ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal35l03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73... 107 3e-23
2APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3... 58 2e-08
3APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7... 55 2e-07
4APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5... 45 1e-04
5APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9... 45 2e-04
6PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37... 42 0.001
7MP62_LYTPI (P91753) Mitotic apparatus protein p62 35 0.21
8PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95... 34 0.37
9AXN1_HUMAN (O15169) Axin-1 (Axis inhibition protein 1) (hAxin) 32 1.8
10CAPP_RHOPA (O32483) Phosphoenolpyruvate carboxylase (EC 4.1.1.31... 31 2.4
11AXN1_RAT (O70239) Axin-1 (Axis inhibition protein 1) (rAxin) 30 4.0
12PLSB_SPIOL (Q43869) Glycerol-3-phosphate acyltransferase, chloro... 30 5.3
13CTCF_RAT (Q9R1D1) Transcriptional repressor CTCF (CCCTC-binding ... 29 9.0
14AXN_XENLA (Q9YGY0) Axin (Axis inhibition protein) (xAxin) 29 9.0

>PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73|
           (Pseudo-response regulator 73) (OsPRR73)
          Length = 767

 Score =  107 bits (267), Expect = 3e-23
 Identities = 61/105 (58%), Positives = 74/105 (70%), Gaps = 3/105 (2%)
 Frame = +1

Query: 286 MVSAGQAGADGPSSSDIRGIGNGAVENQNGHALKPNEDKEWRGGSKEEDWPSTHSAPPG- 462
           M SA +AG D PS  D++G GNG +EN  GH+ KP E++EWR G  E D P+ HS PP  
Sbjct: 1   MGSACEAGTDEPSRDDVKGTGNGILEN--GHSHKP-EEEEWRNGMGE-DLPNGHSTPPEP 56

Query: 463 --LDEHKQQQQDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALL 591
              DE K+ Q  +++RWE+FLPVKTLRVLLVENDD TR VV ALL
Sbjct: 57  QQTDEQKEHQV-QIVRWERFLPVKTLRVLLVENDDSTRQVVSALL 100



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>APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3|
           (Pseudo-response regulator 3)
          Length = 495

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 24/43 (55%), Positives = 35/43 (81%)
 Frame = +1

Query: 463 LDEHKQQQQDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALL 591
           + + +QQ    V++WE++LPV++L+VLLVENDD TRH+V ALL
Sbjct: 41  ISQQQQQPLAHVVKWERYLPVRSLKVLLVENDDSTRHIVTALL 83



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>APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7|
           (Pseudo-response regulator 7)
          Length = 727

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = +1

Query: 460 GLDEHKQQQQDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALL 591
           GL     QQ    + WE+FL V+T+RVLLVENDDCTR++V ALL
Sbjct: 54  GLQIPLSQQTAATVCWERFLHVRTIRVLLVENDDCTRYIVTALL 97



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>APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5|
           (Pseudo-response regulator 5)
          Length = 558

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = +1

Query: 490 DRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALL 591
           D +++WE+FLP   LRVLLVE DD TR ++ ALL
Sbjct: 36  DGLVKWERFLPKIALRVLLVEADDSTRQIIAALL 69



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>APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9|
           (Pseudo-response regulator 9)
          Length = 468

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +1

Query: 448 SAPPGLDEHKQQ-QQDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALL 591
           S+  G++  K + +   V++WEK+LP   LRVLLVE+D  TR ++ ALL
Sbjct: 8   SSDDGMETIKNRVKSSEVVQWEKYLPKTVLRVLLVESDYSTRQIITALL 56



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>PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37|
           (Pseudo-response regulator 37) (OsPRR37)
          Length = 742

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +1

Query: 484 QQDRVIRWEKFLPVKTLRVLLVENDDCTRHVVRALL 591
           Q+   + WE+F+  KT++VLLV++DD TR VV ALL
Sbjct: 46  QRPPQVCWERFIQKKTIKVLLVDSDDSTRQVVSALL 81



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>MP62_LYTPI (P91753) Mitotic apparatus protein p62|
          Length = 411

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +1

Query: 313 DGPSSSDIRGIGNGAVENQNGHALKPNEDKE----WRGGSKEEDWPSTHSAPPGLDEHKQ 480
           DG S    R + NG+VEN  GHA+  +ED E    ++ G +EE+  +T       DE ++
Sbjct: 227 DGTSK---RKVPNGSVEN--GHAIDDDEDDEEDEDYKVGDEEEEEEATSGEEEEEDEEEE 281

Query: 481 QQQD 492
           +++D
Sbjct: 282 EEED 285



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>PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95|
           (Pseudo-response regulator 95) (OsPRR95)
          Length = 623

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +1

Query: 502 RWEKFLPVKTLRVLLVENDDCTRHVVRALL 591
           R  + LP   +RVLL E DD TRH++ ALL
Sbjct: 33  RETRMLPRMPVRVLLAEGDDSTRHIICALL 62



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>AXN1_HUMAN (O15169) Axin-1 (Axis inhibition protein 1) (hAxin)|
          Length = 862

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +1

Query: 301 QAGADGPSSSDIRGIGNGAVENQNGHALKPNEDKEWRGGSKEEDWPSTHSAPPG 462
           + G++ P     +  G+G  +  +G+    NED+EW+     ++     +APPG
Sbjct: 212 RTGSESPKVCSDQSSGSGTGKGISGYLPTLNEDEEWKCDQDMDEDDGRDAAPPG 265



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>CAPP_RHOPA (O32483) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 936

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 232 ALRWVQKWACCIQLLESWEVEGRAVAAW 149
           A+ WV  WA C  +L  W   G AV+AW
Sbjct: 768 AIPWVFSWAQCRLMLPGWYGFGSAVSAW 795



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>AXN1_RAT (O70239) Axin-1 (Axis inhibition protein 1) (rAxin)|
          Length = 827

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +1

Query: 301 QAGADGPSSSDIRGIGNGAVENQNGHALKPNEDKEWRGGSKEEDWPSTHSAPP 459
           + G++ P     +  G+G  +  +G+    NED+EW+     ++     S PP
Sbjct: 212 RTGSESPKVCSDQSSGSGTGKGMSGYLPTLNEDEEWKCDQDADEDDGRDSVPP 264



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>PLSB_SPIOL (Q43869) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 472

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
 Frame = -1

Query: 569 RVQSSFSTSKTLS------VLTGRNFSQRMTRSCCCCLCSSK 462
           RV SSFSTS + S      V+  R+F  R   S  CC CSSK
Sbjct: 18  RVSSSFSTSSSSSSSAFSAVVFRRSFFTRFNSSLICC-CSSK 58



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>CTCF_RAT (Q9R1D1) Transcriptional repressor CTCF (CCCTC-binding factor)|
           (CTCFL paralog) (11-zinc finger protein)
          Length = 737

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +1

Query: 346 GNGAVENQNGHALKPNE-DKEWRGGSKEEDWPSTHSAPPGLDEHKQQQQDRV 498
           G   VE +NG   K ++  ++ +  SK+ED   + +A P LD+++++++  V
Sbjct: 579 GPDGVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEEEEEPAV 630



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>AXN_XENLA (Q9YGY0) Axin (Axis inhibition protein) (xAxin)|
          Length = 842

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +1

Query: 307 GADGPSSSDIRGIGNGAVENQNGHALKPNEDKEWR---GGSKEED 432
           G + P +   +  G+G  +  +G+    NED+EWR   GG  E +
Sbjct: 214 GGESPKNYSDQSSGSGTGKGPSGYLPTLNEDEEWRCDQGGEHERE 258


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,396,983
Number of Sequences: 219361
Number of extensions: 1472269
Number of successful extensions: 4665
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4646
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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