>ref|XM_479215.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1349

 Score =  125 bits (63), Expect = 2e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                       
Query: 140 gcgagctgggattccgagaagtccccgtacgagacgctcgagctggaaagggatgccgac 199
           |||||||||||||| ||||| || ||||||||||||||||||||||| |||||||| || 
Sbjct: 268 gcgagctgggattcggagaaatcaccgtacgagacgctcgagctggacagggatgcagat 327

                                                                  
Query: 200 gatgagaccataaaggtcgcgtacaggagattggccaagttctatcaccctgatg 254
           || ||||| ||||||   || |||||| |||||||||||||||||||||||||||
Sbjct: 328 gaggagacaataaagacggcatacaggcgattggccaagttctatcaccctgatg 382



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                            
Query: 13  gtcgccggcgatgagcagcctccgagccatctccgccctcctccacacc 61
           |||||||||||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 60  gtcgccggcgatgagcggcctccgagccatctccaccctactccacacc 108

>dbj|AK100600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107C09, full
           insert sequence
          Length = 1350

 Score =  125 bits (63), Expect = 2e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                       
Query: 140 gcgagctgggattccgagaagtccccgtacgagacgctcgagctggaaagggatgccgac 199
           |||||||||||||| ||||| || ||||||||||||||||||||||| |||||||| || 
Sbjct: 269 gcgagctgggattcggagaaatcaccgtacgagacgctcgagctggacagggatgcagat 328

                                                                  
Query: 200 gatgagaccataaaggtcgcgtacaggagattggccaagttctatcaccctgatg 254
           || ||||| ||||||   || |||||| |||||||||||||||||||||||||||
Sbjct: 329 gaggagacaataaagacggcatacaggcgattggccaagttctatcaccctgatg 383



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                            
Query: 13  gtcgccggcgatgagcagcctccgagccatctccgccctcctccacacc 61
           |||||||||||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 61  gtcgccggcgatgagcggcctccgagccatctccaccctactccacacc 109

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                            
Query: 179      gagctggaaagggatgccgacgatgagaccataaaggtcgcgtacaggagattggccaag 238
                |||||||| |||||||| || || ||||| ||||||   || |||||| |||||||||||
Sbjct: 25887723 gagctggacagggatgcagatgaggagacaataaagacggcatacaggcgattggccaag 25887782

                                  
Query: 239      ttctatcaccctgatggt 256
                ||||||||||||||||||
Sbjct: 25887783 ttctatcaccctgatggt 25887800



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                 
Query: 13       gtcgccggcgatgagcagcctccgagccatctccgccctcctccacacc 61
                |||||||||||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 25887125 gtcgccggcgatgagcggcctccgagccatctccaccctactccacacc 25887173



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 140      gcgagctgggattccgagaagtccccgtacgagacgctcg 179
                |||||||||||||| ||||| || ||||||||||||||||
Sbjct: 25887333 gcgagctgggattcggagaaatcaccgtacgagacgctcg 25887372

>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1339_F05
          Length = 132708

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                         
Query: 179   gagctggaaagggatgccgacgatgagaccataaaggtcgcgtacaggagattggccaag 238
             |||||||| |||||||| || || ||||| ||||||   || |||||| |||||||||||
Sbjct: 58171 gagctggacagggatgcagatgaggagacaataaagacggcatacaggcgattggccaag 58230

                               
Query: 239   ttctatcaccctgatggt 256
             ||||||||||||||||||
Sbjct: 58231 ttctatcaccctgatggt 58248



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                              
Query: 13    gtcgccggcgatgagcagcctccgagccatctccgccctcctccacacc 61
             |||||||||||||||| ||||||||||||||||| |||| |||||||||
Sbjct: 57573 gtcgccggcgatgagcggcctccgagccatctccaccctactccacacc 57621



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 140   gcgagctgggattccgagaagtccccgtacgagacgctcg 179
             |||||||||||||| ||||| || ||||||||||||||||
Sbjct: 57781 gcgagctgggattcggagaaatcaccgtacgagacgctcg 57820

>gb|AY105288.1| Zea mays PCO140798 mRNA sequence
          Length = 718

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 233 gccaagttctatcaccctgatgg 255
           |||||||||||||||||||||||
Sbjct: 69  gccaagttctatcaccctgatgg 91

>emb|AL159979.18| Human DNA sequence from clone RP11-547P7 on chromosome 13, complete
             sequence
          Length = 54625

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 256   tctgtttctttaccttctatgc 277
             ||||||||||||||||||||||
Sbjct: 53328 tctgtttctttaccttctatgc 53349

>gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, complete sequence
          Length = 206094

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   cattcacaaagaagtaagatg 297
             |||||||||||||||||||||
Sbjct: 35778 cattcacaaagaagtaagatg 35758

>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11,
              DP09G08, DP35C12 of chromosome 5  of Podospora anserina
          Length = 322194

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 176    ctcgagctggaaagggatgcc 196
              |||||||||||||||||||||
Sbjct: 145155 ctcgagctggaaagggatgcc 145135

>gb|BT017156.1| Zea mays clone EL01N0367F12.c mRNA sequence
          Length = 992

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 atgccgacgatgagaccata 211
           ||||||||||||||||||||
Sbjct: 557 atgccgacgatgagaccata 538

>gb|BT017861.1| Zea mays clone EL01N0511G07.c mRNA sequence
          Length = 1094

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 atgccgacgatgagaccata 211
           ||||||||||||||||||||
Sbjct: 641 atgccgacgatgagaccata 622

>gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, complete sequence
          Length = 173767

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   tgtactggtgatatcatttt 495
             ||||||||||||||||||||
Sbjct: 25251 tgtactggtgatatcatttt 25232

>gb|AC122325.4| Mus musculus BAC clone RP23-334H17 from chromosome 5, complete sequence
          Length = 184869

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   tctatgcattcacaaagaag 290
             ||||||||||||||||||||
Sbjct: 19292 tctatgcattcacaaagaag 19273

>emb|CR956360.10| Pig DNA sequence from clone CH242-245E12 on chromosome 7, complete
             sequence
          Length = 185507

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   tatgctgtggatgcagtcat 442
             ||||||||||||||||||||
Sbjct: 68059 tatgctgtggatgcagtcat 68078

>gb|AC000119.1| Homo sapiens BAC clone CTB-104I4 from 7, complete sequence
          Length = 191191

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   ttctatgcattcacaaagaa 289
             ||||||||||||||||||||
Sbjct: 41789 ttctatgcattcacaaagaa 41770

>emb|AL034547.14|HS1098F8 Human DNA sequence from clone RP5-1098F8 on chromosome 20p11.23-12.3
             Contains an STS and GSSs, complete sequence
          Length = 114396

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   cctgatggtctgtttcttta 267
             ||||||||||||||||||||
Sbjct: 64332 cctgatggtctgtttcttta 64313

>ref|XM_965706.1| PREDICTED: Tribolium castaneum similar to CG14991-PA, isoform A
           (LOC659396), mRNA
          Length = 2127

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  ctccgccctcctccacaccg 62
           ||||||||||||||||||||
Sbjct: 608 ctccgccctcctccacaccg 627

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 514      tactactgtacatatcaaac 533
                ||||||||||||||||||||
Sbjct: 26627896 tactactgtacatatcaaac 26627915

>gb|AC023347.8| Homo sapiens BAC clone RP11-507H23 from 2, complete sequence
          Length = 174655

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   ctcagtaagtttaattactt 417
             ||||||||||||||||||||
Sbjct: 16718 ctcagtaagtttaattactt 16699

>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0519E06
          Length = 170634

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    tactactgtacatatcaaac 533
              ||||||||||||||||||||
Sbjct: 170277 tactactgtacatatcaaac 170296

>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_F09
          Length = 139371

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   tactactgtacatatcaaac 533
             ||||||||||||||||||||
Sbjct: 62057 tactactgtacatatcaaac 62076

>emb|BX511214.8| Zebrafish DNA sequence from clone DKEY-191C11, complete sequence
          Length = 211331

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   gtatatgcttgtttttgaat 320
             ||||||||||||||||||||
Sbjct: 71296 gtatatgcttgtttttgaat 71277

>dbj|BS000206.1| Pan troglodytes chromosome 22 clone:RP43-160M11, map 22, complete
              sequences
          Length = 181571

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 521    gtacatatcaaacttaaatatgct 544
              |||||||||||||||||| |||||
Sbjct: 133964 gtacatatcaaacttaaaaatgct 133987

>gb|AY919674.1| Homo sapiens amyloid beta (A4) precursor protein (protease nexin-II,
             Alzheimer disease) (APP) gene, complete cds
          Length = 293960

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 521   gtacatatcaaacttaaatatgct 544
             |||||||||||||||||| |||||
Sbjct: 56333 gtacatatcaaacttaaaaatgct 56310

>dbj|AP001695.1| Homo sapiens genomic DNA, chromosome 21q, section 39/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 521    gtacatatcaaacttaaatatgct 544
              |||||||||||||||||| |||||
Sbjct: 184268 gtacatatcaaacttaaaaatgct 184291

>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    tactactgtacatatcaaac 533
              ||||||||||||||||||||
Sbjct: 332710 tactactgtacatatcaaac 332729



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 514    tactactgtacatatcaaac 533
              ||||||||||||||||||||
Sbjct: 249938 tactactgtacatatcaaac 249919

>emb|CT027991.8| Mouse DNA sequence from clone RP23-418N2 on chromosome 16, complete
             sequence
          Length = 186296

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 522   tacatatcaaacttaaatatgctg 545
             ||||||| ||||||||||||||||
Sbjct: 94896 tacatattaaacttaaatatgctg 94919

>emb|AL772333.5| Mouse DNA sequence from clone RP23-305E1 on chromosome 1, complete
             sequence
          Length = 142174

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 458   gaattgcaccatccaccatg 477
             ||||||||||||||||||||
Sbjct: 98515 gaattgcaccatccaccatg 98534

>emb|AL772236.11| Mouse DNA sequence from clone RP23-98F14 on chromosome 4, complete
              sequence
          Length = 207430

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    agtaagatgtgggtatatgc 308
              ||||||||||||||||||||
Sbjct: 133280 agtaagatgtgggtatatgc 133261

>gb|AC121834.4| Mus musculus BAC clone RP24-72F20 from chromosome 5, complete sequence
          Length = 226382

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    tctatgcattcacaaagaag 290
              ||||||||||||||||||||
Sbjct: 146683 tctatgcattcacaaagaag 146664

>gb|M95063.1|MZEORFD Zea mays putative proteolipid subunit of vacuolar H+ ATPase mRNA,
           partial cds
          Length = 202

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 atgccgacgatgagaccata 211
           ||||||||||||||||||||
Sbjct: 137 atgccgacgatgagaccata 118

>dbj|AP000143.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone
             B2291C14-R44F3, segment 8/10, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 521   gtacatatcaaacttaaatatgct 544
             |||||||||||||||||| |||||
Sbjct: 22564 gtacatatcaaacttaaaaatgct 22587

>dbj|D87675.1| Homo sapiens DNA for amyloid precursor protein, complete cds
          Length = 301692

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 521   gtacatatcaaacttaaatatgct 544
             |||||||||||||||||| |||||
Sbjct: 60048 gtacatatcaaacttaaaaatgct 60025

>dbj|AP001439.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2,, clone:S459,
             LL56-APP region, complete sequence
          Length = 83661

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 521   gtacatatcaaacttaaatatgct 544
             |||||||||||||||||| |||||
Sbjct: 20112 gtacatatcaaacttaaaaatgct 20135

>dbj|AP000090.1| Homo sapiens genomic DNA of 21q22.1, APP related, B2291C14-T1533
             region, segment 7/7
          Length = 121597

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 521   gtacatatcaaacttaaatatgct 544
             |||||||||||||||||| |||||
Sbjct: 61550 gtacatatcaaacttaaaaatgct 61573


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,628,353
Number of Sequences: 3902068
Number of extensions: 4628353
Number of successful extensions: 88654
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88502
Number of HSP's gapped (non-prelim): 152
length of query: 557
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 534
effective length of database: 17,143,297,704
effective search space: 9154520973936
effective search space used: 9154520973936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)