ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal35h15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1B2_DAUCA (P37707) B2 protein 224 9e-59
2Y3536_METJA (Q60257) UPF0310 protein MJECL36 33 0.62
3Y1033_PYRHO (O58764) UPF0310 protein PH1033 30 4.0
4Y2356_ARCFU (O30314) UPF0310 protein AF2356 30 4.0
5Y875_PYRAB (Q9V0B5) UPF0310 protein PYRAB08750 29 9.0

>B2_DAUCA (P37707) B2 protein|
          Length = 207

 Score =  224 bits (572), Expect = 9e-59
 Identities = 106/128 (82%), Positives = 115/128 (89%)
 Frame = +2

Query: 137 GDNNHGAASEKRFKTLPASEALPRNEPIGGYIFVCNNDTMEENLKRQLFGLPSRYRDSVR 316
           G+N +G   EKRFKTLP +E+LPRNE +GGYIFVCNNDTM+ENLKRQLFGLP RYRDSVR
Sbjct: 49  GENKNGV--EKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVR 106

Query: 317 AIRPGLPLFLYNYSTHQLHGIFEAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKIC 496
           AI PGLPLFLYNYSTHQLHG+FEAASFGG NIDP AWEDKK  GESRFPAQVRV TRKIC
Sbjct: 107 AITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKIC 166

Query: 497 DPLEEDAF 520
           +PLEED+F
Sbjct: 167 EPLEEDSF 174



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>Y3536_METJA (Q60257) UPF0310 protein MJECL36|
          Length = 144

 Score = 32.7 bits (73), Expect = 0.62
 Identities = 18/99 (18%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
 Frame = +2

Query: 227 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY-------NYSTHQLHGIFE 385
           ++ + N D  +   +++++G+  RY++++  ++ G  L +Y       +Y    + G++E
Sbjct: 4   WLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYE 63

Query: 386 AASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICDP 502
             S    +     ++    N   +FP +V++   K+ +P
Sbjct: 64  VVSEVYKD-SSKIFKPTPRNPNEKFPYRVKLKEIKVFEP 101



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>Y1033_PYRHO (O58764) UPF0310 protein PH1033|
          Length = 145

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/98 (20%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
 Frame = +2

Query: 227 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY---------NYSTHQLHGI 379
           +I + N +  E   +  ++G+P ++++++  ++PG  L +Y         N    ++ GI
Sbjct: 4   WICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGI 63

Query: 380 FEAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKI 493
           +E  S     +D +        G+  +P +V++   KI
Sbjct: 64  YEVTS--EPYVDFSRIFKPHRGGKETYPYRVKIKPIKI 99



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>Y2356_ARCFU (O30314) UPF0310 protein AF2356|
          Length = 147

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/103 (19%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
 Frame = +2

Query: 227 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY--------NYSTHQLHGIF 382
           ++ + N D      ++ ++G+P R+++++  ++ G  L +Y             ++  ++
Sbjct: 4   WLCITNEDNWRVIKEKNIWGVPERHKNTIAKVKKGDKLLIYIKQENVNGEVKPSRIVAVY 63

Query: 383 EAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICD-PLE 508
           E AS    +     ++  K  G   FP ++++   KI D P+E
Sbjct: 64  ETASEVYRD-SSRIFKSPKGMGNETFPLRIKLKPVKIFDRPIE 105



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>Y875_PYRAB (Q9V0B5) UPF0310 protein PYRAB08750|
          Length = 142

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
 Frame = +2

Query: 227 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLYNYSTHQLHGIFEAASFGGA 406
           ++ + N D  +   ++ ++G+P R+ ++++ ++PG  L  Y     +   + E    G  
Sbjct: 4   WLCITNRDNWKVVKEKNVWGVPRRHENTMKRVKPGDKLVFYVKQESRKGEVLEPMIVGIF 63

Query: 407 NIDPAAWEDKKCNGESRFPAQ---VRVATRKI 493
            +    + D     +S  P +   +RV  R I
Sbjct: 64  EVVSEPYSDSTKIFKSHTPGETYPIRVKIRPI 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,600,946
Number of Sequences: 219361
Number of extensions: 809858
Number of successful extensions: 1706
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3985467738
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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