| Clone Name | baal35h01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence Length = 192473 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 cctcttctttctgcttctctt 469 ||||||||||||||||||||| Sbjct: 48353 cctcttctttctgcttctctt 48333
>gb|AC132092.3| Mus musculus BAC clone RP24-470A15 from chromosome 16, complete sequence Length = 174558 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tcctcttctttctgcttctct 468 ||||||||||||||||||||| Sbjct: 156218 tcctcttctttctgcttctct 156198
>gb|AC129186.3| Mus musculus BAC clone RP23-415I21 from chromosome 16, complete sequence Length = 209432 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tcctcttctttctgcttctct 468 ||||||||||||||||||||| Sbjct: 10799 tcctcttctttctgcttctct 10779
>emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chromosome 10 Contains the HHEX gene for hematopoietically expressed homeobox, the 5' end of the gene for SEC15 (S. cerevisiae)-like (SEC15L), a eukaryotic translation initiation factor 2 subunit 2 (eIF-2-beta) pseudogene and four CpG islands, complete sequence Length = 190144 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 gcttgagtgtcttcccatgtg 430 ||||||||||||||||||||| Sbjct: 81287 gcttgagtgtcttcccatgtg 81307
>emb|AL157402.19| Human DNA sequence from clone RP11-553K8 on chromosome 1q31.2-31.3 Contains the ATP6V1G3 gene for H+ transporting ATPase lysosomal 13kDa V1 subunit G isoform 3, two novel genes, a prostatic binding protein (PBP) pseudogene and the 5' end of the PTPRC gene for receptor type protein tyrosine phosphatase C, complete sequence Length = 210331 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ggccgaatttgtttcttcag 494 |||||||||||||||||||| Sbjct: 34809 ggccgaatttgtttcttcag 34790
>gb|AC087560.26| Mus musculus strain C57BL/6J clone rp23-448g13 map X, complete sequence Length = 203953 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 452 cttctttctgcttctcttgtcatg 475 |||||||||||||||||| ||||| Sbjct: 164381 cttctttctgcttctcttttcatg 164358
>gb|AC157919.5| Mus musculus chromosome 3, clone RP23-131B7, complete sequence Length = 190453 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 gatcctcttctttctgcttctctt 469 ||||||||||||||||| |||||| Sbjct: 46731 gatcctcttctttctgcctctctt 46708
>gb|AC154118.6| Mus musculus chromosome 19, clone RP24-340C10, complete sequence Length = 141422 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 gatcctcttctttctgcttc 465 |||||||||||||||||||| Sbjct: 14254 gatcctcttctttctgcttc 14235
>gb|AC121099.8| Mus musculus chromosome 3, clone RP24-501F21, complete sequence Length = 157318 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gatcctcttctttctgcttctctt 469 ||||||||||||||||| |||||| Sbjct: 16017 gatcctcttctttctgcctctctt 16040
>dbj|AK048074.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130033C08 product:unclassifiable, full insert sequence Length = 3730 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 acggccaaggttggtgattc 261 |||||||||||||||||||| Sbjct: 3514 acggccaaggttggtgattc 3495
>emb|AL831771.5| Mouse DNA sequence from clone RP23-336F13 on chromosome X, complete sequence Length = 207974 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 caattgattaagactttgaa 406 |||||||||||||||||||| Sbjct: 23458 caattgattaagactttgaa 23439
>emb|AL645963.9| Mouse DNA sequence from clone RP23-76C16 on chromosome 11, complete sequence Length = 176154 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 acggccaaggttggtgattc 261 |||||||||||||||||||| Sbjct: 90635 acggccaaggttggtgattc 90654
>emb|AL671920.9| Mouse DNA sequence from clone RP23-445A22 on chromosome X, complete sequence Length = 166399 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 452 cttctttctgcttctcttgtcatg 475 |||||||||||||||||| ||||| Sbjct: 115549 cttctttctgcttctcttttcatg 115526 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,597,296 Number of Sequences: 3902068 Number of extensions: 3597296 Number of successful extensions: 68599 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68577 Number of HSP's gapped (non-prelim): 22 length of query: 514 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 491 effective length of database: 17,143,297,704 effective search space: 8417359172664 effective search space used: 8417359172664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)