ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal35i07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4,... 194 2e-46
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
3ref|XM_473671.1| Oryza sativa (japonica cultivar-group), predic... 190 3e-45
4gb|DQ305408.1| Oryza sativa (japonica cultivar-group) putative g... 190 3e-45
5dbj|AK099753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 3e-45
6ref|NM_194213.1| Oryza sativa (japonica cultivar-group), mRNA 92 2e-15
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
8dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
9dbj|AK122009.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
11dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
12dbj|AK110224.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 8e-09
13gb|AC126786.22| Medicago truncatula clone mth2-8c2, complete seq... 58 3e-05
14gb|AC144482.11| Medicago truncatula clone mth2-10p1, complete se... 58 3e-05
15gb|AC011453.4| Homo sapiens chromosome 19 clone CTC-339O9, compl... 46 0.11
16gb|AC008753.9| Homo sapiens chromosome 19 clone CTD-3022G6, comp... 46 0.11
17gb|AC114002.4| Mus musculus BAC clone RP23-165H7 from 12, comple... 44 0.43
18gb|AC155819.2| Mus musculus BAC clone RP23-402F16 from chromosom... 44 0.43
19ref|NM_103438.1| Arabidopsis thaliana ATGLR3.3 AT1G42540 (ATGLR3... 40 6.7
20ref|XM_959436.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.7
21ref|XM_329359.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.7
22gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosom... 40 6.7
23ref|XM_989800.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.7
24gb|AY463692.1| Arabidopsis thaliana GLR3.3 (At1g42540) mRNA, com... 40 6.7
25gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complet... 40 6.7
26emb|AL121873.15|HSB362E11 Human DNA sequence from clone RP13-362... 40 6.7
27emb|AL133214.12| Human DNA sequence from clone RP11-163F8 on chr... 40 6.7
28gb|AE008774.1| Salmonella typhimurium LT2, section 78 of 220 of ... 40 6.7
29emb|AL627270.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 6.7
30gb|DP000033.1| Carollia perspicillata target 116 genomic scaffold 40 6.7
31gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, r... 40 6.7
32gb|AC025815.10|AC025815 Arabidopsis thaliana chromosome 1 BAC T8... 40 6.7
33gb|AC012078.3|AC012078 Homo sapiens BAC clone RP11-539O22 from Y... 40 6.7
34gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 6.7
35ref|XM_307840.2| Anopheles gambiae str. PEST ENSANGP00000018686 ... 40 6.7
36gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 40 6.7
37gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53... 40 6.7
38gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 6.7 
>emb|AL662957.2|OSJN00157 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013K16,
             complete sequence
          Length = 145739

 Score =  194 bits (98), Expect = 2e-46
 Identities = 173/198 (87%)
 Strand = Plus / Minus

                                                                         
Query: 80    aggagaggacacgagaagcaccctcggccgctttgtgatcatcatatggctcttcgtggt 139
             |||||||||||| || ||||| ||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 43222 aggagaggacaccaggagcactctcggccgcttcgtgatcatcatatggctgttcgtcgt 43163

                                                                         
Query: 140   cctcatcatccaatccagctacactgccagcttaacctccatactcaccgtgcagcagct 199
              || |||||||| || ||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 43162 tctgatcatccagtcgagctacactgccagcctgacctccatactcaccgtgcagcagct 43103

                                                                         
Query: 200   catatctccaatcacagggatcgatagcttgatcgccagtgacgagcccatcgggtttca 259
             ||  || || ||||| |||||||| ||||||||| |||| ||||  ||||||||||||||
Sbjct: 43102 cacgtcgccgatcaccgggatcgacagcttgatcaccagcgacgttcccatcgggtttca 43043

                               
Query: 260   agtcggctcctttgcgga 277
              ||||| ||||| |||||
Sbjct: 43042 ggtcgggtccttcgcgga 43025



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 142/175 (81%)
 Strand = Plus / Minus

                                                                         
Query: 315   aggcttaaagcgctcggttctccggacgagtataagcaagcgcttgagcttggcgctggc 374
             |||||||| |||||||| || || || ||||| ||| | || ||||| |||||| |  ||
Sbjct: 42987 aggcttaaggcgctcggctcaccagaggagtacaagaaggcacttgaccttggccccagc 42928

                                                                         
Query: 375   aacggaggcgtcactgccatcgtcgacgagcgtccctatgttgagatcttcttgctccag 434
             || ||||||||  | ||||||||||||||||| || ||  ||||| ||||||||   |||
Sbjct: 42927 aaaggaggcgttgcggccatcgtcgacgagcgcccgtacattgagctcttcttgtatcag 42868

                                                                    
Query: 435   catcccaaattcgccgtggtgggttcagagttcaccaaaagcggctggggcttcg 489
              | || || |||||||| ||||| || ||||||||||| ||||||||||||||||
Sbjct: 42867 aaccctaagttcgccgtcgtgggctccgagttcaccaagagcggctggggcttcg 42813
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  194 bits (98), Expect = 2e-46
 Identities = 173/198 (87%)
 Strand = Plus / Minus

                                                                            
Query: 80       aggagaggacacgagaagcaccctcggccgctttgtgatcatcatatggctcttcgtggt 139
                |||||||||||| || ||||| ||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 29540533 aggagaggacaccaggagcactctcggccgcttcgtgatcatcatatggctgttcgtcgt 29540474

                                                                            
Query: 140      cctcatcatccaatccagctacactgccagcttaacctccatactcaccgtgcagcagct 199
                 || |||||||| || ||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 29540473 tctgatcatccagtcgagctacactgccagcctgacctccatactcaccgtgcagcagct 29540414

                                                                            
Query: 200      catatctccaatcacagggatcgatagcttgatcgccagtgacgagcccatcgggtttca 259
                ||  || || ||||| |||||||| ||||||||| |||| ||||  ||||||||||||||
Sbjct: 29540413 cacgtcgccgatcaccgggatcgacagcttgatcaccagcgacgttcccatcgggtttca 29540354

                                  
Query: 260      agtcggctcctttgcgga 277
                 ||||| ||||| |||||
Sbjct: 29540353 ggtcgggtccttcgcgga 29540336



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 142/175 (81%)
 Strand = Plus / Minus

                                                                            
Query: 315      aggcttaaagcgctcggttctccggacgagtataagcaagcgcttgagcttggcgctggc 374
                |||||||| |||||||| || || || ||||| ||| | || ||||| |||||| |  ||
Sbjct: 29540298 aggcttaaggcgctcggctcaccagaggagtacaagaaggcacttgaccttggccccagc 29540239

                                                                            
Query: 375      aacggaggcgtcactgccatcgtcgacgagcgtccctatgttgagatcttcttgctccag 434
                || ||||||||  | ||||||||||||||||| || ||  ||||| ||||||||   |||
Sbjct: 29540238 aaaggaggcgttgcggccatcgtcgacgagcgcccgtacattgagctcttcttgtatcag 29540179

                                                                       
Query: 435      catcccaaattcgccgtggtgggttcagagttcaccaaaagcggctggggcttcg 489
                 | || || |||||||| ||||| || ||||||||||| ||||||||||||||||
Sbjct: 29540178 aaccctaagttcgccgtcgtgggctccgagttcaccaagagcggctggggcttcg 29540124
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>ref|XM_473671.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2817

 Score =  190 bits (96), Expect = 3e-45
 Identities = 171/196 (87%)
 Strand = Plus / Plus

                                                                        
Query: 82   gagaggacacgagaagcaccctcggccgctttgtgatcatcatatggctcttcgtggtcc 141
            |||||||||| || ||||| ||||||||||| ||||||||||||||||| ||||| || |
Sbjct: 1922 gagaggacaccaggagcactctcggccgcttcgtgatcatcatatggctgttcgtcgttc 1981

                                                                        
Query: 142  tcatcatccaatccagctacactgccagcttaacctccatactcaccgtgcagcagctca 201
            | |||||||| || ||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 1982 tgatcatccagtcgagctacactgccagcctgacctccatactcaccgtgcagcagctca 2041

                                                                        
Query: 202  tatctccaatcacagggatcgatagcttgatcgccagtgacgagcccatcgggtttcaag 261
              || || ||||| |||||||| ||||||||| |||| ||||  |||||||||||||| |
Sbjct: 2042 cgtcgccgatcaccgggatcgacagcttgatcaccagcgacgttcccatcgggtttcagg 2101

                            
Query: 262  tcggctcctttgcgga 277
            |||| ||||| |||||
Sbjct: 2102 tcgggtccttcgcgga 2117



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                        
Query: 315  aggcttaaagcgctcggttctccggacgagtataagcaagcgcttgagcttggcgctggc 374
            |||||||| |||||||| || || || ||||| ||| | || ||||| |||||| |  ||
Sbjct: 2155 aggcttaaggcgctcggctcaccagaggagtacaagaaggcacttgaccttggccccagc 2214

                                                                        
Query: 375  aacggaggcgtcactgccatcgtcgacgagcgtccctatgttgagatcttcttgctccag 434
            || ||||||||  | ||||||||||||||||| || ||  ||||| ||||||||   |||
Sbjct: 2215 aaaggaggcgttgcggccatcgtcgacgagcgcccgtacattgagctcttcttgtatcag 2274

                                                                        
Query: 435  catcccaaattcgccgtggtgggttcagagttcaccaaaagcggctggggcttcgcgttc 494
             | || || |||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 2275 aaccctaagttcgccgtcgtgggctccgagttcaccaagagcggctggggcttcgcgttc 2334

              
Query: 495  cc 496
            ||
Sbjct: 2335 cc 2336
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>gb|DQ305408.1| Oryza sativa (japonica cultivar-group) putative glutamate
            receptor-like channel 3.1 mRNA, complete cds
          Length = 2817

 Score =  190 bits (96), Expect = 3e-45
 Identities = 171/196 (87%)
 Strand = Plus / Plus

                                                                        
Query: 82   gagaggacacgagaagcaccctcggccgctttgtgatcatcatatggctcttcgtggtcc 141
            |||||||||| || ||||| ||||||||||| ||||||||||||||||| ||||| || |
Sbjct: 1922 gagaggacaccaggagcactctcggccgcttcgtgatcatcatatggctgttcgtcgttc 1981

                                                                        
Query: 142  tcatcatccaatccagctacactgccagcttaacctccatactcaccgtgcagcagctca 201
            | |||||||| || ||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 1982 tgatcatccagtcgagctacactgccagcctgacctccatactcaccgtgcagcagctca 2041

                                                                        
Query: 202  tatctccaatcacagggatcgatagcttgatcgccagtgacgagcccatcgggtttcaag 261
              || || ||||| |||||||| ||||||||| |||| ||||  |||||||||||||| |
Sbjct: 2042 cgtcgccgatcaccgggatcgacagcttgatcaccagcgacgttcccatcgggtttcagg 2101

                            
Query: 262  tcggctcctttgcgga 277
            |||| ||||| |||||
Sbjct: 2102 tcgggtccttcgcgga 2117



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                        
Query: 315  aggcttaaagcgctcggttctccggacgagtataagcaagcgcttgagcttggcgctggc 374
            |||||||| |||||||| || || || ||||| ||| | || ||||| |||||| |  ||
Sbjct: 2155 aggcttaaggcgctcggctcaccagaggagtacaagaaggcacttgaccttggccccagc 2214

                                                                        
Query: 375  aacggaggcgtcactgccatcgtcgacgagcgtccctatgttgagatcttcttgctccag 434
            || ||||||||  | ||||||||||||||||| || ||  ||||| ||||||||   |||
Sbjct: 2215 aaaggaggcgttgcggccatcgtcgacgagcgcccgtacattgagctcttcttgtatcag 2274

                                                                        
Query: 435  catcccaaattcgccgtggtgggttcagagttcaccaaaagcggctggggcttcgcgttc 494
             | || || |||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 2275 aaccctaagttcgccgtcgtgggctccgagttcaccaagagcggctggggcttcgcgttc 2334

              
Query: 495  cc 496
            ||
Sbjct: 2335 cc 2336
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>dbj|AK099753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092N19, full
            insert sequence
          Length = 3219

 Score =  190 bits (96), Expect = 3e-45
 Identities = 171/196 (87%)
 Strand = Plus / Plus

                                                                        
Query: 82   gagaggacacgagaagcaccctcggccgctttgtgatcatcatatggctcttcgtggtcc 141
            |||||||||| || ||||| ||||||||||| ||||||||||||||||| ||||| || |
Sbjct: 2136 gagaggacaccaggagcactctcggccgcttcgtgatcatcatatggctgttcgtcgttc 2195

                                                                        
Query: 142  tcatcatccaatccagctacactgccagcttaacctccatactcaccgtgcagcagctca 201
            | |||||||| || ||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 2196 tgatcatccagtcgagctacactgccagcctgacctccatactcaccgtgcagcagctca 2255

                                                                        
Query: 202  tatctccaatcacagggatcgatagcttgatcgccagtgacgagcccatcgggtttcaag 261
              || || ||||| |||||||| ||||||||| |||| ||||  |||||||||||||| |
Sbjct: 2256 cgtcgccgatcaccgggatcgacagcttgatcaccagcgacgttcccatcgggtttcagg 2315

                            
Query: 262  tcggctcctttgcgga 277
            |||| ||||| |||||
Sbjct: 2316 tcgggtccttcgcgga 2331



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                        
Query: 315  aggcttaaagcgctcggttctccggacgagtataagcaagcgcttgagcttggcgctggc 374
            |||||||| |||||||| || || || ||||| ||| | || ||||| |||||| |  ||
Sbjct: 2369 aggcttaaggcgctcggctcaccagaggagtacaagaaggcacttgaccttggccccagc 2428

                                                                        
Query: 375  aacggaggcgtcactgccatcgtcgacgagcgtccctatgttgagatcttcttgctccag 434
            || ||||||||  | ||||||||||||||||| || ||  ||||| ||||||||   |||
Sbjct: 2429 aaaggaggcgttgcggccatcgtcgacgagcgcccgtacattgagctcttcttgtatcag 2488

                                                                        
Query: 435  catcccaaattcgccgtggtgggttcagagttcaccaaaagcggctggggcttcgcgttc 494
             | || || |||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 2489 aaccctaagttcgccgtcgtgggctccgagttcaccaagagcggctggggcttcgcgttc 2548

              
Query: 495  cc 496
            ||
Sbjct: 2549 cc 2550
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>ref|NM_194213.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2868

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                        
Query: 118  tcatcatatggctcttcgtggtcctcatcatccaatccagctacactgccagcttaacct 177
            ||||||| ||||||||||| || ||||||||| | ||||||||||| |||||| | ||||
Sbjct: 1964 tcatcatctggctcttcgtcgtgctcatcatcaactccagctacaccgccagcctcacct 2023

                                  
Query: 178  ccatactcaccgtgcagcagct 199
            |||| |||||||||||||||||
Sbjct: 2024 ccatcctcaccgtgcagcagct 2045
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                          
Query: 118    tcatcatatggctcttcgtggtcctcatcatccaatccagctacactgccagcttaacct 177
              ||||||| ||||||||||| || ||||||||| | ||||||||||| |||||| | ||||
Sbjct: 194179 tcatcatctggctcttcgtcgtgctcatcatcaactccagctacaccgccagcctcacct 194238

                                    
Query: 178    ccatactcaccgtgcagcagct 199
              |||| |||||||||||||||||
Sbjct: 194239 ccatcctcaccgtgcagcagct 194260
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>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446F04
          Length = 175390

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                         
Query: 118   tcatcatatggctcttcgtggtcctcatcatccaatccagctacactgccagcttaacct 177
             ||||||| ||||||||||| || ||||||||| | ||||||||||| |||||| | ||||
Sbjct: 29043 tcatcatctggctcttcgtcgtgctcatcatcaactccagctacaccgccagcctcacct 29102

                                   
Query: 178   ccatactcaccgtgcagcagct 199
             |||| |||||||||||||||||
Sbjct: 29103 ccatcctcaccgtgcagcagct 29124
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>dbj|AK122009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111F13, full
            insert sequence
          Length = 3648

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                        
Query: 118  tcatcatatggctcttcgtggtcctcatcatccaatccagctacactgccagcttaacct 177
            ||||||| ||||||||||| || ||||||||| | ||||||||||| |||||| | ||||
Sbjct: 2483 tcatcatctggctcttcgtcgtgctcatcatcaactccagctacaccgccagcctcacct 2542

                                  
Query: 178  ccatactcaccgtgcagcagct 199
            |||| |||||||||||||||||
Sbjct: 2543 ccatcctcaccgtgcagcagct 2564
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                            
Query: 130      tcttcgtggtcctcatcatccaatccagctacactgccagcttaacctccatactcaccg 189
                ||||||| ||||||||| |||| ||||||||||| |||||| | |||||||| |||||||
Sbjct: 15706981 tcttcgtcgtcctcatcctccagtccagctacaccgccagcctcacctccatgctcaccg 15707040

                   
Query: 190      tgc 192
                |||
Sbjct: 15707041 tgc 15707043
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>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0016E03
          Length = 152934

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 130   tcttcgtggtcctcatcatccaatccagctacactgccagcttaacctccatactcaccg 189
             ||||||| ||||||||| |||| ||||||||||| |||||| | |||||||| |||||||
Sbjct: 98288 tcttcgtcgtcctcatcctccagtccagctacaccgccagcctcacctccatgctcaccg 98347

                
Query: 190   tgc 192
             |||
Sbjct: 98348 tgc 98350
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>dbj|AK110224.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-E05, full
            insert sequence
          Length = 3184

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                        
Query: 130  tcttcgtggtcctcatcatccaatccagctacactgccagcttaacctccatactcaccg 189
            ||||||| ||||||||| |||| ||||||||||| |||||| | |||||||| |||||||
Sbjct: 1999 tcttcgtcgtcctcatcctccagtccagctacaccgccagcctcacctccatgctcaccg 2058

               
Query: 190  tgc 192
            |||
Sbjct: 2059 tgc 2061
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>gb|AC126786.22| Medicago truncatula clone mth2-8c2, complete sequence
          Length = 115134

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 153   tccagctacactgccagcttaacctccatactcaccgtgcagcag 197
             |||||||||||||| || ||||| ||||||||||| |||||||||
Sbjct: 89958 tccagctacactgctagtttaacatccatactcacggtgcagcag 89914
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>gb|AC144482.11| Medicago truncatula clone mth2-10p1, complete sequence
          Length = 121112

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 153   tccagctacactgccagcttaacctccatactcaccgtgcagcag 197
             |||||||||||||| || ||||| ||||||||||| |||||||||
Sbjct: 98415 tccagctacactgctagtttaacatccatactcacggtgcagcag 98371
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>gb|AC011453.4| Homo sapiens chromosome 19 clone CTC-339O9, complete sequence
          Length = 128736

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 416   tgagatcttcttgctccagcatc 438
             |||||||||||||||||||||||
Sbjct: 14437 tgagatcttcttgctccagcatc 14459



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 415   ttgagatcttcttgctccagca 436
             ||||||||||||||||||||||
Sbjct: 77167 ttgagatcttcttgctccagca 77188



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 415   ttgagatcttcttgctccagca 436
             ||||||||||||||||||||||
Sbjct: 68115 ttgagatcttcttgctccagca 68136



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 415  ttgagatcttcttgctccagca 436
            ||||||||||||||||||||||
Sbjct: 7416 ttgagatcttcttgctccagca 7437



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 416   tgagatcttcttgctccagca 436
             |||||||||||||||||||||
Sbjct: 79179 tgagatcttcttgctccagca 79199



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 416   tgagatcttcttgctccagca 436
             |||||||||||||||||||||
Sbjct: 74768 tgagatcttcttgctccagca 74788



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 416   tgagatcttcttgctccagca 436
             |||||||||||||||||||||
Sbjct: 67263 tgagatcttcttgctccagca 67283



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 416   tgagatcttcttgctccagca 436
             |||||||||||||||||||||
Sbjct: 40206 tgagatcttcttgctccagca 40226



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 416  tgagatcttcttgctccagca 436
            |||||||||||||||||||||
Sbjct: 4515 tgagatcttcttgctccagca 4535
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>gb|AC008753.9| Homo sapiens chromosome 19 clone CTD-3022G6, complete sequence
          Length = 147330

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 416   tgagatcttcttgctccagcatc 438
             |||||||||||||||||||||||
Sbjct: 19951 tgagatcttcttgctccagcatc 19929



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 415   ttgagatcttcttgctccagca 436
             ||||||||||||||||||||||
Sbjct: 26971 ttgagatcttcttgctccagca 26950



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 416   tgagatcttcttgctccagca 436
             |||||||||||||||||||||
Sbjct: 29873 tgagatcttcttgctccagca 29853
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>gb|AC114002.4| Mus musculus BAC clone RP23-165H7 from 12, complete sequence
          Length = 200112

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 420    atcttcttgctccagcatcccaaatt 445
              |||||||||| |||||||||||||||
Sbjct: 127347 atcttcttgccccagcatcccaaatt 127322
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>gb|AC155819.2| Mus musculus BAC clone RP23-402F16 from chromosome 12, complete sequence
          Length = 201181

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 420    atcttcttgctccagcatcccaaatt 445
              |||||||||| |||||||||||||||
Sbjct: 169434 atcttcttgccccagcatcccaaatt 169459
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>ref|NM_103438.1| Arabidopsis thaliana ATGLR3.3 AT1G42540 (ATGLR3.3) mRNA, complete cds
          Length = 2802

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 461  agagttcaccaaaagcggctgggg 484
            ||||||||||||||| ||||||||
Sbjct: 2295 agagttcaccaaaagtggctgggg 2318
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>ref|XM_959436.1| Neurospora crassa OR74A hypothetical protein (NCU02170.1) partial
            mRNA
          Length = 2178

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  tggcgctggcaacggaggcg 384
            ||||||||||||||||||||
Sbjct: 1584 tggcgctggcaacggaggcg 1603
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>ref|XM_329359.1| Neurospora crassa OR74A hypothetical protein (NCU02170.1) partial
            mRNA
          Length = 2178

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  tggcgctggcaacggaggcg 384
            ||||||||||||||||||||
Sbjct: 1584 tggcgctggcaacggaggcg 1603
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>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence
          Length = 209986

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    gcaccctcggccgctttgtg 116
             ||||||||||||||||||||
Sbjct: 43917 gcaccctcggccgctttgtg 43898
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>ref|XM_989800.1| PREDICTED: Mus musculus hypothetical protein LOC667323 (LOC667323),
           mRNA
          Length = 945

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 97  gcaccctcggccgctttgtg 116
           ||||||||||||||||||||
Sbjct: 211 gcaccctcggccgctttgtg 192
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>gb|AY463692.1| Arabidopsis thaliana GLR3.3 (At1g42540) mRNA, complete cds
          Length = 2802

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 461  agagttcaccaaaagcggctgggg 484
            ||||||||||||||| ||||||||
Sbjct: 2295 agagttcaccaaaagtggctgggg 2318
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>gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complete sequence
          Length = 193861

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     gcaccctcggccgctttgtg 116
              ||||||||||||||||||||
Sbjct: 161323 gcaccctcggccgctttgtg 161304
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>emb|AL121873.15|HSB362E11 Human DNA sequence from clone RP13-362E11 on chromosome X Contains an
             ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1)
             pseudogene, complete sequence
          Length = 212280

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     gtcttaacctttctacatac 20
             ||||||||||||||||||||
Sbjct: 39395 gtcttaacctttctacatac 39376
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>emb|AL133214.12| Human DNA sequence from clone RP11-163F8 on chromosome 9p21.2-23 Contains
              the 3' end of a novel gene (FLJ20276), the 5' end of the
              SH3GL2 gene for SH3-domain GRB2-like 2 (CNSA2, SH3P4,
              EEN-B1, SH3D2A), a poly(A)-binding protein pseudogene and a
              CpG Island, complete sequence
          Length = 154621

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      cttaacctttctacatactg 22
              ||||||||||||||||||||
Sbjct: 101062 cttaacctttctacatactg 101043
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>gb|AE008774.1| Salmonella typhimurium LT2, section 78 of 220 of the complete genome
          Length = 20168

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   tggcgctggcaacggaggcg 384
             ||||||||||||||||||||
Sbjct: 14427 tggcgctggcaacggaggcg 14408
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>emb|AL627270.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 6/20
          Length = 266050

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   tggcgctggcaacggaggcg 384
             ||||||||||||||||||||
Sbjct: 28808 tggcgctggcaacggaggcg 28827
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>gb|DP000033.1| Carollia perspicillata target 116 genomic scaffold
          Length = 347743

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 413  tgttgagatcttcttgctcc 432
            ||||||||||||||||||||
Sbjct: 7117 tgttgagatcttcttgctcc 7136
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>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
              BACR21J17, complete sequence
          Length = 174974

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 419    gatcttcttgctccagcatc 438
              ||||||||||||||||||||
Sbjct: 150975 gatcttcttgctccagcatc 150956
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>gb|AC025815.10|AC025815 Arabidopsis thaliana chromosome 1 BAC T8D8 genomic sequence, complete
             sequence
          Length = 55021

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 461   agagttcaccaaaagcggctgggg 484
             ||||||||||||||| ||||||||
Sbjct: 45002 agagttcaccaaaagtggctgggg 45025
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>gb|AC012078.3|AC012078 Homo sapiens BAC clone RP11-539O22 from Y, complete sequence
          Length = 176872

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     gtcttaacctttctacatac 20
             ||||||||||||||||||||
Sbjct: 85703 gtcttaacctttctacatac 85684
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 365     tggcgctggcaacggaggcg 384
               ||||||||||||||||||||
Sbjct: 1272076 tggcgctggcaacggaggcg 1272095
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>ref|XM_307840.2| Anopheles gambiae str. PEST ENSANGP00000018686
           (ENSANGG00000016197), mRNA
          Length = 369

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  agcaccctcggccgctttgtgatc 119
           ||||||||||||||| ||||||||
Sbjct: 225 agcaccctcggccgccttgtgatc 202
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 365     tggcgctggcaacggaggcg 384
               ||||||||||||||||||||
Sbjct: 1645374 tggcgctggcaacggaggcg 1645355
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>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete
             sequence
          Length = 263306

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   gatcttcttgctccagcatc 438
             ||||||||||||||||||||
Sbjct: 42815 gatcttcttgctccagcatc 42796
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 365     tggcgctggcaacggaggcg 384
               ||||||||||||||||||||
Sbjct: 1787830 tggcgctggcaacggaggcg 1787811


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,110,926
Number of Sequences: 3902068
Number of extensions: 3110926
Number of successful extensions: 54194
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54008
Number of HSP's gapped (non-prelim): 181
length of query: 496
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 474
effective length of database: 17,147,199,772
effective search space: 8127772691928
effective search space used: 8127772691928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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