ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal35g04 |
|---|---|
| Clone Library Name | barley_pub |
>TSP1_XENLA (P35448) Thrombospondin-1 precursor| Length = 1173 Score = 32.3 bits (72), Expect = 0.28 Identities = 18/39 (46%), Positives = 22/39 (56%) Frame = -3 Query: 176 SSTNSNITFDETSNGSSAEGKVPHVGHKRRSSQPCTAVC 60 S TNS IT D NGSS + ++GHK + Q AVC Sbjct: 237 SMTNSVITLDNPVNGSSPAIRTNYIGHKTKDLQ---AVC 272
>NUAM_DROME (Q94511) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) Length = 731 Score = 31.2 bits (69), Expect = 0.63 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +2 Query: 23 ALLGVVCSSMCRHKQQCMVGNCGACDQHEELSPQPRNRC 139 A +GV C H++ + GNC C E SP+P C Sbjct: 64 AQIGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVAAC 102
>NUAM_RECAM (O21241) NADH-ubiquinone oxidoreductase 75 kDa subunit (EC 1.6.5.3)| (EC 1.6.99.3) (Complex I-75KD) (CI-75KD) (NADH dehydrogenase subunit 11) Length = 691 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +2 Query: 23 ALLGVVCSSMCRHKQQCMVGNCGACDQHEELSPQPRNRC 139 A +G+ C H++ + GNC C E SP+P C Sbjct: 24 AQVGIEIPRFCYHERLSIAGNCRMCLVEVEKSPKPVASC 62
>KLK1_PAPHA (Q28773) Kallikrein-1 precursor (EC 3.4.21.35) (Tissue kallikrein)| (Kidney/pancreas/salivary gland kallikrein) Length = 258 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +3 Query: 24 PYWVLCVALCVGTNSSAWLG 83 P WVL A C+G N WLG Sbjct: 54 PQWVLTAAHCIGDNYQLWLG 73
>NUAM_SOLTU (Q43644) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75KD) (CI-75KD) (76 kDa mitochondrial complex I subunit) Length = 738 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +2 Query: 26 LLGVVCSSMCRHKQQCMVGNCGACDQHEELSPQPRNRC 139 + GV C H + + GNC C E SP+P C Sbjct: 91 IAGVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASC 128
>KLK2_HUMAN (P20151) Kallikrein-2 precursor (EC 3.4.21.35) (Tissue| kallikrein-2) (Glandular kallikrein-1) (hGK-1) Length = 261 Score = 28.9 bits (63), Expect = 3.1 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +3 Query: 24 PYWVLCVALCVGTNSSAWLG 83 P WVL A C+ NS WLG Sbjct: 57 PQWVLTAAHCLKKNSQVWLG 76
>NUAM_ARATH (Q9FGI6) NADH-ubiquinone oxidoreductase 75 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75Kd) (CI-75Kd) (75 kDa mitochondrial complex I subunit) Length = 748 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = +2 Query: 32 GVVCSSMCRHKQQCMVGNCGACDQHEELSPQPRNRC 139 GV C H + + GNC C E SP+P C Sbjct: 99 GVDIPRFCYHSRLSIAGNCRMCLVEVEKSPKPVASC 134
>KHSE_PROAC (Q6A8B2) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)| Length = 296 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = -2 Query: 372 HREPH*RPV*TRSGCVLLHYPHPVTGCRA*Q-NTSPQHMLPGSPKQAIARGL 220 H E H R G V L YPHP G N+ PQ GS A+ GL Sbjct: 57 HDESHLVMATLRQGLVELGYPHPDAGLHLTAINSIPQSRGLGSSAAAVVSGL 108
>HUNB_DROVI (P13361) Protein hunchback| Length = 816 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Frame = -3 Query: 176 SSTNSNITFDETSNGSSAE-----GKVPHVGHKRRSSQPCTAVCADT*SYTQHPVGQATV 12 SS N + D S SSA+ G+VP V S+ + ++ S T +P ATV Sbjct: 680 SSANKQLADDPCSGASSADESMETGRVPQVNISASSTASSSGNSSNASSSTSNPTAAATV 739
>CITX_STRP8 (Q8P0Z2) Probable apo-citrate lyase phosphoribosyl-dephospho-CoA| transferase (EC 2.7.7.61) (Holo-ACP synthase) (Holo-citrate lyase synthase) (Apo-ACP nucleodityltransferase) Length = 192 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -3 Query: 227 EVCGRIVKHSVERFRVDSSTNSNITFDETSNGSSAE 120 +VCGR+ KHSVE + S + F++ + SS++ Sbjct: 154 KVCGRLRKHSVEEMQTAISKLLHSFFNKDNQSSSSD 189
>CITX_STRP6 (Q5XC31) Probable apo-citrate lyase phosphoribosyl-dephospho-CoA| transferase (EC 2.7.7.61) (Holo-ACP synthase) (Holo-citrate lyase synthase) (Apo-ACP nucleodityltransferase) Length = 192 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -3 Query: 227 EVCGRIVKHSVERFRVDSSTNSNITFDETSNGSSAE 120 +VCGR+ KHSVE + S + F++ + SS++ Sbjct: 154 KVCGRLRKHSVEEMQTAISKLLHSFFNKDNQSSSSD 189
>CITX_STRP3 (Q8K7F0) Probable apo-citrate lyase phosphoribosyl-dephospho-CoA| transferase (EC 2.7.7.61) (Holo-ACP synthase) (Holo-citrate lyase synthase) (Apo-ACP nucleodityltransferase) Length = 192 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -3 Query: 227 EVCGRIVKHSVERFRVDSSTNSNITFDETSNGSSAE 120 +VCGR+ KHSVE + S + F++ + SS++ Sbjct: 154 KVCGRLRKHSVEEMQTAISKLLHSFFNKDNQSSSSD 189
>CITX_STRP1 (P58160) Probable apo-citrate lyase phosphoribosyl-dephospho-CoA| transferase (EC 2.7.7.61) (Holo-ACP synthase) (Holo-citrate lyase synthase) (Apo-ACP nucleodityltransferase) Length = 192 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = -3 Query: 227 EVCGRIVKHSVERFRVDSSTNSNITFDETSNGSSAE 120 +VCGR+ KHSVE + S + F++ + SS++ Sbjct: 154 KVCGRLRKHSVEEMQTAISKLLHSFFNKDNQSSSSD 189
>MCCA_ARATH (Q42523) Methylcrotonoyl-CoA carboxylase subunit alpha,| mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 1) (MCCase alpha subunit) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) Length = 734 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -3 Query: 275 HHHNTCYRDPQSKQ*QEVCGRIVKHSVERFRVDSSTNSNITFDETSNGSSAEGKVPHV 102 HH + + D + EV + VKHS ST + T++E+++ GKVP + Sbjct: 481 HHKSDLFADESNPAATEVAYKAVKHSAALVAACISTIEHSTWNESNH-----GKVPSI 533
>PTOCB_ECOLI (P19642) PTS system maltose- and glucose-specific EIICB component| [Includes: Maltose and glucose permease IIC component (PTS system maltose- and glucose-specific EIIC component); Maltose- and glucose-specific phosphotransferase enzyme IIB com Length = 530 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = -3 Query: 230 QEVCGRIVKHSVERFRVDSSTNSNITFDETSNGSSAEGKVP 108 QEVCG+ V ++ F+ S + F E++ ++GK+P Sbjct: 256 QEVCGQTVSGALTIFQAQLSCPTTHGFSESATRFLSQGKMP 296
>PRP46_ASHGO (Q75BY3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 425 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +3 Query: 30 WVLCVALCVGTNSSAWLGTAALVTNMRNFPLSRGTVAGLIKGYV 161 WV CV CV +AW T + + +R + L+ G + ++G++ Sbjct: 115 WVRCV--CVDPVDNAWFATGSNDSTIRVWDLATGKLKVTLQGHI 156
>KLK1_MACFA (Q07276) Kallikrein-1 precursor (EC 3.4.21.35) (Tissue kallikrein)| (Kidney/pancreas/salivary gland kallikrein) Length = 257 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +3 Query: 24 PYWVLCVALCVGTNSSAWLG 83 P WVL A C+ N WLG Sbjct: 54 PQWVLTAAHCISDNYQLWLG 73
>ESTA_CANFA (P09582) Arginine esterase precursor (EC 3.4.21.35)| Length = 260 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +3 Query: 24 PYWVLCVALCVGTNSSAWLG 83 P WVL A C +N WLG Sbjct: 57 PEWVLTAAHCANSNCEVWLG 76
>IOJAP_MAIZE (Q41822) Protein Iojap| Length = 228 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -1 Query: 97 TSAAVPNHALLFVPTHRATHNTQ*GRRRSGT 5 TSAAVP+H L P T N + RRR+ + Sbjct: 4 TSAAVPSHGLACAPPAAVTLNPRARRRRASS 34
>HELS_SULTO (Q974S1) Putative ski2-type helicase (EC 3.6.1.-)| Length = 704 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/44 (31%), Positives = 19/44 (43%) Frame = +3 Query: 36 LCVALCVGTNSSAWLGTAALVTNMRNFPLSRGTVAGLIKGYVAV 167 L + G + WL + TN R PL G + KG+V V Sbjct: 178 LSATISNGKEIANWLNAELVATNWRPVPLKEGIIYPEKKGFVVV 221
>LYTA_STAAU (P24556) Autolysin (EC 3.5.1.28) (N-acetylmuramoyl-L-alanine| amidase) Length = 481 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = +1 Query: 289 PAPRHWMRIMQQNTATSCSHRSLV 360 PA R+ +R+ + T+TSC HRS V Sbjct: 304 PANRNTIRLHNEFTSTSCPHRSSV 327
>BFR1_SCHPO (P41820) Brefeldin A resistance protein| Length = 1530 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -1 Query: 328 CSVALSSSSDGVQGLTKYITTTHATGIPKASNSKRFVGELL 206 CS L S + + TTH GI KA K F G+LL Sbjct: 200 CSTFLRSVTSDTVHYKRVEGTTHYDGIDKADMKKFFPGDLL 240
>SPTA2_RAT (P16086) Spectrin alpha chain, brain (Spectrin, non-erythroid alpha| chain) (Alpha-II spectrin) (Fodrin alpha chain) Length = 2472 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -3 Query: 257 YRDPQSKQ*QEVCGRIVKHSVERFRVDSSTNSNITFDETSNGSSAEG 117 Y+DP + Q G++ KH V +++ + + DET N +EG Sbjct: 72 YKDPTNLQ-----GKLQKHQAFEAEVQANSGAIVKLDETGNLMISEG 113
>SPTA2_HUMAN (Q13813) Spectrin alpha chain, brain (Spectrin, non-erythroid alpha| chain) (Alpha-II spectrin) (Fodrin alpha chain) Length = 2472 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -3 Query: 257 YRDPQSKQ*QEVCGRIVKHSVERFRVDSSTNSNITFDETSNGSSAEG 117 Y+DP + Q G++ KH V +++ + + DET N +EG Sbjct: 72 YKDPTNLQ-----GKLQKHQAFEAEVQANSGAIVKLDETGNLMISEG 113
>NUAM_NEUCR (P24918) NADH-ubiquinone oxidoreductase 78 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-78KD) (CI-78KD) Length = 744 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/36 (33%), Positives = 16/36 (44%) Frame = +2 Query: 32 GVVCSSMCRHKQQCMVGNCGACDQHEELSPQPRNRC 139 GV C H++ + GNC C E P+P C Sbjct: 61 GVTIPRYCYHEKLMIAGNCRMCLVEVEKVPKPVASC 96
>AVR9_CLAFU (P22287) Race-specific elicitor A9 precursor| Length = 63 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Frame = +2 Query: 20 PALLGV---VCSSMCRHKQQCMVGNCGACDQHE 109 P LGV C+S C C+ G CG CD H+ Sbjct: 27 PVGLGVGLDYCNSSCTRAFDCL-GQCGRCDFHK 58
>ZN295_HUMAN (Q9ULJ3) Zinc finger protein 295 (Zinc finger and BTB| domain-containing protein 21) Length = 1066 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 295 VQGLTKYITTTHATGIPKASNSKRFVGELLSIPLNV 188 ++GL YI HA + A N +R G+L + L V Sbjct: 1 MEGLLHYINPAHAISLLSALNEERLKGQLCDVLLIV 36
>SPTA2_CHICK (P07751) Spectrin alpha chain, brain (Spectrin, non-erythroid alpha| chain) (Fodrin alpha chain) Length = 2477 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = -3 Query: 257 YRDPQSKQ*QEVCGRIVKHSVERFRVDSSTNSNITFDETSNGSSAEG 117 Y+DP + Q G++ KH V +++ + + DET N EG Sbjct: 72 YKDPSNLQ-----GKLQKHQAFEAEVQANSGAIVKLDETGNQMINEG 113
>GFRA4_CHICK (O93512) GDNF family receptor alpha-4 precursor (GFR-alpha-4)| Length = 431 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 38 VCSSMCRHKQQCMVGNCGACDQHEELSPQPRNRCWS 145 +CSS R +QC+ GN GA +L P +N+C S Sbjct: 38 ICSSKFRTLRQCIAGN-GA----NKLGPDAKNQCRS 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,550,292 Number of Sequences: 219361 Number of extensions: 1175996 Number of successful extensions: 2967 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2881 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2966 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
