ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal36b16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464397.1| Oryza sativa (japonica cultivar-group), mRNA 268 1e-68
2dbj|AK120425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 1e-68
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 222 7e-55
4dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic D... 222 7e-55
5dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic D... 222 7e-55
6gb|BT017715.1| Zea mays clone EL01N0446G10.c mRNA sequence 206 4e-50
7ref|XM_467595.1| Oryza sativa (japonica cultivar-group), mRNA 84 4e-13
8dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
9ref|NM_181804.1| Homo sapiens protein kinase (cAMP-dependent, ca... 44 0.35
10ref|NM_181805.1| Homo sapiens protein kinase (cAMP-dependent, ca... 44 0.35
11ref|NM_007066.3| Homo sapiens protein kinase (cAMP-dependent, ca... 44 0.35
12gb|BC104256.1| Homo sapiens protein kinase (cAMP-dependent, cata... 44 0.35
13gb|BC104257.1| Homo sapiens protein kinase (cAMP-dependent, cata... 44 0.35
14emb|Z97053.2|HS179M20 Human DNA sequence from clone RP1-179M20 o... 44 0.35
15gb|AF115966.1| Homo sapiens protein kinase inhibitor gamma mRNA,... 44 0.35
16emb|CR623057.1| full-length cDNA clone CS0DI056YO14 of Placenta ... 44 0.35
17gb|AF182032.1|AF182032 Homo sapiens protein kinase inhibitor gam... 44 0.35
18dbj|AB019517.1| Homo sapiens PKIG mRNA for protein kinase inhibi... 44 0.35
19gb|AF489515.1| Streptomyces thermovulgaris malate synthase (aceB... 42 1.4
20gb|AC124391.3| Mus musculus BAC clone RP24-439L13 from chromosom... 42 1.4
21gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.4
22gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.4
23emb|AM181475.1| Microbacterium aerolatum partial gyrB gene for D... 42 1.4
24dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.4
25gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
26gb|AY242833.1| Bosea minatitlanensis strain AMX51 RNA polymerase... 40 5.4
27ref|XM_367034.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 5.4
28gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 5.4
29emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.4
30emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 5.4
31emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 5.4
32emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 5.4
33emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluste... 40 5.4
34gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, compl... 40 5.4
35gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence 40 5.4
36dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
37dbj|AK069995.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
38gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
39emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on ch... 40 5.4 
>ref|XM_464397.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 722

 Score =  268 bits (135), Expect = 1e-68
 Identities = 199/221 (90%)
 Strand = Plus / Plus

                                                                       
Query: 139 aagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactccatnttccgg 198
           ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 261 aaggggtacaatgtgcagatcgtggtggacgagaacgagggggaggagtccatcttccgg 320

                                                                       
Query: 199 cgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgccgccgccgg 258
           || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| 
Sbjct: 321 cggttccggcgggaggtgatgagggccggcgtgctccaggagatcaagcgccgccgccgc 380

                                                                       
Query: 259 cacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgccgcaaccgn 318
            |||||| ||  |||||| ||   |  |||||||||||||||||||||||||||||||| 
Sbjct: 381 tacgagagcaagaaggacgagcgcaagcgcaaggcccgcgaggccggccgccgcaaccgc 440

                                                    
Query: 319 cgcaggcgtatgatggatgatcgtaggttcccagaagacga 359
           ||||||||||||||||| || | ||||||||||||||||||
Sbjct: 441 cgcaggcgtatgatggaggagcctaggttcccagaagacga 481



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 32  tgagcgccctgctccagcttcccctggctccgttctcgggga 73
           ||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 145 tgagcgcgctgctgcagcttcccctggccccgttctccggga 186
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>dbj|AK120425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095G03, full
           insert sequence
          Length = 722

 Score =  268 bits (135), Expect = 1e-68
 Identities = 199/221 (90%)
 Strand = Plus / Plus

                                                                       
Query: 139 aagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactccatnttccgg 198
           ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 261 aaggggtacaatgtgcagatcgtggtggacgagaacgagggggaggagtccatcttccgg 320

                                                                       
Query: 199 cgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgccgccgccgg 258
           || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| 
Sbjct: 321 cggttccggcgggaggtgatgagggccggcgtgctccaggagatcaagcgccgccgccgc 380

                                                                       
Query: 259 cacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgccgcaaccgn 318
            |||||| ||  |||||| ||   |  |||||||||||||||||||||||||||||||| 
Sbjct: 381 tacgagagcaagaaggacgagcgcaagcgcaaggcccgcgaggccggccgccgcaaccgc 440

                                                    
Query: 319 cgcaggcgtatgatggatgatcgtaggttcccagaagacga 359
           ||||||||||||||||| || | ||||||||||||||||||
Sbjct: 441 cgcaggcgtatgatggaggagcctaggttcccagaagacga 481



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 32  tgagcgccctgctccagcttcccctggctccgttctcgggga 73
           ||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 145 tgagcgcgctgctgcagcttcccctggccccgttctccggga 186
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  222 bits (112), Expect = 7e-55
 Identities = 167/186 (89%)
 Strand = Plus / Minus

                                                                           
Query: 139     aagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactccatnttccgg 198
               ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 4937537 aaggggtacaatgtgcagatcgtggtggacgagaacgagggggaggagtccatcttccgg 4937478

                                                                           
Query: 199     cgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgccgccgccgg 258
               || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| 
Sbjct: 4937477 cggttccggcgggaggtgatgagggccggcgtgctccaggagatcaagcgccgccgccgc 4937418

                                                                           
Query: 259     cacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgccgcaaccgn 318
                |||||| ||  |||||| ||   |  |||||||||||||||||||||||||||||||| 
Sbjct: 4937417 tacgagagcaagaaggacgagcgcaagcgcaaggcccgcgaggccggccgccgcaaccgc 4937358

                     
Query: 319     cgcagg 324
               ||||||
Sbjct: 4937357 cgcagg 4937352



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/85 (88%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                            
Query: 179      gggaggactccatnttccggcgcttccggcgggaggtgatgaaggccggcctgctccagg 238
                ||||||| ||||| |||||||| ||||||| ||||||||||| |||||||  ||| ||||
Sbjct: 30358796 gggaggagtccatcttccggcggttccggcaggaggtgatgacggccggcgcgct-cagg 30358854

                                         
Query: 239      agatcaagcgccgccgccggcacga 263
                ||||||| |||||||||||| ||||
Sbjct: 30358855 agatcaaacgccgccgccggtacga 30358879



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 320     gcaggcgtatgatggatgatcgtaggttcccagaagacga 359
               |||||||||||||||| || | ||||||||||||||||||
Sbjct: 4936807 gcaggcgtatgatggaggagcctaggttcccagaagacga 4936768



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                         
Query: 32      tgagcgccctgctccagcttcccctggctccgttctcgggga 73
               ||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 4937653 tgagcgcgctgctgcagcttcccctggccccgttctccggga 4937612



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 294      ccgcgaggccggccgccgca 313
                ||||||||||||||||||||
Sbjct: 30358903 ccgcgaggccggccgccgca 30358922
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>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBb0031B09
          Length = 132729

 Score =  222 bits (112), Expect = 7e-55
 Identities = 167/186 (89%)
 Strand = Plus / Minus

                                                                        
Query: 139  aagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactccatnttccgg 198
            ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 8663 aaggggtacaatgtgcagatcgtggtggacgagaacgagggggaggagtccatcttccgg 8604

                                                                        
Query: 199  cgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgccgccgccgg 258
            || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| 
Sbjct: 8603 cggttccggcgggaggtgatgagggccggcgtgctccaggagatcaagcgccgccgccgc 8544

                                                                        
Query: 259  cacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgccgcaaccgn 318
             |||||| ||  |||||| ||   |  |||||||||||||||||||||||||||||||| 
Sbjct: 8543 tacgagagcaagaaggacgagcgcaagcgcaaggcccgcgaggccggccgccgcaaccgc 8484

                  
Query: 319  cgcagg 324
            ||||||
Sbjct: 8483 cgcagg 8478



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 320  gcaggcgtatgatggatgatcgtaggttcccagaagacga 359
            |||||||||||||||| || | ||||||||||||||||||
Sbjct: 7933 gcaggcgtatgatggaggagcctaggttcccagaagacga 7894



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 32   tgagcgccctgctccagcttcccctggctccgttctcgggga 73
            ||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 8779 tgagcgcgctgctgcagcttcccctggccccgttctccggga 8738
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>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1145_F01
          Length = 113755

 Score =  222 bits (112), Expect = 7e-55
 Identities = 167/186 (89%)
 Strand = Plus / Minus

                                                                         
Query: 139   aagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactccatnttccgg 198
             ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 82276 aaggggtacaatgtgcagatcgtggtggacgagaacgagggggaggagtccatcttccgg 82217

                                                                         
Query: 199   cgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgccgccgccgg 258
             || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| 
Sbjct: 82216 cggttccggcgggaggtgatgagggccggcgtgctccaggagatcaagcgccgccgccgc 82157

                                                                         
Query: 259   cacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgccgcaaccgn 318
              |||||| ||  |||||| ||   |  |||||||||||||||||||||||||||||||| 
Sbjct: 82156 tacgagagcaagaaggacgagcgcaagcgcaaggcccgcgaggccggccgccgcaaccgc 82097

                   
Query: 319   cgcagg 324
             ||||||
Sbjct: 82096 cgcagg 82091



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 320   gcaggcgtatgatggatgatcgtaggttcccagaagacga 359
             |||||||||||||||| || | ||||||||||||||||||
Sbjct: 81546 gcaggcgtatgatggaggagcctaggttcccagaagacga 81507



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 32    tgagcgccctgctccagcttcccctggctccgttctcgggga 73
             ||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct: 82392 tgagcgcgctgctgcagcttcccctggccccgttctccggga 82351
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>gb|BT017715.1| Zea mays clone EL01N0446G10.c mRNA sequence
          Length = 632

 Score =  206 bits (104), Expect = 4e-50
 Identities = 195/226 (86%)
 Strand = Plus / Plus

                                                                       
Query: 131 tggccgctaagggctacaacgtgcagatcgtggtggacgagaacgagggggaggactcca 190
           ||||||| ||||| ||||| |||| |||| ||||||||||||||||||||||||| ||||
Sbjct: 151 tggccgccaaggggtacaatgtgcggatcctggtggacgagaacgagggggaggagtcca 210

                                                                       
Query: 191 tnttccggcgcttccggcgggaggtgatgaaggccggcctgctccaggagatcaagcgcc 250
           | |||||||| |||||||||| |||||||  ||||||| |||| ||||||||||||||||
Sbjct: 211 tcttccggcggttccggcggggggtgatgcgggccggcgtgctgcaggagatcaagcgcc 270

                                                                       
Query: 251 gccgccggcacgagaacaccaaggacaagaagattcgcaaggcccgcgaggccggccgcc 310
           | ||  || | |||| ||  | |||| ||||||  |||||||| ||||||||||| ||||
Sbjct: 271 gtcggaggtatgagagcaagacggacgagaagaagcgcaaggcgcgcgaggccgggcgcc 330

                                                         
Query: 311 gcaaccgncgcaggcgtatgatggatgatcgtaggttcccagaaga 356
           ||||||| |||||||||||||||||||| |  ||||||||||||||
Sbjct: 331 gcaaccgccgcaggcgtatgatggatgagccgaggttcccagaaga 376
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>ref|XM_467595.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1551

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/85 (88%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                       
Query: 179 gggaggactccatnttccggcgcttccggcgggaggtgatgaaggccggcctgctccagg 238
           ||||||| ||||| |||||||| ||||||| ||||||||||| |||||||  ||| ||||
Sbjct: 60  gggaggagtccatcttccggcggttccggcaggaggtgatgacggccggcgcgct-cagg 118

                                    
Query: 239 agatcaagcgccgccgccggcacga 263
           ||||||| |||||||||||| ||||
Sbjct: 119 agatcaaacgccgccgccggtacga 143



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 ccgcgaggccggccgccgca 313
           ||||||||||||||||||||
Sbjct: 167 ccgcgaggccggccgccgca 186
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>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0072H09
          Length = 160541

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 75/85 (88%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                         
Query: 179   gggaggactccatnttccggcgcttccggcgggaggtgatgaaggccggcctgctccagg 238
             ||||||| ||||| |||||||| ||||||| ||||||||||| |||||||  ||| ||||
Sbjct: 39656 gggaggagtccatcttccggcggttccggcaggaggtgatgacggccggcgcgct-cagg 39714

                                      
Query: 239   agatcaagcgccgccgccggcacga 263
             ||||||| |||||||||||| ||||
Sbjct: 39715 agatcaaacgccgccgccggtacga 39739



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ccgcgaggccggccgccgca 313
             ||||||||||||||||||||
Sbjct: 39763 ccgcgaggccggccgccgca 39782
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>ref|NM_181804.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma (PKIG), transcript variant 3, mRNA
          Length = 1353

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 359 agggagactcagaggctgtgag 380
           ||||||||||||||||||||||
Sbjct: 504 agggagactcagaggctgtgag 525
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>ref|NM_181805.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma (PKIG), transcript variant 1, mRNA
          Length = 1458

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 359 agggagactcagaggctgtgag 380
           ||||||||||||||||||||||
Sbjct: 609 agggagactcagaggctgtgag 630
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>ref|NM_007066.3| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma (PKIG), transcript variant 2, mRNA
          Length = 1206

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 359 agggagactcagaggctgtgag 380
           ||||||||||||||||||||||
Sbjct: 357 agggagactcagaggctgtgag 378
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>gb|BC104256.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma, transcript variant 2, mRNA (cDNA clone MGC:126458
           IMAGE:40035945), complete cds
          Length = 694

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 359 agggagactcagaggctgtgag 380
           ||||||||||||||||||||||
Sbjct: 345 agggagactcagaggctgtgag 366
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>gb|BC104257.1| Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor
           gamma, transcript variant 2, mRNA (cDNA clone MGC:126459
           IMAGE:40035946), complete cds
          Length = 694

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 359 agggagactcagaggctgtgag 380
           ||||||||||||||||||||||
Sbjct: 345 agggagactcagaggctgtgag 366
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>emb|Z97053.2|HS179M20 Human DNA sequence from clone RP1-179M20 on chromosome 20 Contains the 3'
              end of the C20orf121 gene for chromosome 20 open reading
              frame 121, the TDE1 gene for tumour differentially
              expressed 1, the PKIG gene for protein kinase
              (cAMP-dependent, catalytic) inhibitor gamma, the 3' end of
              the ADA gene for adenosine deaminase and two CpG islands,
              complete sequence
          Length = 147708

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 359    agggagactcagaggctgtgag 380
              ||||||||||||||||||||||
Sbjct: 131542 agggagactcagaggctgtgag 131563
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>gb|AF115966.1| Homo sapiens protein kinase inhibitor gamma mRNA, complete cds
          Length = 1185

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 359 agggagactcagaggctgtgag 380
           ||||||||||||||||||||||
Sbjct: 333 agggagactcagaggctgtgag 354
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>emb|CR623057.1| full-length cDNA clone CS0DI056YO14 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1124

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 359 agggagactcagaggctgtgag 380
           ||||||||||||||||||||||
Sbjct: 303 agggagactcagaggctgtgag 324
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>gb|AF182032.1|AF182032 Homo sapiens protein kinase inhibitor gamma (PKIG) mRNA, complete
           cds
          Length = 1073

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 359 agggagactcagaggctgtgag 380
           ||||||||||||||||||||||
Sbjct: 225 agggagactcagaggctgtgag 246
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>dbj|AB019517.1| Homo sapiens PKIG mRNA for protein kinase inhibitor gamma, complete
           cds
          Length = 923

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 359 agggagactcagaggctgtgag 380
           ||||||||||||||||||||||
Sbjct: 84  agggagactcagaggctgtgag 105
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>gb|AF489515.1| Streptomyces thermovulgaris malate synthase (aceB) gene, complete cds
          Length = 1626

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 202  ttccggcgggaggtgatgaaggccg 226
            ||||||||||||| |||||||||||
Sbjct: 1031 ttccggcgggaggggatgaaggccg 1007
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>gb|AC124391.3| Mus musculus BAC clone RP24-439L13 from chromosome 18, complete
             sequence
          Length = 153492

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 266   acaccaaggacaagaagattc 286
             |||||||||||||||||||||
Sbjct: 48238 acaccaaggacaagaagattc 48258
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 154     cagatcgtggtggacgagaac 174
               |||||||||||||||||||||
Sbjct: 5144815 cagatcgtggtggacgagaac 5144835
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 219     gaaggccggcctgctccaggagatc 243
               ||||||| |||||||||||||||||
Sbjct: 2410754 gaaggcccgcctgctccaggagatc 2410730
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>emb|AM181475.1| Microbacterium aerolatum partial gyrB gene for DNA gyrase subunit
           B, type strain DSM 14217
          Length = 1101

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 286 cgcaaggcccgcgaggccggccgccgcaa 314
           ||||||||||||||| ||| |||||||||
Sbjct: 812 cgcaaggcccgcgagaccgcccgccgcaa 840
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 240    gatcaagcgccgccgccggcacgag 264
              ||||| |||||||||||||||||||
Sbjct: 699261 gatcatgcgccgccgccggcacgag 699285
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>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0080I08, complete sequence
          Length = 197156

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   cccgcgaggccggccgccgc 312
             ||||||||||||||||||||
Sbjct: 80700 cccgcgaggccggccgccgc 80719
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>gb|AY242833.1| Bosea minatitlanensis strain AMX51 RNA polymerase beta subunit (rpoB)
            gene, complete cds
          Length = 4122

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  aggccggcctgctccaggag 240
            ||||||||||||||||||||
Sbjct: 3662 aggccggcctgctccaggag 3643
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>ref|XM_367034.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG03110.4) partial mRNA
          Length = 918

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 148 aacgtgcagatcgtggtggacgag 171
           |||||||||||||| |||||||||
Sbjct: 490 aacgtgcagatcgtcgtggacgag 513
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 215     tgatgaaggccggcctgctc 234
               ||||||||||||||||||||
Sbjct: 1921226 tgatgaaggccggcctgctc 1921245
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>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    aggcccgcgaggccggccgc 309
              ||||||||||||||||||||
Sbjct: 175622 aggcccgcgaggccggccgc 175641
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   aggcccgcgaggccggccgc 309
             ||||||||||||||||||||
Sbjct: 87615 aggcccgcgaggccggccgc 87634
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>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  aggcccgcgaggccggccgc 309
            ||||||||||||||||||||
Sbjct: 9164 aggcccgcgaggccggccgc 9183
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>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   ccgcgaggccggccgccgca 313
             ||||||||||||||||||||
Sbjct: 90580 ccgcgaggccggccgccgca 90561
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>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of
            glycopeptide antibiotic A40926, strain ATCC 39727
          Length = 89153

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 293  cccgcgaggccggccgccgcaacc 316
            ||||||||| ||||||||||||||
Sbjct: 1524 cccgcgaggtcggccgccgcaacc 1501
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>gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, complete sequence
          Length = 110184

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    gctccagcttcccctggctc 61
             ||||||||||||||||||||
Sbjct: 55345 gctccagcttcccctggctc 55364
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>gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence
          Length = 184706

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 45    ccagcttcccctggctccgttctc 68
             ||||||||||| ||||||||||||
Sbjct: 61580 ccagcttccccaggctccgttctc 61557
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 293      cccgcgaggccggccgccgc 312
                ||||||||||||||||||||
Sbjct: 18814810 cccgcgaggccggccgccgc 18814829
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>dbj|AK069995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037B09, full
            insert sequence
          Length = 1917

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  cccgcgaggccggccgccgc 312
            ||||||||||||||||||||
Sbjct: 1540 cccgcgaggccggccgccgc 1521
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 293      cccgcgaggccggccgccgc 312
                ||||||||||||||||||||
Sbjct: 18975506 cccgcgaggccggccgccgc 18975525
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>emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on chromosome 11, complete
              sequence
          Length = 136540

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    gctccaggagatcaagcgcc 250
              ||||||||||||||||||||
Sbjct: 119529 gctccaggagatcaagcgcc 119510


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,989,418
Number of Sequences: 3902068
Number of extensions: 2989418
Number of successful extensions: 61867
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61354
Number of HSP's gapped (non-prelim): 509
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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