ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal35m08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence Length = 1486 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaatcggcacgagg 36 |||||||||||||||||||||||||||||||||||| Sbjct: 461 attcggcacgaggcctcgtgccgaatcggcacgagg 496 Score = 63.9 bits (32), Expect = 5e-07 Identities = 39/40 (97%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgagggct 39 ||||||||||||||||||||||||| |||||||||||||| Sbjct: 486 attcggcacgaggcctcgtgccgaattcggcacgagggct 447 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 gcctcgtgccgaatcggcacgagg 36 |||||||||||| ||||||||||| Sbjct: 497 gcctcgtgccgattcggcacgagg 474
>gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subunit c isoform mRNA, partial cds Length = 911 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 4 cggcacgaggcctcgtgccgaatcggcacgaggg 37 |||||||||||||||||||||||||||||||||| Sbjct: 1 cggcacgaggcctcgtgccgaatcggcacgaggg 34 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccg 23 ||||||||||||||||||||||| Sbjct: 23 attcggcacgaggcctcgtgccg 1
>gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, complete cds Length = 568 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 4 cggcacgaggcctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||||||||||||| Sbjct: 74 cggcacgaggcctcgtgccgaatcggcacgagg 106 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccg 23 ||||||||||||||||||||||| Sbjct: 96 attcggcacgaggcctcgtgccg 74
>gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence Length = 780 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaatcggcacgaggg 37 |||||||||||||||||||||||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaatcggcacgaggg 32 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 21 attcggcacgaggcctcgtgc 1
>emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial atp3 gene for ATP synthase gamma chain, mitochondrial precursor Length = 1225 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaatcggcacgagg 36 |||||||||||||||||||||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaatcggcacgagg 32 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>gb|BT016708.1| Zea mays clone Contig541 mRNA sequence Length = 1331 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||||||||||| Sbjct: 2 gcacgaggcctcgtgccgaatcggcacgagg 32 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgc 2 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 gcctcgtgccgaatcggcacgagg 36 |||||||||||| ||||||||||| Sbjct: 33 gcctcgtgccgattcggcacgagg 10
>dbj|AB229209.1| Aspergillus oryzae cDNA, contig sequence: AoEST6088 Length = 688 Score = 61.9 bits (31), Expect = 2e-06 Identities = 38/39 (97%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgagggc 38 ||||||||||||||||||||||||| ||||||||||||| Sbjct: 3 attcggcacgaggcctcgtgccgaattcggcacgagggc 41 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccgaat 26 |||||||||||||||||||||||||| Sbjct: 28 attcggcacgaggcctcgtgccgaat 3
>gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiquinone oxidoreductase 10 kDa subunit precursor mRNA, complete cds; nuclear gene for mitochondrial product Length = 868 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 7 cacgaggcctcgtgccgaatcggcacgagg 36 |||||||||||||||||||||||||||||| Sbjct: 1 cacgaggcctcgtgccgaatcggcacgagg 30 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 gcctcgtgccgaatcggcacgagg 36 |||||||||||| ||||||||||| Sbjct: 31 gcctcgtgccgattcggcacgagg 8 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtg 20 |||||||||||||||||||| Sbjct: 20 attcggcacgaggcctcgtg 1
>dbj|AB226176.1| Aspergillus oryzae cDNA, contig sequence: AoEST3034 Length = 651 Score = 60.0 bits (30), Expect = 7e-06 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgaggg 37 ||||||||||||||||||||||||| |||||||||||| Sbjct: 77 attcggcacgaggcctcgtgccgaattcggcacgaggg 114 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccgaat 26 |||||||||||||||||||||||||| Sbjct: 102 attcggcacgaggcctcgtgccgaat 77
>dbj|AB094480.1| Mus musculus LE51 mRNA for hypothetical protein, complete cds Length = 1048 Score = 60.0 bits (30), Expect = 7e-06 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgaggg 37 ||||||||||||||||||||||||| |||||||||||| Sbjct: 433 attcggcacgaggcctcgtgccgaattcggcacgaggg 470 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||||||| ||||||||||| Sbjct: 458 attcggcacgaggcctcgtgccgaattcggcacgagg 422
>ref|NM_026928.1| Mus musculus RIKEN cDNA 1810014F10 gene (1810014F10Rik), mRNA Length = 1048 Score = 60.0 bits (30), Expect = 7e-06 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgaggg 37 ||||||||||||||||||||||||| |||||||||||| Sbjct: 433 attcggcacgaggcctcgtgccgaattcggcacgaggg 470 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||||||| ||||||||||| Sbjct: 458 attcggcacgaggcctcgtgccgaattcggcacgagg 422
>gb|AF499715.1| Thellungiella halophila lipid transfer protein 4-like protein mRNA, complete cds Length = 667 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||||||| ||||||||||| Sbjct: 2 attcggcacgaggcctcgtgccgaattcggcacgagg 38 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccgaat 26 |||||||||||||||||||||||||| Sbjct: 27 attcggcacgaggcctcgtgccgaat 2
>gb|DQ118594.1| Karlodinium micrum chloroplast psaE mRNA, complete cds; nuclear gene for chloroplast product Length = 1328 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||||||| ||||||||||| Sbjct: 693 attcggcacgaggcctcgtgccgaattcggcacgagg 729 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||||||| ||||||||||| Sbjct: 718 attcggcacgaggcctcgtgccgaattcggcacgagg 682
>dbj|AB178055.1| Rana japonica GTH alpha mRNA for gonadotropin alpha-subunit, complete cds Length = 689 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||||||| ||||||||||| Sbjct: 2 attcggcacgaggcctcgtgccgaattcggcacgagg 38 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccgaat 26 |||||||||||||||||||||||||| Sbjct: 27 attcggcacgaggcctcgtgccgaat 2
>gb|AF332963.1| Polytomella sp. Pringsheim 198.80 ferrochelatase mRNA, complete cds Length = 2227 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||||||| ||||||||||| Sbjct: 110 attcggcacgaggcctcgtgccgaattcggcacgagg 146 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||||||| ||||||||||| Sbjct: 135 attcggcacgaggcctcgtgccgaattcggcacgagg 99
>gb|BT016336.1| Zea mays clone Contig169 mRNA sequence Length = 576 Score = 56.0 bits (28), Expect = 1e-04 Identities = 35/36 (97%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 2 ttcggcacgaggcctcgtgccgaa-tcggcacgagg 36 |||||||||||||||||||||||| ||||||||||| Sbjct: 576 ttcggcacgaggcctcgtgccgaattcggcacgagg 541 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaa 25 ||||||||||||||||||||||||| Sbjct: 552 attcggcacgaggcctcgtgccgaa 576
>dbj|AB189027.1| Plutella xylostella mRNA for receptor for activated protein kinase C homolog, complete cds Length = 1132 Score = 54.0 bits (27), Expect = 5e-04 Identities = 34/35 (97%), Gaps = 1/35 (2%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagggc 38 ||||||||||||||||||||| ||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagggc 35 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>gb|AY684302.1| Sparus aurata slow troponin T 2 (sTnT2) mRNA, complete cds Length = 1020 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgaggg 37 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>emb|AJ416378.1|PSP416378 Polytomella sp. 'Pringsheim 198.80' mRNA for mitochondrial cytochrome c (cyc gene) Length = 643 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgaggg 37 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>emb|AJ421017.1|GHI421017 Gossypium hirsutum mRNA for ADP-ribosylation factor (ARF1 gene) Length = 828 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgaggg 37 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>gb|DQ118596.1| Karlodinium micrum isolate 3817 chloroplast glyceraldehyde-3-phosphate dehydrogenase mRNA, partial cds; nuclear gene for chloroplast product Length = 1358 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 4 cggcacgaggcctcgtgccgaa-tcggcacgagg 36 |||||||||||||||||||||| ||||||||||| Sbjct: 1 cggcacgaggcctcgtgccgaattcggcacgagg 34 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgccg 23 ||||||||||||||||||||||| Sbjct: 23 attcggcacgaggcctcgtgccg 1
>gb|AY093683.1| Suaeda maritima subsp. salsa mitogen-activated protein kinase kinase mRNA, complete cds Length = 1952 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgaggg 37 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>gb|AY963297.1| Trichomonas vaginalis putative TBP-associated protein mRNA, complete cds Length = 1410 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgaggg 37 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>dbj|AB180424.1| Plutella xylostella mRNA for Ribosomal protein L21, complete cds Length = 549 Score = 52.0 bits (26), Expect = 0.002 Identities = 33/34 (97%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgaggg 37 ||||||||||||||||||||| |||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgaggg 34 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>gb|DQ187323.1| Capsaspora owczarzaki Shwachman-Bodian-Diamond protein-like protein mRNA, partial cds Length = 694 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>gb|AY639596.1| Salicornia herbacea tonoplast intrinsic protein gamma mRNA, complete cds Length = 1108 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>gb|AY157614.1| Ficus carica chitinase mRNA, complete cds Length = 1309 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>emb|AJ558193.2|PSP558193 Polytomella sp. Pringsheim 198.80 mitochondrial partial mRNA for ATP synthase associated protein MAAP67 (atpR gene) Length = 2203 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>dbj|AB230292.1| Aspergillus oryzae cDNA, contig sequence: AoEST7181 Length = 287 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>dbj|AB077106.1| Prunus persica mRNA, microsatellite marker M1a Length = 605 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>gb|AY057456.1| Stizostedion vitreum clone C1-3 major histocompatibility class I receptor mRNA, complete cds Length = 1293 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 13 gcctcgtgccgaatcggcacgaggg 37 ||||||||||||||||||||||||| Sbjct: 1088 gcctcgtgccgaatcggcacgaggg 1112
>gb|AF466768.1| Mus musculus monoclonal antibody BBK-1 light chain mRNA, complete cds Length = 993 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>gb|AY850179.1| Amborella trichopoda AGL2 mRNA, complete cds Length = 1107 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaa-tcggcacgaggg 37 |||||||||||||||||||| |||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgaggg 33 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 21 attcggcacgaggcctcgtgc 1
>dbj|AB180672.1| Plutella xylostella mRNA for ribosomal protein S23, complete cds Length = 615 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>dbj|AB180671.1| Plutella xylostella mRNA for ribosomal protein S9, complete cds Length = 709 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>dbj|AB180450.1| Plutella xylostella mRNA for cellular retinoic acid binding protein, complete cds Length = 806 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>dbj|AB180430.1| Plutella xylostella mRNA for Ribosomal protein L37A, complete cds Length = 353 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>dbj|AB180425.1| Plutella xylostella mRNA for Ribosomal protein S28, complete cds Length = 437 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1
>dbj|AB180417.1| Plutella xylostella mRNA for Ribosomal protein S29, complete cds Length = 472 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaattcggcacgagg 33 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 22 attcggcacgaggcctcgtgcc 1 Score = 42.1 bits (21), Expect = 1.7 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 13 gcctcgtgccgaat-cggcacgagggctt 40 |||||||||||||| |||||||||||||| Sbjct: 344 gcctcgtgccgaattcggcacgagggctt 316
>gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA clone IMAGE:3940750), complete cds Length = 847 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 12 ggcctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||||| Sbjct: 25 ggcctcgtgccgaatcggcacgagg 1
>gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA sequence Length = 1502 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 12 ggcctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||||| Sbjct: 1422 ggcctcgtgccgaatcggcacgagg 1398
>emb|AJ421970.1|VVU421970 Vulpes vulpes mRNA for sperm protein 8 (SP8) Length = 879 Score = 50.1 bits (25), Expect = 0.007 Identities = 32/33 (96%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaa-tcggcacgaggg 37 |||||||||||||||||||| |||||||||||| Sbjct: 6 gcacgaggcctcgtgccgaattcggcacgaggg 38 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 26 attcggcacgaggcctcgtgc 6
>ref|NM_001010842.1| Gallus gallus heat shock protein 25 (HSP25), mRNA Length = 918 Score = 48.1 bits (24), Expect = 0.028 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaa-tcggcacgagg 36 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 21 attcggcacgaggcctcgtgc 1
>gb|AY135220.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc2) mRNA, complete cds Length = 840 Score = 48.1 bits (24), Expect = 0.028 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaa-tcggcacgagg 36 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 21 attcggcacgaggcctcgtgc 1
>gb|AY135219.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc1) mRNA, complete cds Length = 654 Score = 48.1 bits (24), Expect = 0.028 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaa-tcggcacgagg 36 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 21 attcggcacgaggcctcgtgc 1
>gb|AF526250.1| Chlamys farreri clone iolscfcl363ct379cn399 ribosomal protein S20 mRNA, complete cds Length = 536 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 14 cctcgtgccgaatcggcacgaggg 37 |||||||||||||||||||||||| Sbjct: 76 cctcgtgccgaatcggcacgaggg 53
>gb|AY122071.1| Drosophila melanogaster AT15262 full insert cDNA Length = 1224 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 13 gcctcgtgccgaatcggcacgagg 36 |||||||||||||||||||||||| Sbjct: 24 gcctcgtgccgaatcggcacgagg 1
>dbj|AB228520.1| Aspergillus oryzae cDNA, contig sequence: AoEST5393 Length = 731 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 14 cctcgtgccgaatcggcacgaggg 37 |||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgaggg 24
>gb|AF397911.1|AF397911 Mus musculus clone IMAGE:583715 mRNA sequence Length = 1108 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 3 tcggcacgaggcctcgtgccgaat 26 |||||||||||||||||||||||| Sbjct: 24 tcggcacgaggcctcgtgccgaat 1 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccga 24 |||||||||||||||||||||||| Sbjct: 1 attcggcacgaggcctcgtgccga 24
>dbj|AB154518.1| Gallus gallus Hsp25 mRNA for heat shock protein 25, complete cds Length = 918 Score = 48.1 bits (24), Expect = 0.028 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaa-tcggcacgagg 36 |||||||||||||||||||| ||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaattcggcacgagg 32 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 21 attcggcacgaggcctcgtgc 1
>gb|AF130979.1|AF130979 Homo sapiens SH3 domain-containing protein 6511 mRNA, complete cds Length = 1907 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/35 (94%), Gaps = 2/35 (5%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccgaatcggcacgag 35 |||||||||||| ||||||||||||||||||||| Sbjct: 3 attcggcacgag--ctcgtgccgaatcggcacgag 35
>gb|BC030047.1| Mus musculus cDNA clone IMAGE:1179272, with apparent retained intron Length = 994 Score = 48.1 bits (24), Expect = 0.028 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 6 gcacgaggcctcgtgccgaa-tcggcacgagg 36 |||||||||||||||||||| ||||||||||| Sbjct: 840 gcacgaggcctcgtgccgaattcggcacgagg 809 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 820 attcggcacgaggcctcgtgc 840
>gb|AY109370.1| Zea mays CL2029_4 mRNA sequence Length = 1051 Score = 48.1 bits (24), Expect = 0.028 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 8 acgaggcctcgtgccgaa-tcggcacgagggc 38 |||||||||||||||||| ||||||||||||| Sbjct: 790 acgaggcctcgtgccgaattcggcacgagggc 821
>gb|AY850324.1| Magnaporthe grisea histone H4-like protein mRNA, complete cds Length = 863 Score = 48.1 bits (24), Expect = 0.028 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaa-tcggcacgagg 36 |||||||||||||||||||| ||||||||||| Sbjct: 23 gcacgaggcctcgtgccgaattcggcacgagg 54 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 43 attcggcacgaggcctcgtgc 23
>gb|AY551094.1| Crassostrea gigas cavortin mRNA, complete cds Length = 778 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgaatcggcacgagg 1
>gb|BT018602.1| Zea mays clone EL01N0449E02.d mRNA sequence Length = 1546 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 cctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||| Sbjct: 1116 cctcgtgccgaatcggcacgagg 1138 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cctcgtgccgaatcggcacgagggc 38 ||||||||||| ||||||||||||| Sbjct: 1138 cctcgtgccgattcggcacgagggc 1114
>gb|AY857765.1| Triticum monococcum glyceraldehyde-3-phosphate dehydrogenase (GPD1) mRNA, partial cds Length = 630 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 cctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 gcctcgtgccgaatcggcacgagg 36 |||||||||||| ||||||||||| Sbjct: 24 gcctcgtgccgattcggcacgagg 1
>gb|BT015300.1| Drosophila melanogaster AT22779 full insert cDNA Length = 1541 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 cctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 gcctcgtgccgaatcggcacgagg 36 |||||||||||| ||||||||||| Sbjct: 24 gcctcgtgccgattcggcacgagg 1
>gb|AY223112.1| Schistosoma japonicum clone ZZD1382 mRNA sequence Length = 1276 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||| Sbjct: 23 cctcgtgccgaatcggcacgagg 1 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 cctcgtgccgaatcggcacgaggg 37 ||||||||||| |||||||||||| Sbjct: 1 cctcgtgccgattcggcacgaggg 24
>gb|AY222865.1| Schistosoma japonicum clone ZZD1198 mRNA sequence Length = 711 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 cctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 gcctcgtgccgaatcggcacgagg 36 |||||||||||| ||||||||||| Sbjct: 24 gcctcgtgccgattcggcacgagg 1
>gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full insert mRNA sequence Length = 1348 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaatcg 28 ||||||||||||||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaatcg 23 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 21 attcggcacgaggcctcgtgc 1
>gb|AY113216.1| Drosophila melanogaster AT07420 full insert cDNA Length = 1395 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 cctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23
>dbj|AB229215.1| Aspergillus oryzae cDNA, contig sequence: AoEST6094 Length = 124 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 cggcacgaggcctcgtgccgaat 26 ||||||||||||||||||||||| Sbjct: 25 cggcacgaggcctcgtgccgaat 3 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccg 23 ||||||||||||||||||||||| Sbjct: 3 attcggcacgaggcctcgtgccg 25
>dbj|AB224727.1| Aspergillus oryzae cDNA, contig sequence: AoEST1576 Length = 1145 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 cggcacgaggcctcgtgccgaat 26 ||||||||||||||||||||||| Sbjct: 97 cggcacgaggcctcgtgccgaat 75 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccg 23 ||||||||||||||||||||||| Sbjct: 75 attcggcacgaggcctcgtgccg 97
>gb|BC028650.1| Mus musculus coronin 7, mRNA (cDNA clone IMAGE:1068082), with apparent retained intron Length = 1214 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 cggcacgaggcctcgtgccgaat 26 ||||||||||||||||||||||| Sbjct: 809 cggcacgaggcctcgtgccgaat 787 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccg 23 ||||||||||||||||||||||| Sbjct: 787 attcggcacgaggcctcgtgccg 809
>gb|AF134160.1|AF134160 Homo sapiens claudin-1 (CLDN1) mRNA, complete cds Length = 1237 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 cggcacgaggcctcgtgccgaat 26 ||||||||||||||||||||||| Sbjct: 25 cggcacgaggcctcgtgccgaat 3 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccg 23 ||||||||||||||||||||||| Sbjct: 3 attcggcacgaggcctcgtgccg 25
>gb|AF304353.1|AF304353 Lampetra fluviatilis endophilin SH3p4 mRNA, complete cds Length = 1337 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgaggg 37 ||||||||||||||||||||||| Sbjct: 1274 ctcgtgccgaatcggcacgaggg 1252
>gb|U80078.1|MMU80078 Mus musculus transcription factor BFCOL1 mRNA, complete cds Length = 2426 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 cggcacgaggcctcgtgccgaat 26 ||||||||||||||||||||||| Sbjct: 25 cggcacgaggcctcgtgccgaat 3 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgccg 23 ||||||||||||||||||||||| Sbjct: 3 attcggcacgaggcctcgtgccg 25
>gb|BC002907.2| Homo sapiens hypothetical protein FLJ20512, mRNA (cDNA clone MGC:10300 IMAGE:3941377), complete cds Length = 707 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 14 cctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||| Sbjct: 1 cctcgtgccgaatcggcacgagg 23 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 ggcctcgtgccgaatcggcacgagg 36 ||||||||||||| ||||||||||| Sbjct: 25 ggcctcgtgccgattcggcacgagg 1
>gb|AY112040.1| Zea mays CL19964_1 mRNA sequence Length = 634 Score = 46.1 bits (23), Expect = 0.11 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 7 cacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||||| ||||||||||| Sbjct: 634 cacgaggcctcgtgccgaattcggcacgagg 604 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtg 20 |||||||||||||||||||| Sbjct: 615 attcggcacgaggcctcgtg 634
>gb|AY849619.1| Magnaporthe grisea transporter-like protein mRNA, complete cds Length = 1770 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cctcgtgccgaatcggcacgagg 36 ||||||||||||||||||||||| Sbjct: 24 cctcgtgccgaatcggcacgagg 2 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 gcctcgtgccgaatcggcacgagg 36 |||||||||||| ||||||||||| Sbjct: 1 gcctcgtgccgattcggcacgagg 24
>gb|BT015177.1| Drosophila melanogaster SD19814 full insert cDNA Length = 5154 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 cctcgtgccgaatcggcacgag 35 |||||||||||||||||||||| Sbjct: 22 cctcgtgccgaatcggcacgag 1
>ref|XM_369401.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06063.4) partial mRNA Length = 3417 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 192 gatcatcgccatcatcctctgcatcgtctg 221 |||||||||||||| ||||| ||||||||| Sbjct: 2794 gatcatcgccatcaccctctccatcgtctg 2765
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 gcggcgcgcggcaagatgcaga 151 |||||||||||||||||||||| Sbjct: 1457583 gcggcgcgcggcaagatgcaga 1457604 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gctcgtgcgcggcttgccgg 263 |||||||||||||||||||| Sbjct: 3108177 gctcgtgcgcggcttgccgg 3108158
>emb|AJ420188.1|FSY420188 Fagus sylvatica partial mRNA for ACC synthase 1.1 (acs1.1 gene) Length = 941 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 ctcgtgccgaatcggcacgagg 36 |||||||||||||||||||||| Sbjct: 1 ctcgtgccgaatcggcacgagg 22
>emb|AJ505009.1|DLA505009 Dicentrarchus labrax partially processed transcript RNA for oestrogen receptor alpha (ERalpha gene) Length = 3812 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgagg 36 |||||||||||||||||||||| Sbjct: 31 ctcgtgccgaatcggcacgagg 10
>dbj|AB226552.1| Aspergillus oryzae cDNA, contig sequence: AoEST3414 Length = 751 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 ggcacgaggcctcgtgccgaat 26 |||||||||||||||||||||| Sbjct: 23 ggcacgaggcctcgtgccgaat 2 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgcc 22 |||||||||||||||||||||| Sbjct: 2 attcggcacgaggcctcgtgcc 23
>dbj|AB080201.1| Caenorhabditis elegans mRNA for C2-RGS protein, complete cds Length = 2427 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/33 (93%), Gaps = 2/33 (6%) Strand = Plus / Plus Query: 3 tcggcacgaggcctcgtgccgaatcggcacgag 35 |||||||||| ||||||||||||||||||||| Sbjct: 1 tcggcacgag--ctcgtgccgaatcggcacgag 31
>gb|AY050236.1| Drosophila melanogaster SD02116 full length cDNA Length = 2338 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 cctcgtgccgaatcggcacgag 35 |||||||||||||||||||||| Sbjct: 22 cctcgtgccgaatcggcacgag 1
>gb|AF049750.1|AF049750 Monodelphis domestica ModoVL10c Ig lambda light chain (Igl@) mRNA, complete cds Length = 775 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 cctcgtgccgaatcggcacgag 35 |||||||||||||||||||||| Sbjct: 30 cctcgtgccgaatcggcacgag 9
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcgctggtggtgatcatcgccatca 205 |||||||||||||||| |||||||| Sbjct: 1477387 gcgctggtggtgatcagcgccatca 1477411
>gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002B02, complete sequence Length = 148881 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 catactactaccagtctacca 467 ||||||||||||||||||||| Sbjct: 42885 catactactaccagtctacca 42865
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 tggtggtgatcatcgccatca 205 ||||||||||||||||||||| Sbjct: 3416690 tggtggtgatcatcgccatca 3416670
>gb|AY533301.1| Petroselinum crispum mitogen-activated protein kinase kinase 2 (MKK2) mRNA, complete cds Length = 1460 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 35 ctcgtgccgaatcggcacgag 15
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ctggtggcgctggtggtgatc 195 ||||||||||||||||||||| Sbjct: 4704701 ctggtggcgctggtggtgatc 4704721
>emb|AJ249225.1|XLA249225 Xenopus laevis mRNA for XFD-4' protein (fd-4' gene) Length = 2385 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AF460237.1| Solanum tuberosum Kunitz-type enzyme inhibitor S9C11 mRNA, complete cds Length = 774 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AC122827.3| Mus musculus BAC clone RP23-211N23 from chromosome 18, complete sequence Length = 194843 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagtacagt 445 ||||||||| ||||||||||||||| Sbjct: 194706 gtgtgtgtgtgtgtgttagtacagt 194730
>gb|DQ087285.1| Burkholderia pseudomallei phage phi52237, complete genome Length = 37639 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 gcggcgcgcggcaagatgcag 150 ||||||||||||||||||||| Sbjct: 17123 gcggcgcgcggcaagatgcag 17103
>gb|BC006261.1| Homo sapiens cDNA clone IMAGE:3947934, **** WARNING: chimeric clone **** Length = 3182 Score = 42.1 bits (21), Expect = 1.7 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 10 gaggcctcgtgccgaa-tcggcacgaggg 37 |||||||||||||||| |||||||||||| Sbjct: 1904 gaggcctcgtgccgaattcggcacgaggg 1876
>gb|BT008918.1| Triticum aestivum clone wpa1c.pk011.o13:fis, full insert mRNA sequence Length = 1151 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 21 attcggcacgaggcctcgtgc 1 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 gcacgaggcctcgtgccgaat 26 ||||||||||||||||||||| Sbjct: 1 gcacgaggcctcgtgccgaat 21
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 tggcgctggtggtgatcatcg 199 ||||||||||||||||||||| Sbjct: 335320 tggcgctggtggtgatcatcg 335340
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 gcggcgcgcggcaagatgcag 150 ||||||||||||||||||||| Sbjct: 159383 gcggcgcgcggcaagatgcag 159363
>emb|AJ312288.1|CEL312288 Caenorhabditis elegans partial mRNA for putative transcription factor (ceh-43 gene) Length = 1039 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AC161880.5| Mus musculus BAC clone RP23-261N13 from chromosome 18, complete sequence Length = 204676 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagtacagt 445 ||||||||| ||||||||||||||| Sbjct: 69143 gtgtgtgtgtgtgtgttagtacagt 69167
>dbj|AB229047.1| Aspergillus oryzae cDNA, contig sequence: AoEST5924 Length = 363 Score = 42.1 bits (21), Expect = 1.7 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 9 cgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||| ||||||||||| Sbjct: 29 cgaggcctcgtgccgaattcggcacgagg 1
>dbj|AB226784.1| Aspergillus oryzae cDNA, contig sequence: AoEST3646 Length = 742 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gcacgaggcctcgtgccgaat 26 ||||||||||||||||||||| Sbjct: 22 gcacgaggcctcgtgccgaat 2 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 2 attcggcacgaggcctcgtgc 22
>dbj|AB224198.1| Aspergillus oryzae cDNA, contig sequence: AoEST1040 Length = 925 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 gcacgaggcctcgtgccgaat 26 ||||||||||||||||||||| Sbjct: 22 gcacgaggcctcgtgccgaat 2 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggcctcgtgc 21 ||||||||||||||||||||| Sbjct: 2 attcggcacgaggcctcgtgc 22
>gb|AF465934.1| Elaeis oleifera DNA binding protein (DNAbp) mRNA, complete cds Length = 1601 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>gb|AF456360.1|AF456360 Caenorhabditis elegans immunoglobulin domain-containing protein F02G3.1 mRNA, complete cds Length = 3261 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 9 ctcgtgccgaatcggcacgag 29
>gb|AC123664.15| Mus musculus chromosome 5, clone RP23-224P16, complete sequence Length = 226777 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 cgtgtgtgtgagtgtgttagt 440 ||||||||||||||||||||| Sbjct: 65737 cgtgtgtgtgagtgtgttagt 65757
>gb|AC145765.2| Gasterosteus aculeatus clone CH213-7I21, complete sequence Length = 209087 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagta 441 ||||||||||||||||||||| Sbjct: 1019 gtgtgtgtgagtgtgttagta 1039
>gb|AF343876.1|AF343876 Clonorchis sinensis proline-rich antigen mRNA, partial cds Length = 826 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 catactactaccagtctacca 467 ||||||||||||||||||||| Sbjct: 17985779 catactactaccagtctacca 17985759
>gb|AY241394.1| Melopsittacus undulatus Mn superoxide dismutase (SOD2) mRNA, complete cds Length = 1101 Score = 42.1 bits (21), Expect = 1.7 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa-tcggcacgagg 36 ||||||||||||||||| ||| ||||||||||| Sbjct: 1 ggcacgaggcctcgtgcagaattcggcacgagg 33
>gb|AF302079.1|AF302079 Homo sapiens HSP22-like protein interacting protein 17 mRNA, complete cds Length = 903 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 28 ctcgtgccgaatcggcacgag 8
>gb|AY074433.1| Trichosurus vulpecula clone TrvuVK172 immunoglobulin kappa light chain variable region mRNA, partial cds Length = 467 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 26 ctcgtgccgaatcggcacgag 6
>gb|AY074427.1| Trichosurus vulpecula clone TrvuVK138 immunoglobulin kappa light chain variable region mRNA, partial cds Length = 467 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 26 ctcgtgccgaatcggcacgag 6
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 tgcccctggtggcgctggtgg 190 ||||||||||||||||||||| Sbjct: 924123 tgcccctggtggcgctggtgg 924143
>dbj|D13758.1|RICSS230 Oryza sativa ss230 mRNA for ras-related GTP binding protein, complete cds Length = 946 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 21 ctcgtgccgaatcggcacgag 1
>dbj|BS000126.1| Pan troglodytes chromosome 22 clone:PTB-128A24, map 22, complete sequences Length = 207747 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 tggtcgtgtgtgtgagtgtgt 436 ||||||||||||||||||||| Sbjct: 117023 tggtcgtgtgtgtgagtgtgt 117003
>gb|AF177671.1|AF177671 Rattus norvegicus ATX1 homolog protein Rah1p (rah1) mRNA, complete cds Length = 503 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgaatcggcacgag 21
>gb|AY109271.1| Zea mays PCO074636 mRNA sequence Length = 503 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 46 ctcgtgccgaatcggcacgag 26
>gb|AY106084.1| Zea mays PCO072275 mRNA sequence Length = 1307 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 28 ctcgtgccgaatcggcacgag 8
>gb|AF026844.1|AF026844 Homo sapiens ribosomal protein L41 mRNA, complete cds Length = 444 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 1 ctcgtgccgaatcggcacgag 21
>dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, section 74/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 tggtcgtgtgtgtgagtgtgt 436 ||||||||||||||||||||| Sbjct: 278725 tggtcgtgtgtgtgagtgtgt 278705
>gb|U71195.1|GMU71195 Glycine max napin-type 2S albumin 3 mRNA, complete cds Length = 777 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 4 ctcgtgccgaatcggcacgag 24
>dbj|AB080019.1| Xenopus laevis mRNA for galectin family xgalectin-VIa, complete cds Length = 1427 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 10 ctcgtgccgaatcggcacgag 30
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 gcggcgcgcggcaagatgcag 150 ||||||||||||||||||||| Sbjct: 1583390 gcggcgcgcggcaagatgcag 1583370
>gb|AY610374.1| Sus scrofa clone reje37b_g23.y1.abd, mRNA sequence Length = 668 Score = 42.1 bits (21), Expect = 1.7 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 10 gaggcctcgtgccgaa-tcggcacgaggg 37 |||||||||||||||| |||||||||||| Sbjct: 559 gaggcctcgtgccgaattcggcacgaggg 531
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 catactactaccagtctacca 467 ||||||||||||||||||||| Sbjct: 18076194 catactactaccagtctacca 18076174
>gb|AF074334.1|AF074334 Drosophila melanogaster cyclin H homolog (CycH) mRNA, complete cds Length = 1244 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 27 ctcgtgccgaatcggcacgag 7
>gb|AF008243.1|AF008243 Homo sapiens cosmid clone C102H1064 from 21q22.2, complete sequence Length = 34037 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 tggtcgtgtgtgtgagtgtgt 436 ||||||||||||||||||||| Sbjct: 19514 tggtcgtgtgtgtgagtgtgt 19534
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 422 tgtgtgtgagtgtgttagtacagta 446 |||||||||||||||||| |||||| Sbjct: 283797 tgtgtgtgagtgtgttagcacagta 283821
>emb|AJ420446.1|HSA420446 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1646617 Length = 778 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ttcggcacgaggcctcgtgcc 22 ||||||||||||||||||||| Sbjct: 21 ttcggcacgaggcctcgtgcc 1 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ggcacgaggcctcgtgccgaa 25 ||||||||||||||||||||| Sbjct: 1 ggcacgaggcctcgtgccgaa 21
>dbj|AB018544.1| Hydra magnipapillata mRNA for Hym-176 preprohormone, complete cds Length = 620 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctcgtgccgaatcggcacgag 35 ||||||||||||||||||||| Sbjct: 26 ctcgtgccgaatcggcacgag 6
>dbj|AP000160.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 12/16, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 tggtcgtgtgtgtgagtgtgt 436 ||||||||||||||||||||| Sbjct: 26142 tggtcgtgtgtgtgagtgtgt 26122
>dbj|AP000018.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 9/13 Length = 100000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 tggtcgtgtgtgtgagtgtgt 436 ||||||||||||||||||||| Sbjct: 60538 tggtcgtgtgtgtgagtgtgt 60518
>dbj|AP001417.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB7T-ERG region, clone:D40 Length = 89723 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 tggtcgtgtgtgtgagtgtgt 436 ||||||||||||||||||||| Sbjct: 9290 tggtcgtgtgtgtgagtgtgt 9270
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gtgatcatcgccatcatcct 209 |||||||||||||||||||| Sbjct: 504199 gtgatcatcgccatcatcct 504218
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ggtggtgatcatcgccatca 205 |||||||||||||||||||| Sbjct: 141240 ggtggtgatcatcgccatca 141259
>gb|AC145089.7| Mus musculus chromosome 3, clone RP23-268K12, complete sequence Length = 167657 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 139241 gtgtgtgtgagtgtgttagt 139222
>gb|BT016288.1| Zea mays clone Contig121 mRNA sequence Length = 1032 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 gcctcgtgccgaatcggcacgagg 36 ||||||||||||||| |||||||| Sbjct: 179 gcctcgtgccgaatcagcacgagg 202
>gb|AC161260.2| Mus musculus BAC clone RP23-448A11 from chromosome 9, complete sequence Length = 190608 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 catgtaatgtaagctcttga 485 |||||||||||||||||||| Sbjct: 103570 catgtaatgtaagctcttga 103551
>gb|AC161229.10| Mus musculus chromosome 7, clone RP24-88J19, complete sequence Length = 189105 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 159163 gtgtgtgtgagtgtgttagt 159144
>gb|BC078673.1| Homo sapiens cDNA clone IMAGE:6090579 Length = 2676 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 13 gcctcgtgccgaa-tcggcacgagggct 39 ||||||||||||| |||||||||||||| Sbjct: 1940 gcctcgtgccgaattcggcacgagggct 1913
>ref|XM_959093.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial mRNA Length = 2619 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 tcgccatcatcctctgcatc 216 |||||||||||||||||||| Sbjct: 2066 tcgccatcatcctctgcatc 2047
>ref|XM_330572.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial mRNA Length = 2619 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 tcgccatcatcctctgcatc 216 |||||||||||||||||||| Sbjct: 2066 tcgccatcatcctctgcatc 2047
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gctcgtgcgcggcttgccgg 263 |||||||||||||||||||| Sbjct: 1772939 gctcgtgcgcggcttgccgg 1772920
>gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome 17, complete sequence Length = 203971 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cgtgtgtgtgagtgtgttag 439 |||||||||||||||||||| Sbjct: 122091 cgtgtgtgtgagtgtgttag 122072
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gctgcccctggtggcgctgg 187 |||||||||||||||||||| Sbjct: 3007799 gctgcccctggtggcgctgg 3007818
>gb|AY810367.1| Schistosoma japonicum SJCHGC09331 protein mRNA, partial cds Length = 1249 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 14 cctcgtgccgaat-cggcacgagggctt 40 ||||||||||||| |||||||||||||| Sbjct: 116 cctcgtgccgaattcggcacgagggctt 143
>gb|AY707613.1| Plasmodium vivax isolate NS06 merozoite surface protein 4 gene, partial cds Length = 846 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ccatcatcctctgcatcgtc 219 |||||||||||||||||||| Sbjct: 650 ccatcatcctctgcatcgtc 631
>gb|AY559315.1| Lycopersicon esculentum ethylene response factor 5 (ERF5) mRNA, complete cds Length = 1347 Score = 40.1 bits (20), Expect = 6.8 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 14 cctcgtgccgaat-cggcacgagggcttaagcttct 48 ||||||||||||| |||||||||||| |||||||| Sbjct: 864 cctcgtgccgaattcggcacgagggcaaaagcttct 899
>gb|AC148831.2| Pan troglodytes BAC clone CH251-134F2 from chromosome 7, complete sequence Length = 163831 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccctggtggcgctggtggtg 192 |||||||||||||||||||| Sbjct: 143351 ccctggtggcgctggtggtg 143332 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ccctggtggcgctggtggtg 192 |||||||||||||||||||| Sbjct: 20480 ccctggtggcgctggtggtg 20499
>gb|AC140265.2| Mus musculus BAC clone RP23-318B18 from chromosome 6, complete sequence Length = 178580 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 33744 gtgtgtgtgagtgtgttagt 33763
>emb|CT009659.6| Mouse DNA sequence from clone CH29-604F11 on chromosome 17, complete sequence Length = 147269 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cgtgtgtgtgagtgtgttag 439 |||||||||||||||||||| Sbjct: 93830 cgtgtgtgtgagtgtgttag 93849
>gb|AC130210.4| Mus musculus BAC clone RP24-344N22 from chromosome 7, complete sequence Length = 186858 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 185043 gtgtgtgtgagtgtgttagt 185062
>gb|AC129183.3| Mus musculus BAC clone RP23-350M13 from chromosome 3, complete sequence Length = 201277 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 79924 gtgtgtgtgagtgtgttagt 79905
>emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chromosome 17, complete sequence Length = 197576 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 atgtgaaatgtactattgattgat 406 ||||||||||||||||| |||||| Sbjct: 89569 atgtgaaatgtactattcattgat 89546
>gb|AY223352.1| Schistosoma japonicum clone ZZD933 mRNA sequence Length = 1555 Score = 40.1 bits (20), Expect = 6.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 4 cggcacgaggcctcgtgccgaa-tcggcacga 34 ||||||||| |||||||||||| ||||||||| Sbjct: 1447 cggcacgagccctcgtgccgaattcggcacga 1416
>gb|AY223029.1| Schistosoma japonicum clone ZZD1143 mRNA sequence Length = 1290 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 11 aggcctcgtgccgaa-tcggcacgaggg 37 ||||||||||||||| |||||||||||| Sbjct: 1113 aggcctcgtgccgaattcggcacgaggg 1086
>gb|AE004164.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 72 of 251 of the complete chromosome Length = 12695 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tggtggtgatcatcgccatc 204 |||||||||||||||||||| Sbjct: 11619 tggtggtgatcatcgccatc 11600
>gb|BC082756.1| Homo sapiens cDNA clone IMAGE:6538874, **** WARNING: chimeric clone **** Length = 5575 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 12 ggcctcgtgccgaa-tcggcacgagggc 38 |||||||||||||| ||||||||||||| Sbjct: 3532 ggcctcgtgccgaattcggcacgagggc 3559
>gb|AC108554.8| Rattus norvegicus 7 BAC CH230-81L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 157107 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 130285 gtgtgtgtgagtgtgttagt 130304
>emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on chromosome 10 Contains a ribosomal protein S6 (RPS6) pseudogene, complete sequence Length = 169841 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 caggaggagccacagcttca 103 |||||||||||||||||||| Sbjct: 72138 caggaggagccacagcttca 72157
>emb|AL512368.9| Human DNA sequence from clone RP11-387L5 on chromosome 6, complete sequence Length = 147619 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 cgtgtgtgtgagtgtgttagtaca 443 |||||||||| ||||||||||||| Sbjct: 96900 cgtgtgtgtgtgtgtgttagtaca 96877
>emb|AL353597.20| Human DNA sequence from clone RP1-153P14 on chromosome 6 Contains the gene for a novel protein (containing KIAA0082, FLJ22156 and FLJ20341), three novel genes, the gene for a novel protein and three CpG islands, complete sequence Length = 162451 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gtgtgttttgtctgcagccc 343 |||||||||||||||||||| Sbjct: 98104 gtgtgttttgtctgcagccc 98123
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gtgatctcgctgcccctggt 179 |||||||||||||||||||| Sbjct: 1808085 gtgatctcgctgcccctggt 1808104
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ggcgctggtggtgatcatcg 199 |||||||||||||||||||| Sbjct: 3514229 ggcgctggtggtgatcatcg 3514210
>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2 Length = 98769 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tcgccatcatcctctgcatc 216 |||||||||||||||||||| Sbjct: 43640 tcgccatcatcctctgcatc 43659
>gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chromosome unknown, complete sequence Length = 201789 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ggtcgtgtgtgtgagtgtgt 436 |||||||||||||||||||| Sbjct: 59787 ggtcgtgtgtgtgagtgtgt 59806
>emb|BX511310.13| Zebrafish DNA sequence from clone DKEY-274M14 in linkage group 23, complete sequence Length = 169760 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 47926 gtgtgtgtgagtgtgttagt 47907
>gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, complete sequence Length = 197397 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 36072 gtgtgtgtgagtgtgttagt 36091
>gb|AC099770.11| Mus musculus Strain C57BL6/J chromosome 5 BAC, RP23-349C19, Complete Sequence, complete sequence Length = 191223 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 74554 gtgtgtgtgagtgtgttagt 74535
>gb|AC182735.3| Pan troglodytes BAC clone CH251-257K2 from chromosome 7, complete sequence Length = 156146 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ccctggtggcgctggtggtg 192 |||||||||||||||||||| Sbjct: 32780 ccctggtggcgctggtggtg 32761
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gtgatctcgctgcccctggt 179 |||||||||||||||||||| Sbjct: 1811775 gtgatctcgctgcccctggt 1811794
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tggtggcgctggtggtgatc 195 |||||||||||||||||||| Sbjct: 1660237 tggtggcgctggtggtgatc 1660218
>gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, complete sequence Length = 203375 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 tgtgtgtgagtgtgttagta 441 |||||||||||||||||||| Sbjct: 78669 tgtgtgtgagtgtgttagta 78650
>dbj|AB228636.1| Aspergillus oryzae cDNA, contig sequence: AoEST5509 Length = 117 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 14 cctcgtgccgaat-cggcacgagggctt 40 ||||||||||||| |||||||||||||| Sbjct: 1 cctcgtgccgaattcggcacgagggctt 28
>dbj|AB228307.1| Aspergillus oryzae cDNA, contig sequence: AoEST5180 Length = 573 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 14 cctcgtgccgaat-cggcacgagggctt 40 ||||||||||||| |||||||||||||| Sbjct: 1 cctcgtgccgaattcggcacgagggctt 28
>dbj|AB236766.1| Trifolium pratense RNA for putative DEAD-box protein abstrakt, complete cds, clone: C1562 Length = 2301 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 cctcgtgccgaatcggcacgaggg 37 ||||||||||||| |||||||||| Sbjct: 23 cctcgtgccgaattggcacgaggg 46
>gb|AC022068.6| Homo sapiens chromosome 8, clone RP11-523C15, complete sequence Length = 202043 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctcatgctgtcgtggtgtgttttg 333 |||||||||| ||||||||||||| Sbjct: 67636 ctcatgctgtggtggtgtgttttg 67613
>gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55F-56X, BAC clone BACR08F09, complete sequence Length = 192358 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 137377 gtgtgtgtgagtgtgttagt 137358
>gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold Length = 583711 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 cgtgtgtgtgagtgtgttagtaca 443 ||||||||||||||||| |||||| Sbjct: 1570 cgtgtgtgtgagtgtgtgagtaca 1547
>gb|AC020905.9| Homo sapiens chromosome 19 clone CTB-70G10, complete sequence Length = 141513 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 caggaggagccacagcttca 103 |||||||||||||||||||| Sbjct: 125574 caggaggagccacagcttca 125593
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gctcgtgcgcggcttgccgg 263 |||||||||||||||||||| Sbjct: 2255884 gctcgtgcgcggcttgccgg 2255865
>gb|AC116820.11| Mus musculus chromosome 7, clone RP24-358B4, complete sequence Length = 152733 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 4363 gtgtgtgtgagtgtgttagt 4344
>gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosome 16, complete sequence Length = 202286 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 133728 gtgtgtgtgagtgtgttagt 133747
>gb|AF294499.1|AF294499 Micropterus dolomieu microsatellite Mdo 11 sequence Length = 174 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 74 gtgtgtgtgagtgtgttagt 93
>ref|NM_022638.1| Rattus norvegicus transient receptor potential cation channel, subfamily C, member 2 (Trpc2), mRNA Length = 3340 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gcaacaggaggagccacagc 99 |||||||||||||||||||| Sbjct: 2152 gcaacaggaggagccacagc 2133
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 tggcgctggtggtgatcatcgcca 202 |||||||||||||| ||||||||| Sbjct: 3167652 tggcgctggtggtgctcatcgcca 3167675
>gb|AC073385.14| Homo sapiens chromosome 8, clone RP11-304E16, complete sequence Length = 125535 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 tgtgtgtgagtgtgttagta 441 |||||||||||||||||||| Sbjct: 6869 tgtgtgtgagtgtgttagta 6888
>emb|AL840630.16| Zebrafish DNA sequence from clone CH211-279L11 in linkage group 17, complete sequence Length = 149164 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 23735 gtgtgtgtgagtgtgttagt 23716
>gb|AC171180.2| Pan troglodytes BAC clone CH251-283C10 from chromosome unknown, complete sequence Length = 166310 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ggtcgtgtgtgtgagtgtgt 436 |||||||||||||||||||| Sbjct: 116012 ggtcgtgtgtgtgagtgtgt 116031
>gb|AC005780.1|AC005780 Homo sapiens chromosome 19, cosmid F23049, complete sequence Length = 42393 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 caggaggagccacagcttca 103 |||||||||||||||||||| Sbjct: 3207 caggaggagccacagcttca 3226
>emb|AJ302017.1|PAB302017 Picea abies mRNA for putative plastidial w-3 fatty acid desaturase (fad3 gene) Length = 2248 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tcgtgccgaatcggcacgag 35 |||||||||||||||||||| Sbjct: 62 tcgtgccgaatcggcacgag 81
>gb|AF136401.1|AF136401 Rattus norvegicus TRP2 mRNA, complete cds Length = 3340 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gcaacaggaggagccacagc 99 |||||||||||||||||||| Sbjct: 2152 gcaacaggaggagccacagc 2133
>emb|Z23706.1|HS234VE1 H. sapiens (D8S518) DNA segment containing (CA) repeat; clone AFM234ve1; single read Length = 351 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctcatgctgtcgtggtgtgttttg 333 |||||||||| ||||||||||||| Sbjct: 32 ctcatgctgtggtggtgtgttttg 9
>emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chromosome 16, complete sequence Length = 194283 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 156301 gtgtgtgtgagtgtgttagt 156320
>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete sequence Length = 242365 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 133841 gtgtgtgtgagtgtgttagt 133822
>dbj|AP006197.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-360J22, complete sequence Length = 159320 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tggtgatcatcgccatcatc 207 |||||||||||||||||||| Sbjct: 13414 tggtgatcatcgccatcatc 13433
>dbj|AP006195.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-278C16, complete sequence Length = 157800 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tggtgatcatcgccatcatc 207 |||||||||||||||||||| Sbjct: 91719 tggtgatcatcgccatcatc 91738
>gb|AF026469.1|AF026469 Mus musculus ubiquitin-specific protease (Unp) gene, complete cds Length = 47338 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 catgtaatgtaagctcttga 485 |||||||||||||||||||| Sbjct: 19550 catgtaatgtaagctcttga 19569
>gb|AY609807.1| Sus scrofa clone Clu_32102.scr.msk.p1.Contig3, mRNA sequence Length = 1935 Score = 40.1 bits (20), Expect = 6.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 10 gaggcctcgtgccgaa-tcggcacgagg 36 |||||||||||||||| ||||||||||| Sbjct: 346 gaggcctcgtgccgaattcggcacgagg 373
>emb|CT010508.10| Mouse DNA sequence from clone RP23-250G8 on chromosome 9, complete sequence Length = 223547 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 catgtaatgtaagctcttga 485 |||||||||||||||||||| Sbjct: 16220 catgtaatgtaagctcttga 16239
>gb|AC004345.1|AC004345 Drosophila melanogaster DNA sequence (P1 DS07069 (D244)), complete sequence Length = 86419 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 79341 gtgtgtgtgagtgtgttagt 79360
>gb|AC127284.5| Mus musculus BAC clone RP23-334N1 from 3, complete sequence Length = 178989 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 98070 gtgtgtgtgagtgtgttagt 98089
>gb|AC161488.7| Mus musculus chromosome 7, clone RP24-300N16, complete sequence Length = 183220 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 2173 gtgtgtgtgagtgtgttagt 2192
>gb|AC161441.21| Mus musculus chromosome 7, clone RP24-158L15, complete sequence Length = 159403 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gtgtgtgtgagtgtgttagt 440 |||||||||||||||||||| Sbjct: 130747 gtgtgtgtgagtgtgttagt 130766
>dbj|AB041992.1| Homo sapiens genomic DNA, chromosome 6q21, clone:576A9, complete sequence Length = 112519 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tggtgatcatcgccatcatc 207 |||||||||||||||||||| Sbjct: 47596 tggtgatcatcgccatcatc 47615
>gb|AC132804.2| Homo sapiens chromosome 16 clone LA16c-336H4, complete sequence Length = 36331 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 atcatcgccatcatcctctgcatc 216 ||||||||||||||||||| |||| Sbjct: 41 atcatcgccatcatcctcttcatc 64
>dbj|AP002529.1| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 2/4 Length = 300000 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tggtgatcatcgccatcatc 207 |||||||||||||||||||| Sbjct: 247891 tggtgatcatcgccatcatc 247910 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,146,412 Number of Sequences: 3902068 Number of extensions: 4146412 Number of successful extensions: 156340 Number of sequences better than 10.0: 205 Number of HSP's better than 10.0 without gapping: 191 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 154966 Number of HSP's gapped (non-prelim): 1388 length of query: 503 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 481 effective length of database: 17,147,199,772 effective search space: 8247803090332 effective search space used: 8247803090332 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
