| Clone Name | baal35k06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_481988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 392 bits (198), Expect = e-106 Identities = 371/431 (86%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 104 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 163 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 164 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 223 Query: 162 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatntagcggaact 221 |||||||| |||| |||||||||||||||||||| |||||||| || | || || || Sbjct: 224 gagatcgagaccatgaagaagtataacgctggaacaaacaaggcggcgtccagtggcaca 283 Query: 222 tccctcaacaccaagcggctcgacgacgacactganaacctttcccatgagcgtgnntna 281 |||||||||||||||||||| || |||||||| || | |||| |||||||||||| | | Sbjct: 284 tccctcaacaccaagcggctggatgacgacaccgagagccttgcccatgagcgtgtctca 343 Query: 282 agcnacctgaanaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 341 || ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 344 agtgacctgaagaaaaacctcatgcaagcaaggctggacaagaagatgacccaggcacag 403 Query: 342 cttgctcagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcg 401 ||||| |||||||||||||||||||| |||||||||||||||||| |||| || || || Sbjct: 404 cttgcacagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagct 463 Query: 402 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 461 ||||||||| | ||||| || || ||||| || ||||| |||||| | |||||||| || Sbjct: 464 attccgaaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggc 523 Query: 462 aagaagtaatg 472 ||||| ||||| Sbjct: 524 aagaaataatg 534
>dbj|AK061882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F01, full insert sequence Length = 815 Score = 392 bits (198), Expect = e-106 Identities = 371/431 (86%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 104 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 163 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 164 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 223 Query: 162 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatntagcggaact 221 |||||||| |||| |||||||||||||||||||| |||||||| || | || || || Sbjct: 224 gagatcgagaccatgaagaagtataacgctggaacaaacaaggcggcgtccagtggcaca 283 Query: 222 tccctcaacaccaagcggctcgacgacgacactganaacctttcccatgagcgtgnntna 281 |||||||||||||||||||| || |||||||| || | |||| |||||||||||| | | Sbjct: 284 tccctcaacaccaagcggctggatgacgacaccgagagccttgcccatgagcgtgtctca 343 Query: 282 agcnacctgaanaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 341 || ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 344 agtgacctgaagaaaaacctcatgcaagcaaggctggacaagaagatgacccaggcacag 403 Query: 342 cttgctcagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcg 401 ||||| |||||||||||||||||||| |||||||||||||||||| |||| || || || Sbjct: 404 cttgcacagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagct 463 Query: 402 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 461 ||||||||| | ||||| || || ||||| || ||||| |||||| | |||||||| || Sbjct: 464 attccgaaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggc 523 Query: 462 aagaagtaatg 472 ||||| ||||| Sbjct: 524 aagaaataatg 534
>dbj|AK120339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060M10, full insert sequence Length = 823 Score = 392 bits (198), Expect = e-106 Identities = 371/431 (86%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 107 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 166 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 167 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 226 Query: 162 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatntagcggaact 221 |||||||| |||| |||||||||||||||||||| |||||||| || | || || || Sbjct: 227 gagatcgagaccatgaagaagtataacgctggaacaaacaaggcggcgtccagtggcaca 286 Query: 222 tccctcaacaccaagcggctcgacgacgacactganaacctttcccatgagcgtgnntna 281 |||||||||||||||||||| || |||||||| || | |||| |||||||||||| | | Sbjct: 287 tccctcaacaccaagcggctggatgacgacaccgagagccttgcccatgagcgtgtctca 346 Query: 282 agcnacctgaanaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 341 || ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 347 agtgacctgaagaaaaacctcatgcaagcaaggctggacaagaagatgacccaggcacag 406 Query: 342 cttgctcagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcg 401 ||||| |||||||||||||||||||| |||||||||||||||||| |||| || || || Sbjct: 407 cttgcacagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagct 466 Query: 402 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 461 ||||||||| | ||||| || || ||||| || ||||| |||||| | |||||||| || Sbjct: 467 attccgaaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggc 526 Query: 462 aagaagtaatg 472 ||||| ||||| Sbjct: 527 aagaaataatg 537
>dbj|AK120022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C04, full insert sequence Length = 1727 Score = 392 bits (198), Expect = e-106 Identities = 371/431 (86%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 104 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 163 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 164 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 223 Query: 162 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatntagcggaact 221 |||||||| |||| |||||||||||||||||||| |||||||| || | || || || Sbjct: 224 gagatcgagaccatgaagaagtataacgctggaacaaacaaggcggcgtccagtggcaca 283 Query: 222 tccctcaacaccaagcggctcgacgacgacactganaacctttcccatgagcgtgnntna 281 |||||||||||||||||||| || |||||||| || | |||| |||||||||||| | | Sbjct: 284 tccctcaacaccaagcggctggatgacgacaccgagagccttgcccatgagcgtgtctca 343 Query: 282 agcnacctgaanaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 341 || ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 344 agtgacctgaagaaaaacctcatgcaagcaaggctggacaagaagatgacccaggcacag 403 Query: 342 cttgctcagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcg 401 ||||| |||||||||||||||||||| |||||||||||||||||| |||| || || || Sbjct: 404 cttgcacagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagct 463 Query: 402 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 461 ||||||||| | ||||| || || ||||| || ||||| |||||| | |||||||| || Sbjct: 464 attccgaaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggc 523 Query: 462 aagaagtaatg 472 ||||| ||||| Sbjct: 524 aagaaataatg 534
>gb|AY106376.1| Zea mays PCO106666 mRNA sequence Length = 903 Score = 349 bits (176), Expect = 7e-93 Identities = 361/425 (84%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| ||||| || ||| |||||||||||||||||||| | || |||||||||| ||| Sbjct: 182 atggccgggatcgggccgatcaggcaggactgggagccggtggttgtgcggaagaaggca 241 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 242 cccaccgccgctgccaagaaggatgagaaggccgtcaacgccgcgcgccgctccggcgcg 301 Query: 162 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatntagcggaact 221 |||||||| |||| ||||||| |||||||| | ||||||||| || | ||||| || Sbjct: 302 gagatcgagaccatgaagaagttcaacgctggtatgaacaaggcggcgtccagcggcaca 361 Query: 222 tccctcaacaccaagcggctcgacgacgacactganaacctttcccatgagcgtgnntna 281 ||||||||||||||||| |||||||||||||| || ||||| |||||||||| | | Sbjct: 362 tccctcaacaccaagcgcctcgacgacgacacagagaacctcgcccatgagcgagttcca 421 Query: 282 agcnacctgaanaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 341 || ||||||| ||||| || |||||||||||||| ||||||||| ||||||||||||| Sbjct: 422 agtgacctgaagaaaaatctcatgcaagcaaggctcgataagaagttgacccaggcacag 481 Query: 342 cttgctcagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcg 401 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 482 cttgctcagatgatcaatgagaagccacaggtgatccaggagtatgagtcaggcaaggca 541 Query: 402 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 461 ||||| ||| | ||||| ||||| |||||||||||||| || ||| | ||||||||| || Sbjct: 542 attcccaaccagcagatcattggcaagctcgagagggccctgggaacgaagctgcgtggc 601 Query: 462 aagaa 466 ||||| Sbjct: 602 aagaa 606
>gb|BT018329.1| Zea mays clone EL01T0208G01.c mRNA sequence Length = 700 Score = 341 bits (172), Expect = 2e-90 Identities = 360/425 (84%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| ||||| || ||| |||| ||||||||||||||| | || |||||||||| ||| Sbjct: 114 atggccgggatcgggccgatcagacaggactgggagccggtggttgtgcggaagaaggca 173 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 174 cccaccgccgctgccaagaaggatgagaaggccgtcaacgccgcgcgccgctccggcgcg 233 Query: 162 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatntagcggaact 221 |||||||| |||| |||||||| |||||||| | ||||||||| || | ||||| || Sbjct: 234 gagatcgagaccatgaagaagtacaacgctggtatgaacaaggcggcgtccagcggcaca 293 Query: 222 tccctcaacaccaagcggctcgacgacgacactganaacctttcccatgagcgtgnntna 281 ||||||||||||||||| |||||||| ||||| || ||||| |||||||||| | | Sbjct: 294 tccctcaacaccaagcgcctcgacgatgacacagagaacctcgcccatgagcgagttcca 353 Query: 282 agcnacctgaanaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 341 || ||||||| ||||| || |||||||||||||| ||||||||| ||||||||||||| Sbjct: 354 agtgacctgaagaaaaatctcatgcaagcaaggctcgataagaagttgacccaggcacag 413 Query: 342 cttgctcagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcg 401 |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 414 cttgctcagatgatcaatgagaagccacaggtgatccaggagtatgagtcaggcaaggca 473 Query: 402 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 461 ||||| ||| | ||||| ||||| |||||||||||||| || ||| | ||||||||| || Sbjct: 474 attcccaaccagcagatcattggcaagctcgagagggccctgggaacgaagctgcgtggc 533 Query: 462 aagaa 466 ||||| Sbjct: 534 aagaa 538
>gb|BT016361.1| Zea mays clone Contig194 mRNA sequence Length = 770 Score = 293 bits (148), Expect = 3e-76 Identities = 354/425 (83%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| ||||| || ||| |||||||||||||||||||| | || |||||||||| ||| Sbjct: 115 atggccgggatcggaccgatcaggcaggactgggagccggtcgttgtgcggaagaaggca 174 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| || |||||| |||| || Sbjct: 175 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcgcgccgcgccggtgcg 234 Query: 162 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatntagcggaact 221 |||||||| |||| |||||||| |||||||| ||||||||||| |||| ||||| || Sbjct: 235 gagatcgataccatgaagaagtacaacgctggtacgaacaaggcggcatccagcggtaca 294 Query: 222 tccctcaacaccaagcggctcgacgacgacactganaacctttcccatgagcgtgnntna 281 ||||||||||||||||| |||||||||||||| || ||||| |||||||||| | | Sbjct: 295 tccctcaacaccaagcgcctcgacgacgacaccgaaaacctcgcccatgagcgagttcca 354 Query: 282 agcnacctgaanaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 341 || | ||||| || || || |||||||||||||| ||||||||| |||| ||||||||| Sbjct: 355 agtgatctgaagaagaatctcatgcaagcaaggctcgataagaagctgacacaggcacaa 414 Query: 342 cttgctcagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcg 401 |||||||||||||| |||||||||||||||||||| |||||||| | || |||||||| Sbjct: 415 cttgctcagatgataaatgagaagccacaggtgattcaggagtatgaatcaggcaaggca 474 Query: 402 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 461 || || ||| | ||||| ||| | |||||||||||||| || ||| | ||| ||||| || Sbjct: 475 atccccaaccagcagatcattagcaagctcgagagggccctgggaaccaagttgcgtggc 534 Query: 462 aagaa 466 ||||| Sbjct: 535 aagaa 539
>gb|AY103611.1| Zea mays PCO106667 mRNA sequence Length = 964 Score = 293 bits (148), Expect = 3e-76 Identities = 354/425 (83%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| ||||| || ||| |||||||||||||||||||| | || |||||||||| ||| Sbjct: 240 atggccgggatcggaccgatcaggcaggactgggagccggtcgttgtgcggaagaaggca 299 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| || |||||| |||| || Sbjct: 300 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcgcgccgcgccggtgcg 359 Query: 162 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatntagcggaact 221 |||||||| |||| |||||||| |||||||| ||||||||||| |||| ||||| || Sbjct: 360 gagatcgataccatgaagaagtacaacgctggtacgaacaaggcggcatccagcggtaca 419 Query: 222 tccctcaacaccaagcggctcgacgacgacactganaacctttcccatgagcgtgnntna 281 ||||||||||||||||| |||||||||||||| || ||||| |||||||||| | | Sbjct: 420 tccctcaacaccaagcgcctcgacgacgacaccgaaaacctcgcccatgagcgagttcca 479 Query: 282 agcnacctgaanaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 341 || | ||||| || || || |||||||||||||| ||||||||| |||| ||||||||| Sbjct: 480 agtgatctgaagaagaatctcatgcaagcaaggctcgataagaagctgacacaggcacaa 539 Query: 342 cttgctcagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcg 401 |||||||||||||| |||||||||||||||||||| |||||||| | || |||||||| Sbjct: 540 cttgctcagatgataaatgagaagccacaggtgattcaggagtatgaatcaggcaaggca 599 Query: 402 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 461 || || ||| | ||||| ||| | |||||||||||||| || ||| | ||| ||||| || Sbjct: 600 atccccaaccagcagatcattagcaagctcgagagggccctgggaaccaagttgcgtggc 659 Query: 462 aagaa 466 ||||| Sbjct: 660 aagaa 664
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 16975143 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 16975202 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 16975203 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 16975262 Query: 162 gagatcgacaccaccaagaagt 183 |||||||| |||| ||||||| Sbjct: 16975263 gagatcgagaccatgaagaagt 16975284 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 348 cagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcgattccg 407 |||||||||||||||||||| |||||||||||||||||| |||| || || || |||||| Sbjct: 16977607 cagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagctattccg 16977666 Query: 408 aacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagcaagaag 467 ||| | ||||| || || ||||| || ||||| |||||| | |||||||| ||||||| Sbjct: 16977667 aaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggcaagaaa 16977726 Query: 468 taatg 472 ||||| Sbjct: 16977727 taatg 16977731 Score = 95.6 bits (48), Expect = 2e-16 Identities = 70/79 (88%) Strand = Plus / Plus Query: 268 atgagcgtgnntnaagcnacctgaanaaaaaccttatgcaagcaaggctggataagaaga 327 ||||||||| | ||| ||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 16977414 atgagcgtgtctcaagtgacctgaagaaaaacctcatgcaagcaaggctggacaagaaga 16977473 Query: 328 tgacccaggcacaacttgc 346 ||||||||||||| ||||| Sbjct: 16977474 tgacccaggcacagcttgc 16977492 Score = 61.9 bits (31), Expect = 2e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 184 ataacgctggaacgaacaaggctgcatntagcggaacttccctcaacaccaagcggctcg 243 ||||||||||||| |||||||| || | || || || |||||||||||||||||||| | Sbjct: 16975682 ataacgctggaacaaacaaggcggcgtccagtggcacatccctcaacaccaagcggctgg 16975741 Query: 244 acgacgacac 253 | |||||||| Sbjct: 16975742 atgacgacac 16975751
>dbj|AP004663.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E02 Length = 144294 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 10660 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 10719 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 10720 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 10779 Query: 162 gagatcgacaccaccaagaagt 183 |||||||| |||| ||||||| Sbjct: 10780 gagatcgagaccatgaagaagt 10801 Score = 97.6 bits (49), Expect = 4e-17 Identities = 106/125 (84%) Strand = Plus / Plus Query: 348 cagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcgattccg 407 |||||||||||||||||||| |||||||||||||||||| |||| || || || |||||| Sbjct: 13124 cagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagctattccg 13183 Query: 408 aacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagcaagaag 467 ||| | ||||| || || ||||| || ||||| |||||| | |||||||| ||||||| Sbjct: 13184 aaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggcaagaaa 13243 Query: 468 taatg 472 ||||| Sbjct: 13244 taatg 13248 Score = 95.6 bits (48), Expect = 2e-16 Identities = 70/79 (88%) Strand = Plus / Plus Query: 268 atgagcgtgnntnaagcnacctgaanaaaaaccttatgcaagcaaggctggataagaaga 327 ||||||||| | ||| ||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 12931 atgagcgtgtctcaagtgacctgaagaaaaacctcatgcaagcaaggctggacaagaaga 12990 Query: 328 tgacccaggcacaacttgc 346 ||||||||||||| ||||| Sbjct: 12991 tgacccaggcacagcttgc 13009 Score = 61.9 bits (31), Expect = 2e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 184 ataacgctggaacgaacaaggctgcatntagcggaacttccctcaacaccaagcggctcg 243 ||||||||||||| |||||||| || | || || || |||||||||||||||||||| | Sbjct: 11199 ataacgctggaacaaacaaggcggcgtccagtggcacatccctcaacaccaagcggctgg 11258 Query: 244 acgacgacac 253 | |||||||| Sbjct: 11259 atgacgacac 11268
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 42 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 101 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 122154 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 122213 Query: 102 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 161 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 122214 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 122273 Query: 162 gagatcgacaccaccaagaagt 183 |||||||| |||| ||||||| Sbjct: 122274 gagatcgagaccatgaagaagt 122295 Score = 95.6 bits (48), Expect = 2e-16 Identities = 70/79 (88%) Strand = Plus / Plus Query: 268 atgagcgtgnntnaagcnacctgaanaaaaaccttatgcaagcaaggctggataagaaga 327 ||||||||| | ||| ||||||| |||||||| ||||||||||||||||| ||||||| Sbjct: 124425 atgagcgtgtctcaagtgacctgaagaaaaacctcatgcaagcaaggctggacaagaaga 124484 Query: 328 tgacccaggcacaacttgc 346 ||||||||||||| ||||| Sbjct: 124485 tgacccaggcacagcttgc 124503 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 348 cagatgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcgattccg 407 |||||||||||||||||||| |||||||||||||||||| |||| || || || |||||| Sbjct: 124618 cagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagctattccg 124677 Query: 408 aac 410 ||| Sbjct: 124678 aac 124680 Score = 61.9 bits (31), Expect = 2e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 184 ataacgctggaacgaacaaggctgcatntagcggaacttccctcaacaccaagcggctcg 243 ||||||||||||| |||||||| || | || || || |||||||||||||||||||| | Sbjct: 122693 ataacgctggaacaaacaaggcggcgtccagtggcacatccctcaacaccaagcggctgg 122752 Query: 244 acgacgacac 253 | |||||||| Sbjct: 122753 atgacgacac 122762
>gb|AY084597.1| Arabidopsis thaliana clone 112835 mRNA, complete sequence Length = 726 Score = 81.8 bits (41), Expect = 2e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| |||| ||| | |||||||| || ||||||||||||||||||| |||||||| Sbjct: 371 aagaagctgactcagtcccaacttgcccatctgatcaatgagaagccacaagtgatccaa 430 Query: 381 gagtactagtcgggcaaggcgattccgaacaatcagataattggaaagctcgagagggca 440 || ||| ||||||| || || |||||||| | ||||| || |||||| ||||||||| Sbjct: 431 gaatacgagtcggggaaagcaattccgaatcaacagatcctttcaaagctggagagggca 490 Query: 441 cttggagctaagctgcgtagcaagaagta 469 ||||| ||||| || ||| | |||||||| Sbjct: 491 cttggtgctaaactccgtggaaagaagta 519
>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence Length = 110572 Score = 79.8 bits (40), Expect = 9e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 303 atgcaagcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgag 362 |||||| | ||| |||| |||||| | || ||||||||||||||||| || |||| |||| Sbjct: 36912 atgcaaactaggatggacaagaagcttactcaggcacaacttgctcaaattatcagtgag 36971 Query: 363 aagccacaggtgatccaggagtactagtcggg 394 ||||| || ||||||||||||||| ||||||| Sbjct: 36972 aagcctcaagtgatccaggagtacgagtcggg 37003
>ref|NM_115730.2| Arabidopsis thaliana DNA binding / transcription coactivator AT3G58680 mRNA, complete cds Length = 799 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| |||| ||| | |||||||| || ||||||||||||||||||| |||||||| Sbjct: 371 aagaagctgactcagtcccaacttgcccatctgatcaatgagaagccacaagtgatccaa 430 Query: 381 gagtactagtcgggcaaggcgattccgaacaatcagataattggaaagctcgagagggca 440 || ||| |||| || || || |||||||| | ||||| || |||||| ||||||||| Sbjct: 431 gaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaagctggagagggca 490 Query: 441 cttggagctaagctgcgtagcaagaagta 469 ||||| ||||| || ||| | |||||||| Sbjct: 491 cttggtgctaaactccgtggaaagaagta 519
>gb|AF339728.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 479 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| |||| ||| | |||||||| || ||||||||||||||||||| |||||||| Sbjct: 280 aagaagctgactcagtcccaacttgcccatctgatcaatgagaagccacaagtgatccaa 339 Query: 381 gagtactagtcgggcaaggcgattccgaacaatcagataattggaaagctcgagagggca 440 || ||| |||| || || || |||||||| | ||||| || |||||| ||||||||| Sbjct: 340 gaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaagctggagagggca 399 Query: 441 cttggagctaagctgcgtagcaagaagta 469 ||||| ||||| || ||| | |||||||| Sbjct: 400 cttggtgctaaactccgtggaaagaagta 428
>gb|AF326909.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 741 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| |||| ||| | |||||||| || ||||||||||||||||||| |||||||| Sbjct: 371 aagaagctgactcagtcccaacttgcccatctgatcaatgagaagccacaagtgatccaa 430 Query: 381 gagtactagtcgggcaaggcgattccgaacaatcagataattggaaagctcgagagggca 440 || ||| |||| || || || |||||||| | ||||| || |||||| ||||||||| Sbjct: 431 gaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaagctggagagggca 490 Query: 441 cttggagctaagctgcgtagcaagaagta 469 ||||| ||||| || ||| | |||||||| Sbjct: 491 cttggtgctaaactccgtggaaagaagta 519
>gb|AY081487.1| Arabidopsis thaliana transcriptional coactivator-like protein (At3g58680) mRNA, complete cds Length = 607 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| |||| ||| | |||||||| || ||||||||||||||||||| |||||||| Sbjct: 280 aagaagctgactcagtcccaacttgcccatctgatcaatgagaagccacaagtgatccaa 339 Query: 381 gagtactagtcgggcaaggcgattccgaacaatcagataattggaaagctcgagagggca 440 || ||| |||| || || || |||||||| | ||||| || |||||| ||||||||| Sbjct: 340 gaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaagctggagagggca 399 Query: 441 cttggagctaagctgcgtagcaagaagta 469 ||||| ||||| || ||| | |||||||| Sbjct: 400 cttggtgctaaactccgtggaaagaagta 428
>gb|AY042850.1| Arabidopsis thaliana transcriptional coactivator-like protein (T20N10_30) mRNA, complete cds Length = 724 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| |||| ||| | |||||||| || ||||||||||||||||||| |||||||| Sbjct: 371 aagaagctgactcagtcccaacttgcccatctgatcaatgagaagccacaagtgatccaa 430 Query: 381 gagtactagtcgggcaaggcgattccgaacaatcagataattggaaagctcgagagggca 440 || ||| |||| || || || |||||||| | ||||| || |||||| ||||||||| Sbjct: 431 gaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaagctggagagggca 490 Query: 441 cttggagctaagctgcgtagcaagaagta 469 ||||| ||||| || ||| | |||||||| Sbjct: 491 cttggtgctaaactccgtggaaagaagta 519
>gb|AF324717.2|AF324717 Arabidopsis thaliana AT3g58680 (AT3g58680/T20N10_30) mRNA, complete cds Length = 779 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| |||| ||| | |||||||| || ||||||||||||||||||| |||||||| Sbjct: 425 aagaagctgactcagtcccaacttgcccatctgatcaatgagaagccacaagtgatccaa 484 Query: 381 gagtactagtcgggcaaggcgattccgaacaatcagataattggaaagctcgagagggca 440 || ||| |||| || || || |||||||| | ||||| || |||||| ||||||||| Sbjct: 485 gaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaagctggagagggca 544 Query: 441 cttggagctaagctgcgtagcaagaagta 469 ||||| ||||| || ||| | |||||||| Sbjct: 545 cttggtgctaaactccgtggaaagaagta 573
>dbj|AB072698.1| Nicotiana tabacum NtMBF1a mRNA for putative multiprotein bridging factor 1, complete cds Length = 703 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 318 gataagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatc 377 ||||||||| |||||||||| |||||||| ||| |||| ||||||||||| || | ||| Sbjct: 335 gataagaagctgacccaggctcaacttgcccagttgataaatgagaagcctcaaatcatc 394 Query: 378 caggagtactagtcgggcaaggcgattcc 406 |||||||| |||| || ||||||||||| Sbjct: 395 caggagtatgagtctggaaaggcgattcc 423 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 132 gccgtcaacgctgcccgccgctccggcgccgagatcgacacca 174 ||||||||||| ||||| |||||||| || |||||||| |||| Sbjct: 149 gccgtcaacgccgcccgtcgctccggtgctgagatcgaaacca 191
>emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20N10 Length = 90273 Score = 67.9 bits (34), Expect = 4e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 352 tgatcaatgagaagccacaggtgatccaggagtactagtcgggcaaggcgattccgaaca 411 ||||||||||||||||||| |||||||| || ||| |||| || || || |||||||| Sbjct: 8362 tgatcaatgagaagccacaagtgatccaagaatacgagtctgggaaagcaattccgaatc 8421 Query: 412 atcagataattggaaagctcgagagggcacttggagctaagctgcgtagcaagaagta 469 | ||||| || |||||| |||||||||||||| ||||| || ||| | |||||||| Sbjct: 8422 aacagatcctttcaaagctggagagggcacttggtgctaaactccgtggaaagaagta 8479
>gb|AF232062.1|AF232062 Solanum tuberosum multiprotein bridging factor 1 mRNA, complete cds Length = 626 Score = 65.9 bits (33), Expect = 1e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| |||| ||| | ||||||||||| |||| ||||||||||||||| | ||||| Sbjct: 294 aagaagctgactcagtctcaacttgctcaattgataaatgagaagccacagattatccaa 353 Query: 381 gagtactagtcgggcaaggcgattccgaacaatcagataat 421 || ||| ||||||| ||||| ||||| ||| | |||||||| Sbjct: 354 gaatacgagtcgggaaaggcaattccaaaccaacagataat 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 132 gccgtcaacgctgcccgccgctccggcgccgagatcga 169 ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 105 gccgttaacgccgcccgtcgctccggcgccgagatcga 142
>ref|NM_129829.2| Arabidopsis thaliana DNA binding / transcription coactivator AT2G42680 mRNA, complete cds Length = 692 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| | |||||| | ||||||||||| || ||||||||||||||||| ||||| || Sbjct: 349 aagaagctaacccagtcccaacttgctcaaatcatcaatgagaagccacaagtgattcaa 408 Query: 381 gagta 385 ||||| Sbjct: 409 gagta 413
>gb|AY063014.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 460 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| | |||||| | ||||||||||| || ||||||||||||||||| ||||| || Sbjct: 280 aagaagctaacccagtcccaacttgctcaaatcatcaatgagaagccacaagtgattcaa 339 Query: 381 gagta 385 ||||| Sbjct: 340 gagta 344
>gb|AF370280.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 703 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| | |||||| | ||||||||||| || ||||||||||||||||| ||||| || Sbjct: 344 aagaagctaacccagtcccaacttgctcaaatcatcaatgagaagccacaagtgattcaa 403 Query: 381 gagta 385 ||||| Sbjct: 404 gagta 408
>emb|BX819434.1|CNS0A8ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| | |||||| | ||||||||||| || ||||||||||||||||| ||||| || Sbjct: 335 aagaagctaacccagtcccaacttgctcaaatcatcaatgagaagccacaagtgattcaa 394 Query: 381 gagta 385 ||||| Sbjct: 395 gagta 399
>gb|AY088140.1| Arabidopsis thaliana clone 41712 mRNA, complete sequence Length = 675 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 321 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 380 |||||| | |||||| | ||||||||||| || ||||||||||||||||| ||||| || Sbjct: 349 aagaagctaacccagtcccaacttgctcaaatcatcaatgagaagccacaagtgattcaa 408 Query: 381 gagta 385 ||||| Sbjct: 409 gagta 413
>emb|Z49698.1|RCJS21MR R.communis mRNA (unknown) Length = 674 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 330 acccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccaggagta 385 |||||||| || |||||||||||||||||||| ||||| ||| | ||||| ||||| Sbjct: 335 acccaggctcagcttgctcagatgatcaatgaaaagccccagataatccaagagta 390 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 117 aagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgccgagatcga 169 ||||||||||| |||| |||||||||||| || ||| | || ||||||||||| Sbjct: 122 aagaaggacgagaaggtcgtcaacgctgctcgtcgcgctggtgccgagatcga 174
>emb|BX826065.1|CNS0A4ZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL82ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 671 Score = 54.0 bits (27), Expect = 5e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 352 tgatcaatgagaagccacaggtgatccaggagtactagtc-gggcaaggcgattccgaac 410 ||||||||||||||||||| |||||||| || ||| |||| | | || || |||||||| Sbjct: 378 tgatcaatgagaagccacaagtgatccaagaatacgagtctgtggaaagcaattccgaat 437 Query: 411 aatcagataattggaaagctcgagagggcacttggagctaagctgcgtagcaagaagta 469 | ||||| || |||||| |||||||||||||| ||||| || ||| | |||||||| Sbjct: 438 caacagatcctttcaaagctggagagggcacttggtgctaaactccgtggaaagaagta 496
>gb|BC015500.1| Homo sapiens endothelial differentiation-related factor 1, transcript variant alpha, mRNA (cDNA clone MGC:9058 IMAGE:3903539), complete cds Length = 658 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 323 atcaatgagaagccacaggtgatc 346
>ref|NM_153200.1| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant beta, mRNA Length = 538 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 323 atcaatgagaagccacaggtgatc 346
>ref|NM_003792.2| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant alpha, mRNA Length = 658 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 323 atcaatgagaagccacaggtgatc 346
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 141481 atcaatgagaagccacaggtgatc 141458
>gb|BT009863.1| Homo sapiens endothelial differentiation-related factor 1 mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>emb|CR541914.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0633D for gene EDF1, endothelial differentiation-related factor 1; complete cds, without stopcodon Length = 444 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>emb|AJ005259.1|HSAJ5259 Homo sapiens mRNA for EDF-1 protein Length = 981 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 329 atcaatgagaagccacaggtgatc 352
>gb|AY888864.1| Synthetic construct Homo sapiens clone FLH109977.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>gb|AY888863.1| Synthetic construct Homo sapiens clone FLH109976.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>gb|AY888862.1| Synthetic construct Homo sapiens clone FLH109972.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>dbj|AB002283.2| Homo sapiens mRNA for hMBF1beta, complete cds Length = 538 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 332 atcaatgagaagccacaggtgatc 355
>gb|AY893963.1| Synthetic construct Homo sapiens clone FLH130861.01L endothelial differentiation-related factor 1 (EDF1) mRNA, partial cds Length = 447 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>dbj|AB002282.1| Homo sapiens mRNA for hMBF1alpha, complete cds Length = 636 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 354 atcaatgagaagccacaggtgatc 377 |||||||||||||||||||||||| Sbjct: 332 atcaatgagaagccacaggtgatc 355
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 cgccgagatcgacaccaccaa 178 ||||||||||||||||||||| Sbjct: 188853 cgccgagatcgacaccaccaa 188873
>gb|AE008743.2| Salmonella typhimurium LT2, section 49 of 220 of the complete genome Length = 62027 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 cggcgccgagatcgacaccaccaag 179 ||||||||||| ||||||||||||| Sbjct: 2374 cggcgccgagagcgacaccaccaag 2350
>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 4/20 Length = 294050 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 cggcgccgagatcgacaccaccaag 179 ||||||||||| ||||||||||||| Sbjct: 238701 cggcgccgagagcgacaccaccaag 238677
>gb|AC084072.13| Mus musculus strain 129S6/SvEvTac clone rp22-511i2, complete sequence Length = 114579 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 atcagggagatatggctgggattgg 55 |||||||||||||||||||| |||| Sbjct: 56945 atcagggagatatggctgggtttgg 56969
>gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 map mi551, complete sequence Length = 96685 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 349 agatgatcaatgagaagccacaggtgatccaggagta 385 |||| ||||||||||||||||| ||||| || ||||| Sbjct: 9832 agatcatcaatgagaagccacaagtgattcaagagta 9796
>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete sequence Length = 115310 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 349 agatgatcaatgagaagccacaggtgatccaggagta 385 |||| ||||||||||||||||| ||||| || ||||| Sbjct: 105751 agatcatcaatgagaagccacaagtgattcaagagta 105715
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 gcccgccgctccggcgccgag 164 ||||||||||||||||||||| Sbjct: 874543 gcccgccgctccggcgccgag 874563
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 cggcgccgagatcgacaccaccaag 179 ||||||||||| ||||||||||||| Sbjct: 1865300 cggcgccgagagcgacaccaccaag 1865324
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 cggcgccgagatcgacaccaccaag 179 ||||||||||| ||||||||||||| Sbjct: 1983376 cggcgccgagagcgacaccaccaag 1983400
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 cggcgccgagatcgacaccaccaag 179 ||||||||||| ||||||||||||| Sbjct: 1072454 cggcgccgagagcgacaccaccaag 1072430
>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete sequence Length = 246587 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 atcagggagatatggctgggattgg 55 |||||||||||||||||||| |||| Sbjct: 22581 atcagggagatatggctgggtttgg 22605
>ref|XM_365829.1| Magnaporthe grisea 70-15 hypothetical protein (MG10049.4) partial mRNA Length = 654 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 cccgccgctccggcgccgag 164 |||||||||||||||||||| Sbjct: 395 cccgccgctccggcgccgag 376
>ref|XM_878913.1| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 3 (LOC532674), mRNA Length = 5573 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gctcaggcaggactgggagc 78 |||||||||||||||||||| Sbjct: 82 gctcaggcaggactgggagc 63
>ref|XM_611824.2| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 1 (LOC532674), mRNA Length = 5390 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gctcaggcaggactgggagc 78 |||||||||||||||||||| Sbjct: 82 gctcaggcaggactgggagc 63
>ref|XM_866654.1| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 2 (LOC532674), mRNA Length = 5453 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gctcaggcaggactgggagc 78 |||||||||||||||||||| Sbjct: 82 gctcaggcaggactgggagc 63
>emb|Z32679.1|CEC05B5 Caenorhabditis elegans Cosmid C05B5, complete sequence Length = 30320 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 523 aggctgttcctgttggttgatactgaat 550 ||||||||| |||||| ||||||||||| Sbjct: 16395 aggctgttcatgttggctgatactgaat 16368
>gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, complete sequence Length = 163123 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tgagacctgtagaaatcagg 36 |||||||||||||||||||| Sbjct: 66386 tgagacctgtagaaatcagg 66405
>gb|AC102781.5| Mus musculus chromosome 1, clone RP23-271G2, complete sequence Length = 198393 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tgagacctgtagaaatcagg 36 |||||||||||||||||||| Sbjct: 183163 tgagacctgtagaaatcagg 183144
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tgggagccgatagtggtgcg 91 |||||||||||||||||||| Sbjct: 1007031 tgggagccgatagtggtgcg 1007050
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cgccgagatcgacaccacca 177 |||||||||||||||||||| Sbjct: 136976 cgccgagatcgacaccacca 136957
>gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, complete sequence Length = 186963 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 tccctcaacaccaagcggct 241 |||||||||||||||||||| Sbjct: 44292 tccctcaacaccaagcggct 44273
>gb|DQ397548.1| Cenarchaeum symbiosum clone C04G08, complete sequence Length = 46706 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 ctgttcctgttggttgatac 545 |||||||||||||||||||| Sbjct: 45395 ctgttcctgttggttgatac 45414
>ref|NM_001025972.1| Caenorhabditis elegans C05B5.9 (C05B5.9) mRNA, complete cds Length = 598 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 523 aggctgttcctgttggttgatactgaat 550 ||||||||| |||||| ||||||||||| Sbjct: 269 aggctgttcatgttggctgatactgaat 242
>emb|AL929242.16| Mouse DNA sequence from clone RP23-78D16 on chromosome 2, complete sequence Length = 217352 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 gttgatactgaataaccatg 557 |||||||||||||||||||| Sbjct: 135391 gttgatactgaataaccatg 135410
>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4, cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ), MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY (mmcY) genes, complete cds; and unknown genes Length = 63734 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 cgctgcccgccgctccggcgccga 163 ||||||||||| |||||||||||| Sbjct: 7228 cgctgcccgcccctccggcgccga 7251
>gb|L05438.1|MUSIGFBP03 Mouse insulin-like growth factor binding protein 2 (IGFBP-2) gene, exon 3 Length = 425 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 tccctcaacaccaagcggct 241 |||||||||||||||||||| Sbjct: 140 tccctcaacaccaagcggct 121 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,759,602 Number of Sequences: 3902068 Number of extensions: 3759602 Number of successful extensions: 66706 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66306 Number of HSP's gapped (non-prelim): 388 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)