP24-251N8 from 9, complete sequence Length = 166674 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 116426 agaggcacaggcacaggcac 116407
>gb|AC129076.6| Mus musculus BAC clone RP24-494O16 from 6, complete sequence Length = 166003 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95977 agaggcacaggcacaggcac 95996 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95923 agaggcacaggcacaggcac 95942 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95881 agaggcacaggcacaggcac 95900 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95845 agaggcacaggcacaggcac 95864 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95729 agaggcacaggcacaggcac 95748 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95699 agaggcacaggcacaggcac 95718 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95657 agaggcacaggcacaggcac 95676 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95563 agaggcacaggcacaggcac 95582 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95493 agaggcacaggcacaggcac 95512 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95445 agaggcacaggcacaggcac 95464 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95391 agaggcacaggcacaggcac 95410 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 95247 agaggcacaggcacaggcac 95266
>gb|AC122854.4| Mus musculus BAC clone RP23-178L9 from 1, complete sequence Length = 197331 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 51276 agaggcacaggcacaggcac 51257
>gb|AC135289.3| Mus musculus BAC clone RP23-279D12 from 3, complete sequence Length = 180967 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gcgtcctcctcctcctcttg 20 |||||||||||||||||||| Sbjct: 155980 gcgtcctcctcctcctcttg 155999
>gb|AC127693.4| Mus musculus BAC clone RP23-135G19 from 17, complete sequence Length = 223894 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 37743 agaggcacaggcacaggcac 37762
>gb|AC131686.4| Mus musculus BAC clone RP23-375H15 from 3, complete sequence Length = 179353 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 170008 agaggcacaggcacaggcac 169989
>gb|AC132247.3| Mus musculus BAC clone RP24-424J1 from 19, complete sequence Length = 187078 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 102215 agaggcacaggcacaggcac 102196
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 9.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 189 acctgcctgcagctcgcgcgccgcgcca 216 ||||||||||||||||||| |||||||| Sbjct: 594668 acctgcctgcagctcgcgc-ccgcgcca 594642
>emb|CT010571.7| Mouse DNA sequence from clone RP23-300L8 on chromosome 16, complete sequence Length = 218760 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 114680 agaggcacaggcacaggcac 114661 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 114458 agaggcacaggcacaggcac 114439 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 114280 agaggcacaggcacaggcac 114261
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 cctgctcctgctcctcaacc 514 |||||||||||||||||||| Sbjct: 2108962 cctgctcctgctcctcaacc 2108981
>gb|AC169673.3| Mus musculus chromosome 1, clone RP24-188K18, complete sequence Length = 166442 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 46956 agaggcacaggcacaggcac 46975 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 46920 agaggcacaggcacaggcac 46939 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 46842 agaggcacaggcacaggcac 46861 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 46776 agaggcacaggcacaggcac 46795
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 cgtcgacaccaccctcacct 474 |||||||||||||||||||| Sbjct: 171704 cgtcgacaccaccctcacct 171723
>emb|AL807824.10| Mouse DNA sequence from clone RP23-37J21 on chromosome 11, complete sequence Length = 178597 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 aggcacaggcacaggcacct 548 |||||||||||||||||||| Sbjct: 82048 aggcacaggcacaggcacct 82029
>emb|X06974.1|MMPERIO9 Mouse hexamer repeat sequence (s7) homologous to Drosophila 'period' gene Length = 1133 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 603 agaggcacaggcacaggcac 622
>emb|X06970.1|MMPERIO5 Mouse hexamer repeat sequence (m24) homologous to Drosophila 'period' gene Length = 706 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 250 agaggcacaggcacaggcac 269
>emb|X06969.1|MMPERIO4 Mouse hexamer repeat sequence (l7) homologous to Drosophila 'period' gene Length = 400 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 200 agaggcacaggcacaggcac 219
>emb|X06967.1|MMPERIO1 Mouse hexamer repeat sequence (l17) homologous to Drosophila 'period' gene Length = 1036 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 959 agaggcacaggcacaggcac 978 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 923 agaggcacaggcacaggcac 942 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 899 agaggcacaggcacaggcac 918 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 863 agaggcacaggcacaggcac 882 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 803 agaggcacaggcacaggcac 822 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 721 agaggcacaggcacaggcac 740 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 667 agaggcacaggcacaggcac 686 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 625 agaggcacaggcacaggcac 644 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 589 agaggcacaggcacaggcac 608 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 525 agaggcacaggcacaggcac 544 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 495 agaggcacaggcacaggcac 514 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 453 agaggcacaggcacaggcac 472 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 359 agaggcacaggcacaggcac 378 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 289 agaggcacaggcacaggcac 308 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 241 agaggcacaggcacaggcac 260 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 187 agaggcacaggcacaggcac 206 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 43 agaggcacaggcacaggcac 62
>emb|AL845313.9| Mouse DNA sequence from clone RP23-202C2 on chromosome 2, complete sequence Length = 214895 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 167632 agaggcacaggcacaggcac 167651 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 167566 agaggcacaggcacaggcac 167585 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 167452 agaggcacaggcacaggcac 167471
>emb|AL805952.11| Mouse DNA sequence from clone RP23-125H10 on chromosome 4, complete sequence Length = 199540 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 104433 agaggcacaggcacaggcac 104414
>emb|AJ403330.1|MMU403330 M.musculus DNA for desmin-binding fragment DesB33 Length = 744 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 64 agaggcacaggcacaggcac 45
>dbj|D87658.1| Corallina pilulifera mRNA for vanadium-dependent bromoperoxidase 2, complete cds Length = 2029 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ggctctgctcctccaagatt 51 |||||||||||||||||||| Sbjct: 1847 ggctctgctcctccaagatt 1828
>dbj|AB014540.1| Homo sapiens mRNA for KIAA0640 protein, partial cds Length = 4824 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ccatggagcagctggaggag 305 |||||||||||||||||||| Sbjct: 1551 ccatggagcagctggaggag 1570
>emb|AL844557.3| Mouse DNA sequence from clone RP23-203N14 on chromosome 2, complete sequence Length = 122538 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 agaggcacaggcacaggcac 546 |||||||||||||||||||| Sbjct: 36023 agaggcacaggcacaggcac 36004 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,298,289 Number of Sequences: 3902068 Number of extensions: 7298289 Number of successful extensions: 520436 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 514570 Number of HSP's gapped (non-prelim): 5859 length of query: 672 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 649 effective length of database: 17,143,297,704 effective search space: 11126000209896 effective search space used: 11126000209896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)