ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal36b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyras... 31 2.6
2AIR12_ARATH (Q94BT2) Auxin-induced in root cultures protein 12 p... 30 4.4

>TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1)|
           (TRF1-interacting ankyrin-related ADP-ribose polymerase)
          Length = 1327

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 452 LVILNATMPYGHATNLAVLCIQGISTVAQSSWNYT 348
           L+ L+    +GHA  +++L  QG    A+ +WNYT
Sbjct: 250 LIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYT 284



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>AIR12_ARATH (Q94BT2) Auxin-induced in root cultures protein 12 precursor|
          Length = 252

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 12/43 (27%), Positives = 26/43 (60%)
 Frame = -2

Query: 470 FDSCTRLVILNATMPYGHATNLAVLCIQGISTVAQSSWNYTQW 342
           FDSC  L +LN+ + Y + ++ + L +  ++T +Q++  +  W
Sbjct: 40  FDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAW 82


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,443,289
Number of Sequences: 219361
Number of extensions: 1293989
Number of successful extensions: 1672
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1672
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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