| Clone Name | baal35j18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | DND1_HUMAN (Q8IYX4) Dead end protein homolog 1 (RNA-binding moti... | 28 | 4.8 | 2 | FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger prote... | 28 | 4.8 | 3 | DND1_MOUSE (Q6VY05) Dead end protein homolog 1 (RNA-binding moti... | 28 | 8.1 |
|---|
>DND1_HUMAN (Q8IYX4) Dead end protein homolog 1 (RNA-binding motif,| single-stranded interacting protein 4) Length = 353 Score = 28.5 bits (62), Expect = 4.8 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +3 Query: 201 PPQGSEVFLGGLPRD 245 PP GSEVF+G LP+D Sbjct: 54 PPAGSEVFIGRLPQD 68
>FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger protein multitype| 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1) Length = 1004 Score = 28.5 bits (62), Expect = 4.8 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = -2 Query: 231 PPGIPPSPAGVVRGVPP 181 PPG PPSPA VPP Sbjct: 927 PPGPPPSPAAAPEAVPP 943
>DND1_MOUSE (Q6VY05) Dead end protein homolog 1 (RNA-binding motif,| single-stranded interacting protein 4) Length = 352 Score = 27.7 bits (60), Expect = 8.1 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +3 Query: 201 PPQGSEVFLGGLPRD 245 PP GSEV++G LP+D Sbjct: 54 PPSGSEVYIGRLPQD 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,757,924 Number of Sequences: 219361 Number of extensions: 333091 Number of successful extensions: 1938 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1743 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1934 length of database: 80,573,946 effective HSP length: 60 effective length of database: 67,412,286 effective search space used: 1617894864 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)