ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal35k15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_197204.1| Oryza sativa (japonica cultivar-group) putative... 476 e-131
2dbj|AK105626.1| Oryza sativa (japonica cultivar-group) cDNA clon... 476 e-131
3dbj|AK059628.1| Oryza sativa (japonica cultivar-group) cDNA clon... 476 e-131
4dbj|AK067982.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-129
5gb|AY105414.1| Zea mays PCO079032 mRNA sequence 432 e-118
6gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 gen... 206 5e-50
7dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 206 5e-50
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 206 5e-50
9gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 48 0.026
10gb|AC127689.4| Mus musculus BAC clone RP24-206I5 from chromosome... 44 0.41
11gb|AC158945.6| Mus musculus chromosome 5, clone RP23-286J20, com... 44 0.41
12emb|CR383660.9| Zebrafish DNA sequence from clone DKEY-1H22 in l... 42 1.6
13gb|AY278739.1| Rattus norvegicus paraplegin (Spg7) mRNA, complet... 42 1.6
14emb|BX548054.19| Zebrafish DNA sequence from clone CH211-237N4 i... 42 1.6
15gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
16gb|AC011446.6|AC011446 Homo sapiens chromosome 19 clone CTC-250I... 42 1.6
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18ref|NM_181388.2| Rattus norvegicus spastic paraplegia 7 homolog ... 42 1.6
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
20gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, com... 40 6.4
21gb|BT017401.1| Zea mays clone EL01N0329A09.c mRNA sequence 40 6.4
22gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.4
23gb|AC139562.8| Mus musculus chromosome 5, clone RP24-180G11, com... 40 6.4
24ref|XM_389623.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 6.4
25gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosom... 40 6.4
26gb|DQ096844.1| Xenopus laevis lapl06 mRNA, complete sequence 40 6.4
27gb|AC103876.2| Homo sapiens chromosome 15, clone CTD-2282O12, co... 40 6.4
28dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.4
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.4
30gb|AY108979.1| Zea mays PCO080401 mRNA sequence 40 6.4
31gb|AC162461.6| Mus musculus chromosome 5, clone RP23-265I19, com... 40 6.4
32dbj|AB070951.1| Streptomyces avermitilis peptide-2 biosynthetic ... 40 6.4

>ref|NM_197204.1| Oryza sativa (japonica cultivar-group) putative PKCq-interacting
           protein (OSJNBa0078O01.9), mRNA
          Length = 1840

 Score =  476 bits (240), Expect = e-131
 Identities = 336/368 (91%)
 Strand = Plus / Plus

                                                                       
Query: 6   gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 65
           |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 188 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 247

                                                                       
Query: 66  gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggttgaagct 125
           ||||||||||| |||||||||||||||||| |||||||  |||||||| |||||||||||
Sbjct: 248 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggttgaagct 307

                                                                       
Query: 126 gaagaacaaccggaaatttcagaggcatatggagttacagcagtgccatactttgttttc 185
           || |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 308 gaggaacaacccgaaatttcagaggcatatggagttacagcagtgccatattttgttttc 367

                                                                       
Query: 186 tgcaaggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaat 245
           |  |||||||| ||| ||||||||||  ||||||| ||||| ||||||||| ||||||||
Sbjct: 368 ttgaaggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaat 427

                                                                       
Query: 246 aaggttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttg 305
           ||||||||||||||||||||||||||||  |||||| |||||||||| ||||||||| ||
Sbjct: 428 aaggttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctg 487

                                                                       
Query: 306 ggggtggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatgga 365
           || |||||||| |||||||||||||| ||||| || ||||| ||||||| ||||||||||
Sbjct: 488 ggtgtggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatgga 547

                   
Query: 366 tcttctgc 373
            |||||||
Sbjct: 548 gcttctgc 555



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                       
Query: 399 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 458
           |||||||||||||||||||||||||| ||| ||||||||||||||||||  || |   ||
Sbjct: 590 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 649

                            
Query: 459 ccaaggtgtgggttcag 475
           ||||||||||| |||||
Sbjct: 650 ccaaggtgtggtttcag 666



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>dbj|AK105626.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C12, full
           insert sequence
          Length = 1441

 Score =  476 bits (240), Expect = e-131
 Identities = 336/368 (91%)
 Strand = Plus / Plus

                                                                       
Query: 6   gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 65
           |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 154 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 213

                                                                       
Query: 66  gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggttgaagct 125
           ||||||||||| |||||||||||||||||| |||||||  |||||||| |||||||||||
Sbjct: 214 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggttgaagct 273

                                                                       
Query: 126 gaagaacaaccggaaatttcagaggcatatggagttacagcagtgccatactttgttttc 185
           || |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 274 gaggaacaacccgaaatttcagaggcatatggagttacagcagtgccatattttgttttc 333

                                                                       
Query: 186 tgcaaggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaat 245
           |  |||||||| ||| ||||||||||  ||||||| ||||| ||||||||| ||||||||
Sbjct: 334 ttgaaggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaat 393

                                                                       
Query: 246 aaggttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttg 305
           ||||||||||||||||||||||||||||  |||||| |||||||||| ||||||||| ||
Sbjct: 394 aaggttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctg 453

                                                                       
Query: 306 ggggtggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatgga 365
           || |||||||| |||||||||||||| ||||| || ||||| ||||||| ||||||||||
Sbjct: 454 ggtgtggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatgga 513

                   
Query: 366 tcttctgc 373
            |||||||
Sbjct: 514 gcttctgc 521



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                       
Query: 399 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 458
           |||||||||||||||||||||||||| ||| ||||||||||||||||||  || |   ||
Sbjct: 556 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 615

                            
Query: 459 ccaaggtgtgggttcag 475
           ||||||||||| |||||
Sbjct: 616 ccaaggtgtggtttcag 632



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>dbj|AK059628.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H12, full
           insert sequence
          Length = 1815

 Score =  476 bits (240), Expect = e-131
 Identities = 336/368 (91%)
 Strand = Plus / Plus

                                                                       
Query: 6   gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 65
           |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 198 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 257

                                                                       
Query: 66  gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggttgaagct 125
           ||||||||||| |||||||||||||||||| |||||||  |||||||| |||||||||||
Sbjct: 258 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggttgaagct 317

                                                                       
Query: 126 gaagaacaaccggaaatttcagaggcatatggagttacagcagtgccatactttgttttc 185
           || |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 318 gaggaacaacccgaaatttcagaggcatatggagttacagcagtgccatattttgttttc 377

                                                                       
Query: 186 tgcaaggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaat 245
           |  |||||||| ||| ||||||||||  ||||||| ||||| ||||||||| ||||||||
Sbjct: 378 ttgaaggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaat 437

                                                                       
Query: 246 aaggttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttg 305
           ||||||||||||||||||||||||||||  |||||| |||||||||| ||||||||| ||
Sbjct: 438 aaggttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctg 497

                                                                       
Query: 306 ggggtggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatgga 365
           || |||||||| |||||||||||||| ||||| || ||||| ||||||| ||||||||||
Sbjct: 498 ggtgtggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatgga 557

                   
Query: 366 tcttctgc 373
            |||||||
Sbjct: 558 gcttctgc 565



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                       
Query: 399 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 458
           |||||||||||||||||||||||||| ||| ||||||||||||||||||  || |   ||
Sbjct: 600 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 659

                            
Query: 459 ccaaggtgtgggttcag 475
           ||||||||||| |||||
Sbjct: 660 ccaaggtgtggtttcag 676



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>dbj|AK067982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121J12, full
           insert sequence
          Length = 1949

 Score =  468 bits (236), Expect = e-129
 Identities = 335/368 (91%)
 Strand = Plus / Plus

                                                                       
Query: 6   gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 65
           |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 198 gcgcgggctgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 257

                                                                       
Query: 66  gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggttgaagct 125
           ||||||||||| |||||||||||||||||| |||||||  |||||||| |||||||||||
Sbjct: 258 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggttgaagct 317

                                                                       
Query: 126 gaagaacaaccggaaatttcagaggcatatggagttacagcagtgccatactttgttttc 185
           || |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 318 gaggaacaacccgaaatttcagaggcatatggagttacagcagtgccatattttgttttc 377

                                                                       
Query: 186 tgcaaggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaat 245
           |  |||||||| ||| ||||||||||  ||||||| ||||| ||||||||| ||||||||
Sbjct: 378 ttgaaggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaat 437

                                                                       
Query: 246 aaggttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttg 305
           ||||||||||||||||||||||||||||  |||||| |||||||||| ||||||||| ||
Sbjct: 438 aaggttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctg 497

                                                                       
Query: 306 ggggtggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatgga 365
           || |||||||| |||||||||||||| ||||| || ||||| ||||||| ||||||||||
Sbjct: 498 ggtgtggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatgga 557

                   
Query: 366 tcttctgc 373
            |||||||
Sbjct: 558 gcttctgc 565



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                       
Query: 399 ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 458
           |||||||||||||||||||||||||| ||| ||||||||||||||||||  || |   ||
Sbjct: 600 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 659

                            
Query: 459 ccaaggtgtgggttcag 475
           ||||||||||| |||||
Sbjct: 660 ccaaggtgtggtttcag 676



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>gb|AY105414.1| Zea mays PCO079032 mRNA sequence
          Length = 2077

 Score =  432 bits (218), Expect = e-118
 Identities = 326/362 (90%)
 Strand = Plus / Plus

                                                                       
Query: 21  gtgcacttctgggcggcctggtgcgaggcctccaagcagatggacgaggtcttcgcccac 80
           ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 329 gtgcacttctgggcgtcctggtgcgaggcgtccaagcagatggacgaggtcttcgcgcac 388

                                                                       
Query: 81  ctcgccgtcgacttcccccacgcgctcttcctcagggttgaagctgaagaacaaccggaa 140
           ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||
Sbjct: 389 ctcgccgtcgacttcccccacgcggccttcctccgggttgaagctgaagaacaacctgaa 448

                                                                       
Query: 141 atttcagaggcatatggagttacagcagtgccatactttgttttctgcaaggaaggcaaa 200
           || |||||||| |||||||||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 449 atatcagaggcgtatggagttacagcggtgccatattttgttttctgcaaggaaggaaaa 508

                                                                       
Query: 201 cctgttgataccttggagggcgcaaacccagccagcctggccaataaggttgcaaagtta 260
             ||| ||||| |||||||| | |||||||||||||||||||||||||||||||||  ||
Sbjct: 509 attgtcgatactttggagggagtaaacccagccagcctggccaataaggttgcaaaagta 568

                                                                       
Query: 261 gctgggcctgccaatgttgctcagtctgctgtacctgctagcttgggggtggctgccggg 320
           ||||||||||| | ||||||| |||||||||||||||||||| | || || ||||| |||
Sbjct: 569 gctgggcctgctagtgttgctgagtctgctgtacctgctagccttggagtcgctgctggg 628

                                                                       
Query: 321 cctgctgtactcgaaaaagtccaagaaatggcacggcaaaatggatcttctgctgctgaa 380
           ||||||||||| |||||  ||||| | ||||||| || ||||||||||||||||| ||||
Sbjct: 629 cctgctgtacttgaaaacatccaaaagatggcacagcgaaatggatcttctgctgttgaa 688

             
Query: 381 ag 382
           ||
Sbjct: 689 ag 690



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                       
Query: 388 tgaagaagcgtttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaa 447
           |||| ||||| |||||||||||||||||||||||||| ||  | ||||||||||||||||
Sbjct: 720 tgaataagcgattggagcagcttgtcaattcccatcccgtgtttttatttatgaagggaa 779

                                        
Query: 448 atccaggagaaccaaggtgtgggttcagc 476
             |||| | ||||||||||||| ||||||
Sbjct: 780 ccccagaacaaccaaggtgtggtttcagc 808



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>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete
             sequence
          Length = 146664

 Score =  206 bits (104), Expect = 5e-50
 Identities = 164/184 (89%)
 Strand = Plus / Plus

                                                                         
Query: 190   aggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaataagg 249
             ||||||| ||| ||||||||||  ||||||| ||||| ||||||||| ||||||||||||
Sbjct: 86068 aggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaataagg 86127

                                                                         
Query: 250   ttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttggggg 309
             ||||||||||||||||||||||||  |||||| |||||||||| ||||||||| |||| |
Sbjct: 86128 ttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctgggtg 86187

                                                                         
Query: 310   tggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatggatctt 369
             ||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||||| |||
Sbjct: 86188 tggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatggagctt 86247

                 
Query: 370   ctgc 373
             ||||
Sbjct: 86248 ctgc 86251



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                         
Query: 6     gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 65
             |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 84047 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 84106

                                                                  
Query: 66    gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggt 118
             ||||||||||| |||||||||||||||||| |||||||  |||||||| ||||
Sbjct: 84107 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggt 84159



 Score =  117 bits (59), Expect = 3e-23
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                         
Query: 116   ggttgaagctgaagaacaaccggaaatttcagaggcatatggagttacagcagtgccata 175
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 85333 ggttgaagctgaggaacaacccgaaatttcagaggcatatggagttacagcagtgccata 85392

                        
Query: 176   ctttgttttct 186
              ||||||||||
Sbjct: 85393 ttttgttttct 85403



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                         
Query: 399   ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 458
             |||||||||||||||||||||||||| ||| ||||||||||||||||||  || |   ||
Sbjct: 86286 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 86345

                              
Query: 459   ccaaggtgtgggttcag 475
             ||||||||||| |||||
Sbjct: 86346 ccaaggtgtggtttcag 86362



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  206 bits (104), Expect = 5e-50
 Identities = 164/184 (89%)
 Strand = Plus / Plus

                                                                            
Query: 190      aggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaataagg 249
                ||||||| ||| ||||||||||  ||||||| ||||| ||||||||| ||||||||||||
Sbjct: 18582657 aggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaataagg 18582716

                                                                            
Query: 250      ttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttggggg 309
                ||||||||||||||||||||||||  |||||| |||||||||| ||||||||| |||| |
Sbjct: 18582717 ttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctgggtg 18582776

                                                                            
Query: 310      tggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatggatctt 369
                ||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||||| |||
Sbjct: 18582777 tggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatggagctt 18582836

                    
Query: 370      ctgc 373
                ||||
Sbjct: 18582837 ctgc 18582840



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                            
Query: 6        gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 65
                |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 18580636 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 18580695

                                                                     
Query: 66       gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggt 118
                ||||||||||| |||||||||||||||||| |||||||  |||||||| ||||
Sbjct: 18580696 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggt 18580748



 Score =  117 bits (59), Expect = 3e-23
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                            
Query: 116      ggttgaagctgaagaacaaccggaaatttcagaggcatatggagttacagcagtgccata 175
                |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 18581922 ggttgaagctgaggaacaacccgaaatttcagaggcatatggagttacagcagtgccata 18581981

                           
Query: 176      ctttgttttct 186
                 ||||||||||
Sbjct: 18581982 ttttgttttct 18581992



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                            
Query: 399      ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 458
                |||||||||||||||||||||||||| ||| ||||||||||||||||||  || |   ||
Sbjct: 18582875 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 18582934

                                 
Query: 459      ccaaggtgtgggttcag 475
                ||||||||||| |||||
Sbjct: 18582935 ccaaggtgtggtttcag 18582951



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  206 bits (104), Expect = 5e-50
 Identities = 164/184 (89%)
 Strand = Plus / Plus

                                                                            
Query: 190      aggaaggcaaacctgttgataccttggagggcgcaaacccagccagcctggccaataagg 249
                ||||||| ||| ||||||||||  ||||||| ||||| ||||||||| ||||||||||||
Sbjct: 18593110 aggaaggtaaaactgttgatactctggagggtgcaaatccagccagcttggccaataagg 18593169

                                                                            
Query: 250      ttgcaaagttagctgggcctgccaatgttgctcagtctgctgtacctgctagcttggggg 309
                ||||||||||||||||||||||||  |||||| |||||||||| ||||||||| |||| |
Sbjct: 18593170 ttgcaaagttagctgggcctgccagcgttgctgagtctgctgtgcctgctagcctgggtg 18593229

                                                                            
Query: 310      tggctgccgggcctgctgtactcgaaaaagtccaagaaatggcacggcaaaatggatctt 369
                ||||||| |||||||||||||| ||||| || ||||| ||||||| |||||||||| |||
Sbjct: 18593230 tggctgctgggcctgctgtacttgaaaaggttcaagagatggcacagcaaaatggagctt 18593289

                    
Query: 370      ctgc 373
                ||||
Sbjct: 18593290 ctgc 18593293



 Score =  168 bits (85), Expect = 1e-38
 Identities = 106/113 (93%)
 Strand = Plus / Plus

                                                                            
Query: 6        gcgcgggccgccgcggtgcacttctgggcggcctggtgcgaggcctccaagcagatggac 65
                |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 18591089 gcgcgggccgccgcggtgcacttctgggcggcgtggtgcgaggcgtccaagcagatggac 18591148

                                                                     
Query: 66       gaggtcttcgcccacctcgccgtcgacttcccccacgcgctcttcctcagggt 118
                ||||||||||| |||||||||||||||||| |||||||  |||||||| ||||
Sbjct: 18591149 gaggtcttcgcgcacctcgccgtcgacttctcccacgccgtcttcctccgggt 18591201



 Score =  117 bits (59), Expect = 3e-23
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                            
Query: 116      ggttgaagctgaagaacaaccggaaatttcagaggcatatggagttacagcagtgccata 175
                |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 18592375 ggttgaagctgaggaacaacccgaaatttcagaggcatatggagttacagcagtgccata 18592434

                           
Query: 176      ctttgttttct 186
                 ||||||||||
Sbjct: 18592435 ttttgttttct 18592445



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                            
Query: 399      ttggagcagcttgtcaattcccatcctgtcatcttatttatgaagggaaatccaggagaa 458
                |||||||||||||||||||||||||| ||| ||||||||||||||||||  || |   ||
Sbjct: 18593328 ttggagcagcttgtcaattcccatcccgtcttcttatttatgaagggaacccctgagcaa 18593387

                                 
Query: 459      ccaaggtgtgggttcag 475
                ||||||||||| |||||
Sbjct: 18593388 ccaaggtgtggtttcag 18593404



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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 2       cggcgcgcgggccgccgcggtgca 25
               ||||||||||||||||||||||||
Sbjct: 3458278 cggcgcgcgggccgccgcggtgca 3458255



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>gb|AC127689.4| Mus musculus BAC clone RP24-206I5 from chromosome 5, complete sequence
          Length = 155413

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 333   gaaaaagtccaagaaatggcac 354
             ||||||||||||||||||||||
Sbjct: 18372 gaaaaagtccaagaaatggcac 18351



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>gb|AC158945.6| Mus musculus chromosome 5, clone RP23-286J20, complete sequence
          Length = 210182

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 333  gaaaaagtccaagaaatggcac 354
            ||||||||||||||||||||||
Sbjct: 5746 gaaaaagtccaagaaatggcac 5767



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>emb|CR383660.9| Zebrafish DNA sequence from clone DKEY-1H22 in linkage group 14,
             complete sequence
          Length = 139631

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 365   atcttctgctgctgaaagtac 385
             |||||||||||||||||||||
Sbjct: 74747 atcttctgctgctgaaagtac 74727



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>gb|AY278739.1| Rattus norvegicus paraplegin (Spg7) mRNA, complete cds
          Length = 2479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 110 cctcagggttgaagctgaagaacaa 134
           ||||||||||||||| |||||||||
Sbjct: 359 cctcagggttgaagcagaagaacaa 383



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>emb|BX548054.19| Zebrafish DNA sequence from clone CH211-237N4 in linkage group 14,
             complete sequence
          Length = 128658

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 365   atcttctgctgctgaaagtac 385
             |||||||||||||||||||||
Sbjct: 42691 atcttctgctgctgaaagtac 42711



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>gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0043E10, complete sequence
          Length = 124591

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    cgccgtcgacttcccccacgc 103
             |||||||||||||||||||||
Sbjct: 67129 cgccgtcgacttcccccacgc 67149



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>gb|AC011446.6|AC011446 Homo sapiens chromosome 19 clone CTC-250I14, complete sequence
          Length = 115932

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 148   aggcatatggagttacagcagtgcc 172
             |||||||||||| ||||||||||||
Sbjct: 40140 aggcatatggagatacagcagtgcc 40116



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 83       cgccgtcgacttcccccacgc 103
                |||||||||||||||||||||
Sbjct: 22127575 cgccgtcgacttcccccacgc 22127555



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>ref|NM_181388.2| Rattus norvegicus spastic paraplegia 7 homolog (human) (Spg7), mRNA
          Length = 2479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 110 cctcagggttgaagctgaagaacaa 134
           ||||||||||||||| |||||||||
Sbjct: 359 cctcagggttgaagcagaagaacaa 383



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 83       cgccgtcgacttcccccacgc 103
                |||||||||||||||||||||
Sbjct: 22437486 cgccgtcgacttcccccacgc 22437466



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>gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, complete sequence
          Length = 156244

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    ctgctagcttgggggtggct 314
              ||||||||||||||||||||
Sbjct: 106649 ctgctagcttgggggtggct 106668



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>gb|BT017401.1| Zea mays clone EL01N0329A09.c mRNA sequence
          Length = 1199

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 448 atccaggagaaccaaggtgt 467
           ||||||||||||||||||||
Sbjct: 869 atccaggagaaccaaggtgt 888



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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     tcttcgcccacctcgccgtc 89
              ||||||||||||||||||||
Sbjct: 728189 tcttcgcccacctcgccgtc 728170



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>gb|AC139562.8| Mus musculus chromosome 5, clone RP24-180G11, complete sequence
          Length = 168158

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 417    tcccatcctgtcatcttatt 436
              ||||||||||||||||||||
Sbjct: 126122 tcccatcctgtcatcttatt 126141



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>ref|XM_389623.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09447.1)
            partial mRNA
          Length = 2970

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   ctccaagcagatggacgagg 69
            ||||||||||||||||||||
Sbjct: 2895 ctccaagcagatggacgagg 2914



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>gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosome 14, complete sequence
          Length = 163978

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    actttgttttctgcaaggaa 194
              ||||||||||||||||||||
Sbjct: 119332 actttgttttctgcaaggaa 119351



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>gb|DQ096844.1| Xenopus laevis lapl06 mRNA, complete sequence
          Length = 843

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 ggaaggcaaacctgttgata 210
           ||||||||||||||||||||
Sbjct: 556 ggaaggcaaacctgttgata 575



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>gb|AC103876.2| Homo sapiens chromosome 15, clone CTD-2282O12, complete sequence
          Length = 113199

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   gccagcctggccaataaggt 250
             ||||||||||||||||||||
Sbjct: 23992 gccagcctggccaataaggt 23973



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       gcggcgcgcgggccgccgcg 20
               ||||||||||||||||||||
Sbjct: 4519324 gcggcgcgcgggccgccgcg 4519305



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 4       gcgcgcgggccgccgcggtg 23
               ||||||||||||||||||||
Sbjct: 3290947 gcgcgcgggccgccgcggtg 3290928



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>gb|AY108979.1| Zea mays PCO080401 mRNA sequence
          Length = 602

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 448 atccaggagaaccaaggtgt 467
           ||||||||||||||||||||
Sbjct: 519 atccaggagaaccaaggtgt 538



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>gb|AC162461.6| Mus musculus chromosome 5, clone RP23-265I19, complete sequence
          Length = 233632

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   tcccatcctgtcatcttatt 436
             ||||||||||||||||||||
Sbjct: 14204 tcccatcctgtcatcttatt 14223



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>dbj|AB070951.1| Streptomyces avermitilis peptide-2 biosynthetic gene cluster
          Length = 32748

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    gcggcgcgcgggccgccgcg 20
            ||||||||||||||||||||
Sbjct: 1536 gcggcgcgcgggccgccgcg 1555


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,893,434
Number of Sequences: 3902068
Number of extensions: 4893434
Number of successful extensions: 138796
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138188
Number of HSP's gapped (non-prelim): 608
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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