ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal35m10 |
|---|---|
| Clone Library Name | barley_pub |
>HRG_RABIT (Q28640) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) (Fragment) Length = 526 Score = 41.6 bits (96), Expect = 0.002 Identities = 27/72 (37%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Frame = +2 Query: 419 PHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAP-GLPGQGLHPRHPPHA 595 PH + + R PP G + PPP H H P P G P G PRHPPH Sbjct: 316 PHHRISVNIIHRPPP-----HGHHPHGPPP----HGHHPHGPPPHGHPPHGPPPRHPPHG 366 Query: 596 PDCQGVFHWHPP 631 P H HPP Sbjct: 367 PPP----HGHPP 374 Score = 35.4 bits (80), Expect = 0.15 Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 12/92 (13%) Frame = +2 Query: 413 HPPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLHPR---- 580 H PH P G + PP + P+ PP RHP G P G P Sbjct: 333 HHPHGPPPHGHHPHGPP-----PHGHPPHGPP--------PRHPPHGPPPHGHPPHGPPP 379 Query: 581 --HPPHAPDCQG------VFHWHPPCARGQGF 652 HPPH P G H HPP G GF Sbjct: 380 HGHPPHGPPPHGHPPHGPPPHGHPP--HGHGF 409
>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)| Length = 501 Score = 38.9 bits (89), Expect = 0.014 Identities = 35/113 (30%), Positives = 47/113 (41%), Gaps = 2/113 (1%) Frame = +2 Query: 311 NTSNGEISIDKIQEIGGTRMEAQEVIYDQRSLLVHPPHVPVDDGLYFRRPPLVLAAQGSY 490 + ++ D I++ GG QE+ +R + PP P G RPP+V +G Sbjct: 282 DAETSKLIYDFIEDQGGLEAVRQEM---RRQEPLPPPPPPSRGGNQLPRPPIVGGNKGRS 338 Query: 491 CPYPPP--GLLGHNFHARHPAPGLPGQGLHPRHPPHAPDCQGVFHWHPPCARG 643 P PP G+ R P P PG+G P PP A G PP A G Sbjct: 339 GPLPPVPLGIAPPPPTPRGPPP--PGRGGPPPPPPPATGRSGPLPPPPPGAGG 389
>FOXN1_HUMAN (O15353) Forkhead box protein N1 (Transcription factor winged-helix| nude) Length = 648 Score = 38.1 bits (87), Expect = 0.023 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +2 Query: 458 PPLVLAAQGSYCPYPPPGLLGHNFHARHPAPG-LPGQG-LHPRHPPHAPDCQGVFHWH 625 PP L+ G P PP L H+ HPAPG +PG+ L H P C G + H Sbjct: 400 PPPGLSGSGPIRPLAPPAGLSPPLHSLHPAPGPIPGKNPLQDLLMGHTPSCYGQTYLH 457
>FOXN1_MOUSE (Q61575) Forkhead box protein N1 (Transcription factor winged-helix| nude) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/forkhead homolog 11) (HFH-11) Length = 648 Score = 37.0 bits (84), Expect = 0.051 Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = +2 Query: 458 PPLVLAAQGSYCPYPPPGLLGHNFHARHPAPG-LPGQG-LHPRHPPHAPDCQGVFHWH 625 PP LA G P P L H HPAPG +PG+ L HAP C G + H Sbjct: 400 PPPGLAGPGPIRPMAPSAGLSQPLHPMHPAPGPMPGKNPLQDLLGGHAPSCYGQTYPH 457
>CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity factor 7| Length = 471 Score = 36.6 bits (83), Expect = 0.067 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Frame = +2 Query: 446 YFRRPPLVLAAQG-SYCPYPPPGLLGHNFHARHPAPGLPGQGL---HPRHPPH 592 YF RPP L G P PPP L +F P PG+ Q L PR PPH Sbjct: 224 YFNRPPSALPLMGLPPPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPH 276
>CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity factor 7| (Cleavage and polyadenylation specificity factor 59 kDa subunit) (CPSF 59 kDa subunit) (Pre-mRNA cleavage factor Im 59-kDa subunit) Length = 471 Score = 36.6 bits (83), Expect = 0.067 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Frame = +2 Query: 446 YFRRPPLVLAAQG-SYCPYPPPGLLGHNFHARHPAPGLPGQGL---HPRHPPH 592 YF RPP L G P PPP L +F P PG+ Q L PR PPH Sbjct: 224 YFNRPPSALPLMGLPPPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPH 276
>CPSF7_RAT (Q5XI29) Cleavage and polyadenylation specificity factor 7| Length = 462 Score = 36.6 bits (83), Expect = 0.067 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Frame = +2 Query: 446 YFRRPPLVLAAQG-SYCPYPPPGLLGHNFHARHPAPGLPGQGL---HPRHPPH 592 YF RPP L G P PPP L +F P PG+ Q L PR PPH Sbjct: 215 YFNRPPSALPLMGLPPPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPH 267
>HRG_BOVIN (P33433) Histidine-rich glycoprotein (Histidine-proline-rich| glycoprotein) (HPRG) (Fragments) Length = 396 Score = 35.4 bits (80), Expect = 0.15 Identities = 26/72 (36%), Positives = 29/72 (40%), Gaps = 12/72 (16%) Frame = +2 Query: 455 RPPLVLAAQGSYCPYPPPGLLG------------HNFHARHPAPGLPGQGLHPRHPPHAP 598 R PL G CP+PP G G H+ H HP P G HP H H P Sbjct: 230 RAPLPFPPPGLRCPHPPFGTKGNHRPPHDHSSDEHHPHGHHPHGHHP-HGHHP-HGHHPP 287 Query: 599 DCQGVFHWHPPC 634 D F+ H PC Sbjct: 288 D--NDFYDHGPC 297
>CSPG5_CHICK (Q9DF69) Chondroitin sulfate proteoglycan 5 precursor (Acidic| leucine-rich EGF-like domain-containing brain protein) [Contains: Chondroitin sulfate proteoglycan 5, 38 kDa form; Chondroitin sulfate proteoglycan 5, 80 kDa form] Length = 594 Score = 35.0 bits (79), Expect = 0.20 Identities = 29/116 (25%), Positives = 42/116 (36%) Frame = +2 Query: 254 DTNQDSLIGFVVRDRKSPVNTSNGEISIDKIQEIGGTRMEAQEVIYDQRSLLVHPPHVPV 433 D QD +G P + G +++ +E+G + + L PP +P Sbjct: 86 DAAQDPRLGVT-----GPTDGDGGVVALGSPEEVGSGEQPTRAGVGPTEGLTPRPPGLP- 139 Query: 434 DDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLHPRHPPHAPD 601 GL P L P P GL N +P+ GLP G P P P+ Sbjct: 140 SPGLGLSSPGPNLGLPSLDLPNPNLGLPDPNLGLPNPSLGLPSPGPTPDRPIPNPN 195
>FMN2_MOUSE (Q9JL04) Formin-2| Length = 1567 Score = 33.9 bits (76), Expect = 0.43 Identities = 31/88 (35%), Positives = 33/88 (37%), Gaps = 6/88 (6%) Frame = +2 Query: 404 LLVHPPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLHPRH 583 +L PP P GL PP G P PPP L G P P LPG G+ P Sbjct: 892 MLPAPPQPPPLPGLGVPPPPPAPPLPGMGIP-PPPPLPGMGI---PPPPPLPGMGIPPPP 947 Query: 584 P------PHAPDCQGVFHWHPPCARGQG 649 P P P GV PP G G Sbjct: 948 PLPGVGIPPPPPLPGVGIPPPPPLPGVG 975 Score = 30.0 bits (66), Expect = 6.3 Identities = 30/78 (38%), Positives = 35/78 (44%) Frame = +2 Query: 416 PPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLHPRHPPHA 595 PP +P G+ PP + GS P PPP L G A P P LPG G+ P PP Sbjct: 1023 PPPLP---GMGIPPPPPL---PGSGIP-PPPALPGV---AIPPPPPLPGMGVPPPAPP-- 1070 Query: 596 PDCQGVFHWHPPCARGQG 649 P G+ PP G G Sbjct: 1071 PPGAGI--PPPPLLPGSG 1086
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 33.5 bits (75), Expect = 0.57 Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 7/89 (7%) Frame = +2 Query: 407 LVHP-------PHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQ 565 LVHP P P+ L R L +++G P PPP + A P P L Sbjct: 1342 LVHPLTGKALDPASPLGLALAARERALKESSEGGGTPQPPPRPPSPRYDA--PPPTLHHH 1399 Query: 566 GLHPRHPPHAPDCQGVFHWHPPCARGQGF 652 H H PHA + W P R G+ Sbjct: 1400 SPHSPHSPHARHEPVLRLWGDPARRELGY 1428
>YO02_BPHP1 (P51701) Hypothetical 7.9 kDa protein in int-C1 intergenic region| (ORF2) (ORF16) Length = 68 Score = 33.5 bits (75), Expect = 0.57 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 119 KILKVNKRIGLAKIEDDTCIYVCPGQKEIITVLQKYGFWKG 241 K++K+ +R+ KI D C + I LQKYGFWKG Sbjct: 8 KLIKLYQRLAPQKIRD-ACRFEPTCSNYAILALQKYGFWKG 47
>FOXD4_MOUSE (Q60688) Forkhead box protein D4 (Forkhead-related protein FKHL9)| (Forkhead-related transcription factor 5) (FREAC-5) (Transcription factor FKH-2) Length = 444 Score = 33.1 bits (74), Expect = 0.74 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 14/79 (17%) Frame = +2 Query: 434 DDGLYFRR--------PPLVLAAQGSYCPYPPPGLLGH------NFHARHPAPGLPGQGL 571 D+G + RR PP + +CP+PPP + + R+ AP P Sbjct: 188 DNGSFLRRRKRFKRHHPP---SGGHPHCPFPPPAVPATLHVSQPSLLLRYSAPPQPNLAA 244 Query: 572 HPRHPPHAPDCQGVFHWHP 628 HP PP + C H HP Sbjct: 245 HPAAPPRSHPC-APLHPHP 262
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 32.0 bits (71), Expect = 1.7 Identities = 25/78 (32%), Positives = 32/78 (41%) Frame = +2 Query: 416 PPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLHPRHPPHA 595 PP P+ +G+ P + G+ P PPP L + P P LPG P PP Sbjct: 631 PPPPPLPEGVGIPSPSSLPG--GTAIPPPPP--LPGSARIPPPPPPLPGSAGIPPPPPPL 686 Query: 596 PDCQGVFHWHPPCARGQG 649 P G+ PP G G Sbjct: 687 PGEAGMPPPPPPLPGGPG 704
>SYI_LACAC (Q5FKU5) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 927 Score = 32.0 bits (71), Expect = 1.7 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 3/95 (3%) Frame = +2 Query: 344 IQEIGGTRME---AQEVIYDQRSLLVHPPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGL 514 +Q + G ME A+ +YD+ SL+ HV +DDG LV A G G Sbjct: 284 VQTVKGADMEYMKAKHPLYDKESLVTEGFHVTLDDG-----TGLVHTAPGF-------GA 331 Query: 515 LGHNFHARHPAPGLPGQGLHPRHPPHAPDCQGVFH 619 N ++ P H R+ P+ +G+F+ Sbjct: 332 DDFNVGQKYDLPVFSPVDAHGRYTDEVPELEGMFY 366
>TBX1_MOUSE (P70323) T-box transcription factor TBX1 (T-box protein 1)| (Testis-specific T-box protein) Length = 479 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = +2 Query: 470 LAAQGSYCPYPPPGLLGHNFHAR-HPAPGLPGQGLHPRHPPH 592 L A+ PYP PGL GH +H HP HP H H Sbjct: 412 LGAKSRPAPYPLPGLRGHGYHPHAHP-------HAHPHHHHH 446 Score = 30.4 bits (67), Expect = 4.8 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = +2 Query: 533 ARHPAPGLPGQGLHPRHPPHAPDCQGVFHWHP 628 A +P PGL G G HP PHA H HP Sbjct: 419 APYPLPGLRGHGYHPHAHPHA---HPHHHHHP 447
>METE_NEIMB (Q9JZQ2) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 758 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/88 (26%), Positives = 43/88 (48%) Frame = -3 Query: 461 EDAENISHHLLVHEEDEQAMIVGHISLLVLPYECPQFLVFCQYLSLRCLCLPVIFGPVQQ 282 E+ E + +LVH E E+ +V + L+ + Q+ + Q RC+ P+IFG V + Sbjct: 472 EEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY-GWVQSYGSRCVKPPIIFGDVSR 530 Query: 281 NRLMSLGLYRLLTHLSRNHIFEGLLLSP 198 M++ L++ + +G+L P Sbjct: 531 PEAMTVAWSTYAQSLTKRPM-KGMLTGP 557
>METE_NEIMA (Q9JUT6) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 758 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/88 (26%), Positives = 43/88 (48%) Frame = -3 Query: 461 EDAENISHHLLVHEEDEQAMIVGHISLLVLPYECPQFLVFCQYLSLRCLCLPVIFGPVQQ 282 E+ E + +LVH E E+ +V + L+ + Q+ + Q RC+ P+IFG V + Sbjct: 472 EEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY-GWVQSYGSRCVKPPIIFGDVSR 530 Query: 281 NRLMSLGLYRLLTHLSRNHIFEGLLLSP 198 M++ L++ + +G+L P Sbjct: 531 PEAMTVAWSTYAQSLTKRPM-KGMLTGP 557
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Frame = +2 Query: 449 FRRPPLVLAAQ----GSYCPYPPPGLLGHNFHARHPAPGLPGQGLHPRHPPHAPDCQGVF 616 ++ PPL+ AQ G Y P PPP P P P G+ PR PP P G+ Sbjct: 243 YQPPPLMGMAQSGYQGQYPPVPPP----PPSVTPMPPPMPPTPGMTPRPPP--PPSSGM- 295 Query: 617 HWHPP 631 W PP Sbjct: 296 -WPPP 299 Score = 29.6 bits (65), Expect = 8.2 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 1/80 (1%) Frame = +2 Query: 416 PPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPA-PGLPGQGLHPRHPPH 592 PP +P G+ R PP + P PPPG R P PG+P G+ P PP Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG--------RTPGPPGMP--GMPPPPPPS 323 Query: 593 APDCQGVFHWHPPCARGQGF 652 G+ PP G + Sbjct: 324 RFGPPGMGGMPPPPPPGMRY 343
>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 475 Score = 31.2 bits (69), Expect = 2.8 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Frame = +2 Query: 407 LVHPP----HVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLH 574 +VHPP H P G++ P + A G + P P H P P G+H Sbjct: 304 VVHPPTSGVHPPAP-GVHPPTPGVHPPAPGVHPPAPGVHPPAPGVHPPTPGVHPPAPGVH 362 Query: 575 PRHPPHAPDCQGVFHWHPPCARG 643 P P P GV HPP + G Sbjct: 363 PPAPGVHPPAPGV---HPPPSAG 382 Score = 29.6 bits (65), Expect = 8.2 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Frame = +2 Query: 410 VHPP----HVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQ--GL 571 VHPP H P G++ + P G + P P H PAPG+ Q G+ Sbjct: 368 VHPPAPGVHPPPSAGVHPQAP-------GVHPPAPAVHPQAPGVHP--PAPGIHPQAPGV 418 Query: 572 HPRHPPHAPDCQGVFHWHPP 631 HP+ PP H PP Sbjct: 419 HPQPPPGVHPAAPGVHPQPP 438
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 31.2 bits (69), Expect = 2.8 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +2 Query: 488 YCPYPPPGLLGHNFHARHPAPGLPGQGLHPRHPP 589 + P PPP + HA HP P LP PR P Sbjct: 44 HAPPPPPPPPPPHLHAAHPGPALPEYFPRPRREP 77
>LEG4_PIG (Q29058) Galectin-4 (Lactose-binding lectin 4) (L-36| lactose-binding protein) (L36LBP) Length = 323 Score = 31.2 bits (69), Expect = 2.8 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +2 Query: 494 PYPPPGLLGHNFHARHPAPGLPGQGLHPRHPPHAPDCQGVFHWHPP 631 P P PG + P PG PG G H + P + P +G ++PP Sbjct: 154 PAPSPGPM--------PNPGYPGPGKHNQQPCNLPCMEGAPTFNPP 191
>ACHA2_CHICK (P09480) Neuronal acetylcholine receptor protein, alpha-2 subunit| precursor Length = 528 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 443 LYFRRPPLVLAAQGSYCPYPPPG 511 L+ +RPPL+L A+G+ Y PPG Sbjct: 353 LFMKRPPLLLPAEGTTGQYDPPG 375
>RYR1_HUMAN (P21817) Ryanodine receptor 1 (Skeletal muscle-type ryanodine| receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release channel) Length = 5038 Score = 31.2 bits (69), Expect = 2.8 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +2 Query: 503 PPGLLGHNFHARHPAPGLPGQGLHPR-HPPHAPDCQGVFHWHPPC 634 PPG N H RH GLPG G+ PPH H+ PPC Sbjct: 1748 PPGRSTENGHPRH---GLPGVGVTTSLRPPH--------HFSPPC 1781
>CSKI2_MOUSE (Q8VHK1) Caskin-2| Length = 1201 Score = 30.4 bits (67), Expect = 4.8 Identities = 20/77 (25%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Frame = +2 Query: 20 DLRHSQNRSIM-VISLCLNVESSKDGLEGVKEVAKILKVNKRIGLAKIEDDTCIYVCPGQ 196 ++R++ N++ + +++ ++S++ + ++E + ILKV + D T + V G Sbjct: 248 NIRNTYNQTALDIVNQFTTSQASREIKQLLREASGILKVRALKDFWNLHDPTALNVRAG- 306 Query: 197 KEIITVLQKY--GFWKG 241 ++ITVL+++ G WKG Sbjct: 307 -DVITVLEQHPDGRWKG 322
>MYO7A_HUMAN (Q13402) Myosin-7A (Myosin VIIa)| Length = 2215 Score = 30.4 bits (67), Expect = 4.8 Identities = 16/37 (43%), Positives = 25/37 (67%) Frame = -3 Query: 545 QDAEHGSCDLVVQEEDMDNMSLALPVPEEDAENISHH 435 +D E G ++V EED+D ALP+P+ED E++S + Sbjct: 968 EDLERGRREMV--EEDLD---AALPLPDEDEEDLSEY 999
>MGR1_MOUSE (P97772) Metabotropic glutamate receptor 1 precursor (mGluR1)| Length = 1199 Score = 30.4 bits (67), Expect = 4.8 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 25/86 (29%) Frame = +2 Query: 416 PPHVPVDDGLYFRR--------PPLVLAAQGSYCPYPPP-----------GLLGH----- 523 PPH+ ++ F PP + Q P PPP G++ + Sbjct: 992 PPHLSAEETPLFLADSVIPKGLPPPLPQQQQQPPPQPPPQQPKSLMDQLQGVVTNFGSGI 1051 Query: 524 -NFHARHPAPGLPGQGLHPRHPPHAP 598 +FHA PG PG GL +PP P Sbjct: 1052 PDFHAVLAGPGTPGNGLRSLYPPPPP 1077
>PRA_MYCLE (P41484) Proline-rich antigen (36 kDa antigen)| Length = 249 Score = 30.4 bits (67), Expect = 4.8 Identities = 18/44 (40%), Positives = 20/44 (45%) Frame = +2 Query: 458 PPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLHPRHPP 589 PP GSY P PPPG +P P PG G +P PP Sbjct: 40 PPTAPPVGGSYPPPPPPG-------GSYPPPPPPG-GSYPPPPP 75
>ANX11_BOVIN (P27214) Annexin A11 (Annexin XI) (Calcyclin-associated annexin-50)| (CAP-50) Length = 503 Score = 30.4 bits (67), Expect = 4.8 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Frame = +2 Query: 449 FRRPPLVLAAQGSYCPYPPPG---LLGHNFHARHPAPGLPGQGLHP--RHPPHAPDCQGV 613 F +PP SY YPPPG G + +P +PGQ + P + PP GV Sbjct: 89 FGQPPPAQQPVPSYGMYPPPGGNPTSGMPSYPPYPGAPVPGQPMLPPGQQPP------GV 142 Query: 614 FHWHPP 631 + PP Sbjct: 143 YPGQPP 148
>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) (mDIA1) (p140mDIA) Length = 1255 Score = 30.4 bits (67), Expect = 4.8 Identities = 26/79 (32%), Positives = 30/79 (37%), Gaps = 1/79 (1%) Frame = +2 Query: 416 PPHVPVDDGLYFRRPPLVLAAQGSYCPYPP-PGLLGHNFHARHPAPGLPGQGLHPRHPPH 592 PP P+ PP + G P PP PG +G P P LPG P PP Sbjct: 660 PPPPPLPGATAIPPPPPLPGGTGIPPPPPPLPGSVGVP-----PPPPLPGGPGLPPPPPP 714 Query: 593 APDCQGVFHWHPPCARGQG 649 P G+ PP G G Sbjct: 715 FPGAPGI----PPPPPGMG 729
>CTGE5_MOUSE (Q8R311) Cutaneous T-cell lymphoma-associated antigen 5 homolog| (cTAGE-5 protein) (Meningioma-expressed antigen 6) Length = 779 Score = 30.4 bits (67), Expect = 4.8 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 10/77 (12%) Frame = +2 Query: 416 PPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLL----GHNFHARH----PAPGLPGQGL 571 PP PV D L+ P +G P PPPG + F R P P PG+ + Sbjct: 670 PPFPPVRDPLFPVDPRSQFMRRGPSFPPPPPGSIYAAPRDYFPPRDFPGPPLPPFPGRTV 729 Query: 572 H-PR-HPPHAPDCQGVF 616 + PR PP+ P G F Sbjct: 730 YAPRGFPPYLPPRAGFF 746
>CSKI2_HUMAN (Q8WXE0) Caskin-2| Length = 1202 Score = 30.4 bits (67), Expect = 4.8 Identities = 20/77 (25%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Frame = +2 Query: 20 DLRHSQNRSIM-VISLCLNVESSKDGLEGVKEVAKILKVNKRIGLAKIEDDTCIYVCPGQ 196 ++R++ N++ + +++ ++S++ + ++E + ILKV + D T + V G Sbjct: 248 NIRNTYNQTALDIVNQFTTSQASREIKQLLREASGILKVRALKDFWNLHDPTALNVRAG- 306 Query: 197 KEIITVLQKY--GFWKG 241 ++ITVL+++ G WKG Sbjct: 307 -DVITVLEQHPDGRWKG 322
>METE_CORGL (Q8NRB3) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 745 Score = 30.0 bits (66), Expect = 6.3 Identities = 23/85 (27%), Positives = 43/85 (50%) Frame = -3 Query: 452 ENISHHLLVHEEDEQAMIVGHISLLVLPYECPQFLVFCQYLSLRCLCLPVIFGPVQQNRL 273 E + +LVH E E+ +V + S L+ + + Q RC+ PV+FG V + Sbjct: 460 EELGLDVLVHGEPERNDMVQYFSELLDGF-LSTANGWVQSYGSRCVRPPVLFGNVSRPAP 518 Query: 272 MSLGLYRLLTHLSRNHIFEGLLLSP 198 M++ ++ L++ H+ +G+L P Sbjct: 519 MTVKWFQYAQSLTQKHV-KGMLTGP 542
>PRA_MYCTU (O53426) Proline-rich antigen homolog| Length = 240 Score = 30.0 bits (66), Expect = 6.3 Identities = 21/60 (35%), Positives = 24/60 (40%) Frame = +2 Query: 416 PPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLHPRHPPHA 595 PP P G + PP Y P PPP G + P P PG G +P PP A Sbjct: 14 PPPPPGPSGGH-EPPPAAPPGGSGYAPPPPPSS-GSGY---PPPPPPPGGGAYPPPPPSA 68
>MYO7A_MOUSE (P97479) Myosin-7A (Myosin VIIa)| Length = 2215 Score = 30.0 bits (66), Expect = 6.3 Identities = 16/37 (43%), Positives = 25/37 (67%) Frame = -3 Query: 545 QDAEHGSCDLVVQEEDMDNMSLALPVPEEDAENISHH 435 +D E G ++V EED+D ALP+P+ED E++S + Sbjct: 968 EDLERGRREMV--EEDVD---AALPLPDEDEEDLSEY 999
>CCNK_MOUSE (O88874) Cyclin-K| Length = 554 Score = 30.0 bits (66), Expect = 6.3 Identities = 22/62 (35%), Positives = 28/62 (45%) Frame = +2 Query: 413 HPPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLHPRHPPH 592 +PP P + F PP L + P+PPPGL A +P P +P G P PP Sbjct: 480 YPPPPPTYNP-NFPPPPPRLPPTHAVPPHPPPGL--GLPPASYPPPAVPPGGQPPVPPPI 536 Query: 593 AP 598 P Sbjct: 537 PP 538
>FOR3_SCHPO (O94532) Formin-3| Length = 1461 Score = 30.0 bits (66), Expect = 6.3 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 2/94 (2%) Frame = +2 Query: 371 EAQEVIYDQRSLLVHPPHVPVDDGLYFRRPPLVLAAQGSYCPYP--PPGLLGHNFHARHP 544 + + + +Q+ LL+ P P PP V+ + P P PP + P Sbjct: 716 DVSDTVEEQQKLLLKSPPPP---------PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766 Query: 545 APGLPGQGLHPRHPPHAPDCQGVFHWHPPCARGQ 646 PG+ G G P PP G ++ P + + Sbjct: 767 PPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAE 800
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 30.0 bits (66), Expect = 6.3 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 7/66 (10%) Frame = +2 Query: 419 PHVPVDDGLYFRRP--PLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQ-----GLHP 577 P P + G+ P P + + G P PPG G + APGLPGQ P Sbjct: 1410 PPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGP 1469 Query: 578 RHPPHA 595 R PP A Sbjct: 1470 RGPPGA 1475
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 29.6 bits (65), Expect = 8.2 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +2 Query: 494 PYPPPGLLGHNFHARHPAPGLPGQGLHPRHPPHAPD 601 P PP H+ ++ P+PG+P G P P P+ Sbjct: 480 PAPPAMSPHHSLNSAGPSPGMPNSGPSPLQSPAGPN 515
>GAP2_DROME (Q8T498) Probable Ras GTPase-activating protein| Length = 1556 Score = 29.6 bits (65), Expect = 8.2 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = +2 Query: 512 LLGHNFHARHPAPGLPGQGLHPRHPPHAP 598 L GH HA HP Q LHP H P AP Sbjct: 913 LHGHQQHAHHP------QQLHPHHCPPAP 935
>IF39_HUMAN (P55884) Eukaryotic translation initiation factor 3 subunit 9| (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1) Length = 814 Score = 29.6 bits (65), Expect = 8.2 Identities = 11/40 (27%), Positives = 24/40 (60%) Frame = +2 Query: 254 DTNQDSLIGFVVRDRKSPVNTSNGEISIDKIQEIGGTRME 373 D +++ L+G V++DR + + I +D + ++G R+E Sbjct: 162 DVSEEELLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLE 201
>YKU4_YEAST (P36041) Hypothetical 69.8 kDa protein in LOS1-TOR2 intergenic| region Length = 632 Score = 29.6 bits (65), Expect = 8.2 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 5/121 (4%) Frame = +2 Query: 239 GASTVDTNQDSLIGFVVRDRKSPVNTSNGEISID-----KIQEIGGTRMEAQEVIYDQRS 403 G ST + L+ F R S N + +S K+Q + + + Q++ + Sbjct: 369 GNSTPHQSGSRLMSFFKESRSSTPNAESQLLSASDKDNGKMQTLPQFQQQPQQM--QPMA 426 Query: 404 LLVHPPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLHPRH 583 HPP+ + +F ++ S P PPPGL+ H P P G+ P Sbjct: 427 FTQHPPN----NNAFFNGLLNKGKSETSTPPPPPPGLIAHQ------GPQFPVMGVPPNF 476 Query: 584 P 586 P Sbjct: 477 P 477
>IF39_RAT (Q4G061) Eukaryotic translation initiation factor 3 subunit 9| (eIF-3 eta) Length = 797 Score = 29.6 bits (65), Expect = 8.2 Identities = 11/40 (27%), Positives = 24/40 (60%) Frame = +2 Query: 254 DTNQDSLIGFVVRDRKSPVNTSNGEISIDKIQEIGGTRME 373 D +++ L+G V++DR + + I +D + ++G R+E Sbjct: 145 DVSEEELLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLE 184
>IF39_MOUSE (Q8JZQ9) Eukaryotic translation initiation factor 3 subunit 9| (eIF-3 eta) (eIF3 p116) Length = 803 Score = 29.6 bits (65), Expect = 8.2 Identities = 11/40 (27%), Positives = 24/40 (60%) Frame = +2 Query: 254 DTNQDSLIGFVVRDRKSPVNTSNGEISIDKIQEIGGTRME 373 D +++ L+G V++DR + + I +D + ++G R+E Sbjct: 151 DVSEEELLGDVLKDRPQEADGIDSVIVVDNVPQVGPDRLE 190
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 29.6 bits (65), Expect = 8.2 Identities = 23/65 (35%), Positives = 26/65 (40%) Frame = +2 Query: 395 QRSLLVHPPHVPVDDGLYFRRPPLVLAAQGSYCPYPPPGLLGHNFHARHPAPGLPGQGLH 574 Q L H PH G PP + G P PPPG+ P PG P G+ Sbjct: 308 QMQLAHHGPH---GLGHPHAGPP---GSGGQPPPRPPPGM---------PHPGPPPMGMP 352 Query: 575 PRHPP 589 PR PP Sbjct: 353 PRGPP 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,649,968 Number of Sequences: 219361 Number of extensions: 2209494 Number of successful extensions: 6980 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 6489 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6889 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
