>ref|XM_473073.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1749

 Score =  361 bits (182), Expect = 1e-96
 Identities = 323/370 (87%)
 Strand = Plus / Plus

                                                                       
Query: 22  tgccctactgggtgttgtgtgtagctctatgtgtcggcacaaacagcagtgcatggttgg 81
           |||| ||||||||||||||  ||||  ||||| | |||||||||||||| ||||||||||
Sbjct: 341 tgccgtactgggtgttgtgcatagccttatgtattggcacaaacagcagcgcatggttgg 400

                                                                       
Query: 82  gaactgcggcgcttgtgaccaacatgaggaactttcccctcagccgaggaaccgttgctg 141
           | || || || ||||||||||| |||||||||||||| |||||||| ||||| |||||||
Sbjct: 401 gcaccgctgcacttgtgaccaatatgaggaactttcctctcagccggggaactgttgctg 460

                                                                       
Query: 142 gtctcatcaaaggttatgttgctgttagtgctgctgtctacacggaaacgttcaacggaa 201
           |||| ||||| || ||||||||||| ||||||||||||||||| ||||| || || ||||
Sbjct: 461 gtctgatcaagggctatgttgctgtgagtgctgctgtctacacagaaacatttaatggaa 520

                                                                       
Query: 202 tgcttaacaattcgcccacaaacctcttgctattgcttgctttggggatcccggtagcat 261
           ||||| | || || ||||||||||| ||||| ||||||||||||||||||||    ||||
Sbjct: 521 tgcttcagaactctcccacaaaccttttgctgttgcttgctttggggatccccaccgcat 580

                                                                       
Query: 262 gtgttgtggtgatgtattttgttaggccctgcaccccgtcactggatgaggataatgcaa 321
           ||||| |||||||||||||||||||||| ||||| || |||||||||||||| || ||| 
Sbjct: 581 gtgttctggtgatgtattttgttaggccttgcactccatcactggatgaggacaacgcag 640

                                                                       
Query: 322 cagaacacagccacttcgtgttcacacaggtctctagtgtggttctcggtgtatatctta 381
           |||| ||||| || ||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 641 cagagcacagtcatttcatgttcacacagatctctagtgtggttctcggtgtatatctta 700

                     
Query: 382 tggtggctac 391
           |||| |||||
Sbjct: 701 tggtagctac 710

>dbj|AK099877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H21, full
           insert sequence
          Length = 2057

 Score =  353 bits (178), Expect = 3e-94
 Identities = 322/370 (87%)
 Strand = Plus / Plus

                                                                       
Query: 22  tgccctactgggtgttgtgtgtagctctatgtgtcggcacaaacagcagtgcatggttgg 81
           |||| ||||||||||||||  ||||  ||||| | |||||||||||||| ||||||||||
Sbjct: 291 tgccgtactgggtgttgtgcatagccttatgtattggcacaaacagcagcgcatggttgg 350

                                                                       
Query: 82  gaactgcggcgcttgtgaccaacatgaggaactttcccctcagccgaggaaccgttgctg 141
           | || || || ||||||||||| |||||||||||||| |||||||| ||||| |||||||
Sbjct: 351 gcaccgctgcacttgtgaccaatatgaggaactttcctctcagccggggaactgttgctg 410

                                                                       
Query: 142 gtctcatcaaaggttatgttgctgttagtgctgctgtctacacggaaacgttcaacggaa 201
           |||| ||||| || ||||||||||| ||||||||||||||||| ||||| || || ||||
Sbjct: 411 gtctgatcaagggctatgttgctgtgagtgctgctgtctacacagaaacatttaatggaa 470

                                                                       
Query: 202 tgcttaacaattcgcccacaaacctcttgctattgcttgctttggggatcccggtagcat 261
           ||||| | || || ||||||||||| ||||| ||||||||||||||||||||    ||||
Sbjct: 471 tgcttcagaactctcccacaaaccttttgctgttgcttgctttggggatccccaccgcat 530

                                                                       
Query: 262 gtgttgtggtgatgtattttgttaggccctgcaccccgtcactggatgaggataatgcaa 321
           ||||| ||||||||| |||||||||||| ||||| || |||||||||||||| || ||| 
Sbjct: 531 gtgttctggtgatgtgttttgttaggccttgcactccatcactggatgaggacaacgcag 590

                                                                       
Query: 322 cagaacacagccacttcgtgttcacacaggtctctagtgtggttctcggtgtatatctta 381
           |||| ||||| || ||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 591 cagagcacagtcatttcatgttcacacagatctctagtgtggttctcggtgtatatctta 650

                     
Query: 382 tggtggctac 391
           |||| |||||
Sbjct: 651 tggtagctac 660

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  347 bits (175), Expect = 2e-92
 Identities = 295/335 (88%)
 Strand = Plus / Plus

                                                                            
Query: 57       ggcacaaacagcagtgcatggttgggaactgcggcgcttgtgaccaacatgaggaacttt 116
                |||||||||||||| ||||||||||| || || || ||||||||||| ||||||||||||
Sbjct: 25080704 ggcacaaacagcagcgcatggttgggcaccgctgcacttgtgaccaatatgaggaacttt 25080763

                                                                            
Query: 117      cccctcagccgaggaaccgttgctggtctcatcaaaggttatgttgctgttagtgctgct 176
                || |||||||| ||||| ||||||||||| ||||| || ||||||||||| |||||||||
Sbjct: 25080764 cctctcagccggggaactgttgctggtctgatcaagggctatgttgctgtgagtgctgct 25080823

                                                                            
Query: 177      gtctacacggaaacgttcaacggaatgcttaacaattcgcccacaaacctcttgctattg 236
                |||||||| ||||| || || ||||||||| | || || ||||||||||| ||||| |||
Sbjct: 25080824 gtctacacagaaacatttaatggaatgcttcagaactctcccacaaaccttttgctgttg 25080883

                                                                            
Query: 237      cttgctttggggatcccggtagcatgtgttgtggtgatgtattttgttaggccctgcacc 296
                |||||||||||||||||    ||||||||| |||||||||||||||||||||| ||||| 
Sbjct: 25080884 cttgctttggggatccccaccgcatgtgttctggtgatgtattttgttaggccttgcact 25080943

                                                                            
Query: 297      ccgtcactggatgaggataatgcaacagaacacagccacttcgtgttcacacaggtctct 356
                || |||||||||||||| || ||| |||| ||||| || ||| ||||||||||| |||||
Sbjct: 25080944 ccatcactggatgaggacaacgcagcagagcacagtcatttcatgttcacacagatctct 25081003

                                                   
Query: 357      agtgtggttctcggtgtatatcttatggtggctac 391
                ||||||||||||||||||||||||||||| |||||
Sbjct: 25081004 agtgtggttctcggtgtatatcttatggtagctac 25081038

>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
             complete sequence
          Length = 150187

 Score =  347 bits (175), Expect = 2e-92
 Identities = 295/335 (88%)
 Strand = Plus / Plus

                                                                         
Query: 57    ggcacaaacagcagtgcatggttgggaactgcggcgcttgtgaccaacatgaggaacttt 116
             |||||||||||||| ||||||||||| || || || ||||||||||| ||||||||||||
Sbjct: 28131 ggcacaaacagcagcgcatggttgggcaccgctgcacttgtgaccaatatgaggaacttt 28190

                                                                         
Query: 117   cccctcagccgaggaaccgttgctggtctcatcaaaggttatgttgctgttagtgctgct 176
             || |||||||| ||||| ||||||||||| ||||| || ||||||||||| |||||||||
Sbjct: 28191 cctctcagccggggaactgttgctggtctgatcaagggctatgttgctgtgagtgctgct 28250

                                                                         
Query: 177   gtctacacggaaacgttcaacggaatgcttaacaattcgcccacaaacctcttgctattg 236
             |||||||| ||||| || || ||||||||| | || || ||||||||||| ||||| |||
Sbjct: 28251 gtctacacagaaacatttaatggaatgcttcagaactctcccacaaaccttttgctgttg 28310

                                                                         
Query: 237   cttgctttggggatcccggtagcatgtgttgtggtgatgtattttgttaggccctgcacc 296
             |||||||||||||||||    ||||||||| |||||||||||||||||||||| ||||| 
Sbjct: 28311 cttgctttggggatccccaccgcatgtgttctggtgatgtattttgttaggccttgcact 28370

                                                                         
Query: 297   ccgtcactggatgaggataatgcaacagaacacagccacttcgtgttcacacaggtctct 356
             || |||||||||||||| || ||| |||| ||||| || ||| ||||||||||| |||||
Sbjct: 28371 ccatcactggatgaggacaacgcagcagagcacagtcatttcatgttcacacagatctct 28430

                                                
Query: 357   agtgtggttctcggtgtatatcttatggtggctac 391
             ||||||||||||||||||||||||||||| |||||
Sbjct: 28431 agtgtggttctcggtgtatatcttatggtagctac 28465

>gb|AF506028.1| Poncirus trifoliata citrus tristeza virus resistance gene locus, complete
              sequence
          Length = 282699

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 79/94 (84%)
 Strand = Plus / Minus

                                                                          
Query: 66     agcagtgcatggttgggaactgcggcgcttgtgaccaacatgaggaactttcccctcagc 125
              |||| ||||||||| ||||| || | ||| || |||||||||||||| ||||||||||| 
Sbjct: 195277 agcaatgcatggtttggaacagcagtgctagtaaccaacatgaggaattttcccctcagt 195218

                                                
Query: 126    cgaggaaccgttgctggtctcatcaaaggttatg 159
               |||| || ||||||||  || ||||||||||||
Sbjct: 195217 agaggtactgttgctggcatcctcaaaggttatg 195184

>ref|XM_419417.1| PREDICTED: Gallus gallus similar to usherin isoform B (LOC421358),
            mRNA
          Length = 16713

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 57   ggcacaaacagcagtgcatggt 78
            ||||||||||||||||||||||
Sbjct: 8710 ggcacaaacagcagtgcatggt 8731

>emb|AL358074.22| Human DNA sequence from clone RP11-423C15 on chromosome 9 Contains
            the 5' end of the MAPKAP1 gene for mitogen-activated
            protein kinase associated protein 1, a novel gene, the 5'
            end of the PBX3 gene for pre-B-cell leukemia
            transcription factor 3 and three CpG islands, complete
            sequence
          Length = 109081

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 307  atgaggataatgcaacagaac 327
            |||||||||||||||||||||
Sbjct: 6891 atgaggataatgcaacagaac 6911

>gb|AC159546.4| Mus musculus 6 BAC RP23-450B23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 192227

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 319   caacagaacacagccacttcgtgtt 343
             ||||||| |||||||||||||||||
Sbjct: 69530 caacagagcacagccacttcgtgtt 69506

>gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell Park Cancer Institute
              Drosophila BAC library) complete sequence
          Length = 169138

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 158    tgttgctgttagtgctgctgt 178
              |||||||||||||||||||||
Sbjct: 160538 tgttgctgttagtgctgctgt 160558

>gb|AC010068.8| Drosophila melanogaster 3L BAC RP98-15K24 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 178607

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   tgttgctgttagtgctgctgt 178
             |||||||||||||||||||||
Sbjct: 22997 tgttgctgttagtgctgctgt 23017

>ref|NM_168938.1| Drosophila melanogaster eagle CG7383-RB, transcript variant B (eg),
           mRNA
          Length = 1884

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 tgttgctgttagtgctgctgt 178
           |||||||||||||||||||||
Sbjct: 46  tgttgctgttagtgctgctgt 66

>gb|AC153371.7| Mus musculus 6 BAC RP23-304H3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206412

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 319    caacagaacacagccacttcgtgtt 343
              ||||||| |||||||||||||||||
Sbjct: 155976 caacagagcacagccacttcgtgtt 155952

>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete
              sequence
          Length = 294272

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 158    tgttgctgttagtgctgctgt 178
              |||||||||||||||||||||
Sbjct: 228257 tgttgctgttagtgctgctgt 228277

>ref|XM_633161.1| Dictyostelium discoideum hypothetical protein (DDB0191483), partial
            mRNA
          Length = 3468

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  ttgtggtgatgtattttgtt 284
            ||||||||||||||||||||
Sbjct: 1386 ttgtggtgatgtattttgtt 1367

>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence
          Length = 215980

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    acatgaggaactttcccctc 122
              ||||||||||||||||||||
Sbjct: 195817 acatgaggaactttcccctc 195836

>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence
          Length = 195273

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   acatgaggaactttcccctc 122
             ||||||||||||||||||||
Sbjct: 16770 acatgaggaactttcccctc 16789

>gb|AC090432.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-454P8, complete
              sequence
          Length = 148344

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    gttatgttgctgttagtgct 173
              ||||||||||||||||||||
Sbjct: 120316 gttatgttgctgttagtgct 120335

>gb|AC102639.5| Mus musculus chromosome 3, clone RP23-461I15, complete sequence
          Length = 199243

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tgtgttgtggtgatgtattt 280
            ||||||||||||||||||||
Sbjct: 2753 tgtgttgtggtgatgtattt 2734

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 178    tctacacggaaacgttcaacggaa 201
              ||||||||||||||||| ||||||
Sbjct: 636351 tctacacggaaacgttccacggaa 636374

>gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome 3, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    tgtgttgtggtgatgtattt 280
              ||||||||||||||||||||
Sbjct: 127471 tgtgttgtggtgatgtattt 127452

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 178     tctacacggaaacgttcaacggaa 201
               ||||||||||||||||| ||||||
Sbjct: 1076580 tctacacggaaacgttccacggaa 1076603

>gb|AC153562.2| Mus musculus 10 BAC RP23-143D12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 212486

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    gttagtgctgctgtctacac 184
              ||||||||||||||||||||
Sbjct: 141918 gttagtgctgctgtctacac 141937

>gb|AC124235.11| Mus musculus chromosome 13, clone RP23-273G24, complete sequence
          Length = 242383

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    ttgctattgcttgctttggg 247
              ||||||||||||||||||||
Sbjct: 227718 ttgctattgcttgctttggg 227737

>gb|AC153560.5| Mus musculus 10 BAC RP23-376E10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 183485

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    gttagtgctgctgtctacac 184
              ||||||||||||||||||||
Sbjct: 154534 gttagtgctgctgtctacac 154515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,874,012
Number of Sequences: 3902068
Number of extensions: 2874012
Number of successful extensions: 51290
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51222
Number of HSP's gapped (non-prelim): 64
length of query: 391
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 369
effective length of database: 17,147,199,772
effective search space: 6327316715868
effective search space used: 6327316715868
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)