ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal35f07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119012 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 118953 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118952 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 118893 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118892 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 118833 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118832 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 118773 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118772 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118713 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118712 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 118653 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118652 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 118593 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118592 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 118533 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118532 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 118482 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96144 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 96203 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96204 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 96263 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96264 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 96323 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96324 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 96383 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96384 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96443 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96444 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 96503 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96504 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 96563 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96564 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 96623 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96624 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 96674
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119012 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 118953 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118952 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 118893 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118892 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 118833 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118832 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 118773 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118772 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118713 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118712 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 118653 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118652 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 118593 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118592 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 118533 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118532 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 118482 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96144 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 96203 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96204 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 96263 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96264 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 96323 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96324 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 96383 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96384 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96443 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96444 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 96503 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96504 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 96563 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96564 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 96623 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96624 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 96674
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118961 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 118902 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118901 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 118842 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118841 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 118782 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118781 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 118722 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118721 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118662 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118661 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 118602 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118601 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 118542 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118541 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 118482 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 118431 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96089 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 96148 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96149 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 96208 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96209 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 96268 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96269 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 96328 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96329 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96388 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96389 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 96448 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96449 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 96508 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96509 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 96568 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96569 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 96619
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508722 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 31508781 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508782 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 31508841 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508842 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 31508901 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508902 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 31508961 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508962 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 31509021 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509022 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 31509081 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509082 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 31509141 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509142 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 31509201 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509202 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 31509252 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 64 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 124 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 184 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 244 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 304 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 364 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11512958 Query: 424 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 463 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11512957 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11512918 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Minus Query: 166 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 226 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 286 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 346 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 405 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 406 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 465 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27320423 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27320364 Query: 466 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320363 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27320304 Query: 526 acggag 531 |||||| Sbjct: 27320303 acggag 27320298 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 80 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 139 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 140 taaaggaggtggggg 154 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 83 gtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83874 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 83815 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83814 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 83755 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83754 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 83695 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83694 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 83635 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83634 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 83575 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83574 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 83515 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83514 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 83455 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83454 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 83395 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83394 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 83344
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118981 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 118922 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118921 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 118862 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118861 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 118802 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118801 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 118742 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118741 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118682 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118681 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 118622 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118621 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 118562 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118561 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 118502 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118501 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 118451 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96137 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 96196 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96197 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 96256 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96257 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 96316 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96317 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 96376 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96377 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96436 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96437 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 96496 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96497 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 96556 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96557 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 96616 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96617 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 96667
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123185 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 123244 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123245 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 123304 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123305 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 123364 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123365 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 123424 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123425 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 123484 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123485 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 123544 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123545 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 123604 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123605 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 123664 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123665 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 123715 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14911 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 14970 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14971 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 15030 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15031 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 15090 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15091 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 15150 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15151 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 15210 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15211 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 15270 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15271 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 15330 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15331 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 15390 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15391 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 15441
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141719 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 141778 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141779 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 141838 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141839 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 141898 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141899 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 141958 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141959 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 142018 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142019 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 142078 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142079 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 142138 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142139 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 142198 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142199 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 142249
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269071 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 9269130 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269131 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 9269190 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269191 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 9269250 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269251 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 9269310 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269311 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 9269370 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269371 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 9269430 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269431 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 9269490 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269491 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 9269550 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269551 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 9269601 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228571 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 9228630 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228631 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 9228690 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228691 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 9228750 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228751 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 9228810 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228811 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 9228870 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228871 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 9228930 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228931 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 9228990 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228991 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 9229050 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229051 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 9229101 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165159 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 9165218 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165219 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 9165278 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165279 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 9165338 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165339 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 9165398 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165399 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 9165458 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165459 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 9165518 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165519 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 9165578 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165579 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 9165638 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165639 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 9165689 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056985 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 9057044 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057045 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 9057104 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057105 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 9057164 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057165 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 9057224 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057225 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 9057284 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057285 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 9057344 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057345 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 9057404 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057405 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 9057464 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057465 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 9057515
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939056 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 19939115 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939116 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 19939175 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939176 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 19939235 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939236 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 19939295 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939296 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 19939355 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939356 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 19939415 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939416 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 19939475 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939476 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 19939535 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939536 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 19939586 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276375 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 10276316 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276315 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 10276256 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276255 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 10276196 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276195 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 10276136 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276135 agatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 10276076 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276075 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 10276016 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276015 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 10275956 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275955 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 10275896 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275895 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 10275845 Score = 1037 bits (523), Expect = 0.0 Identities = 529/531 (99%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387923 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 10387982 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387983 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 10388042 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388043 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 10388102 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388103 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 10388162 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10388163 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggag 10388222 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388223 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 10388282 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388283 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 10388342 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10388343 cctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggcgta 10388402 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388403 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 10388453 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 220 gatcgagcgcccttgcgctgaagatgaacggggctaagc 258 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 161 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241210 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 9241151 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241150 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 9241091 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241090 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 9241031 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241030 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 9240971 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240970 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 9240911 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240910 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 9240851 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240850 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 9240791 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240790 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 9240731 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240730 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 9240680 Score = 139 bits (70), Expect = 1e-29 Identities = 108/118 (91%), Gaps = 2/118 (1%) Strand = Plus / Minus Query: 3 caaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagac 62 |||||||||||||||||||||||||||||| |||||||||||| | |||| |||||||| Sbjct: 3580500 caaactctgaatactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagac 3580442 Query: 63 gatgggggataagcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 119 |||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580441 gatgggggataagcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 108 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 161 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 162 acagccaggaggtttgcctagaagcagccaccctttaaagag 203 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 269 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 315 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 418 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 |||||||| |||| |||||||| |||| |||| | ||||||||||||||||| Sbjct: 22199029 tttcctccacaagattcgtccatggagagtgaattagggcctaagatcaggc 22198978 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagct 272 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 107 accagctaaggcccctaaatgaccgctcagtgataaagga 146 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599238 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 31599297 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599298 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 31599357 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599358 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 31599417 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599418 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 31599477 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599478 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 31599537 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599538 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 31599597 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599598 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 31599657 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599658 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 31599717 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599718 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 31599768 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 64 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 124 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 184 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 244 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 304 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 364 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11509721 Query: 424 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 463 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11509720 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11509681 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Minus Query: 166 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 226 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 286 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 346 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 405 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 406 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 465 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27411746 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27411687 Query: 466 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411686 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27411627 Query: 526 acggag 531 |||||| Sbjct: 27411626 acggag 27411621 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 80 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 139 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 140 taaaggaggtggggg 154 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 83 gtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46987 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 46928 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46927 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 46868 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46867 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 46808 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46807 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 46748 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46747 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 46688 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46687 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 46628 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46627 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 46568 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46567 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 46508 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46507 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 46457
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52423 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 52364 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52363 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 52304 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52303 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 52244 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52243 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 52184 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52183 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 52124 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52123 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 52064 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52063 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 52004 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52003 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 51944 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51943 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 51893
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 582 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 642 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 702 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 762 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 822 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 882 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 942 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 1002 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 1053
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 777 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 837 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 897 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 898 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 957 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 958 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1017 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1018 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 1077 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1078 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 1137 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1138 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 1197 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1198 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 1248
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 648 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 708 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 768 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 828 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 888 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 948 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 949 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 1008 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 1068 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1069 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 1119
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 777 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 837 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 897 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 898 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 957 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 958 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1017 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1018 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 1077 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1078 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 1137 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1138 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 1197 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1198 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 1248
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950332 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 19950391 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950392 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 19950451 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950452 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 19950511 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950512 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 19950571 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950572 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 19950631 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950632 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 19950691 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950692 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 19950751 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950752 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 19950811 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950812 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 19950862 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282414 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 10282355 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282354 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 10282295 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282294 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 10282235 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282234 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 10282175 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282174 agatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 10282115 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282114 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 10282055 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282054 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 10281995 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281994 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 10281935 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281934 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 10281884 Score = 1037 bits (523), Expect = 0.0 Identities = 529/531 (99%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393962 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 10394021 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394022 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 10394081 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394082 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 10394141 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394142 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 10394201 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10394202 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggag 10394261 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394262 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 10394321 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394322 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 10394381 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10394382 cctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggcgta 10394441 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394442 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 10394492 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 220 gatcgagcgcccttgcgctgaagatgaacggggctaagc 258 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 161 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118955 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 118896 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118895 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 118836 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118835 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 118776 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118775 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 118716 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118715 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118656 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118655 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 118596 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118595 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 118536 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118535 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 118476 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118475 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 118425 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96084 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 96143 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96144 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 96203 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96204 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 96263 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96264 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 96323 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96324 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96383 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96384 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 96443 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96444 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 96503 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96504 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 96563 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96564 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 96614
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119147 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 119088 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119087 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 119028 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119027 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 118968 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118967 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 118908 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118907 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118848 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118847 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 118788 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118787 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 118728 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118727 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 118668 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118667 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 118617 Score = 1053 bits (531), Expect = 0.0 Identities = 531/531 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95747 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 95806 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95807 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 95866 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95867 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 95926 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95927 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 95986 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95987 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96046 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96047 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 96106 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96107 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 96166 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96167 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 96226 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96227 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 96277
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117928 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 117869 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117868 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 117809 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117808 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 117749 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117748 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 117689 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117688 agatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 117629 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117628 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 117569 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117568 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 117509 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117508 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 117449 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117448 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 117398
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43971 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 43912 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43911 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 43852 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43851 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 43792 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43791 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 43732 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43731 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 43672 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 43671 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 43612 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43611 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 43552 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43551 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 43492 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43491 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 43441 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21146 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 21205 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21206 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 21265 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21266 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 21325 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21326 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 21385 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21386 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 21445 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 21446 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 21505 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21506 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 21565 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21566 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 21625 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21626 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 21676
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57700 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 57641 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57640 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 57581 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57580 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 57521 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57520 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 57461 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 57460 agatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 57401 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57400 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 57341 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57340 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 57281 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57280 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 57221 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57220 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 57170
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 542 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 482 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 422 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 362 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 302 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 301 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 242 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 182 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 122 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 71
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122811 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 122752 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122751 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 122692 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122691 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 122632 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122631 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 122572 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122571 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 122512 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122511 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 122452 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122451 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 122392 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122391 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 122332 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122331 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 122281 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100026 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 100085 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100086 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 100145 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100146 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 100205 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100206 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 100265 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100266 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 100325 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 100326 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 100385 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100386 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 100445 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100446 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 100505 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100506 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 100556
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 400 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 460 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 520 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 580 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 640 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 641 agcgttccgccttagagggaagcaaccgcgaaagcgggggttgacgaagcggaagcgaga 700 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 760 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 820 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 871
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123528 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 123469 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123468 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 123409 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123408 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 123349 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123348 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 123289 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123288 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 123229 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123228 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 123169 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123168 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 123109 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123108 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 123049 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123048 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 122998 Score = 1045 bits (527), Expect = 0.0 Identities = 530/531 (99%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100703 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 100762 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100763 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 100822 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100823 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 100882 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100883 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 100942 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100943 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 101002 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 101003 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 101062 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101063 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 101122 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101123 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 101182 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101183 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 101233
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1037 bits (523), Expect = 0.0 Identities = 529/531 (99%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94315 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 94374 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94375 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 94434 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94435 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 94494 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94495 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 94554 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 94555 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggag 94614 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94615 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 94674 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94675 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 94734 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 94735 cctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggcgta 94794 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94795 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 94845
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1037 bits (523), Expect = 0.0 Identities = 529/531 (99%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28379 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 28438 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28439 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 28498 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28499 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 28558 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28559 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 28618 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 28619 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggag 28678 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28679 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 28738 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28739 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 28798 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 28799 cctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggcgta 28858 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28859 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 28909
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 1037 bits (523), Expect = 0.0 Identities = 523/523 (100%) Strand = Plus / Plus Query: 9 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 69 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 129 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 189 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 249 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 309 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 360 Query: 369 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 420 Query: 429 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 480 Query: 489 acaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 acaacaggtcaatattcctgtactaccccttgttggtacggag 523
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 993 bits (501), Expect = 0.0 Identities = 507/509 (99%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 450 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 390 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 330 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 270 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 210 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 209 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 150 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 90 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 30 Query: 481 gtcgatggacaacaggtcaatattcctgt 509 |||||||||||||||||||||||||||| Sbjct: 29 ctcgatggacaacaggtcaatattcctgt 1
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 981 bits (495), Expect = 0.0 Identities = 523/531 (98%), Gaps = 1/531 (0%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122752 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 122693 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122692 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 122633 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 122632 cttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcct 122573 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 122572 agaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcgctga 122514 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122513 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 122454 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122453 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 122394 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122393 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 122334 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122333 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggctaa 122274 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122273 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 122223 Score = 981 bits (495), Expect = 0.0 Identities = 523/531 (98%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99985 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 100044 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100045 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 100104 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 100105 cttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcct 100164 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 100165 agaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcgctga 100223 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100224 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 100283 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 100284 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 100343 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100344 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 100403 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 100404 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggctaa 100463 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100464 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 100514
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 981 bits (495), Expect = 0.0 Identities = 523/531 (98%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6338 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 6397 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6398 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 6457 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 6458 cttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcct 6517 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 6518 agaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcgctga 6576 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6577 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 6636 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6637 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 6696 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6697 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 6756 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6757 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggctaa 6816 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6817 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 6867
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 981 bits (495), Expect = 0.0 Identities = 523/531 (98%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 985 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1045 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1046 cttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcct 1105 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 1106 agaagcagccaccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcgctga 1164 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1165 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1224 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1225 agcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgaga 1284 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1285 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 1344 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1345 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggctaa 1404 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1405 gtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 1455
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 930 bits (469), Expect = 0.0 Identities = 469/469 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 398 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 458 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 518 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 578 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 638 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 698 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 758 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 807
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 910 bits (459), Expect = 0.0 Identities = 462/463 (99%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 776 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 836 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 837 ctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacagccaggaggtttgcct 896 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 956 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 957 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1016 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 1076 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 1136 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaaga 463 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1137 cctccgcaaggttcgtccacggagggtgagtcagggcctaaga 1179
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 914 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 973 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1033 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1034 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1093 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1094 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1153 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1213 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||| Sbjct: 1214 agcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgaga 1273 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 1274 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggtt 1333 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1334 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 1393 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1394 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 1438
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 132083 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 132024 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132023 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 131964 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 131963 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 131904 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131903 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 131844 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131843 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 131784 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||| Sbjct: 131783 agcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgaga 131724 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 131723 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggtt 131664 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131663 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 131604 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131603 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 131559 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 104681 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 104740 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104741 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 104800 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 104801 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 104860 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104861 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 104920 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104921 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 104980 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||| Sbjct: 104981 agcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgaga 105040 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 105041 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggtt 105100 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105101 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 105160 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105161 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 105205
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 133044 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 132985 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132984 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 132925 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 132924 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 132865 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 132864 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 132805 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132804 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 132745 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||| Sbjct: 132744 agcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgaga 132685 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 132684 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggtt 132625 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132624 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 132565 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132564 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 132520 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 105605 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 105664 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105665 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 105724 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 105725 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 105784 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 105785 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 105844 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105845 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 105904 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||| Sbjct: 105905 agcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgaga 105964 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 105965 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggtt 106024 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106025 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 106084 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106085 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 106129
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 138589 ggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgag 138530 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138529 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 138470 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 138469 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 138410 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 138409 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 138350 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 138349 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 138290 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||| |||||||| ||||| |||||| || |||||||||||||||||| Sbjct: 138289 agcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcgaga 138230 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 138229 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggtt 138170 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138169 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 138110 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138109 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 138065 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 110508 ggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgag 110567 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110568 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 110627 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 110628 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 110687 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 110688 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 110747 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 110748 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 110807 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||| |||||||| ||||| |||||| || |||||||||||||||||| Sbjct: 110808 agcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcgaga 110867 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 110868 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggtt 110927 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110928 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 110987 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110988 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 111032
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 890 bits (449), Expect = 0.0 Identities = 506/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 141192 ggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtgag 141133 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141132 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 141073 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 141072 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 141013 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 141012 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 140953 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 140952 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 140893 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| |||||| ||||| ||| || || |||||||||||||||||| Sbjct: 140892 agcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgaga 140833 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 140832 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 140773 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140772 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 140713 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140712 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 140668 Score = 890 bits (449), Expect = 0.0 Identities = 506/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 112465 ggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtgag 112524 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112525 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 112584 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 112585 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 112644 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 112645 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 112704 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 112705 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 112764 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| |||||| ||||| ||| || || |||||||||||||||||| Sbjct: 112765 agcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgaga 112824 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 112825 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 112884 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112885 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 112944 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112945 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 112989
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 890 bits (449), Expect = 0.0 Identities = 506/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 138794 ggcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgag 138735 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138734 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 138675 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 138674 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 138615 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 138614 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 138555 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 138554 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 138495 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||| Sbjct: 138494 agcgttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaagcgaga 138435 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 138434 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 138375 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138374 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 138315 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138314 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 138270 Score = 890 bits (449), Expect = 0.0 Identities = 506/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 110505 ggcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgag 110564 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110565 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 110624 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 110625 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 110684 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 110685 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 110744 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 110745 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 110804 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||| Sbjct: 110805 agcgttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaagcgaga 110864 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 110865 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 110924 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110925 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 110984 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110985 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 111029
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 888 bits (448), Expect = 0.0 Identities = 506/525 (96%), Gaps = 4/525 (0%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 126948 ggcaaactctgaatactagatatgaccccaaa----caggggtcaaggtcggccagtgag 126893 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126892 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 126833 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 126832 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 126773 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 126772 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 126713 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126712 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 126653 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||| ||||| |||| || || |||||||||||||||||| Sbjct: 126652 agcgttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcgaga 126593 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 126592 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 126533 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126532 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 126473 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 126472 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 126428 Score = 888 bits (448), Expect = 0.0 Identities = 506/525 (96%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107974 ggcaaactctgaatactagatatgaccccaaa----caggggtcaaggtcggccagtgag 108029 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108030 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 108089 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 108090 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 108149 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 108150 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 108209 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108210 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 108269 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||| ||||| |||| || || |||||||||||||||||| Sbjct: 108270 agcgttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcgaga 108329 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 108330 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 108389 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108390 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 108449 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108450 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 108494
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 886 bits (447), Expect = 0.0 Identities = 447/447 (100%) Strand = Plus / Plus Query: 69 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 129 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 189 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 249 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 309 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 369 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 360 Query: 429 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 420 Query: 489 acaacaggtcaatattcctgtactacc 515 ||||||||||||||||||||||||||| Sbjct: 421 acaacaggtcaatattcctgtactacc 447
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130752 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 130693 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130692 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 130633 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 130632 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 130573 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 130572 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 130513 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 130512 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 130453 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| |||||| ||||| ||||| || |||||||||||||||||| Sbjct: 130452 agcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgaga 130393 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 130392 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 130333 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130332 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 130273 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 130272 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 130228 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103883 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 103942 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103943 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 104002 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 104003 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 104062 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104063 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 104122 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 104123 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 104182 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| |||||| ||||| ||||| || |||||||||||||||||| Sbjct: 104183 agcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgaga 104242 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 104243 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 104302 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104303 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 104362 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104363 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 104407
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 882 bits (445), Expect = 0.0 Identities = 506/525 (96%), Gaps = 1/525 (0%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 133307 ggcaaactctgaatactagatatgacccaaaaatcacaggg-tcaaggtcggccagtgag 133249 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133248 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 133189 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 133188 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 133129 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 133128 agaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 133069 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 133068 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 133009 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| |||||| ||||| |||| || || |||||||||||||||||| Sbjct: 133008 agcgttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcgaga 132949 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 132948 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 132889 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132888 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 132829 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132828 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 132784 Score = 882 bits (445), Expect = 0.0 Identities = 506/525 (96%), Gaps = 1/525 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 104664 ggcaaactctgaatactagatatgacccaaaaatcacaggg-tcaaggtcggccagtgag 104722 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104723 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 104782 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 104783 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 104842 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104843 agaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 104902 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 104903 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 104962 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| |||||| ||||| |||| || || |||||||||||||||||| Sbjct: 104963 agcgttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcgaga 105022 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 105023 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 105082 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105083 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 105142 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105143 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 105187
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 880 bits (444), Expect = 0.0 Identities = 495/512 (96%) Strand = Plus / Minus Query: 20 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 79 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 80 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 139 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 140 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 199 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 200 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 260 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 341 Query: 320 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 379 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 281 Query: 380 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 221 Query: 440 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtca 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtca 161 Query: 500 atattcctgtactaccccttgttggtacggag 531 |||||||||||||||||||||||||||||||| Sbjct: 160 atattcctgtactaccccttgttggtacggag 129
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131860 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 131801 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131800 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 131741 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 131740 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 131681 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131680 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 131621 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 131620 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 131561 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| |||||| ||||| ||||| || |||||||||||||||||| Sbjct: 131560 agcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgaga 131501 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 131500 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 131441 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131440 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 131381 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131380 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 131336 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105018 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 105077 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105078 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 105137 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 105138 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 105197 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 105198 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 105257 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 105258 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 105317 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| |||||| ||||| ||||| || |||||||||||||||||| Sbjct: 105318 agcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgaga 105377 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 105378 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 105437 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105438 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 105497 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105498 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 105542
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 134986 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 134927 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134926 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134867 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134866 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134807 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134806 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134747 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 134746 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 134687 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||| | ||| ||| | || |||||||||||||||||| Sbjct: 134686 agcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgaga 134627 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 134626 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 134567 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134566 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 134507 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134506 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 134462 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 106920 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 106979 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106980 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107039 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107040 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107099 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107100 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107159 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107160 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 107219 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||| | ||| ||| | || |||||||||||||||||| Sbjct: 107220 agcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgaga 107279 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 107280 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 107339 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107340 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 107399 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107400 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 107444
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 135677 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 135618 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135617 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135558 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135557 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 135498 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135497 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135438 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 135437 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 135378 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||| | ||||| ||||| || |||||||||||||||||| Sbjct: 135377 agcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcgaga 135318 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 135317 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 135258 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135257 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 135198 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135197 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 135153 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106748 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106807 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106808 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106867 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106868 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106927 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106928 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106987 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106988 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 107047 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||| | ||||| ||||| || |||||||||||||||||| Sbjct: 107048 agcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcgaga 107107 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 107108 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 107167 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107168 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 107227 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107228 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 107272
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 135265 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 135206 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135205 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135146 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135145 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 135086 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135085 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135026 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135025 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 134966 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||| | ||| ||| | || |||||||||||||||||| Sbjct: 134965 agcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgaga 134906 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 134905 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 134846 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134845 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 134786 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134785 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 134741 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 107142 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 107201 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107202 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107261 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107262 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107321 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107322 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107381 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107382 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 107441 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||| | ||| ||| | || |||||||||||||||||| Sbjct: 107442 agcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgaga 107501 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 107502 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 107561 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107562 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 107621 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107622 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 107666
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131853 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 131794 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131793 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 131734 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 131733 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 131674 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131673 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 131614 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 131613 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 131554 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| |||||| ||||| ||||| || |||||||||||||||||| Sbjct: 131553 agcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgaga 131494 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 131493 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 131434 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131433 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 131374 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131373 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 131329 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105016 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 105075 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105076 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 105135 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 105136 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 105195 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 105196 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 105255 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 105256 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 105315 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| |||||| ||||| ||||| || |||||||||||||||||| Sbjct: 105316 agcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgaga 105375 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 105376 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 105435 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105436 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 105495 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105496 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 105540
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 868 bits (438), Expect = 0.0 Identities = 507/530 (95%), Gaps = 5/530 (0%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggcca 55 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 138670 ggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggcca 138611 Query: 56 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138610 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 138551 Query: 116 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 175 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 138550 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 138491 Query: 176 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 235 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 138490 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 138431 Query: 236 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 295 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 138430 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 138371 Query: 296 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 355 |||||||||||||||||||||| |||||| ||||| ||| || || ||||||||||||| Sbjct: 138370 aggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaag 138311 Query: 356 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 415 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 138310 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 138251 Query: 416 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 475 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138250 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 138191 Query: 476 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138190 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggt 138141 Score = 868 bits (438), Expect = 0.0 Identities = 507/530 (95%), Gaps = 5/530 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggcca 55 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 111275 ggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggcca 111334 Query: 56 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 111394 Query: 116 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 175 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 111395 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 111454 Query: 176 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 235 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 111455 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 111514 Query: 236 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 295 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111515 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggt 111574 Query: 296 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 355 |||||||||||||||||||||| |||||| ||||| ||| || || ||||||||||||| Sbjct: 111575 aggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaag 111634 Query: 356 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 415 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 111635 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 111694 Query: 416 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 475 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111695 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 111754 Query: 476 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 111755 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggt 111804 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 436 tccacggagggtgagtcagggcct 459 |||||||||||||||||||||||| Sbjct: 144327 tccacggagggtgagtcagggcct 144304 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 436 tccacggagggtgagtcagggcct 459 |||||||||||||||||||||||| Sbjct: 105618 tccacggagggtgagtcagggcct 105641
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 866 bits (437), Expect = 0.0 Identities = 503/525 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 916 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 975 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1035 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1036 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1095 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1096 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1155 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1156 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaggcatcggtagggg 1215 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||| |||||||| | ||| ||| | ||| |||||||||||||||||| Sbjct: 1216 agcgttccgccttagggggaagcacctgcgcgagcagcggtagacgaagcggaagcgaga 1275 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 1276 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 1335 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1336 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 1395 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1396 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 1440
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 860 bits (434), Expect = 0.0 Identities = 500/522 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 134631 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 134572 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134571 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134512 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134511 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134452 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134451 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134392 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134391 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagggg 134332 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 134331 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 134272 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 134271 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 134212 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134211 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 134152 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134151 gtcgatggacaacaggtgaatattcctgtactaccccttgtt 134110 Score = 860 bits (434), Expect = 0.0 Identities = 500/522 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106405 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106464 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106465 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106524 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106525 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106584 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106585 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106644 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106645 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagggg 106704 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 106705 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 106764 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 106765 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 106824 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106825 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 106884 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 106885 gtcgatggacaacaggtgaatattcctgtactaccccttgtt 106926
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 860 bits (434), Expect = 0.0 Identities = 500/522 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 134766 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 134707 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134706 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134647 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134646 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134587 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134586 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134527 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134526 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagggg 134467 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 134466 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 134407 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 134406 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 134347 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134346 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 134287 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134286 gtcgatggacaacaggtgaatattcctgtactaccccttgtt 134245 Score = 860 bits (434), Expect = 0.0 Identities = 500/522 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106577 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106636 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106637 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106696 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106697 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106756 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106757 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106816 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106817 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagggg 106876 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 106877 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 106936 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 106937 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 106996 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106997 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 107056 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 107057 gtcgatggacaacaggtgaatattcctgtactaccccttgtt 107098
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 860 bits (434), Expect = 0.0 Identities = 500/522 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 134764 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 134705 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134704 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134645 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134644 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134585 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134584 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134525 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134524 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagggg 134465 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 134464 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 134405 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 134404 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 134345 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134344 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 134285 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134284 gtcgatggacaacaggtgaatattcctgtactaccccttgtt 134243 Score = 860 bits (434), Expect = 0.0 Identities = 500/522 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106574 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106633 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106634 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106693 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106694 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106753 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106754 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106813 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106814 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagggg 106873 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 106874 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 106933 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 106934 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 106993 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106994 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 107053 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 107054 gtcgatggacaacaggtgaatattcctgtactaccccttgtt 107095
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 860 bits (434), Expect = 0.0 Identities = 500/522 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 134676 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 134617 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134616 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134557 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134556 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134497 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134496 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134437 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134436 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagggg 134377 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 134376 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 134317 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 134316 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 134257 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134256 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 134197 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134196 gtcgatggacaacaggtgaatattcctgtactaccccttgtt 134155 Score = 860 bits (434), Expect = 0.0 Identities = 500/522 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106452 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106511 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106512 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106571 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106572 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106631 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106632 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106691 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106692 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagggg 106751 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 106752 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 106811 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 106812 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 106871 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106872 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 106931 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 106932 gtcgatggacaacaggtgaatattcctgtactaccccttgtt 106973
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 135385 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 135326 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135325 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135266 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135265 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 135206 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135205 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135146 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 135145 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 135086 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 135085 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 135026 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 135025 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 134966 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134965 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 134906 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 134905 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 134861 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 107245 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 107304 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107305 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107364 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107365 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107424 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107425 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107484 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 107485 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 107544 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 107545 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 107604 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 107605 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 107664 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107665 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 107724 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 107725 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 107769
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 136023 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 135964 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135963 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135904 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135903 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 135844 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135843 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135784 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 135783 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 135724 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||| || ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 135723 agcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 135664 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 135663 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 135604 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135603 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 135544 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 135543 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 135499 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 107534 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 107593 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107594 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107653 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107654 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107713 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107714 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107773 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 107774 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 107833 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||| || ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 107834 agcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 107893 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 107894 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 107953 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107954 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 108013 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 108014 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 108058
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 141964 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 141905 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141904 acgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggccc 141845 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 141844 ctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcct 141785 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 141784 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 141725 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 141724 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 141665 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 141664 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 141605 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 141604 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 141545 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141544 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 141485 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 141484 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 141440 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 111364 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 111423 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111424 acgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggccc 111483 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 111484 ctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcct 111543 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 111544 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 111603 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 111604 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 111663 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 111664 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 111723 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 111724 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 111783 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111784 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 111843 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 111844 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 111888
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 2439 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 2498 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2499 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 2558 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2559 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 2618 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 2619 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 2678 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 2679 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 2738 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 2739 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 2798 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 2799 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 2858 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2859 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 2918 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2919 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 2963
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 135383 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 135324 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135323 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135264 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135263 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 135204 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135203 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135144 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 135143 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 135084 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 135083 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 135024 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 135023 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 134964 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134963 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 134904 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 134903 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 134859 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 107243 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 107302 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107303 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107362 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107363 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107422 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107423 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107482 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 107483 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 107542 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 107543 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 107602 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 107603 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 107662 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107663 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 107722 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 107723 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 107767
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 135114 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 135055 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135054 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134995 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134994 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134935 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134934 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134875 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134874 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 134815 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 134814 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 134755 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 134754 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 134695 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134694 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 134635 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 134634 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 134590 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 107024 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 107083 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107084 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107143 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107144 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107203 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107204 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107263 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 107264 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 107323 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 107324 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 107383 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 107384 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 107443 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107444 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 107503 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 107504 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 107548
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 852 bits (430), Expect = 0.0 Identities = 499/522 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 134643 ggcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgag 134584 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134583 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134524 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134523 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134464 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134463 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134404 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134403 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagggg 134344 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 134343 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 134284 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 134283 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 134224 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134223 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 134164 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134163 gtcgatggacaacaggtgaatattcctgtactaccccttgtt 134122 Score = 852 bits (430), Expect = 0.0 Identities = 499/522 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106419 ggcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106478 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106479 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106538 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106539 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106598 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106599 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106658 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106659 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagggg 106718 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 106719 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 106778 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 106779 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 106838 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106839 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 106898 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 106899 gtcgatggacaacaggtgaatattcctgtactaccccttgtt 106940
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 842 bits (425), Expect = 0.0 Identities = 501/525 (95%), Gaps = 1/525 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 2685 ggcaaactctgaatactagatatgactcaaaa-taacaggggtcaaggtcggctagtgag 2743 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2744 acgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggccc 2803 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2804 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 2863 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| || Sbjct: 2864 agaagcagccacccttgaaagagtgcgtaatagcscactgatcgagcgctcttgcgccga 2923 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 2924 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 2983 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 2984 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 3043 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 3044 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 3103 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3104 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 3163 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 3164 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 3208
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 842 bits (425), Expect = 0.0 Identities = 501/525 (95%), Gaps = 1/525 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 1012 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 1071 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1131 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1132 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1191 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1192 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1251 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1252 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 1311 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 1312 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 1371 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 1372 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 1431 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1432 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc-ta 1490 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1491 gtcgatggacaacaggtgaatattcctgtactgccccttgttggt 1535
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 835 bits (421), Expect = 0.0 Identities = 499/525 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||| Sbjct: 129615 ggcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgag 129556 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 129555 acgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 129496 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 129495 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 129436 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 129435 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 129376 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 129375 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtagggg 129316 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||| | ||||| ||| | ||| |||||||||||||||||| Sbjct: 129315 agcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcgaga 129256 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||| || Sbjct: 129255 atgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaagggtt 129196 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129195 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 129136 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 129135 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 129091 Score = 835 bits (421), Expect = 0.0 Identities = 499/525 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||| Sbjct: 102841 ggcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgag 102900 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 102901 acgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 102960 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 102961 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 103020 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 103021 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 103080 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 103081 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtagggg 103140 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||| | ||||| ||| | ||| |||||||||||||||||| Sbjct: 103141 agcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcgaga 103200 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||| || Sbjct: 103201 atgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaagggtt 103260 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103261 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 103320 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103321 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 103365
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 827 bits (417), Expect = 0.0 Identities = 498/525 (94%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 130952 ggcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgag 130893 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130892 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 130833 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 130832 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcct 130773 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 130772 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 130713 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| Sbjct: 130712 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtagggg 130653 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||| | ||||| ||| | | | |||||||||||||||||| Sbjct: 130652 agcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcgaga 130593 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| || Sbjct: 130592 atgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggtt 130533 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 130532 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaagggcgta 130473 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 130472 gtcgatggacaacaggtgaatattcctgtactaccctttgttggt 130428 Score = 827 bits (417), Expect = 0.0 Identities = 498/525 (94%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 104442 ggcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgag 104501 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104502 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 104561 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 104562 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcct 104621 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104622 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 104681 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| Sbjct: 104682 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtagggg 104741 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||| | ||||| ||| | | | |||||||||||||||||| Sbjct: 104742 agcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcgaga 104801 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| || Sbjct: 104802 atgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggtt 104861 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 104862 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaagggcgta 104921 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 104922 gtcgatggacaacaggtgaatattcctgtactaccctttgttggt 104966
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 823 bits (415), Expect = 0.0 Identities = 498/525 (94%), Gaps = 8/525 (1%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 134069 ggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtgag 134017 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134016 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 133957 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 133956 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 133897 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 133896 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 133837 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 133836 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 133777 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||| ||||||||||||| ||||| ||| || || |||||||||||||||||| Sbjct: 133776 agcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcgaga 133718 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 133717 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 133658 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133657 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 133598 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133597 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 133553 Score = 823 bits (415), Expect = 0.0 Identities = 498/525 (94%), Gaps = 8/525 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 106213 ggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtgag 106265 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106266 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106325 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106326 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106385 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106386 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106445 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 106446 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 106505 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||| ||||||||||||| ||||| ||| || || |||||||||||||||||| Sbjct: 106506 agcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcgaga 106564 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 106565 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 106624 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106625 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 106684 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106685 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 106729
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 809 bits (408), Expect = 0.0 Identities = 408/408 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526554 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 33526613 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526614 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 33526673 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526674 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 33526733 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526734 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 33526793 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526794 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 33526853 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526854 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 33526913 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 408 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526914 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 33526961 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 73 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 132 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 133 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 192 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 193 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 253 ctaagcgatctgccgaagctgtgggatgtcaaaat 287 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 141 bits (71), Expect = 3e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 413 caaggtttcctccgcaaggttcgtcca 439 || |||||||||||||||||||||||| Sbjct: 1076660 cagggtttcctccgcaaggttcgtcca 1076634 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 220 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 261 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 289 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 348 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 349 gcggaagcgagaatgtcggcttgagtaac 377 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 369 ttgagtaacgaaaacattggtgagaatc 396 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 gatcaggccgaaaggcgtag 481 |||||||||||||||||||| Sbjct: 41814858 gatcaggccgaaaggcgtag 41814877
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 809 bits (408), Expect = 0.0 Identities = 408/408 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71751 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 71810 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71811 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 71870 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71871 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 71930 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71931 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 71990 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71991 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 72050 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72051 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 72110 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 408 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72111 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 369 ttgagtaacgaaaacattggtgagaatc 396 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 797 bits (402), Expect = 0.0 Identities = 493/522 (94%), Gaps = 1/522 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1410 ggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgag 1469 Query: 61 acgatggggg-ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 119 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 acgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 1529 Query: 120 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 179 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 1530 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 1589 Query: 180 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 239 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 1590 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 1649 Query: 240 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 299 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1650 aagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatcggtaggg 1709 Query: 300 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 359 |||||||||| |||| |||||||| | ||| ||| | ||||||||||||||||| Sbjct: 1710 gagcgttccgtgttagggggaagcatcggcgcgagccatgccagacgaagcggaagcgag 1769 Query: 360 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 419 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 1770 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 1829 Query: 420 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1830 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 1889 Query: 480 agtcgatggacaacaggtcaatattcctgtactaccccttgt 521 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1890 agtcgatggacaacaggtgaatattcctgtactaccccttgt 1931
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 64 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 124 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 184 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 244 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 304 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 364 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 63530 Query: 424 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 463 |||||||||||||||||||||||||||||||||||||||| Sbjct: 63529 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 63490
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 789 bits (398), Expect = 0.0 Identities = 495/526 (94%), Gaps = 1/526 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagtga 59 ||||||||||||||||||||||||| || |||||||||||| | |||||| ||||||| Sbjct: 918 ggcaaactctgaatactagatatgatccccaaataacaggggataaaggtcaaccagtga 977 Query: 60 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 119 |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 978 gacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcc 1037 Query: 120 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 179 ||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||| Sbjct: 1038 cctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcc 1097 Query: 180 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 239 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 1098 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccg 1157 Query: 240 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 299 |||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1158 aagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggg 1217 Query: 300 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 359 ||||||||||||||||||||||||| | ||| ||| || || ||||||||||||||||| Sbjct: 1218 gagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgag 1277 Query: 360 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 419 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 1278 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 1337 Query: 420 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1338 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 1397 Query: 480 agtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1398 agtcgatggacaacaggtgaatattcctgtactaccccttgttggt 1443
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 781 bits (394), Expect = 0.0 Identities = 495/526 (94%), Gaps = 2/526 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| Sbjct: 932 ggcaaactctgaatactagatatgacctaaaaataacaagggtcaaggtcggcaagtgag 991 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 992 acgatgggggataagcttcatcgtcgagagggaaacagccctgatcacccgctaaggccc 1051 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| | Sbjct: 1052 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc-t 1110 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1111 ataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1170 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1171 agatgaacggggctaagtgatctgccgaagctgtgggatgtaaaaaggcatcggtagggg 1230 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||| ||||| |||||||| | ||| ||| | ||| |||||||||||||||||| Sbjct: 1231 agcgttccgtcttagggggaagcacctgcgcgagcagtggtagacgaagcggaagcgaga 1290 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 1291 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 1350 Query: 421 cctccgcaaggttcgtccacgg-agggtgagtcagggcctaagatcaggccgaaaggcgt 479 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1351 cctccgcaaggttcgtccacggtagggtgagtcagggcctaagatcaggccgaaaggcgt 1410 Query: 480 agtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1411 agtcgatggacaacaggtgaatattcctgtactgccccttgttggt 1456
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 773 bits (390), Expect = 0.0 Identities = 390/390 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 779 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 839 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 899 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 959 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1019 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 1079 Query: 361 atgtcggcttgagtaacgaaaacattggtg 390 |||||||||||||||||||||||||||||| Sbjct: 1080 atgtcggcttgagtaacgaaaacattggtg 1109
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 771 bits (389), Expect = 0.0 Identities = 468/494 (94%), Gaps = 9/494 (1%) Strand = Plus / Minus Query: 41 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139412 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 139353 Query: 101 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 160 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 139352 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 139293 Query: 161 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 139292 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 139233 Query: 221 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat- 279 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139232 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 139173 Query: 280 ------gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaa 333 || |||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 139172 taaaaagtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcga 139113 Query: 334 gc--gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtga 391 || | | || |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139112 gcaggcgtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtga 139053 Query: 392 gaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagt 451 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 139052 gaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagt 138993 Query: 452 cagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 138992 cagggcctaagatcaggccgaaaggcgtagtcgatgggcaacaggtgaatattcctgtac 138933 Query: 512 taccccttgttggt 525 |||||||||||||| Sbjct: 138932 taccccttgttggt 138919 Score = 771 bits (389), Expect = 0.0 Identities = 468/494 (94%), Gaps = 9/494 (1%) Strand = Plus / Plus Query: 41 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110648 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 110707 Query: 101 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 160 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 110708 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 110767 Query: 161 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 110768 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 110827 Query: 221 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat- 279 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110828 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 110887 Query: 280 ------gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaa 333 || |||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 110888 taaaaagtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcga 110947 Query: 334 gc--gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtga 391 || | | || |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110948 gcaggcgtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtga 111007 Query: 392 gaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagt 451 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 111008 gaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagt 111067 Query: 452 cagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 111068 cagggcctaagatcaggccgaaaggcgtagtcgatgggcaacaggtgaatattcctgtac 111127 Query: 512 taccccttgttggt 525 |||||||||||||| Sbjct: 111128 taccccttgttggt 111141
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 769 bits (388), Expect = 0.0 Identities = 391/392 (99%) Strand = Plus / Plus Query: 140 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 200 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 260 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 320 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 380 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 300 Query: 440 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtca 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 301 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacgggtca 360 Query: 500 atattcctgtactaccccttgttggtacggag 531 |||||||||||||||||||||||||||||||| Sbjct: 361 atattcctgtactaccccttgttggtacggag 392
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 765 bits (386), Expect = 0.0 Identities = 492/526 (93%), Gaps = 1/526 (0%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaa-ggtcggccagtga 59 ||||||||||||||||||||||||| || |||||| ||||| || |||| ||||||| Sbjct: 117231 ggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagtga 117172 Query: 60 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 119 |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 117171 gacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcc 117112 Query: 120 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 179 |||||||||||||| |||| |||||||||| || |||||||||||||||||||||||||| Sbjct: 117111 cctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcc 117052 Query: 180 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 239 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 117051 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccg 116992 Query: 240 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 299 |||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 116991 aagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggg 116932 Query: 300 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 359 ||||||||||||||||||||||||| | ||| ||| || || ||||||||||||||||| Sbjct: 116931 gagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgag 116872 Query: 360 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 419 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 116871 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 116812 Query: 420 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116811 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 116752 Query: 480 agtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 116751 agtcgatggacaacaggtgaatattcctgtactaccccttgttggt 116706 Score = 765 bits (386), Expect = 0.0 Identities = 492/526 (93%), Gaps = 1/526 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaa-ggtcggccagtga 59 ||||||||||||||||||||||||| || |||||| ||||| || |||| ||||||| Sbjct: 90871 ggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagtga 90930 Query: 60 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 119 |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 90931 gacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcc 90990 Query: 120 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 179 |||||||||||||| |||| |||||||||| || |||||||||||||||||||||||||| Sbjct: 90991 cctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcc 91050 Query: 180 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 239 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 91051 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccg 91110 Query: 240 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 299 |||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 91111 aagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggg 91170 Query: 300 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 359 ||||||||||||||||||||||||| | ||| ||| || || ||||||||||||||||| Sbjct: 91171 gagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgag 91230 Query: 360 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 419 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 91231 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 91290 Query: 420 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91291 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 91350 Query: 480 agtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 91351 agtcgatggacaacaggtgaatattcctgtactaccccttgttggt 91396
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 749 bits (378), Expect = 0.0 Identities = 453/478 (94%) Strand = Plus / Plus Query: 48 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 108 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 167 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 168 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 227 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 228 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 287 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 288 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 347 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 5422 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 5481 Query: 348 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 407 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5482 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 5541 Query: 408 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 467 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5542 aaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 5601 Query: 468 gccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 5602 gccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggt 5659 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatat 23 ||||||||||||||||||||||| Sbjct: 5145 ggcaaactctgaatactagatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 749 bits (378), Expect = 0.0 Identities = 453/478 (94%) Strand = Plus / Minus Query: 48 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 108 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 167 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 168 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 227 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 228 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 287 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 288 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 347 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 22503 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 22444 Query: 348 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 407 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22443 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 22384 Query: 408 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 467 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22383 aaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 22324 Query: 468 gccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 22323 gccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggt 22266 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatat 23 ||||||||||||||||||||||| Sbjct: 22780 ggcaaactctgaatactagatat 22758
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 743 bits (375), Expect = 0.0 Identities = 485/519 (93%), Gaps = 2/519 (0%) Strand = Plus / Minus Query: 2 gcaaactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||| ||||||| | |||||| |||||| |||||||||||||||| Sbjct: 51770 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 51711 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51710 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 51651 Query: 121 ctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcc 179 |||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 51650 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcc 51591 Query: 180 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 239 ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| | Sbjct: 51590 tagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccg 51531 Query: 240 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 299 || ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 51530 aatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggg 51471 Query: 300 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 359 |||||||||||||||||||||||| | || ||| | ||| ||||||||||||||||| Sbjct: 51470 gagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgag 51411 Query: 360 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 419 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 51410 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 51351 Query: 420 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51350 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 51291 Query: 480 agtcgatggacaacaggtcaatattcctgtactacccct 518 |||| ||||||||||||| |||||||||||||||||||| Sbjct: 51290 agtcaatggacaacaggtgaatattcctgtactacccct 51252 Score = 743 bits (375), Expect = 0.0 Identities = 485/519 (93%), Gaps = 2/519 (0%) Strand = Plus / Plus Query: 2 gcaaactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||| ||||||| | |||||| |||||| |||||||||||||||| Sbjct: 38058 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 38117 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38118 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 38177 Query: 121 ctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcc 179 |||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 38178 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcc 38237 Query: 180 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 239 ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| | Sbjct: 38238 tagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccg 38297 Query: 240 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 299 || ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 38298 aatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggg 38357 Query: 300 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 359 |||||||||||||||||||||||| | || ||| | ||| ||||||||||||||||| Sbjct: 38358 gagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgag 38417 Query: 360 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 419 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 38418 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 38477 Query: 420 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38478 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 38537 Query: 480 agtcgatggacaacaggtcaatattcctgtactacccct 518 |||| ||||||||||||| |||||||||||||||||||| Sbjct: 38538 agtcaatggacaacaggtgaatattcctgtactacccct 38576
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 743 bits (375), Expect = 0.0 Identities = 489/525 (93%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||| || ||| ||||| |||||| | |||| |||||||| Sbjct: 87181 ggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagtgag 87236 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 87237 acgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggccc 87296 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||| ||||| || | ||||||||||||||||||||||||||| Sbjct: 87297 ctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttgcct 87356 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 87357 agaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 87416 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87417 agatgaacgggactaagcgatctgccgaagctgtgggatgtcaaaatacatcggtagggg 87476 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||| |||| |||||| | ||| ||| || || |||||||||||||||||| Sbjct: 87477 agcgttccgcctcagagagaagcaccggcgcgagcaggtgtggacgaagcggaagcgaga 87536 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 87537 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 87596 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87597 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 87656 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87657 gtcgatggacaacaggtgaatattcctgtactaccccttgttggt 87701
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 743 bits (375), Expect = 0.0 Identities = 460/487 (94%), Gaps = 1/487 (0%) Strand = Plus / Plus Query: 40 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 98 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 99 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 158 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 159 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 218 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 219 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 278 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 279 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 338 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 339 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 398 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 399 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 458 |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 5805 atgccccgaaaacctaaggattcctccgcaaggttcgtccacggagggtaagtcaggacc 5864 Query: 459 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 518 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 5865 taagatcaggccgaaaggcgtagtcgatggacaacaggttaatattcctgtactgcccct 5924 Query: 519 tgttggt 525 ||||||| Sbjct: 5925 tgttggt 5931 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgaccc 28 |||||||||||||||||||||||||||| Sbjct: 5413 ggcaaactctgaatactagatatgaccc 5440
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 743 bits (375), Expect = 0.0 Identities = 485/519 (93%), Gaps = 2/519 (0%) Strand = Plus / Plus Query: 2 gcaaactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||| ||||||| | |||||| |||||| |||||||||||||||| Sbjct: 4986 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 5045 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5046 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 5105 Query: 121 ctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcc 179 |||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 5106 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcc 5165 Query: 180 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 239 ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| | Sbjct: 5166 tagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccg 5225 Query: 240 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 299 || ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 5226 aatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggg 5285 Query: 300 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 359 |||||||||||||||||||||||| | || ||| | ||| ||||||||||||||||| Sbjct: 5286 gagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgag 5345 Query: 360 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 419 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 5346 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 5405 Query: 420 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5406 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 5465 Query: 480 agtcgatggacaacaggtcaatattcctgtactacccct 518 |||| ||||||||||||| |||||||||||||||||||| Sbjct: 5466 agtcaatggacaacaggtgaatattcctgtactacccct 5504
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 743 bits (375), Expect = 0.0 Identities = 460/487 (94%), Gaps = 1/487 (0%) Strand = Plus / Plus Query: 40 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 98 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 99 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 158 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 159 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 218 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 219 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 278 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 279 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 338 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 339 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 398 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 399 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 458 |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 5805 atgccccgaaaacctaaggattcctccgcaaggttcgtccacggagggtaagtcaggacc 5864 Query: 459 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 518 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 5865 taagatcaggccgaaaggcgtagtcgatggacaacaggttaatattcctgtactgcccct 5924 Query: 519 tgttggt 525 ||||||| Sbjct: 5925 tgttggt 5931 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgaccc 28 |||||||||||||||||||||||||||| Sbjct: 5413 ggcaaactctgaatactagatatgaccc 5440
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 728 bits (367), Expect = 0.0 Identities = 489/527 (92%), Gaps = 2/527 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg-tcggccagtga 59 ||||||||||||||||||||||||| | |||||| |||| |||| || ||||||| Sbjct: 918 ggcaaactctgaatactagatatgatctccgaataacgggggataagggtcaaccagtga 977 Query: 60 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 119 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 978 gacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcc 1037 Query: 120 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 179 ||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||| Sbjct: 1038 cctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcc 1097 Query: 180 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 239 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 1098 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccg 1157 Query: 240 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 299 |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 1158 aagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggg 1217 Query: 300 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 359 |||||||||||||||| |||||||| | ||| ||| || || ||||||||||||||||| Sbjct: 1218 gagcgttccgccttagggggaagcaccagcgcgagcaggtgtggacgaagcggaagcgag 1277 Query: 360 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 419 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 1278 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 1337 Query: 420 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1338 tcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgt 1397 Query: 480 agtcgatggacaacaggtcaatattcctgtacta-ccccttgttggt 525 |||||||||||||||||| ||||||||||||| | |||||||||||| Sbjct: 1398 agtcgatggacaacaggtgaatattcctgtaccacccccttgttggt 1444
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 724 bits (365), Expect = 0.0 Identities = 437/461 (94%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 912 ggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgag 971 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1031 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1032 ctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcct 1091 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1092 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1151 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1152 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtagggg 1211 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||| ||||||||||||||| ||| |||| |||||||||||||||| | Sbjct: 1212 agcgttccgccttaaagggaagcaaccgcgccagcaagggtggacgaagcggaagcgaaa 1271 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 ||||| |||||||||||| ||||||||||||||||| |||||||| |||| | |||| || Sbjct: 1272 atgtccgcttgagtaacgcaaacattggtgagaatctaatgcccccaaaaactaagggtt 1331 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaa 461 ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1332 cctccgcaaggttcgtccacggagggtgagtcaaggcctaa 1372
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 724 bits (365), Expect = 0.0 Identities = 494/531 (93%), Gaps = 12/531 (2%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 376 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 435 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 495 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||| Sbjct: 496 ctaaatgatcgctcagtgataaaggaggtaggggtgcga-gacagccaggaggtttgcct 554 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 555 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 614 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 615 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 674 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||| Sbjct: 675 agcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgaga 734 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 ||||| | ||||| | ||||||||||||||||||||||||||||||||| |||| || Sbjct: 735 atgtc-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaacctaagggtt 790 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaa----ga--tcaggccgaaa 474 ||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| Sbjct: 791 cctccgcaaggttcgtccacggagggtgagtcagggcctaaacgtgacgtca-gccgaaa 849 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 850 ggcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggt 900
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 724 bits (365), Expect = 0.0 Identities = 446/473 (94%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 89316 ccagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagc 89375 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||||||||||||||||||| ||||| || | ||||||||||||||||||| Sbjct: 89376 taaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggag 89435 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 89436 gtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcg 89495 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 292 ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| Sbjct: 89496 tgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtaaaaatacatc 89555 Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 |||||||||||||||||||| ||||||||||| | ||| ||| || || |||||||||| Sbjct: 89556 ggtaggggagcgttccgcctcagagggaagcaccggcgcgagcaggtgtggacgaagcgg 89615 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 89616 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 89675 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89676 taagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 89735 Query: 473 aaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 89736 aaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggt 89788
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 714 bits (360), Expect = 0.0 Identities = 490/531 (92%), Gaps = 8/531 (1%) Strand = Plus / Plus Query: 2 gcaaactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| Sbjct: 915 gcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgag 974 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 975 acgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 1034 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||| ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1035 ctaattgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1094 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||| || Sbjct: 1095 agaagcagccacccttgaaatagtgcgtaatagcttactgatcgagcgctcttgcgccga 1154 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatg------tcaaaatgcatcgg 294 |||| ||||||||||||||||| ||||||||||||||||| | ||||| |||||| Sbjct: 1155 agattaacggggctaagcgatccgccgaagctgtgggatgtaaaaataaaaatacatcgg 1214 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 ||||||||||||||||||||||||||||| | || ||| | ||| |||||| ||||| Sbjct: 1215 taggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaaacggaa 1274 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1275 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1334 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 1394 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 | ||||||||||| |||||||| |||||| |||||||||||||||||||| Sbjct: 1395 cg-gtagtcgatgggcaacaggtgaatatttctgtactaccccttgttggt 1444
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Minus Query: 166 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 226 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 286 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 346 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 405 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 406 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 465 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 20630 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 20571 Query: 466 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20570 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 20511 Query: 526 acggag 531 |||||| Sbjct: 20510 acggag 20505
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 704 bits (355), Expect = 0.0 Identities = 439/467 (94%) Strand = Plus / Plus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 286 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 287 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 346 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 5098 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 5157 Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5158 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5217 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5218 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5277 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5278 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtacta 5324 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatg 24 ||||||||||||||||||| |||| Sbjct: 4807 ggcaaactctgaatactaggtatg 4830
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 704 bits (355), Expect = 0.0 Identities = 439/467 (94%) Strand = Plus / Plus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 286 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 287 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 346 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1387 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1388 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtacta 1434 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatg 24 ||||||||||||||||||| |||| Sbjct: 917 ggcaaactctgaatactaggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 704 bits (355), Expect = 0.0 Identities = 439/467 (94%) Strand = Plus / Minus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 286 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 287 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 346 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 150037 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 149978 Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 149977 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 149918 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149917 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 149858 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 149857 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtacta 149811 Score = 704 bits (355), Expect = 0.0 Identities = 439/467 (94%) Strand = Plus / Plus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 286 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 287 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 346 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 118629 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 118688 Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118689 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 118748 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118749 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 118808 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 118809 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtacta 118855 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatg 24 ||||||||||||||||||| |||| Sbjct: 150328 ggcaaactctgaatactaggtatg 150305 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatg 24 ||||||||||||||||||| |||| Sbjct: 118338 ggcaaactctgaatactaggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 704 bits (355), Expect = 0.0 Identities = 439/467 (94%) Strand = Plus / Plus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 286 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 287 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 346 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1387 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1388 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtacta 1434 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatg 24 ||||||||||||||||||| |||| Sbjct: 917 ggcaaactctgaatactaggtatg 940
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 690 bits (348), Expect = 0.0 Identities = 430/455 (94%), Gaps = 3/455 (0%) Strand = Plus / Plus Query: 71 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 131 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 190 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 191 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 250 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 251 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 310 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 311 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 370 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 371 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 430 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaag 615 Query: 431 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 490 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 616 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaa--cgtagtcgatggac 673 Query: 491 aacaggtcaatattcctgtactaccccttgttggt 525 ||||||| |||||||||||||||||| |||||||| Sbjct: 674 aacaggtgaatattcctgtactaccctttgttggt 708
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 688 bits (347), Expect = 0.0 Identities = 447/479 (93%), Gaps = 1/479 (0%) Strand = Plus / Minus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 286 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 287 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 346 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 115006 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 114948 Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114947 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 114888 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114887 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 114828 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114827 ggccgaaaggcgtagtcgatggacaacaggcaaatattcctgtactaccccttgttggt 114769 Score = 688 bits (347), Expect = 0.0 Identities = 447/479 (93%), Gaps = 1/479 (0%) Strand = Plus / Plus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 286 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 287 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 346 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 87114 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 87172 Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87173 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 87232 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87233 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 87292 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87293 ggccgaaaggcgtagtcgatggacaacaggcaaatattcctgtactaccccttgttggt 87351
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 686 bits (346), Expect = 0.0 Identities = 487/531 (91%), Gaps = 6/531 (1%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacc--caaa---aataacagg-ggtcaaggtcggcc 54 ||||||||||||||||||| ||||| | |||| || |||||| ||| |||||| ||| Sbjct: 145641 ggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagcc 145582 Query: 55 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 114 ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 145581 agtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagcta 145522 Query: 115 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 174 |||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| || Sbjct: 145521 aggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagt 145462 Query: 175 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 234 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 145461 ttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttg 145402 Query: 235 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 294 ||| ||| ||||||||| ||||||| |||||||||||||||||||||||||| |||||| Sbjct: 145401 cgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcgg 145342 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 |||||||||||||||||||||||||||||| | ||| ||| || || ||| |||||||| Sbjct: 145341 taggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaa 145282 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 145281 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 145222 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 145221 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaa 145162 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 145161 ggcgtagttgatggacaacaggtgaatattcctgtactaccccttgttggt 145111 Score = 686 bits (346), Expect = 0.0 Identities = 487/531 (91%), Gaps = 6/531 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacc--caaa---aataacagg-ggtcaaggtcggcc 54 ||||||||||||||||||| ||||| | |||| || |||||| ||| |||||| ||| Sbjct: 112821 ggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagcc 112880 Query: 55 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 114 ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 112881 agtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagcta 112940 Query: 115 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 174 |||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| || Sbjct: 112941 aggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagt 113000 Query: 175 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 234 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 113001 ttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttg 113060 Query: 235 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 294 ||| ||| ||||||||| ||||||| |||||||||||||||||||||||||| |||||| Sbjct: 113061 cgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcgg 113120 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 |||||||||||||||||||||||||||||| | ||| ||| || || ||| |||||||| Sbjct: 113121 taggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaa 113180 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 113181 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 113240 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 113241 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaa 113300 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113301 ggcgtagttgatggacaacaggtgaatattcctgtactaccccttgttggt 113351
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 676 bits (341), Expect = 0.0 Identities = 440/473 (93%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 292 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 ||||||||||||||||||||||||| ||||| | ||| ||| || || |||||||||| Sbjct: 1195 ggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcgg 1254 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1255 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1314 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1315 taagggttcctctgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccaa 1374 Query: 473 aaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1375 aaggcgtagtcgatggacaacaggcgaatattcctgtactaccccttgttggt 1427
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 668 bits (337), Expect = 0.0 Identities = 439/473 (92%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| |||||||||| |||||||| ||||||| || Sbjct: 975 ccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccggc 1034 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||||| Sbjct: 1035 taaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggag 1094 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1095 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1154 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 292 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1155 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1214 Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 ||||||||||||||||||||||| | |||||| | ||| ||| || || |||||||||| Sbjct: 1215 ggtaggggagcgttccgccttagggagaagcaccagcgtgagcaggtgtggacgaagcgg 1274 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1275 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1334 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1335 taagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 1394 Query: 473 aaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 1395 aaggcgtagtcgatggacaacaggcgaatattcctgtactaccccttgctggt 1447
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 658 bits (332), Expect = 0.0 Identities = 335/336 (99%) Strand = Plus / Plus Query: 196 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 256 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 316 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 376 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 240 Query: 436 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacag 495 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 241 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgacggacaacag 300 Query: 496 gtcaatattcctgtactaccccttgttggtacggag 531 |||||||||||||||||||||||||||||||||||| Sbjct: 301 gtcaatattcctgtactaccccttgttggtacggag 336
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 652 bits (329), Expect = 0.0 Identities = 437/473 (92%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 292 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 145139 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 145198 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145199 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 145258 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 145259 taagggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccga 145318 Query: 473 aaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||| |||||||||| ||| |||||||| ||||| |||||||||||| Sbjct: 145319 gaggcgtagttgatggacaacgggttaatattcccgtactgccccttgttggt 145371 Score = 652 bits (329), Expect = 0.0 Identities = 437/473 (92%) Strand = Plus / Minus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 292 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 87712 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 87653 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87652 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 87593 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 87592 taagggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccga 87533 Query: 473 aaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||| |||||||||| ||| |||||||| ||||| |||||||||||| Sbjct: 87532 gaggcgtagttgatggacaacgggttaatattcccgtactgccccttgttggt 87480 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagat 21 ||||||||||||||||||||| Sbjct: 144840 ggcaaactctgaatactagat 144860 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagat 21 ||||||||||||||||||||| Sbjct: 88011 ggcaaactctgaatactagat 87991
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 644 bits (325), Expect = 0.0 Identities = 475/525 (90%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||| |||||||| || ||| ||| | |||| |||||||| Sbjct: 127523 ggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgag 127464 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| Sbjct: 127463 acgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggccc 127404 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||| |||||||| |||||||||| || ||||||||||||||||||||||||||| Sbjct: 127403 ctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcct 127344 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 127343 agaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttacgccga 127284 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 | ||||||||| ||||| | ||||||||||||||| ||||||||| |||||||||||| Sbjct: 127283 aaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtagggg 127224 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||| | ||| |||||| ||| ||| || || |||||||||||||||||| Sbjct: 127223 agcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgaga 127164 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 127163 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 127104 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127103 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 127044 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 127043 gtcgatggacaacaggtgaatattcctgtactactccttgttggt 126999 Score = 644 bits (325), Expect = 0.0 Identities = 475/525 (90%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||| |||||||| || ||| ||| | |||| |||||||| Sbjct: 95924 ggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgag 95983 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| Sbjct: 95984 acgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggccc 96043 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||| |||||||| |||||||||| || ||||||||||||||||||||||||||| Sbjct: 96044 ctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcct 96103 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 96104 agaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttacgccga 96163 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 | ||||||||| ||||| | ||||||||||||||| ||||||||| |||||||||||| Sbjct: 96164 aaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtagggg 96223 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 ||||||||| | ||| |||||| ||| ||| || || |||||||||||||||||| Sbjct: 96224 agcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgaga 96283 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || Sbjct: 96284 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggtt 96343 Query: 421 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96344 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 96403 Query: 481 gtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 96404 gtcgatggacaacaggtgaatattcctgtactactccttgttggt 96448
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 640 bits (323), Expect = e-180 Identities = 326/327 (99%) Strand = Plus / Plus Query: 205 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 265 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 325 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 385 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 240 Query: 445 ggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 504 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggtgagtcagggcctaggatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 300 Query: 505 cctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||| Sbjct: 301 cctgtactaccccttgttggtacggag 327
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 636 bits (321), Expect = e-179 Identities = 321/321 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 598 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 658 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 718 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 778 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 838 Query: 301 agcgttccgccttagagggaa 321 ||||||||||||||||||||| Sbjct: 839 agcgttccgccttagagggaa 859
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 634 bits (320), Expect = e-179 Identities = 376/392 (95%), Gaps = 2/392 (0%) Strand = Plus / Plus Query: 134 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 193 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 194 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 253 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 254 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 313 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc-tt 178 Query: 314 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 373 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 374 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggtt 433 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggtt 298 Query: 434 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 358 Query: 494 aggtcaatattcctgtactaccccttgttggt 525 ||| ||||||||||||||||||||||||||| Sbjct: 359 aggcgaatattcctgtactaccccttgttggt 390
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 626 bits (316), Expect = e-176 Identities = 434/467 (92%), Gaps = 6/467 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1054 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1055 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1114 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1115 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1174 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1175 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 1234 Query: 301 agcgttccgccttagagggaagcaac--cgcgaaagcgggggtcgacgaagcgg-aagcg 357 |||||||||||||| | |||| || | |||||| |||| | |||||| ||| || | Sbjct: 1235 agcgttccgccttaaaaggaaacacccgcgcgaacaaggggttggacgaaacggaaacca 1294 Query: 358 agaatgtcggcttgagtaacg-aaaaca-ttggtgagaatccaatgccccgaaaacccaa 415 ||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| || Sbjct: 1295 agaatgtcggcttgagtaacgcaaaacatttggtgagaatctaatgccccgaaaacctaa 1354 Query: 416 ggtttcctccgc-aaggttcgtccacggagggtgagtcagggcctaa 461 | ||||||| | |||||||||||||||||||||||||| ||||||| Sbjct: 1355 aggttcctccccaaaggttcgtccacggagggtgagtcaaggcctaa 1401
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 609 bits (307), Expect = e-171 Identities = 424/462 (91%), Gaps = 2/462 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 289 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 290 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 349 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 1252 Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1312 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1313 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggc 1372 Query: 470 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 1373 cgaaaggcgcagtcgatggacaacaggttaatattcctgtac 1414
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 607 bits (306), Expect = e-170 Identities = 435/477 (91%), Gaps = 2/477 (0%) Strand = Plus / Plus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 284 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 285 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 344 | ||||||||||||||||||||||| | | |||||| | | | || | || || || Sbjct: 1303 agggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtgga 1362 Query: 345 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 404 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1363 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1422 Query: 405 cgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 464 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1423 cgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagat 1482 Query: 465 caggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgt 521 || |||||| |||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1483 catgccgaacggcgcagtcgatggacaacaggtcaagattcctgtactaccccttgt 1539
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 603 bits (304), Expect = e-169 Identities = 433/475 (91%), Gaps = 2/475 (0%) Strand = Plus / Plus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 284 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 285 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 344 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1186 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1245 Query: 345 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 404 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1246 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1305 Query: 405 cgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 464 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1306 cgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagat 1365 Query: 465 caggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 519 || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 1366 catgccgaacggcgcagtcgatggacaacaggtcaagattcctgtactactcctt 1420
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 603 bits (304), Expect = e-169 Identities = 433/475 (91%), Gaps = 2/475 (0%) Strand = Plus / Plus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 284 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 285 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 344 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1199 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1258 Query: 345 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 404 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1259 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1318 Query: 405 cgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 464 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1319 cgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagat 1378 Query: 465 caggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 519 || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 1379 catgccgaacggcgcagtcgatggacaacaggtcaagattcctgtactactcctt 1433
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 599 bits (302), Expect = e-168 Identities = 445/491 (90%), Gaps = 5/491 (1%) Strand = Plus / Minus Query: 40 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 99 |||| ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||| Sbjct: 138309 gggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagc 138250 Query: 100 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 159 || |||||||||||||||||||| ||||||||||||||| | |||||||| || |||||| Sbjct: 138249 ccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaa 138190 Query: 160 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 219 |||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||| Sbjct: 138189 agacagccgggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcact 138130 Query: 220 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||| ||||| | ||||| || |||||||||| ||||||| ||||||||||||||||||| Sbjct: 138129 gatcaagcgctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggat 138070 Query: 280 gtc--aaaatgcatcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaag 334 ||| | ||| |||||||||||||||||||||||| |||||||||| | ||| || Sbjct: 138069 gtcgaacaatacatcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgag 138010 Query: 335 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 394 | || | |||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 138009 caggtgcggacgaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaa 137950 Query: 395 tccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcag 454 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 137949 tccaatgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcag 137890 Query: 455 ggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 514 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 137889 ggcctaagatcaggccgagaggcgtagtcgatggacaacaggcgaatattcctgtactac 137830 Query: 515 cccttgttggt 525 || | |||||| Sbjct: 137829 ccatcgttggt 137819 Score = 599 bits (302), Expect = e-168 Identities = 445/491 (90%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 40 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 99 |||| ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||| Sbjct: 83568 gggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagc 83627 Query: 100 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 159 || |||||||||||||||||||| ||||||||||||||| | |||||||| || |||||| Sbjct: 83628 ccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaa 83687 Query: 160 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 219 |||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||| Sbjct: 83688 agacagccgggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcact 83747 Query: 220 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||| ||||| | ||||| || |||||||||| ||||||| ||||||||||||||||||| Sbjct: 83748 gatcaagcgctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggat 83807 Query: 280 gtc--aaaatgcatcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaag 334 ||| | ||| |||||||||||||||||||||||| |||||||||| | ||| || Sbjct: 83808 gtcgaacaatacatcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgag 83867 Query: 335 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 394 | || | |||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 83868 caggtgcggacgaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaa 83927 Query: 395 tccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcag 454 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 83928 tccaatgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcag 83987 Query: 455 ggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 514 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 83988 ggcctaagatcaggccgagaggcgtagtcgatggacaacaggcgaatattcctgtactac 84047 Query: 515 cccttgttggt 525 || | |||||| Sbjct: 84048 ccatcgttggt 84058
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 593 bits (299), Expect = e-166 Identities = 422/462 (91%), Gaps = 2/462 (0%) Strand = Plus / Minus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 289 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 124073 Query: 290 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 349 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 124072 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 124013 Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124012 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 123953 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123952 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggc 123893 Query: 470 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 123892 cgaaaggcgcagtcgatggacaacaggtgaatattcctgtac 123851 Score = 593 bits (299), Expect = e-166 Identities = 422/462 (91%), Gaps = 2/462 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 289 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 95793 Query: 290 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 349 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 95794 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 95853 Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95854 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 95913 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95914 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggc 95973 Query: 470 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 95974 cgaaaggcgcagtcgatggacaacaggtgaatattcctgtac 96015
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 587 bits (296), Expect = e-164 Identities = 436/480 (90%), Gaps = 2/480 (0%) Strand = Plus / Minus Query: 47 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 107 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 166 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 167 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 226 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 227 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 286 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 287 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 346 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || |||| Sbjct: 5362 aacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacg 5303 Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5302 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5243 Query: 407 aaaacccaaggtttcctccgcaaggttcgtcc-acggagggtgagtcagggcctaagatc 465 |||||| |||| |||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 5242 aaaacctaagggttcctccgcaaggttcgtccaacggggggtgagtcagggcctaagatc 5183 Query: 466 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 ||||||||| | || ||||||||||||||||| ||||||||||||||| || |||||||| Sbjct: 5182 aggccgaaacg-gttgtcgatggacaacaggtgaatattcctgtactatcctttgttggt 5124 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatg 24 |||||||| ||||||||||||||| Sbjct: 5630 ggcaaactatgaatactagatatg 5607
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 573 bits (289), Expect = e-160 Identities = 421/465 (90%) Strand = Plus / Plus Query: 55 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 114 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 115 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 174 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 175 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 234 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 235 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 294 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 5245 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 5304 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 5305 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 5364 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5365 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaa 5424 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 519 |||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 5425 ggcgcagtcgatggacaacaggcgaatattcctgtaccacccctt 5469
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 573 bits (289), Expect = e-160 Identities = 421/465 (90%) Strand = Plus / Plus Query: 55 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 114 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 115 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 174 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 175 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 234 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 235 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 294 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1331 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1332 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaa 1391 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 519 |||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1392 ggcgcagtcgatggacaacaggcgaatattcctgtaccacccctt 1436
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 565 bits (285), Expect = e-158 Identities = 420/465 (90%) Strand = Plus / Plus Query: 55 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 114 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 115 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 174 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 175 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 234 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 235 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 294 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1331 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1332 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaa 1391 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 519 |||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1392 ggcgcagtcgatggacaacaggcgaatattcctgtaccacccctt 1436
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 557 bits (281), Expect = e-155 Identities = 419/465 (90%) Strand = Plus / Plus Query: 55 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 114 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 115 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 174 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 175 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 234 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 235 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 294 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 |||||||||||||||| ||| | |||||| | | | || | | || |||||||||||| Sbjct: 1207 taggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaa 1266 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1267 gcgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaaccta 1326 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 1327 agggttcctccgcaaggttcgtccacggagggttagtcagggcctaagattaggccgaaa 1386 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 519 |||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1387 ggcgcagtcgatggacaacaggcgaatattcctgtaccacccctt 1431
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 547 bits (276), Expect = e-152 Identities = 309/320 (96%) Strand = Plus / Plus Query: 206 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 265 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 266 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 325 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 326 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 385 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 386 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagg 445 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagg 994 Query: 446 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 995 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattc 1054 Query: 506 ctgtactaccccttgttggt 525 |||||||||||||||||||| Sbjct: 1055 ctgtactaccccttgttggt 1074
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 539 bits (272), Expect = e-150 Identities = 417/465 (89%), Gaps = 4/465 (0%) Strand = Plus / Plus Query: 54 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 113 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 114 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 173 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 174 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 233 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 234 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgc 289 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 290 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 349 ||||||||||||||||||||||||||| |||||| ||| |||| | || ||||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1212 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1271 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 |||||||| ||||||||||||| ||||||||||||||||||||||| |||||| | || | Sbjct: 1272 acccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggtgagac 1331 Query: 470 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 514 | || || | | | |||||||||||||| ||||||||||||||| Sbjct: 1332 caaatggtgcaattgatggacaacaggtttatattcctgtactac 1376 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatg 24 ||||||||||||||||||| |||| Sbjct: 873 ggcaaactctgaatactaggtatg 896
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 537 bits (271), Expect = e-149 Identities = 418/467 (89%), Gaps = 5/467 (1%) Strand = Plus / Plus Query: 51 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 110 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 111 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 170 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 171 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 230 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 231 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 290 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 291 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 350 ||||||||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| Sbjct: 1235 tcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagc 1294 Query: 351 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 410 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1295 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1354 Query: 411 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 470 || |||| ||||| ||||||||||||||||| ||||||||||||| |||||||||| | Sbjct: 1355 cctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatcatact 1414 Query: 471 gaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 517 |||||| |||| ||||||||| |||| ||||||||||||||||||| Sbjct: 1415 gaaaggtttagttgatggacaataggttaatattcctgtactacccc 1461 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac 26 |||||||| ||||||||||||||||| Sbjct: 932 ggcaaactatgaatactagatatgac 957
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 537 bits (271), Expect = e-149 Identities = 422/466 (90%), Gaps = 6/466 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 1055 ctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagccaagaggtttgcct 1114 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 | |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| || Sbjct: 1115 aaaagcagccacccttgaaagagtgcgtaataactcactgatcgagcgctcttgcgccga 1174 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1175 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtagggg 1234 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||| ||||| ||||||||| |||| ||| |||| |||||| | | | | | | Sbjct: 1235 agcgttcccccttatagggaagcacccgccccagcaagggtggacgaaaccg-atctaaa 1293 Query: 361 atgtcggcttgagtaacgaaaaca-ttggtgagaatccaatgccccgaaaacccaaggtt 419 ||||| ||||||||| ||||| ||||||||||||||||||||| |||||| |||| | Sbjct: 1294 atgtccccttgagtaaaccaaacatttggtgagaatccaatgcccccaaaacctaagggt 1353 Query: 420 tcctccgc-aaggttcgtccacgga--gggtgagtc-agggcctaa 461 |||||| | |||||||||||||||| ||||||||| ||||||||| Sbjct: 1354 tcctccccaaaggttcgtccacggatggggtgagtcaagggcctaa 1399
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 517 bits (261), Expect = e-143 Identities = 297/309 (96%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 130876 ggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgag 130817 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130816 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 130757 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 130756 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 130697 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 130696 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 130637 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| Sbjct: 130636 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtagggg 130577 Query: 301 agcgttccg 309 ||||||||| Sbjct: 130576 agcgttccg 130568 Score = 517 bits (261), Expect = e-143 Identities = 297/309 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 102569 ggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgag 102628 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102629 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 102688 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 102689 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 102748 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 102749 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 102808 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| Sbjct: 102809 agatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtagggg 102868 Query: 301 agcgttccg 309 ||||||||| Sbjct: 102869 agcgttccg 102877 Score = 331 bits (167), Expect = 1e-87 Identities = 179/183 (97%) Strand = Plus / Minus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130474 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 130415 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 130414 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 130355 Query: 523 ggt 525 ||| Sbjct: 130354 ggt 130352 Score = 331 bits (167), Expect = 1e-87 Identities = 179/183 (97%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102971 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 103030 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 522 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 103031 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 103090 Query: 523 ggt 525 ||| Sbjct: 103091 ggt 103093
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 509 bits (257), Expect = e-141 Identities = 305/321 (95%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 923 ggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgag 982 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 acaatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 1043 ctaaatgaccgctcaatgataaaggaggtaggggtgcacagacagccacgaggtttgcct 1102 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 1103 ataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccca 1162 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1163 agatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 1222 Query: 301 agcgttccgccttagagggaa 321 |||||||| |||||||||||| Sbjct: 1223 agcgttcccccttagagggaa 1243 Score = 77.8 bits (39), Expect = 3e-11 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 367 gcttgagtaacgaaaacattggtgagaatccaatg-ccccgaaaacccaaggtttcctcc 425 |||||||||||| ||||| ||||||||||| |||| ||||||||| | |||| ||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccccgaaaaactaagggttcctcc 1347 Query: 426 gc-aaggttcgtccacggagggt 447 | |||||||||||||||||||| Sbjct: 1348 ccaaaggttcgtccacggagggt 1370
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 509 bits (257), Expect = e-141 Identities = 413/461 (89%), Gaps = 3/461 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 934 ggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgag 993 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 994 accatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1053 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 1054 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaagaggtttgcct 1113 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 1114 agaagcagccacccttgaaagagtgcgtaatagctcactgatccagcgctcttgcgccca 1173 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 | ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1174 aaatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtagggg 1233 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||| ||||| |||||| || || | | | |||| ||| || ||||| | ||| Sbjct: 1234 agcgttcccccttaaagggaaacaccccccccaacatgggtggaccaaacggaaaccaga 1293 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg-aaaacccaaggtt 419 ||||| || | ||||||| ||||||||||||||||| |||||||| |||| | || | | Sbjct: 1294 atgtccgccttagtaacgcaaacattggtgagaatctaatgccccccaaaaactaaaggt 1353 Query: 420 tcctccgcaa-ggttcgtccacgga-gggtgagtcagggcc 458 |||||| ||| ||||||||||| || |||||||||| |||| Sbjct: 1354 tcctccccaaaggttcgtccaccgaggggtgagtcaaggcc 1394
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 507 bits (256), Expect = e-140 Identities = 307/324 (94%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 921 ggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgag 980 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 981 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1040 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1041 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1100 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1101 aaaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1160 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 |||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1161 agatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaaaacatcggtagggg 1220 Query: 301 agcgttccgccttagagggaagca 324 ||||||||| |||| |||||||| Sbjct: 1221 agcgttccgtgttagggggaagca 1244
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 496 bits (250), Expect = e-137 Identities = 311/330 (94%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 896 ggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgag 955 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1015 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1016 ctaaatgaccgcccagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1075 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1076 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1135 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta-ggg 299 ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||| Sbjct: 1136 agatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatccgtatggg 1195 Query: 300 gagcgttccgccttagagggaagcaaccgc 329 ||||||||| |||| |||||||| |||| Sbjct: 1196 aagcgttccgtgttagggggaagcatccgc 1225
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 492 bits (248), Expect = e-136 Identities = 412/466 (88%), Gaps = 3/466 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 288 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 289 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 348 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 349 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 408 ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 1215 gcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaa 1274 Query: 409 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 468 ||||||||| ||||| || ||||||||||| || |||||||||||| |||||| | | | Sbjct: 1275 aacccaaggattcctacggaaggttcgtccgcgtagggtgagtcagaacctaaggtaaag 1334 Query: 469 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 514 || || ||||||||||||||| ||||||| |||||||||||||||| Sbjct: 1335 ccaaacggcgtagtcgatggataacaggttaatattcctgtactac 1380 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 gcaaactctgaatactagatatga 25 ||||||||||||||||| |||||| Sbjct: 881 gcaaactctgaatactaaatatga 904
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 492 bits (248), Expect = e-136 Identities = 407/460 (88%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 291 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 292 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 351 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 4225 cggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagca 4284 Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 4285 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 4344 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 | |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4345 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccg 4404 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||||||| | |||||||| ||| ||||||||||||||||| Sbjct: 4405 aaaggcgcaatcgatggataactggtcaatattcctgtac 4444
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 484 bits (244), Expect = e-133 Identities = 410/465 (88%), Gaps = 4/465 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 288 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 1191 Query: 289 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 348 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1192 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 1251 Query: 349 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 408 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 1311 Query: 409 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 468 |||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 1312 aacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaagg 1371 Query: 469 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1372 ccgaaaggcgtattcgatggacaacaggttaatattcctgtacta 1416
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 484 bits (244), Expect = e-133 Identities = 410/465 (88%), Gaps = 4/465 (0%) Strand = Plus / Minus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 288 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 114471 Query: 289 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 348 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114470 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 114411 Query: 349 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 408 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 114410 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 114351 Query: 409 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 468 |||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 114350 aacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaagg 114291 Query: 469 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 114290 ccgaaaggcgtattcgatggacaacaggttaatattcctgtacta 114246 Score = 484 bits (244), Expect = e-133 Identities = 410/465 (88%), Gaps = 4/465 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 288 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 87517 Query: 289 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 348 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87518 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 87577 Query: 349 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 408 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87578 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 87637 Query: 409 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 468 |||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 87638 aacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaagg 87697 Query: 469 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 87698 ccgaaaggcgtattcgatggacaacaggttaatattcctgtacta 87742
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 468 bits (236), Expect = e-129 Identities = 304/327 (92%), Gaps = 6/327 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||||||||||||||| | |||||||| ||||||||||| |||| Sbjct: 935 ggcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgag 988 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 989 acgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggccc 1048 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 1049 ctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccacgaggtttgcct 1108 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 1109 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccca 1168 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 | |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1169 aaatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 1228 Query: 301 agcgttccgccttagagggaagcaacc 327 ||||||||||| || |||||| ||||| Sbjct: 1229 agcgttccgccctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 380 aaacattggtgagaatccaatgccccgaaaa 410 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 468 bits (236), Expect = e-129 Identities = 404/460 (87%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 291 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 292 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 351 |||||||||||||||| || |||| |||||| | | |||| | | || |||||||| Sbjct: 1191 cggtaggggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagca 1250 Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1251 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 1310 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 | |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1311 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccg 1370 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||||||| | |||||||| ||| ||| ||||||||||||| Sbjct: 1371 aaaggcgcaatcgatggataacgggttaatattcctgtac 1410
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 468 bits (236), Expect = e-129 Identities = 405/460 (88%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 291 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 292 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 351 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 1190 cggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagca 1249 Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1250 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1309 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 | |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1310 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccg 1369 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 | ||||| | |||||||| ||| ||| ||||||||||||| Sbjct: 1370 acaggcgcaatcgatggataacgggttaatattcctgtac 1409
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 462 bits (233), Expect = e-127 Identities = 286/301 (95%), Gaps = 2/301 (0%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggt-caaggtcggccagtga 59 ||||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||| Sbjct: 177758 ggcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtga 177817 Query: 60 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 119 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177818 gacgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggcc 177877 Query: 120 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 179 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 177878 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 177937 Query: 180 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 239 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 177938 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 177997 Query: 240 aagatgaacggggctaagcgat-ctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||| Sbjct: 177998 aagatgaacggggctaagcgatcctgccgaagctgtgggatgtcaaaatacatcggcagg 178057 Query: 299 g 299 | Sbjct: 178058 g 178058 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 161 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 161 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 115 aggcccctaaatgaccgctcag 136 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gtcgagagggaaacagcccggatc 106 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 gtcgagagggaaacagcccggatc 106 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 460 bits (232), Expect = e-126 Identities = 253/260 (97%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 122291 ggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcggccagtgag 122232 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 122231 acgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaaggccc 122172 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122171 ctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 122112 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122111 agaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgctga 122052 Query: 241 agatgaacggggctaagcga 260 |||||||||||||||||||| Sbjct: 122051 agatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 460 bits (232), Expect = e-126 Identities = 253/260 (97%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 12824832 ggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcggccagtgag 12824773 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12824772 acgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaaggccc 12824713 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824712 ctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 12824653 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 12824652 agaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgctga 12824593 Query: 241 agatgaacggggctaagcga 260 |||||||||||||||||||| Sbjct: 12824592 agatgaacggggctaagcga 12824573 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 418 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 |||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 2412040 tttcctccgcaaggttcgtccacggagggtgagttagggcctaagattaggc 2412091
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 456 bits (230), Expect = e-125 Identities = 230/230 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 779 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 839 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 899 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 230 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 448 bits (226), Expect = e-123 Identities = 364/410 (88%) Strand = Plus / Minus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 ||||||||||||||| |||||| || | ||||| ||| |||||||||||||| |||||| Sbjct: 2906 ggcaaactctgaatattagatacgatctcaaaatcacaagggtcaaggtcggcgagtgag 2847 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||| | |||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 2846 acgacgagggataagcttcatcgtcgagagggaaacaacctggatcaccagctaaggccc 2787 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 180 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2786 ctaaatgactgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcct 2727 Query: 181 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 240 ||||||| |||||||| ||| |||||||||||||||||| ||||||||| ||||| | | Sbjct: 2726 agaagcaaccacccttgaaaaagtgcgtaatagctcactaatcgagcgcacttgcaccaa 2667 Query: 241 agatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 300 ||||||| ||||||||||||||| |||||| |||||||||||||||||||| |||||| Sbjct: 2666 agatgaattgggctaagcgatctgttgaagctatgggatgtcaaaatgcatcgatagggg 2607 Query: 301 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 360 |||||||||||||||||||||||| | || || | ||| || || ||||||||| || Sbjct: 2606 agcgttccgccttagagggaagcacctgcacgagtagtggtggaagaggcggaagcggga 2547 Query: 361 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 410 |||||||||| ||| | ||||||||||||||||||||||||| ||||| Sbjct: 2546 atgtcggcttttttaaggcaaacattggtgagaatccaatgccctgaaaa 2497 Score = 149 bits (75), Expect = 1e-32 Identities = 99/107 (92%) Strand = Plus / Minus Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 2482 ttcctccgcaaggttcatccacggagggtgagttagggcctaagattaggccgaaaggtg 2423 Query: 479 tagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 525 |||||||||||||| |||| |||||||| |||||||| ||||||||| Sbjct: 2422 tagtcgatggacaagaggtgaatattccagtactacctcttgttggt 2376
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 436 bits (220), Expect = e-119 Identities = 235/240 (97%) Strand = Plus / Plus Query: 41 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 492 Query: 101 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 160 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 493 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 552 Query: 161 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 553 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 612 Query: 221 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 280 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 672
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 414 bits (209), Expect = e-112 Identities = 380/437 (86%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 292 ||||| ||| ||||||||| |||||| || ||||||||||||||||| ||| ||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatc 2739 Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 ||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||| | Sbjct: 2740 ggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcag 2799 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2800 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacc 2859 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 ||||||||||| | ||||||||||| |||||||||||||||| |||||| |||| || Sbjct: 2860 taaggtttcctctggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctga 2919 Query: 473 aaggcgtagtcgatgga 489 || |||||||||||||| Sbjct: 2920 aaagcgtagtcgatgga 2936
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 408 bits (206), Expect = e-111 Identities = 221/226 (97%) Strand = Plus / Plus Query: 41 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 508 Query: 101 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 160 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 509 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 568 Query: 161 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 569 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 628 Query: 221 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 266 ||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 629 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgcc 674
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 894 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 953 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 954 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1013 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1014 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1073 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1133 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1134 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1188 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1189 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1248 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1308 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1368 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 tagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 894 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 953 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 954 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1013 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1014 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1073 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1133 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1134 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1188 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1189 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1248 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1308 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1368 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 tagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 894 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 953 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 954 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1013 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1014 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1073 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1133 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1134 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1188 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1189 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1248 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1308 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1368 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 tagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| || | || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaggtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| |||| ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaataggttaatattcttgtactacccc 1408
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 404 bits (204), Expect = e-109 Identities = 441/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 396 bits (200), Expect = e-107 Identities = 440/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| |||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 440/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | |||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagcttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 440/519 (84%), Gaps = 7/519 (1%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| | Sbjct: 895 ggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcg 954 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||| Sbjct: 955 agaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggc 1014 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 |||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||| Sbjct: 1015 ccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgc 1074 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1075 ctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgcc 1134 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||||||| || || ||| ||||||| ||||||||| | |||||| ||| Sbjct: 1135 gaatatgaacgggaataggcaatccaccgaagccgtgggatgtaa-----catcggcagg 1189 Query: 299 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 358 ||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| || Sbjct: 1190 ggagcgttctgccttataaggaagcacctgcccgagaagtggtggatgaagcagaagtga 1249 Query: 359 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 418 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1250 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagga 1309 Query: 419 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 478 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1310 ttccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtt 1369 Query: 479 tagtcgatggacaacaggtcaatattcctgtactacccc 517 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1370 tagctgatggacaatagattaatattcttgtactacccc 1408
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 396 bits (200), Expect = e-107 Identities = 395/459 (86%), Gaps = 2/459 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 292 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 190110 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 190169 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 190170 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 190229 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 |||| |||||||| ||||||||||| |||||||||||||||| |||||| |||| || Sbjct: 190230 taaggattcctccggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctga 190289 Query: 473 aaggcgtagtcgatggacaacaggtcaatattcctgtac 511 || |||||||||||||| ||||||| ||||||||||||| Sbjct: 190290 aaagcgtagtcgatggataacaggttaatattcctgtac 190328 Score = 396 bits (200), Expect = e-107 Identities = 395/459 (86%), Gaps = 2/459 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 292 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 151537 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 151596 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 151597 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 151656 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 |||| |||||||| ||||||||||| |||||||||||||||| |||||| |||| || Sbjct: 151657 taaggattcctccggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctga 151716 Query: 473 aaggcgtagtcgatggacaacaggtcaatattcctgtac 511 || |||||||||||||| ||||||| ||||||||||||| Sbjct: 151717 aaagcgtagtcgatggataacaggttaatattcctgtac 151755
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 385 bits (194), Expect = e-103 Identities = 392/457 (85%), Gaps = 2/457 (0%) Strand = Plus / Plus Query: 55 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 114 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 115 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 174 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 175 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 234 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 235 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 294 ||| ||| ||||||||| ||||| || ||||||||||||||||||| | | |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcgg 189188 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 189189 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 189248 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 189249 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaaccta 189308 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| |||||||| ||||||||||| ||||||||||||||||||||||| |||| |||| Sbjct: 189309 aggattcctccggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaa 189368 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtac 511 |||||||||||||| ||||||| ||||||||||||| Sbjct: 189369 agcgtagtcgatggataacaggttaatattcctgtac 189405 Score = 385 bits (194), Expect = e-103 Identities = 392/457 (85%), Gaps = 2/457 (0%) Strand = Plus / Plus Query: 55 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 114 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 115 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 174 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 175 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 234 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 235 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 294 ||| ||| ||||||||| ||||| || ||||||||||||||||||| | | |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcgg 150745 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 150746 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 150805 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 150806 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaaccta 150865 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| |||||||| ||||||||||| ||||||||||||||||||||||| |||| |||| Sbjct: 150866 aggattcctccggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaa 150925 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtac 511 |||||||||||||| ||||||| ||||||||||||| Sbjct: 150926 agcgtagtcgatggataacaggttaatattcctgtac 150962
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 375 bits (189), Expect = e-100 Identities = 383/445 (86%), Gaps = 2/445 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 233 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 291 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 292 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 351 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1181 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1240 Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1241 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1300 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 |||||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 1301 ccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccg 1360 Query: 472 aaaggcgtagtcgatggacaacagg 496 || |||| || |||||||||||||| Sbjct: 1361 aagggcgcagccgatggacaacagg 1385
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 375 bits (189), Expect = e-100 Identities = 383/445 (86%), Gaps = 2/445 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 233 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 291 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 292 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 351 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1194 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1253 Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1254 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1313 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 |||||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 1314 ccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccg 1373 Query: 472 aaaggcgtagtcgatggacaacagg 496 || |||| || |||||||||||||| Sbjct: 1374 aagggcgcagccgatggacaacagg 1398
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 375 bits (189), Expect = e-100 Identities = 383/445 (86%), Gaps = 2/445 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 233 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 291 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 292 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 351 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 5768 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 5827 Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 5828 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 5887 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 |||||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 5888 ccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccg 5947 Query: 472 aaaggcgtagtcgatggacaacagg 496 || |||| || |||||||||||||| Sbjct: 5948 aagggcgcagccgatggacaacagg 5972
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 361 bits (182), Expect = 2e-96 Identities = 283/316 (89%), Gaps = 8/316 (2%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacc--caaaaataacaggggtcaaggtcggccagtg 58 |||||||| |||||||||||||||||| |||||||||||||| | ||||| | |||||| Sbjct: 919 ggcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtg 978 Query: 59 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118 |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 979 agaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggc 1038 Query: 119 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 178 ||||||||||||||| ||| ||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 1039 ccctaaatgaccgctaagttataaaggaggtaggggtgcatagacaaccaggaggtttgc 1098 Query: 179 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 238 ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1099 ctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcgcc 1158 Query: 239 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 298 ||| ||||| ||| ||||||| | |||||||||||||||||| | ||||||||| Sbjct: 1159 gaatatgaatgggaataagcgacccgccgaagctgtgggatgtaa------atcggtagg 1212 Query: 299 ggagcgttccgcctta 314 ||||||||| |||||| Sbjct: 1213 ggagcgttctgcctta 1228 Score = 206 bits (104), Expect = 5e-50 Identities = 155/172 (90%) Strand = Plus / Plus Query: 346 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 405 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 406 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 465 ||||||| |||| ||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1330 gaaaacctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatc 1389 Query: 466 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 517 | | |||||| |||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 1390 atactgaaaggtttagttgatggacaataggttaatattcctatactacccc 1441
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 359 bits (181), Expect = 6e-96 Identities = 184/185 (99%) Strand = Plus / Minus Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634548 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634489 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634488 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634429 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 526 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634428 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634369 Query: 527 cggag 531 ||||| Sbjct: 5634368 cggag 5634364
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 17 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 76 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 77 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 136 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 137 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 196 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 197 taaagagtgcgtaatagctca 217 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 17 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 76 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 77 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 136 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 137 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 196 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 197 taaagagtgcgtaatagctca 217 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 359 bits (181), Expect = 6e-96 Identities = 184/185 (99%) Strand = Plus / Minus Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634537 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634478 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634418 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 526 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634417 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634358 Query: 527 cggag 531 ||||| Sbjct: 5634357 cggag 5634353
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 359 bits (181), Expect = 6e-96 Identities = 184/185 (99%) Strand = Plus / Plus Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18337 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 18396 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18397 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 18456 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 526 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18457 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 18516 Query: 527 cggag 531 ||||| Sbjct: 18517 cggag 18521
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 73 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 132 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 133 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 192 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 193 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 253 ctaagcgatctgccgaagctgtgggatgtcaaaat 287 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 73 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 132 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 133 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 192 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 193 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 253 ctaagcgatctgccgaagctgtgggatgtcaaaat 287 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 351 bits (177), Expect = 1e-93 Identities = 393/461 (85%), Gaps = 3/461 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 111 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 232 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 290 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 291 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 350 | ||||||||||||||| | |||| ||||| |||||||| | || ||| || | Sbjct: 1192 tgggtaggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaac 1251 Query: 351 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 410 |||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||| Sbjct: 1252 agaagtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaa 1311 Query: 411 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 470 || |||| ||||| || |||| ||||||||| |||||||||||||||||||||| | ||| Sbjct: 1312 cctaagggttccttcggaaggctcgtccacgaagggtgagtcagggcctaagatgatgcc 1371 Query: 471 gaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1372 gaaaggcgtagtcgatggacaacaggtcaaaattcctgtac 1412
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 80 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 139 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 140 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 199 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 200 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 259 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 260 atctgccgaagctgtgggat 279 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 331 bits (167), Expect = 1e-87 Identities = 387/458 (84%), Gaps = 3/458 (0%) Strand = Plus / Minus Query: 55 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 114 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 115 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 174 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 175 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 234 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 235 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 294 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 17854 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 17795 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 17794 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 17735 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| |||||||| |||| |||||| |||||||||||||||| |||||| | ||| | || Sbjct: 17734 agggttcctccggaaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaat 17676 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||| |||||||| ||||||| |||||||||||||| Sbjct: 17675 agcgtaatcgatggataacaggttaatattcctgtact 17638 Score = 331 bits (167), Expect = 1e-87 Identities = 387/458 (84%), Gaps = 3/458 (0%) Strand = Plus / Plus Query: 55 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 114 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 115 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 174 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 175 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 234 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 235 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 294 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 295 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 354 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 3012 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 3071 Query: 355 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 414 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3072 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 3131 Query: 415 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 474 ||| |||||||| |||| |||||| |||||||||||||||| |||||| | ||| | || Sbjct: 3132 agggttcctccggaaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaat 3190 Query: 475 ggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||| |||||||| ||||||| |||||||||||||| Sbjct: 3191 agcgtaatcgatggataacaggttaatattcctgtact 3228
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 319 bits (161), Expect = 5e-84 Identities = 387/460 (84%), Gaps = 3/460 (0%) Strand = Plus / Plus Query: 54 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 113 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 114 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 173 ||||||||||||| || |||| |||||||||||| |||| ||| |||||||| Sbjct: 2700 aaggcccctaaatagttactaagtggcaaaggaggtgggaatgcattaacaaccaggagg 2759 Query: 174 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 233 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 2760 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtctagtgatcct 2819 Query: 234 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 293 |||| ||| ||||||||| ||||| | ||||||| ||||||||||| | ||||||| Sbjct: 2820 gcgccgaaaatgaacgggactaagtaacttgccgaatctgtgggatgttta--tgcatcg 2877 Query: 294 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 353 |||||||||||||| || ||||| |||||| |||||| || || ||| |||| || Sbjct: 2878 gtaggggagcgttctgc-ttagattgaagcattaacgaaagtggatgtggacaaagcaga 2936 Query: 354 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 413 || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 2937 agtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccggaaacct 2996 Query: 414 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 473 |||| |||||| | |||| ||||||||||||||| ||||||| ||||| || |||||||| Sbjct: 2997 aaggattcctctggaaggctcgtccacggagggttagtcaggacctaaaatgaggccgaa 3056 Query: 474 aggcgtagtcgatggacaacaggtcaatattcctgtacta 513 ||||||| | |||||||||||||| ||||||||||||||| Sbjct: 3057 aggcgtaattgatggacaacaggttaatattcctgtacta 3096
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 54 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 113 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 114 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 173 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 174 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 233 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 234 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 290 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 349 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 ||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||| || Sbjct: 1721 acctaaggattcctacgcaaggttcgtccacgtggggtgagtcaggacctaagatcaagc 1780 Query: 470 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 |||| |||| |||||||||| ||||||| || |||||||||||| Sbjct: 1781 cgaatggcgcagtcgatggataacaggt-aacattcctgtacta 1823 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatga 25 |||||||||||||||||||| |||| Sbjct: 1321 ggcaaactctgaatactagacatga 1345
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 303 bits (153), Expect = 3e-79 Identities = 407/489 (83%), Gaps = 7/489 (1%) Strand = Plus / Plus Query: 29 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 88 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 89 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 148 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 149 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 208 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 209 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 268 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 269 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccg 328 ||||||||||||| |||||||||||||||||||| ||||| ||||||||| | | Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttcttccttatagggaagcacctg 1237 Query: 329 cgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattgg 388 | ||| | || || ||||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 1238 cacgagcagttgtggatgaagcagaagtgagaatgtcggcttgagtaacacaaacattgg 1297 Query: 389 tgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtg 448 ||||||||||| |||| |||||| |||| ||||| | |||||||| |||||| |||||| Sbjct: 1298 cgagaatccaattccccaaaaacctaagggttccttcacaaggttcatccacgtagggtg 1357 Query: 449 agtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctg 508 ||||||| |||||||||| | |||||| || | |||||| || |||| |||| ||||| Sbjct: 1358 agtcaggtcctaagatcatactgaaaggttta-ttgatggataataggttaataatcctg 1416 Query: 509 tactacccc 517 ||||||||| Sbjct: 1417 tactacccc 1425
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 299 bits (151), Expect = 5e-78 Identities = 154/155 (99%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 889 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 890 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 949 Query: 121 ctaaatgaccgctcagtgataaaggaggtgggggt 155 ||||||||||||||||||||||||||||| ||||| Sbjct: 950 ctaaatgaccgctcagtgataaaggaggtaggggt 984
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Plus Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| |||| ||||| | ||||||||||| | ||||| ||||||| |||||| || Sbjct: 1359 aaaacctaagggttcctttactaggttcgtccatgaagggttagtcaggacctaaggcca 1418 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 | |||||||| |||||||||||| ||||||| |||||||||||||| Sbjct: 1419 gaccgaaaggtgtagtcgatggagaacaggttaatattcctgtact 1464 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 atcggtaggggagcgttccgc 310 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 7e-71 Identities = 232/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 49 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 108 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 109 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 168 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 169 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 228 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 229 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 288 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 289 catcggtaggggagcgttccgc 310 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||||| |||| ||||| | ||| ||||||| ||||||||||||||| |||||| Sbjct: 1300 tccgaaaacctaagggttccttcagtaggctcgtccatggagggtgagtcaggacctaag 1359 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||| |||||| |||||||| || ||||||||||| Sbjct: 1360 gagaggccgaaaggcgtatccgatggccaacaggttaacattcctgtact 1409
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 143 bits (72), Expect = 7e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| ||||||||||||||||||| |||||| ||| ||||||| |||||||| | Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaattagggtaagaatccctaaccccgaaacc 932 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 |||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 933 ccaagggttcctccgcaaggctcgtccacggagggttagtcagggcctaaggcgaggccg 992 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 |||||||||||||||||||||| ||| || ||||| |||| Sbjct: 993 aaaggcgtagtcgatggacaacgggttaacattcccgtac 1032
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 252 bits (127), Expect = 1e-63 Identities = 199/223 (89%) Strand = Plus / Plus Query: 290 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 349 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 ||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| |||| Sbjct: 1530 acctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaaggcgaggc 1589 Query: 470 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1590 cgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1632
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 242 bits (122), Expect = 1e-60 Identities = 158/170 (92%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 1328 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcagggcctaag 1387 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 |||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1388 gcgaggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1437 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 atcggtaggggagcgttccgc 310 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 266 bits (134), Expect = 7e-68 Identities = 134/134 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 774 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 834 Query: 121 ctaaatgaccgctc 134 |||||||||||||| Sbjct: 835 ctaaatgaccgctc 848
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 264 bits (133), Expect = 3e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 292 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 351 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 | |||| ||||||||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 1312 ctaagggttcctccgcaaggctcgtccacggagggtgagtcaggtcctaagataaggccg 1371 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctg 508 ||||||||||||||||| | ||||| |||||||||| Sbjct: 1372 aaaggcgtagtcgatggctatcaggttaatattcctg 1408 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caaactctgaatactagata 22 |||||||||||||||||||| Sbjct: 915 caaactctgaatactagata 934
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 1e-63 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 290 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 291 tcggtaggggagcgttccg 309 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 139 bits (70), Expect = 1e-29 Identities = 143/166 (86%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 408 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 409 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 468 | ||||||| ||||||| | ||| ||||||| ||||||| ||||||| ||||||| ||| Sbjct: 1312 agcccaagggttcctccactaggctcgtccagggagggtcagtcaggacctaagacgagg 1371 Query: 469 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 514 || || |||| |||||||||| |||||| || ||||||||||||| Sbjct: 1372 ccaaacggcgcagtcgatggaaaacaggcgaacattcctgtactac 1417
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 274 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 274 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 170174 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 170115 Query: 473 aaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 170114 caggcgtagtcgatggcaaactggttaatattcctgtact 170075 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 122752 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 122811 Query: 473 aaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 122812 caggcgtagtcgatggcaaactggttaatattcctgtact 122851
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 291 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 292 cggtaggggagcgttccg 309 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 357 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 416 ||||||||||||||||||| || |||||||||||||||||||||||||||||| || ||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaccctaag 3014 Query: 417 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 476 | |||||||| |||||||||| |||||||| |||| || |||||| ||| ||||||| Sbjct: 3015 ggttcctccggcaggttcgtccgcggagggttagtcgggacctaaggcgaggtcgaaagg 3074 Query: 477 cgtagtcgatggaca 491 ||||||||||||||| Sbjct: 3075 cgtagtcgatggaca 3089
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1342 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 1401 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1402 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1451 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 274 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 1343 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 1402 Query: 473 aaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 1403 caggcgtagtcgatggcaaactggttaatattcctgtact 1442
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 3111 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 3170 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 3171 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 3220 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 69.9 bits (35), Expect = 8e-09 Identities = 131/163 (80%) Strand = Plus / Plus Query: 349 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 408 ||||||| ||||||||||||||||||| || ||| | ||||||||||| | ||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcctacaccccgaa 922 Query: 409 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 468 | || |||| |||| || ||| |||||| | |||||||||||| |||||| ||| Sbjct: 923 accctaagggttccagagccaggctcgtccgctctgggtgagtcaggtcctaaggcgagg 982 Query: 469 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 || || ||||||||||||||| ||| ||| || ||||| |||| Sbjct: 983 ccaaacggcgtagtcgatggataacgggttaacattcccgtac 1025
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 248 bits (125), Expect = 2e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 277 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| |||| ||||||| | ||| ||||||| || |||| |||| || |||||| || Sbjct: 1454 aaaacctaaggcttcctccactaggctcgtccatggggggttagtcgggacctaaggcca 1513 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1514 ggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1559
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 470 cgaaaggcgtagtcgatggaca 491 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5434056 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5433997 Query: 470 cgaaaggcgtagtcgatggaca 491 |||||||||||||||||||||| Sbjct: 5433996 cgaaaggcgtagtcgatggaca 5433975 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 3897382 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 3897441 Query: 470 cgaaaggcgtagtcgatggaca 491 |||||||||||||||||||||| Sbjct: 3897442 cgaaaggcgtagtcgatggaca 3897463 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2806777 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2806718 Query: 470 cgaaaggcgtagtcgatggaca 491 |||||||||||||||||||||| Sbjct: 2806717 cgaaaggcgtagtcgatggaca 2806696 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 1006225 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 1006284 Query: 470 cgaaaggcgtagtcgatggaca 491 |||||||||||||||||||||| Sbjct: 1006285 cgaaaggcgtagtcgatggaca 1006306
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5944099 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5944040 Query: 470 cgaaaggcgtagtcgatggaca 491 |||||||||||||||||||||| Sbjct: 5944039 cgaaaggcgtagtcgatggaca 5944018 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 4916455 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 4916396 Query: 470 cgaaaggcgtagtcgatggaca 491 |||||||||||||||||||||| Sbjct: 4916395 cgaaaggcgtagtcgatggaca 4916374 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2503841 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2503900 Query: 470 cgaaaggcgtagtcgatggaca 491 |||||||||||||||||||||| Sbjct: 2503901 cgaaaggcgtagtcgatggaca 2503922 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2380521 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2380580 Query: 470 cgaaaggcgtagtcgatggaca 491 |||||||||||||||||||||| Sbjct: 2380581 cgaaaggcgtagtcgatggaca 2380602
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2837 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2838 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2897 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 2898 aaaagcgtagtcgatggacaacgggttaacattcccgtac 2937
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 129 bits (65), Expect = 1e-26 Identities = 128/149 (85%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 919 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 978 Query: 463 atcaggccgaaaggcgtagtcgatggaca 491 ||| |||||||||||||||||||||| Sbjct: 979 gcgaggtcgaaaggcgtagtcgatggaca 1007
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1298 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 1357 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1358 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1407 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagata 22 |||||||||||||||||||||| Sbjct: 910 ggcaaactctgaatactagata 931
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 26107 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 26166 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 26167 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 26216 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagata 22 |||||||||||||||||||||| Sbjct: 25719 ggcaaactctgaatactagata 25740
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 238 bits (120), Expect = 2e-59 Identities = 120/120 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 923 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 982 Query: 61 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 236 bits (119), Expect = 6e-59 Identities = 158/171 (92%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1492 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcaggacctaag 1551 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 ||||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1552 gccaggccgaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1602 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 277 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 232 ttgcgctgaagatgaacggggctaag 257 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 920 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 979 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 980 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1029
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 9e-58 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 287 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 288 gcatcggtaggggagcgttccg 309 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||| || |||| |||| || |||||||||| | |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccgctctgggttagtccggacctaag 980 Query: 463 atcaggccgaaaggcgtagtcgatggaca 491 ||| |||||||||||||||||||||| Sbjct: 981 gcgaggtcgaaaggcgtagtcgatggaca 1009
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 920 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 921 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 980 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 981 aaaagcgtagtcgatggacaacgggttaacattcccgtac 1020
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||| || |||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 919 cccgaaaccctaaggtttcctccgccaggttcgtccccggagggttagtcaggacctaag 978 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 |||||||| ||||||||||||||||||| ||| || ||||| ||||| Sbjct: 979 gcgaggccgaacggcgtagtcgatggacaacgggttaaaattcccgtact 1028 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 atcggtaggggagcgttccg 309 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 470 cgaaaggcgtagtcgatggaca 491 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 54 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 113 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 114 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 173 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 174 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 233 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 234 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 54 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 113 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 114 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 173 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 174 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 233 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 234 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 153 bits (77), Expect = 7e-34 Identities = 167/197 (84%) Strand = Plus / Minus Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 2050553 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 2050494 Query: 473 aaggcgtagtcgatgga 489 |||||||||||||||| Sbjct: 2050493 caggcgtagtcgatgga 2050477 Score = 153 bits (77), Expect = 7e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 472 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 1450948 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 1451007 Query: 473 aaggcgtagtcgatgga 489 |||||||||||||||| Sbjct: 1451008 caggcgtagtcgatgga 1451024
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 210 bits (106), Expect = 3e-51 Identities = 154/170 (90%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 137800 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 137859 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 137860 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 137909 Score = 210 bits (106), Expect = 3e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 47744 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 47685 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 47684 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 47635
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 289 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 348 ||||||||||||||||||||| | ||| | |||||| || ||| | | || |||||| Sbjct: 3019 catcggtaggggagcgttccgtcatagggtgaagcactaacgtaagtgagtgtggacgaa 3078 Query: 349 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 408 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3079 acggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 3138 Query: 409 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 468 ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 3139 aacccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggcgagg 3198 Query: 469 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||||||||||||||||||||| ||| | | |||||||| |||| Sbjct: 3199 ccgaaaggcgtagtcgatggataacggattaatattcccgtac 3241 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 65 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 124 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 125 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 184 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 185 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 244 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 245 gaacggggctaagcgatctgccgaagctgtgggatgt 281 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 226 bits (114), Expect = 6e-56 Identities = 195/222 (87%) Strand = Plus / Plus Query: 291 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 350 |||||||||||||||||||| | | | ||||| | || ||| |||||| |||||||| Sbjct: 1273 tcggtaggggagcgttccgctctcgggtgaagctttcacggaagtgggggtggacgaagc 1332 Query: 351 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 410 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1392 Query: 411 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 470 || |||| ||||||| | ||| ||||||| || |||| ||||||| ||||||| ||||| Sbjct: 1393 cctaagggttcctccactaggctcgtccatggggggttagtcaggacctaagactaggcc 1452 Query: 471 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1453 gaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1494 Score = 97.6 bits (49), Expect = 4e-17 Identities = 183/227 (80%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 ||||||||||| |||||||||||| | | ||| ||||||||||||||| ||||||||| Sbjct: 1016 gccagtgagactgcgggggataagctccgttgtcaagagggaaacagcccagatcaccag 1075 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||||||||||||| | || |||| ||||| ||| | ||| | ||| |||||| Sbjct: 1076 ctaaggcccctaaatggtcactaagtggataaggatgtgagaatgcttaaacaaccagga 1135 Query: 172 ggtttgcctagaagcagc---caccctttaaagagtgcgtaatagctcactgatcgagcg 228 |||| || |||||||||| | |||| ||||||||||||||||||||||| | |||| Sbjct: 1136 ggttcgcttagaagcagctatcttccttgaaagagtgcgtaatagctcactggtaaagcg 1195 Query: 229 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 ||||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1196 ttcttgcgccgagaatggccgggactaagtgacctgccgaagctgtg 1242
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 233 tgcgctgaagatgaacggggctaag 257 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | | Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcctaaac 916 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||| || |||| |||||||| | || |||||| ||||||||||||||||||||||| Sbjct: 917 cccgaaaccctaagggttcctccggacggctcgtccgcggagggtgagtcagggcctaag 976 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcc 506 |||| ||| |||||||||||||| ||| ||| || ||||| Sbjct: 977 gcgaggctgaacagcgtagtcgatggataacgggttaaaattcc 1020
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 127 bits (64), Expect = 4e-26 Identities = 136/160 (85%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2836 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2837 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2896 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||| |||||||||||||| ||| ||| || ||||| |||| Sbjct: 2897 aaaagcgtagtcgatggataacgggttaacattcccgtac 2936
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 222 bits (112), Expect = 9e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 99.6 bits (50), Expect = 9e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| || ||| | ||||||||| | |||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacaccccgaaa 927 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 || |||| ||||||||| ||||||||||||||||||| |||| || |||||| ||| Sbjct: 928 ccctaagggttcctccgccaggttcgtccacggagggttagtcgggtcctaaggcgaggt 987 Query: 470 cgaaaggcgtagtcgatggaca 491 |||| ||||||||||||||||| Sbjct: 988 cgaagggcgtagtcgatggaca 1009
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 3328321 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 3328322 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 3328381 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 3328382 agaggcgtagtcgatggacaaccggtcaatattccggtact 3328422 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 2450407 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 2450406 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 2450347 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 2450346 agaggcgtagtcgatggacaaccggtcaatattccggtact 2450306
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 54 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 113 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 114 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 173 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 174 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 233 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 234 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 54 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 113 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 114 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 173 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 174 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 233 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 234 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 2313589 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 2313648 Query: 463 atcaggccgaaaggcgtagtcgatggaca 491 ||||||| |||||||||||||||||| Sbjct: 2313649 gcgaggccgacaggcgtagtcgatggaca 2313677 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 1108258 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 1108199 Query: 463 atcaggccgaaaggcgtagtcgatggaca 491 ||||||| |||||||||||||||||| Sbjct: 1108198 gcgaggccgacaggcgtagtcgatggaca 1108170
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1029 ccagtgagaccgtgggggataagcttcatggtcaagagggaaacagcccagatcaccagc 1088 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||| || | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1089 taaggcccctaagtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1148 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1149 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1208 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1209 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 1251
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| |||| ||||||| | ||||||||||| ||||||| ||||||| ||||| || Sbjct: 1296 aaaacctaagggttcctccactaggttcgtccatggagggttagtcaggacctaaagcca 1355 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 |||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 1356 ggccgaaaggcgtagttgatggaaaacaggttaatattcctgtact 1401 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 atcggtaggggagcgttccg 309 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 513 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1029 ccagtgagaccgtgggggataagcttcatggtcaagagggaaacagcccagatcaccagc 1088 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||| || | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1089 taaggcccctaagtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1148 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1149 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1208 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1209 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 1251
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 1e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 232 ttgcgctgaagatgaacggggctaag 257 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 918 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 977 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 978 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1027
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 6e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 186 bits (94), Expect = 5e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||| ||||||| ||||| || |||| |||||| || ||||| |||| || |||||| Sbjct: 2333521 cccgaaaccccaagggttccttcggaaggctcgtccgcgaagggttagtcgggacctaag 2333462 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 |||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 2333461 gcgaggccgaaaggcgtagtcgatggacaactggtcaatattccagtact 2333412
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 6e-53 Identities = 154/169 (91%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 1786 cccgaaaacccaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 1845 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 |||||||||||||||||||||||| ||| ||| |||||||| |||| Sbjct: 1846 gcgaggccgaaaggcgtagtcgatggataacgggttaatattcccgtac 1894 Score = 216 bits (109), Expect = 6e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 65 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 124 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 125 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 184 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 185 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 244 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 245 gaacggggctaagcgatctgccgaagctgtgggatgt 281 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 |||||| |||||| ||||||||||||||||||| || ||| | ||||||||| | | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacac 920 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 980 Query: 463 atcaggccgaaaggcgtagtcgatggaca 491 |||||||| ||||||||||||||||| Sbjct: 981 gcgaggccgaacggcgtagtcgatggaca 1009
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagct 272 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 1327 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 464 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 1328 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 1379 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 478 gtagtcgatggacaacaggtcaatattcctgtact 512 |||||||||||| ||||||| |||||||||||||| Sbjct: 1397 gtagtcgatggaaaacaggttaatattcctgtact 1431
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagct 272 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 293 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 352 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 353 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 412 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 3209 Query: 413 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 464 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 3210 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 3261 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 478 gtagtcgatggacaacaggtcaatattcctgtact 512 |||||||||||| ||||||| |||||||||||||| Sbjct: 3279 gtagtcgatggaaaacaggttaatattcctgtact 3313
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 9e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 65 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 124 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 125 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 184 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 185 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 244 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 245 gaacggggctaagcgatctgccgaagctgtgggat 279 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||| ||||| ||||||| | ||||| ||||||| |||||| Sbjct: 1341 cccgaaaacctaagggttcctttacaaggctcgtccatgaagggttagtcaggtcctaag 1400 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1401 gcgaggtcgaaaggcgtagtcgatggaaaacaggtcaacattcctgtact 1450
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 212 bits (107), Expect = 9e-52 Identities = 107/107 (100%) Strand = Plus / Plus Query: 425 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 60 Query: 485 atggacaacaggtcaatattcctgtactaccccttgttggtacggag 531 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggacaacaggtcaatattcctgtactaccccttgttggtacggag 107
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 347 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 406 |||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2999 aagcagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccg 3058 Query: 407 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 466 |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 3059 aaaacctaaggtttcctctggaaggttcgtccacggagggtgagtcagggcctaaggcga 3118 Query: 467 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||| |||| |||||||||||||| |||||| |||||||||||||| Sbjct: 3119 ggctgaaaagcgtagtcgatggatgacaggttaatattcctgtact 3164 Score = 163 bits (82), Expect = 7e-37 Identities = 215/256 (83%), Gaps = 5/256 (1%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggag 2828 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2829 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcc 2888 Query: 233 tgcgctgaagatgaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcat 291 ||||| ||| ||||| ||| || || ||| ||||||||||||||||||| || ||| Sbjct: 2889 tgcgccgaaaatgaatgggacttag-tatcttgccgaagctgtgggatgtttaa---cat 2944 Query: 292 cggtaggggagcgttc 307 |||||||||||||||| Sbjct: 2945 cggtaggggagcgttc 2960
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcctacaccccgaaatc 925 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 |||||| |||||||| |||| |||||| |||||||| |||| || |||||| |||||| Sbjct: 926 ccaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaaggcgaggccg 985 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 |||||||||||||||||||||| ||| |||||||| |||| Sbjct: 986 aaaggcgtagtcgatggacaacgggttaatattcccgtac 1025
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 208 bits (105), Expect = 1e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 54 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 113 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 114 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 173 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 174 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 233 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 234 gcgctgaagatgaacggggctaagc 258 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 157 bits (79), Expect = 4e-35 Identities = 145/167 (86%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||| || |||| |||||||| ||||||||||| |||||||| || | || |||||| Sbjct: 907 tccgaaaccctaagggttcctccggaaggttcgtccgcggagggttagccgggacctaag 966 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgt 509 | |||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 967 gcgaagccgaagggcgtagtcgatggataacaggtgtatattcctgt 1013
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 ||||||| || |||| |||||||| |||| |||||| |||||||| |||| || |||||| Sbjct: 915 cccgaaaccctaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaag 974 Query: 463 atcaggccgaaaggcgtagtcgatggaca 491 | |||||| ||||||||||||||||| Sbjct: 975 gcgaagccgaagggcgtagtcgatggaca 1003
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151116 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 151057 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 151056 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 150997 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 150996 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 150948 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43087 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 43146 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 43147 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 43206 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 43207 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 43255 Score = 172 bits (87), Expect = 7e-40 Identities = 189/223 (84%) Strand = Plus / Minus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 151413 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 151354 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 151353 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 151294 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 151293 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 151234 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 151233 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 151191 Score = 172 bits (87), Expect = 7e-40 Identities = 189/223 (84%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 42790 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 42849 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 42850 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 42909 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 42910 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 42969 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 42970 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 43012
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1318 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1319 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1378 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 1379 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 1427 Score = 172 bits (87), Expect = 7e-40 Identities = 189/223 (84%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 962 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1021 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1022 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1081 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1082 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1141 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1142 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 1184
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Plus Query: 357 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1287 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 1346 Query: 417 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 476 | ||||||| | ||||||||||| || |||| ||||||| ||||||| |||||| ||||| Sbjct: 1347 ggttcctccactaggttcgtccatggggggttagtcaggacctaagaccaggccaaaagg 1406 Query: 477 cgtagtcgatggacaacaggtcaatattcctgtacta 513 ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1407 cgtcgtcgatggaaaacaggttaatattcctgtacta 1443 Score = 174 bits (88), Expect = 2e-40 Identities = 190/224 (84%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1038 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1097 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1098 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1157 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 ||||| || ||| |||| ||||| || ||||||||||||||| Sbjct: 1158 tgcgccgataatggccgggactaagtgacctgccgaagctgtgg 1201
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 206 bits (104), Expect = 5e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 923 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 924 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 983 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 984 agaggcgtagtcgatggacaaccggtcaatattccggtact 1024
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 1321 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 1380 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 1381 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 1430
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 343 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 402 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 403 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 462 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 3059 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 3118 Query: 463 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 3119 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 3168
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcct 507 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 232 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 233 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 279 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcct 507 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1931 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 ||| |||| |||||| ||||||||||||| || |||| |||||||||||||| |||| Sbjct: 1932 acctaagggttcctctacaaggttcgtccatggggggttagtcagggcctaaggcgaggc 1991 Query: 470 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 |||| ||||||||||||||| ||||||| |||||||||||||| Sbjct: 1992 cgaatggcgtagtcgatggaaaacaggttaatattcctgtact 2034 Score = 109 bits (55), Expect = 9e-21 Identities = 154/187 (82%) Strand = Plus / Plus Query: 89 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 148 ||||||||||||| ||||||||||||||||||||||||| || || |||| |||||| | Sbjct: 1346 agggaaacagcccagatcaccagctaaggcccctaaatggccactaagtggaaaaggatg 1405 Query: 149 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 208 || | |||| | ||| ||||||||||||| |||||||||| | |||||||||||| ||| Sbjct: 1406 tgagaatgcataaacaaccaggaggtttgcttagaagcagcaatcctttaaagagttcgt 1465 Query: 209 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 268 || || ||||| | |||| ||||||| ||| || | |||| ||||| | ||||||| Sbjct: 1466 aacagaacactggtaaagcgttcttgcgccgaaaataaccgggactaagtggcctgccga 1525 Query: 269 agctgtg 275 ||||||| Sbjct: 1526 agctgtg 1532
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1318 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgtgaatccaatgccccgaaa 1377 Query: 410 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 469 ||| || ||||||| | ||||||||||| || |||||||||||| |||||||| |||| Sbjct: 1378 accgttgggttcctccactaggttcgtccatggggggtgagtcaggacctaagattaggc 1437 Query: 470 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 |||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1438 cgaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1480 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 87 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 146 ||||||||||||||| ||||| ||||||||||||||||||| | || |||| |||||| Sbjct: 1024 agagggaaacagcccagatcattagctaaggcccctaaatgatcactaagtggaaaagga 1083 Query: 147 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 206 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1084 tgtgagaatgcccaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtgc 1143 Query: 207 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 266 |||||||||||||| | |||| |||||| || ||| |||| ||||| |||||||| Sbjct: 1144 gtaatagctcactggtaaagcgtttttgcgccgacaatggccgggactaagtgatctgcc 1203 Query: 267 gaagctgtg 275 ||||||||| Sbjct: 1204 gaagctgtg 1212 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 atcggtaggggagcgttccg 309 |||||||||||||||||||| Sbjct: 1259 atcggtaggggagcgttccg 1278
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 204 bits (103), Expect = 2e-49 Identities = 157/175 (89%) Strand = Plus / Plus Query: 338 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 397 |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1496 gggtggacgaagcggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatcc 1555 Query: 398 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 457 ||||||||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| | Sbjct: 1556 aatgccccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggac 1615 Query: 458 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 |||||| |||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 1616 ctaagactaggccgaaaggcgtcgtcgatggaaaacaggcgaatattcctgtact 1670 Score = 77.8 bits (39), Expect = 3e-11 Identities = 141/173 (81%), Gaps = 4/173 (2%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatc-gtcgagagggaaacagcccggatcacca 110 ||||||||||| | |||||||||||| | | ||| ||||||||||||||| |||||||| Sbjct: 1081 gccagtgagactacgggggataagctccgtatgtcaagagggaaacagcccagatcacca 1140 Query: 111 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 170 | ||||||||| ||||| | || |||| |||||| ||| | ||| | ||| ||||| Sbjct: 1141 gataaggccccaaaatggtcactaagtggaaaaggatgtgagaatgcttaaacaaccagg 1200 Query: 171 aggtttgcctagaagcagc---caccctttaaagagtgcgtaatagctcactg 220 ||||| || |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1201 aggttcgcttagaagcagctatcttccttgaaagagtgcgtaatagctcactg 1253
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 202 bits (102), Expect = 8e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 54 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 113 ||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 959 cagtgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagtt 1018 Query: 114 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 173 |||||||| ||| || ||| |||| |||||||||||| ||| |||||| |||||||| Sbjct: 1019 aaggccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggagg 1078 Query: 174 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 233 |||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | Sbjct: 1079 tttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcct 1138 Query: 234 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 275 |||| ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1139 gcgccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| |||||||||||||||||||||| || |||| |||||| ||||| |||| Sbjct: 1259 gaagtgagaatgtcggcttgagtaacgtaattgaaggtgtgaatccttcaccccggaaac 1318 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 |||||| ||||||| | ||| ||||||| ||||||| ||||||| |||||| ||||| Sbjct: 1319 ccaagggttcctcctccaggctcgtccaaggagggttagtcaggtcctaaggcaaggcca 1378 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 || ||||||||||||||| |||||||||| ||||||||||| Sbjct: 1379 aacggcgtagtcgatggaaaacaggtcaacattcctgtact 1419
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 202 bits (102), Expect = 8e-49 Identities = 147/162 (90%) Strand = Plus / Plus Query: 351 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 410 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1479 Query: 411 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 470 || |||| ||||||| | |||||||||| || |||||||||||| |||||| |||||| Sbjct: 1480 cctaagggttcctccaccaggttcgtccgtggggggtgagtcaggacctaaggccaggcc 1539 Query: 471 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 512 ||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 1540 gaaaggcgtcgtcgatggcaaacaggttaatattcctgtact 1581 Score = 135 bits (68), Expect = 2e-28 Identities = 143/168 (85%) Strand = Plus / Plus Query: 53 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 112 ||||||||| || |||||||||||| || || ||||||||||||||| |||||||||| Sbjct: 1007 ccagtgagaaaatcggggataagcttgattttcaagagggaaacagcccagatcaccagc 1066 Query: 113 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 172 ||||||||| ||||| || |||| |||||| ||||| ||| | ||| ||||||| Sbjct: 1067 taaggccccaaaatggtgactaagtggaaaaggatgtgggaatgctgaaacaaccaggag 1126 Query: 173 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 220 |||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1127 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactg 1174 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggcaaactctgaatactaga 20 |||||||||||||||||||| Sbjct: 971 ggcaaactctgaatactaga 990
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 281 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 281 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 410 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 468 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| ||| Sbjct: 114116 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 114057 Query: 469 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||||||||||||||||||||| ||| |||||| ||||| |||| Sbjct: 114056 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 114014 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 350 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 409 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 410 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 468 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| ||| Sbjct: 3401 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 3460 Query: 469 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 ||||||||||||||||||||| ||| |||||| ||||| |||| Sbjct: 3461 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 3503 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 catcggtaggggagcgttccg 309 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 catcggtaggggagcgttccg 309 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 200 bits (101), Expect = 3e-48 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 52 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 112 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 171 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccagga 685 Query: 172 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 231 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 232 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 276 | ||| ||| ||||||||| |||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacgggactaagcatcctaccgaagctgtgg 789 Score = 182 bits (92), Expect = 8e-43 Identities = 143/160 (89%) Strand = Plus / Plus Query: 352 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 411 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 866 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 925 Query: 412 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 471 | |||| |||||||| |||| |||||| |||||||| |||| || |||||| |||||| Sbjct: 926 ctaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaaggcgaggccg 985 Query: 472 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 511 |||||||||||||||||||||| ||| |||||||| |||| Sbjct: 986 aaaggcgtagtcgatggacaacgggttaatattcccgtac 1025
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 86 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 145 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 146 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 204 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 205 gcgtaatagctcactg 220 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,215,965 Number of Sequences: 3902068 Number of extensions: 3215965 Number of successful extensions: 57589 Number of sequences better than 10.0: 2458 Number of HSP's better than 10.0 without gapping: 2488 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 44135 Number of HSP's gapped (non-prelim): 12749 length of query: 531 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 508 effective length of database: 17,143,297,704 effective search space: 8708795233632 effective search space used: 8708795233632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
