| Clone Name | baal36b08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 125 bits (63), Expect = 2e-25 Identities = 137/160 (85%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 188 aaactagctccaattagcacctcttgggtgggctagnnnnnnnggatgggttagatgcaa 247 |||||||||||||| |||||||||||| ||||||| || |||||||||||||| Sbjct: 15954232 aaactagctccaataagcacctcttggaggggctagtttttttgg-tgggttagatgcaa 15954290 Query: 248 ctagctccaatctaa-ccctcatgtttgaatactttaggtgctatgtgagccccaactag 306 ||||| ||||||||| |||||||||||| || ||||||| ||||| |||||||||||||| Sbjct: 15954291 ctagccccaatctaacccctcatgtttggatcctttagg-gctatttgagccccaactag 15954349 Query: 307 cttaaactaactctagcctaggaatccaaacagggccatt 346 || |||||||||||| || | ||||||||||||||||| Sbjct: 15954350 ctcaaactaactctaacccttggatccaaacagggccatt 15954389 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 8 ctaaccttaaactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 |||||| | ||||||||||||| |||||||||||||||| |||| ||||||||||||| Sbjct: 15950312 ctaaccctgaactaactctagccctagaggtgtttggatgaaagggctagattgacaata 15950371 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 167 actttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 ||||||| |||||||||| ||| |||||| ||||||||||||||||||||| Sbjct: 5356320 actttttggtgggccccacccaaaatagctcgaattagcacctcttgggtggg 5356268
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 125 bits (63), Expect = 2e-25 Identities = 137/160 (85%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 188 aaactagctccaattagcacctcttgggtgggctagnnnnnnnggatgggttagatgcaa 247 |||||||||||||| |||||||||||| ||||||| || |||||||||||||| Sbjct: 35634 aaactagctccaataagcacctcttggaggggctagtttttttgg-tgggttagatgcaa 35692 Query: 248 ctagctccaatctaa-ccctcatgtttgaatactttaggtgctatgtgagccccaactag 306 ||||| ||||||||| |||||||||||| || ||||||| ||||| |||||||||||||| Sbjct: 35693 ctagccccaatctaacccctcatgtttggatcctttagg-gctatttgagccccaactag 35751 Query: 307 cttaaactaactctagcctaggaatccaaacagggccatt 346 || |||||||||||| || | ||||||||||||||||| Sbjct: 35752 ctcaaactaactctaacccttggatccaaacagggccatt 35791 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 8 ctaaccttaaactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 |||||| | ||||||||||||| |||||||||||||||| |||| ||||||||||||| Sbjct: 31714 ctaaccctgaactaactctagccctagaggtgtttggatgaaagggctagattgacaata 31773
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 121 bits (61), Expect = 3e-24 Identities = 147/174 (84%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 175 gtgggccccataaaaactagctccaattagcacctcttgggtgggctagnnnnnnnggat 234 |||||||||| |||||||||||||| |||||||||||| ||||||| || | Sbjct: 35788359 gtgggccccactcaaactagctccaataagcacctcttggaggggctagtttttttgg-t 35788417 Query: 235 gggttagatgcaactagctccaatctaa-ccctcatgtttgaatactttaggtgctatgt 293 |||||||||||||||||| ||||||||| |||||||||||| || ||||||| ||||| | Sbjct: 35788418 gggttagatgcaactagccccaatctaacccctcatgtttggatcctttagg-gctattt 35788476 Query: 294 gagccccaactagcttaaactaactctagcctaggaatccaaacagggccattg 347 |||||| |||||||| |||||||||||| || | |||||||||||||||||| Sbjct: 35788477 gagccctaactagctcaaactaactctaacccttggatccaaacagggccattg 35788530 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 8 ctaaccttaaactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 |||||| | ||||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct: 35787697 ctaaccctgaactaactctagccctagagatgtttggatggaagggttagattgacaata 35787756 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||| ||||||||||| ||| |||| |||||||||||| |||||||||| Sbjct: 17198858 ttttcagtgggccccacctaaaatagccccaattagcaccccttgggtggg 17198908
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 121 bits (61), Expect = 3e-24 Identities = 147/174 (84%), Gaps = 3/174 (1%) Strand = Plus / Plus Query: 175 gtgggccccataaaaactagctccaattagcacctcttgggtgggctagnnnnnnnggat 234 |||||||||| |||||||||||||| |||||||||||| ||||||| || | Sbjct: 59074 gtgggccccactcaaactagctccaataagcacctcttggaggggctagtttttttgg-t 59132 Query: 235 gggttagatgcaactagctccaatctaa-ccctcatgtttgaatactttaggtgctatgt 293 |||||||||||||||||| ||||||||| |||||||||||| || ||||||| ||||| | Sbjct: 59133 gggttagatgcaactagccccaatctaacccctcatgtttggatcctttagg-gctattt 59191 Query: 294 gagccccaactagcttaaactaactctagcctaggaatccaaacagggccattg 347 |||||| |||||||| |||||||||||| || | |||||||||||||||||| Sbjct: 59192 gagccctaactagctcaaactaactctaacccttggatccaaacagggccattg 59245 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 8 ctaaccttaaactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 |||||| | ||||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct: 58412 ctaaccctgaactaactctagccctagagatgtttggatggaagggttagattgacaata 58471
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 105 bits (53), Expect = 2e-19 Identities = 144/173 (83%), Gaps = 4/173 (2%) Strand = Plus / Plus Query: 174 agtgggccccataaaaactagctccaattagcacctcttgggtgggctagnnnnnnngga 233 ||||||||||| |||||||||||||| |||| ||||||| ||||||| | Sbjct: 6233 agtgggccccactcaaactagctccaataagcatctcttggaggggctagtttttttg-- 6290 Query: 234 tgggttagatgcaactagctccaatctaa-ccctcatgtttgaatactttaggtgctatg 292 |||||||||||| |||||| ||||||||| |||||||||||| || ||||||| ||||| Sbjct: 6291 tgggttagatgcgactagccccaatctaacccctcatgtttggatcctttagg-gctatt 6349 Query: 293 tgagccccaactagcttaaactaactctagcctaggaatccaaacagggccat 345 |||||||||||||||| |||||||||||| || | |||||||||||||||| Sbjct: 6350 tgagccccaactagctcaaactaactctaacccttggatccaaacagggccat 6402 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 8 ctaaccttaaactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 |||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 2118 ctaaccctgaactaactctagccctagaggtgtttggatggaagggttagattgacaata 2177
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 105 bits (53), Expect = 2e-19 Identities = 144/173 (83%), Gaps = 4/173 (2%) Strand = Plus / Plus Query: 174 agtgggccccataaaaactagctccaattagcacctcttgggtgggctagnnnnnnngga 233 ||||||||||| |||||||||||||| |||| ||||||| ||||||| | Sbjct: 24772537 agtgggccccactcaaactagctccaataagcatctcttggaggggctagtttttttg-- 24772594 Query: 234 tgggttagatgcaactagctccaatctaa-ccctcatgtttgaatactttaggtgctatg 292 |||||||||||| |||||| ||||||||| |||||||||||| || ||||||| ||||| Sbjct: 24772595 tgggttagatgcgactagccccaatctaacccctcatgtttggatcctttagg-gctatt 24772653 Query: 293 tgagccccaactagcttaaactaactctagcctaggaatccaaacagggccat 345 |||||||||||||||| |||||||||||| || | |||||||||||||||| Sbjct: 24772654 tgagccccaactagctcaaactaactctaacccttggatccaaacagggccat 24772706 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 8 ctaaccttaaactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 |||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 24768422 ctaaccctgaactaactctagccctagaggtgtttggatggaagggttagattgacaata 24768481 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||||||||||||||| ||| ||||||||||||||| |||||||||||| Sbjct: 25878451 tttttagtgggccccacccaaaatagctccaattagcatctcttgggtggg 25878501 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| ||||||||||||||||||||||| Sbjct: 21284966 tagccccaattagcacctcttgggtggg 21284993 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||| ||||| ||||| |||| |||| |||||||| |||||||||||||| Sbjct: 32772224 ttttcagtggaccccaccaaaaatagccccaattagaacctcttgggtggg 32772174 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||| |||||||||||||| Sbjct: 32665990 tagccccaattagtacctcttgggtggg 32666017 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 aacaaattctgctgctagta 507 |||||||||||||||||||| Sbjct: 24727925 aacaaattctgctgctagta 24727944
>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128559 Score = 105 bits (53), Expect = 2e-19 Identities = 144/173 (83%), Gaps = 4/173 (2%) Strand = Plus / Plus Query: 174 agtgggccccataaaaactagctccaattagcacctcttgggtgggctagnnnnnnngga 233 ||||||||||| |||||||||||||| |||| ||||||| ||||||| | Sbjct: 57949 agtgggccccactcaaactagctccaataagcatctcttggaggggctagtttttttg-- 58006 Query: 234 tgggttagatgcaactagctccaatctaa-ccctcatgtttgaatactttaggtgctatg 292 |||||||||||| |||||| ||||||||| |||||||||||| || ||||||| ||||| Sbjct: 58007 tgggttagatgcgactagccccaatctaacccctcatgtttggatcctttagg-gctatt 58065 Query: 293 tgagccccaactagcttaaactaactctagcctaggaatccaaacagggccat 345 |||||||||||||||| |||||||||||| || | |||||||||||||||| Sbjct: 58066 tgagccccaactagctcaaactaactctaacccttggatccaaacagggccat 58118 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 8 ctaaccttaaactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 |||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 53834 ctaaccctgaactaactctagccctagaggtgtttggatggaagggttagattgacaata 53893
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 105 bits (53), Expect = 2e-19 Identities = 144/173 (83%), Gaps = 4/173 (2%) Strand = Plus / Plus Query: 174 agtgggccccataaaaactagctccaattagcacctcttgggtgggctagnnnnnnngga 233 ||||||||||| |||||||||||||| |||| ||||||| ||||||| | Sbjct: 24862321 agtgggccccactcaaactagctccaataagcatctcttggaggggctagtttttttg-- 24862378 Query: 234 tgggttagatgcaactagctccaatctaa-ccctcatgtttgaatactttaggtgctatg 292 |||||||||||| |||||| ||||||||| |||||||||||| || ||||||| ||||| Sbjct: 24862379 tgggttagatgcgactagccccaatctaacccctcatgtttggatcctttagg-gctatt 24862437 Query: 293 tgagccccaactagcttaaactaactctagcctaggaatccaaacagggccat 345 |||||||||||||||| |||||||||||| || | |||||||||||||||| Sbjct: 24862438 tgagccccaactagctcaaactaactctaacccttggatccaaacagggccat 24862490 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 8 ctaaccttaaactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 |||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 24858206 ctaaccctgaactaactctagccctagaggtgtttggatggaagggttagattgacaata 24858265 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||||||||||||||| ||| ||||||||||||||| |||||||||||| Sbjct: 25969760 tttttagtgggccccacccaaaatagctccaattagcatctcttgggtggg 25969810 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| ||||||||||||||||||||||| Sbjct: 21277995 tagccccaattagcacctcttgggtggg 21278022 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||| ||||| ||||| |||| |||| |||||||| |||||||||||||| Sbjct: 32862734 ttttcagtggaccccaccaaaaatagccccaattagaacctcttgggtggg 32862684 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||| |||||||||||||| Sbjct: 32756500 tagccccaattagtacctcttgggtggg 32756527 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 aacaaattctgctgctagta 507 |||||||||||||||||||| Sbjct: 24644755 aacaaattctgctgctagta 24644774
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 97.6 bits (49), Expect = 4e-17 Identities = 132/158 (83%), Gaps = 3/158 (1%) Strand = Plus / Minus Query: 188 aaactagctccaattagcacctcttgggtgggctagnnnnnnnggatgggttagatgcaa 247 |||||||||||||| |||||||||||| ||||||| | |||||||||||||| Sbjct: 22148376 aaactagctccaataagcacctcttggaggggctagttttttttg-tgggttagatgcaa 22148318 Query: 248 ctagctccaatctaaccc-tcatgtttgaatactttaggtgctatgtgagccccaactag 306 || || |||||||||||| ||||||||| | ||||||| ||||| |||||| ||||||| Sbjct: 22148317 ctggccccaatctaacccctcatgtttgggtcctttagg-gctatttgagcctcaactag 22148259 Query: 307 cttaaactaactctagcctaggaatccaaacagggcca 344 || |||||||||||| || ||||||||||||||||| Sbjct: 22148258 ctcaaactaactctaacccttgaatccaaacagggcca 22148221 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 17 aactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 ||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 22152283 aactaactctagccctagaggtgtttggatggaagggttagattgacaata 22152233 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Minus Query: 170 ttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 ||||||||||| ||| ||| ||||||||||||||||| ||||| |||| Sbjct: 20472689 ttttagtgggctccactcaaaatagctccaattagcaccccttggttggg 20472640
>dbj|AP005658.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0620D11 Length = 140245 Score = 97.6 bits (49), Expect = 4e-17 Identities = 132/158 (83%), Gaps = 3/158 (1%) Strand = Plus / Minus Query: 188 aaactagctccaattagcacctcttgggtgggctagnnnnnnnggatgggttagatgcaa 247 |||||||||||||| |||||||||||| ||||||| | |||||||||||||| Sbjct: 65675 aaactagctccaataagcacctcttggaggggctagttttttttg-tgggttagatgcaa 65617 Query: 248 ctagctccaatctaaccc-tcatgtttgaatactttaggtgctatgtgagccccaactag 306 || || |||||||||||| ||||||||| | ||||||| ||||| |||||| ||||||| Sbjct: 65616 ctggccccaatctaacccctcatgtttgggtcctttagg-gctatttgagcctcaactag 65558 Query: 307 cttaaactaactctagcctaggaatccaaacagggcca 344 || |||||||||||| || ||||||||||||||||| Sbjct: 65557 ctcaaactaactctaacccttgaatccaaacagggcca 65520 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 17 aactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 ||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 69582 aactaactctagccctagaggtgtttggatggaagggttagattgacaata 69532
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 89.7 bits (45), Expect = 9e-15 Identities = 80/89 (89%), Gaps = 2/89 (2%) Strand = Plus / Minus Query: 234 tgggttagatgcaactagctccaatctaac-cctcatgtttgaatactttaggtgctatg 292 ||||||||||||||||||| |||||||||| ||||||||||| || ||||| | ||||| Sbjct: 24923143 tgggttagatgcaactagccccaatctaactcctcatgtttggatcctttaag-gctatt 24923085 Query: 293 tgagccccaactagcttaaactaactcta 321 |||||| ||||||||| |||||||||||| Sbjct: 24923084 tgagcctcaactagctcaaactaactcta 24923056 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 17 aactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 ||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 24923770 aactaactctagccctagaggtgtttggatggaagggttagattgacaata 24923720 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 153 gagagagaacagtgactttttagtgggccccataaaaactagctccaattagcacctctt 212 ||||||||| || || ||||||||||||| | ||| ||||||||||||||||||||| Sbjct: 27758292 gagagagaaaagacaccttttagtgggccctactcaaaatagctccaattagcacctctt 27758233 Query: 213 gggt 216 |||| Sbjct: 27758232 gggt 27758229 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtgg 218 |||||||||||||||| ||| ||||||||||||||||| |||| |||| Sbjct: 8858939 tttttagtgggccccactcaaaatagctccaattagcaccccttgagtgg 8858988 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggt 216 ||||||||||||||||||||||||| Sbjct: 27758194 tagctccaattagcacctcttgggt 27758170 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggt 216 ||||||||||||||||||||||||| Sbjct: 27758135 tagctccaattagcacctcttgggt 27758111 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 ||||||||||||||||||||| |||||| Sbjct: 40042475 tagctccaattagcacctcttaggtggg 40042502 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||||||| |||||||||| Sbjct: 22639442 tagccccaattagcaccccttgggtggg 22639415 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||||||||||| ||| ||||||||||| Sbjct: 7469383 tagctccaattaacacttcttgggtggg 7469356
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0501G01 Length = 154561 Score = 89.7 bits (45), Expect = 9e-15 Identities = 80/89 (89%), Gaps = 2/89 (2%) Strand = Plus / Minus Query: 234 tgggttagatgcaactagctccaatctaac-cctcatgtttgaatactttaggtgctatg 292 ||||||||||||||||||| |||||||||| ||||||||||| || ||||| | ||||| Sbjct: 146263 tgggttagatgcaactagccccaatctaactcctcatgtttggatcctttaag-gctatt 146205 Query: 293 tgagccccaactagcttaaactaactcta 321 |||||| ||||||||| |||||||||||| Sbjct: 146204 tgagcctcaactagctcaaactaactcta 146176 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 17 aactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 ||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 146890 aactaactctagccctagaggtgtttggatggaagggttagattgacaata 146840
>gb|AF509776.1| Hordeum vulgare subsp. vulgare isolate RSB409B Rpg1 region, genomic sequence Length = 5311 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 8 ctaaccttaaactaactctagctaaagaggtgtttggatgatagggttagatt 60 |||||| ||||||||||||| | ||||||||||||||||| ||||||||||| Sbjct: 4926 ctaaccctaaactaactctaaccaaagaggtgtttggatggaagggttagatt 4874
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete sequence Length = 140720 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||||||||||||||| ||| ||||||||||||||| |||||||||||| Sbjct: 129469 tttttagtgggccccacccaaaatagctccaattagcatctcttgggtggg 129419
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 17 aactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 ||||||||||| | ||||||||||||||||| |||||||||||| ||||| Sbjct: 196329 aactaactctaaccaaagaggtgtttggatggaagggttagattgccaata 196279
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 167 actttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 ||||||| |||||||||| ||| |||||| ||||||||||||||||||||| Sbjct: 90684 actttttggtgggccccacccaaaatagctcgaattagcacctcttgggtggg 90632
>gb|AY184953.1| Hordeum vulgare subsp. spontaneum NPGS PI 531957 alcohol dehydrogenase (adh2) gene, partial cds Length = 2337 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 8 ctaaccttaaactaactctagctaaagaggtgtttggatgatagggttagattgacaata 67 |||||| | ||||||||||| | ||| ||||||||||||| |||||||||||| ||||| Sbjct: 933 ctaaccctgaactaactctaaccaaaaaggtgtttggatggaagggttagattgccaata 874
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 153 gagagagaacagtgactttttagtgggccccataaaaactagctccaattagcacctctt 212 ||||||||| || || ||||||||||||| | ||| ||||||||||||||||||||| Sbjct: 50347 gagagagaaaagacaccttttagtgggccctactcaaaatagctccaattagcacctctt 50288 Query: 213 gggt 216 |||| Sbjct: 50287 gggt 50284 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggt 216 ||||||||||||||||||||||||| Sbjct: 50249 tagctccaattagcacctcttgggt 50225 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggt 216 ||||||||||||||||||||||||| Sbjct: 50190 tagctccaattagcacctcttgggt 50166
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 153 gagagagaacagtgactttttagtgggccccataaaaactagctccaattagcacctctt 212 ||||||||| || || ||||||||||||| | ||| ||||||||||||||||||||| Sbjct: 166858 gagagagaaaagacaccttttagtgggccctactcaaaatagctccaattagcacctctt 166799 Query: 213 gggt 216 |||| Sbjct: 166798 gggt 166795 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggt 216 ||||||||||||||||||||||||| Sbjct: 166760 tagctccaattagcacctcttgggt 166736 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggt 216 ||||||||||||||||||||||||| Sbjct: 166701 tagctccaattagcacctcttgggt 166677
>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete sequence Length = 148611 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 153 gagagagaacagtgactttttagtgggccccataaaaactagctccaattagcacctctt 212 ||||||||| || ||||||| ||||||||| ||| ||||||||||||||||| ||| Sbjct: 21303 gagagagaaaagccacttttttttgggccccacccaaaatagctccaattagcacccctt 21362 Query: 213 gggtggg 219 ||||||| Sbjct: 21363 gggtggg 21369
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 153 gagagagaacagtgactttttagtgggccccataaaaactagctccaattagcacctctt 212 ||||||||| || ||||||| ||||||||| ||| ||||||||||||||||| ||| Sbjct: 79604 gagagagaaaagccacttttttttgggccccacccaaaatagctccaattagcacccctt 79663 Query: 213 gggtggg 219 ||||||| Sbjct: 79664 gggtggg 79670
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 153 gagagagaacagtgactttttagtgggccccataaaaactagctccaattagcacctctt 212 ||||||||| || ||||||| ||||||||| ||| ||||||||||||||||| ||| Sbjct: 20086887 gagagagaaaagccacttttttttgggccccacccaaaatagctccaattagcacccctt 20086828 Query: 213 gggtggg 219 ||||||| Sbjct: 20086827 gggtggg 20086821 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||||||| |||||||||| Sbjct: 16692907 tagccccaattagcaccccttgggtggg 16692880
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 153 gagagagaacagtgactttttagtgggccccataaaaactagctccaattagcacctctt 212 ||||||||| || ||||||| ||||||||| ||| ||||||||||||||||| ||| Sbjct: 20098163 gagagagaaaagccacttttttttgggccccacccaaaatagctccaattagcacccctt 20098104 Query: 213 gggtggg 219 ||||||| Sbjct: 20098103 gggtggg 20098097 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||||||| |||||||||| Sbjct: 16701947 tagccccaattagcaccccttgggtggg 16701920
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtg 217 |||||||||||||||||||||||||| Sbjct: 71458 tagctccaattagcacctcttgggtg 71483
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtg 217 |||||||||||||||||||||||||| Sbjct: 20008795 tagctccaattagcacctcttgggtg 20008820 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| ||||||||||||||||||||||| Sbjct: 24639840 tagccccaattagcacctcttgggtggg 24639813 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||||||| |||||||||| Sbjct: 7291167 tagccccaattagcaccccttgggtggg 7291194
>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0469E09 Length = 146081 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtgg 218 |||||||||||||||| ||| ||||||||||||||||| |||| |||| Sbjct: 94967 tttttagtgggccccactcaaaatagctccaattagcaccccttgagtgg 95016
>gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0068E24, complete sequence Length = 141492 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 175 gtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||||||||| ||| ||||||||||||||||| |||||||||| Sbjct: 84023 gtgggccccacccaaaatagctccaattagcaccccttgggtggg 83979
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 175 gtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||||||||| ||| ||||||||||||||||| |||||||||| Sbjct: 22931516 gtgggccccacccaaaatagctccaattagcaccccttgggtggg 22931472 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 attagcacctcttgggtggg 219 |||||||||||||||||||| Sbjct: 5380394 attagcacctcttgggtggg 5380375
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 153 gagagagaacagtgactttttagtgggccccataaaaactagctccaattagcacctctt 212 ||||||||| || |||||| ||||||||||| ||| ||||||||||||||||| || Sbjct: 17856585 gagagagaaaagacacttttcagtgggccccactcaaaatagctccaattagcacccttt 17856644 Query: 213 gggtg 217 ||||| Sbjct: 17856645 gggtg 17856649 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| ||||||||||||||||||||||| Sbjct: 8569060 tagccccaattagcacctcttgggtggg 8569087 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||||||| |||||||||| Sbjct: 8152894 tagccccaattagcaccccttgggtggg 8152921
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 153 gagagagaacagtgactttttagtgggccccataaaaactagctccaattagcacctctt 212 ||||||||| || |||||| ||||||||||| ||| ||||||||||||||||| || Sbjct: 97229 gagagagaaaagacacttttcagtgggccccactcaaaatagctccaattagcacccttt 97288 Query: 213 gggtg 217 ||||| Sbjct: 97289 gggtg 97293
>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_B06 Length = 106678 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 153 gagagagaacagtgactttttagtgggccccataaaaactagctccaattagcacctctt 212 ||||||||| || |||||| ||||||||||| ||| ||||||||||||||||| || Sbjct: 7404 gagagagaaaagacacttttcagtgggccccactcaaaatagctccaattagcacccttt 7463 Query: 213 gggtg 217 ||||| Sbjct: 7464 gggtg 7468
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 175 gtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||||||||| ||| ||||||||||||||||| |||||||||| Sbjct: 23241426 gtgggccccacccaaaatagctccaattagcaccccttgggtggg 23241382 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 attagcacctcttgggtggg 219 |||||||||||||||||||| Sbjct: 5446871 attagcacctcttgggtggg 5446852
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| ||||||||||||||||||||||| Sbjct: 140881 tagccccaattagcacctcttgggtggg 140908
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413C03 Length = 162161 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 ||||||||||||||||||||| |||||| Sbjct: 133926 tagctccaattagcacctcttaggtggg 133953
>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12 Length = 139796 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| ||||||||||||||||||||||| Sbjct: 90270 tagccccaattagcacctcttgggtggg 90297
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| ||||||||||||||||||||||| Sbjct: 29363 tagccccaattagcacctcttgggtggg 29336
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||| |||||||||||| ||| |||| |||||||||||| |||| ||||| Sbjct: 122493 ttttcagtgggccccatccaaaatagccccaattagcaccccttgagtggg 122543
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||| ||||| ||||| |||| |||| |||||||| |||||||||||||| Sbjct: 107317 ttttcagtggaccccaccaaaaatagccccaattagaacctcttgggtggg 107367
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtgg 218 |||| |||||||||||||||||||||| Sbjct: 61124 tagccccaattagcacctcttgggtgg 61150
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||| |||||||||||| ||| |||| |||||||||||| |||| ||||| Sbjct: 12271338 ttttcagtgggccccatccaaaatagccccaattagcaccccttgagtggg 12271288 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 167 actttttagtgggccccataaaaactagctccaattagcacctcttg 213 |||||||||| ||||||| ||| |||| ||||||||||||||||| Sbjct: 9621408 actttttagtaggccccagccaaaatagccccaattagcacctcttg 9621454 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 169 tttttagtgggccccataaaaactagctccaattagcacc 208 |||||||||||||||| || ||||||||||||||||| Sbjct: 23959847 tttttagtgggccccacctgaaatagctccaattagcacc 23959886
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtgg 218 |||| |||||||||||||||||||||| Sbjct: 24874239 tagccccaattagcacctcttgggtgg 24874265
>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0063H21 Length = 188058 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||| |||||||||||| ||| |||| |||||||||||| |||| ||||| Sbjct: 144830 ttttcagtgggccccatccaaaatagccccaattagcaccccttgagtggg 144780
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||| |||||||||||| ||| |||| |||||||||||| |||| ||||| Sbjct: 29987 ttttcagtgggccccatccaaaatagccccaattagcaccccttgagtggg 29937
>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0048K16 Length = 159891 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 169 tttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 |||| ||||||||||| ||| |||| |||||||||||| |||||||||| Sbjct: 69625 ttttcagtgggccccacctaaaatagccccaattagcaccccttgggtggg 69675
>dbj|AP005123.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1015H11 Length = 156897 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 167 actttttagtgggccccataaaaactagctccaattagcacctcttg 213 |||||||||| ||||||| ||| |||| ||||||||||||||||| Sbjct: 18888 actttttagtaggccccagccaaaatagccccaattagcacctcttg 18934
>dbj|AP005157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0005L24 Length = 155365 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 167 actttttagtgggccccataaaaactagctccaattagcacctcttg 213 |||||||||| ||||||| ||| |||| ||||||||||||||||| Sbjct: 151438 actttttagtaggccccagccaaaatagccccaattagcacctcttg 151484
>gb|AC020549.4|AC020549 Homo sapiens BAC clone RP11-172C16 from 11, complete sequence Length = 146841 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 taacacctattacctggtggat 151 |||||||||||||||||||||| Sbjct: 101832 taacacctattacctggtggat 101853 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 taacacctattacctggtgg 149 |||||||||||||||||||| Sbjct: 101738 taacacctattacctggtgg 101757
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Minus Query: 170 ttttagtgggccccataaaaactagctccaattagcacctcttgggtggg 219 ||||||||||| ||| ||| ||||||||||||||||| ||||| |||| Sbjct: 44984 ttttagtgggctccactcaaaatagctccaattagcaccccttggttggg 44935
>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster Length = 162249 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 301 aactagcttaaactaactctagcctaggaatccaaacagggccat 345 |||||||| ||||| |||||||| || |||||||||||||||| Sbjct: 1321 aactagctccaactagctctagccatgggatccaaacagggccat 1365
>emb|AL157897.8| Human DNA sequence from clone RP11-8D22 on chromosome 10, complete sequence Length = 173310 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 agagagtaaaatgatttttta 102 ||||||||||||||||||||| Sbjct: 160147 agagagtaaaatgatttttta 160167
>gb|AC009139.8| Homo sapiens chromosome 16 clone RP11-538I12, complete sequence Length = 178058 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 146 gtggatagagagagaacagtgacttttta 174 ||||| |||||||||||| |||||||||| Sbjct: 104902 gtggacagagagagaacaatgacttttta 104930
>gb|AC023492.5| Homo sapiens BAC clone RP11-24M5 from 4, complete sequence Length = 107458 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 attagacaagaaaaaggaatgtaaa 546 |||||||||||||||| |||||||| Sbjct: 29409 attagacaagaaaaagaaatgtaaa 29385
>gb|AC010548.10| Homo sapiens chromosome 16 clone RP11-518I8, complete sequence Length = 206466 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 146 gtggatagagagagaacagtgacttttta 174 ||||| |||||||||||| |||||||||| Sbjct: 182801 gtggacagagagagaacaatgacttttta 182773
>gb|AF172282.1| Oryza sativa adh1-adh2 region Length = 339485 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 attagcacctcttgggtggg 219 |||||||||||||||||||| Sbjct: 295189 attagcacctcttgggtggg 295208
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 aacaaattctgctgctagta 507 |||||||||||||||||||| Sbjct: 103472 aacaaattctgctgctagta 103491
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||| |||||||||||||| Sbjct: 77917 tagccccaattagtacctcttgggtggg 77890
>gb|AC111113.17| Mus musculus chromosome 1, clone RP23-205B8, complete sequence Length = 201485 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 agagagaacagtgacttttt 173 |||||||||||||||||||| Sbjct: 41518 agagagaacagtgacttttt 41499
>gb|AC123523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051P13, complete sequence Length = 142241 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 attagcacctcttgggtggg 219 |||||||||||||||||||| Sbjct: 40935 attagcacctcttgggtggg 40916
>gb|AY552098.1| Homo sapiens phospholipase A2, group IVA (cytosolic, calcium-dependent) (PLA2G4A) gene, complete cds Length = 163504 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 atggagagagtaaaatgatt 97 |||||||||||||||||||| Sbjct: 125295 atggagagagtaaaatgatt 125276
>gb|AC003087.2| Homo sapiens BAC clone CTB-119H12 from 7, complete sequence Length = 103566 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 attagacaagaaaaaggaat 541 |||||||||||||||||||| Sbjct: 54046 attagacaagaaaaaggaat 54065
>gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, complete sequence Length = 183991 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gtgcccatatggcatagtgg 436 |||||||||||||||||||| Sbjct: 115900 gtgcccatatggcatagtgg 115881
>emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G19 on chromosome 6q14.1-14.3 Contains the 3' part of a novel gene, complete sequence Length = 88509 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 attagacaagaaaaaggaat 541 |||||||||||||||||||| Sbjct: 49983 attagacaagaaaaaggaat 50002
>emb|AL049797.8|HSJ661G12 Human DNA sequence from clone RP4-661G12 on chromosome 1q25.3-31.2 Contains the 3' end of the PLA2G4A gene for phospholipase A2 group IVA (cytosolic, calcium dependent), complete sequence Length = 143453 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 atggagagagtaaaatgatt 97 |||||||||||||||||||| Sbjct: 23324 atggagagagtaaaatgatt 23305
>emb|AL663001.3|OSJN00197 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022P19, complete sequence Length = 135836 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||||||| |||||||||| Sbjct: 18537 tagccccaattagcaccccttgggtggg 18564
>gb|AC122153.4| Oryctolagus cuniculus clone LB1-9L8, complete sequence Length = 216345 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 attagacaagaaaaaggaat 541 |||||||||||||||||||| Sbjct: 147062 attagacaagaaaaaggaat 147043
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||||||| |||||||||| Sbjct: 37424 tagccccaattagcaccccttgggtggg 37397
>emb|AL596183.11| Mouse DNA sequence from clone RP23-286B12 on chromosome 11, complete sequence Length = 167058 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 12 ccttaaactaactctagctaaaga 35 |||| ||||||||||||||||||| Sbjct: 56460 ccttgaactaactctagctaaaga 56483
>gb|AC010433.9| Homo sapiens chromosome 5 clone CTD-2202L20, complete sequence Length = 258929 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 agagagaacagtgacttttt 173 |||||||||||||||||||| Sbjct: 183345 agagagaacagtgacttttt 183364
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 aacaaattctgctgctagta 507 |||||||||||||||||||| Sbjct: 23444 aacaaattctgctgctagta 23463
>gb|AC021723.11| Homo sapiens chromosome 11, clone RP11-313M3, complete sequence Length = 166447 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 attagacaagaaaaaggaat 541 |||||||||||||||||||| Sbjct: 36313 attagacaagaaaaaggaat 36332
>emb|BX510926.6| Zebrafish DNA sequence from clone DKEY-72A22 in linkage group 3, complete sequence Length = 32414 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 gagagtaaaatgatttttta 102 |||||||||||||||||||| Sbjct: 31576 gagagtaaaatgatttttta 31595
>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold Length = 1889755 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 attagacaagaaaaaggaat 541 |||||||||||||||||||| Sbjct: 388078 attagacaagaaaaaggaat 388059
>gb|AC073896.41| Homo sapiens 12 BAC RP11-977G19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174487 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 agaacagtgactttttagtg 177 |||||||||||||||||||| Sbjct: 167722 agaacagtgactttttagtg 167741
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||||||||||| ||| ||||||||||| Sbjct: 130411 tagctccaattaacacttcttgggtggg 130384
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||||||||||| ||| ||||||||||| Sbjct: 18175 tagctccaattaacacttcttgggtggg 18148
>gb|AC171009.3| Gallus gallus BAC clone CH261-146H18 from chromosome ul, complete sequence Length = 197416 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gagagagtaaaatgattttt 100 |||||||||||||||||||| Sbjct: 97218 gagagagtaaaatgattttt 97237
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||||||| |||||||||| Sbjct: 16154 tagccccaattagcaccccttgggtggg 16127
>dbj|AP005687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0019B22 Length = 137457 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||||||| |||||||||| Sbjct: 76319 tagccccaattagcaccccttgggtggg 76346
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 169 tttttagtgggccccataaaaactagctccaattagcacc 208 |||||||||||||||| || ||||||||||||||||| Sbjct: 92998 tttttagtgggccccacctgaaatagctccaattagcacc 93037
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete sequence Length = 97077 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tagctccaattagcacctcttgggtggg 219 |||| |||||||||||||||| |||||| Sbjct: 78836 tagccccaattagcacctctttggtggg 78809
>gb|AC171061.3| Gallus gallus BAC clone TAM32-9O12 from chromosome ul, complete sequence Length = 131280 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gagagagtaaaatgattttt 100 |||||||||||||||||||| Sbjct: 114606 gagagagtaaaatgattttt 114625
>dbj|AP003083.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-179B7, complete sequence Length = 161488 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 attagacaagaaaaaggaat 541 |||||||||||||||||||| Sbjct: 55088 attagacaagaaaaaggaat 55107
>emb|BX294380.7| Zebrafish DNA sequence from clone DKEY-58N10 in linkage group 3, complete sequence Length = 212685 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 gagagtaaaatgatttttta 102 |||||||||||||||||||| Sbjct: 1162 gagagtaaaatgatttttta 1181
>gb|AC113982.8| Mus musculus chromosome 1, clone RP24-78E16, complete sequence Length = 206640 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 agagagaacagtgacttttt 173 |||||||||||||||||||| Sbjct: 203358 agagagaacagtgacttttt 203339
>emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chromosome 2, complete sequence Length = 182529 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 aacagggccattgagtgtagttcc 358 ||||||||| |||||||||||||| Sbjct: 38661 aacagggcccttgagtgtagttcc 38638
>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete sequence Length = 175784 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 agtaaaatgattttttagtg 105 |||||||||||||||||||| Sbjct: 41551 agtaaaatgattttttagtg 41570 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,792,798 Number of Sequences: 3902068 Number of extensions: 4792798 Number of successful extensions: 108489 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 107094 Number of HSP's gapped (non-prelim): 1368 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)