ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal34p22 |
|---|---|
| Clone Library Name | barley_pub |
>Y074_SYNY3 (Q55790) Hypothetical UPF0051 protein slr0074| Length = 480 Score = 235 bits (599), Expect(2) = 2e-61 Identities = 117/170 (68%), Positives = 136/170 (80%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 TWKYPS LVGD++VGEFYS+ALT + QQADTGTKMIH GKN+RS IISKGISAG S N Sbjct: 311 TWKYPSCVLVGDNSVGEFYSIALTNNKQQADTGTKMIHIGKNTRSIIISKGISAGNSANS 370 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRGLV+M A+ A N SQCDS+LIGD+AAANT+P IQV + +VEHEASTSKIGEDQL Sbjct: 371 YRGLVKMGPKAQGARNYSQCDSMLIGDRAAANTFPYIQVDNNTAKVEHEASTSKIGEDQL 430 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FYF QRGI E AV+ ++ GFC+ V LP EFA E D L++LKLEG+VG Sbjct: 431 FYFAQRGISEEDAVSMLVSGFCKDVLNELPMEFAAEADKLLSLKLEGTVG 480 Score = 20.8 bits (42), Expect(2) = 2e-61 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%) Frame = +2 Query: 11 WTQVETGXQYL-EVPKC 58 WTQVETG + P C Sbjct: 301 WTQVETGSAITWKYPSC 317
>YCF24_CYAPA (P48260) Hypothetical UPF0051 protein ycf24| Length = 486 Score = 233 bits (595), Expect(2) = 6e-61 Identities = 115/170 (67%), Positives = 138/170 (81%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 TWKYPS L+GD+++GEFYSVALT YQQADTGTKMIH GKN+RSRIISKGISAG S+N Sbjct: 317 TWKYPSCVLLGDNSIGEFYSVALTNRYQQADTGTKMIHIGKNTRSRIISKGISAGHSQNS 376 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRGLV++ A A N SQCDSLLIGD + ANT+P +Q+ + +VEHEASTSKIGE+Q+ Sbjct: 377 YRGLVKIGPKAVGARNYSQCDSLLIGDNSQANTFPHLQIKNPTAKVEHEASTSKIGEEQI 436 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FYF QRGI+ E+A++ +I GFCR VF +LP EFA E D L+ LKLEGSVG Sbjct: 437 FYFLQRGINAEEAISLIISGFCREVFNNLPMEFALEADKLLGLKLEGSVG 486 Score = 20.8 bits (42), Expect(2) = 6e-61 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%) Frame = +2 Query: 11 WTQVETGXQYL-EVPKC 58 WTQVETG + P C Sbjct: 307 WTQVETGSAITWKYPSC 323
>YCF24_ODOSI (P49530) Hypothetical UPF0051 protein ycf24 (ORF486)| Length = 486 Score = 227 bits (579), Expect = 2e-59 Identities = 118/183 (64%), Positives = 138/183 (75%), Gaps = 1/183 (0%) Frame = +3 Query: 3 KIYGHRLRQGXN-TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRI 179 KI ++ G N TWKYPS LVGD GEFYSVALT +YQQADTG+KMIH GKN+RSRI Sbjct: 304 KISWTQVETGSNITWKYPSCLLVGDKAKGEFYSVALTNNYQQADTGSKMIHVGKNTRSRI 363 Query: 180 ISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVE 359 +SKGISAG S+N YRGLV +++ A A N SQCDSLLIG+ + ANT+P I V + ++E Sbjct: 364 VSKGISAGNSKNTYRGLVNISNKAIGARNYSQCDSLLIGNLSNANTFPFISVQNPTAKIE 423 Query: 360 HEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEG 539 HEASTSKIGE+Q+FYF QRGI EK V MI GFC+ VF LP EFA E D L+ LKLEG Sbjct: 424 HEASTSKIGEEQIFYFLQRGIPIEKGVELMISGFCQEVFTELPLEFAAEADRLLTLKLEG 483 Query: 540 SVG 548 SVG Sbjct: 484 SVG 486
>YCF24_GUITH (O78473) Hypothetical UPF0051 protein ycf24| Length = 483 Score = 227 bits (578), Expect(2) = 6e-59 Identities = 114/170 (67%), Positives = 135/170 (79%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 TWKYPS LVG+D+VGEFYSVALT +YQQADTGTKMIH G+ S+SRIISKGISAG S+N Sbjct: 314 TWKYPSCILVGEDSVGEFYSVALTNNYQQADTGTKMIHVGRGSKSRIISKGISAGYSKNT 373 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRG V++N A + N+SQCDS+LIG + ANTYP IQV RVEHEASTSKI E+QL Sbjct: 374 YRGQVKININALGSINNSQCDSMLIGPYSQANTYPYIQVSNAMSRVEHEASTSKIEEEQL 433 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FYF QRGI E+A++ +I GFCR VF LP EFA E D L+++KLEG+VG Sbjct: 434 FYFLQRGISVEQAISLLISGFCRDVFVKLPMEFAVEADKLLSVKLEGTVG 483 Score = 20.8 bits (42), Expect(2) = 6e-59 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%) Frame = +2 Query: 11 WTQVETGXQYL-EVPKC 58 WTQVETG + P C Sbjct: 304 WTQVETGSAITWKYPSC 320
>YCF24_PORPU (P51240) Hypothetical UPF0051 protein ycf24 (ORF487)| Length = 487 Score = 223 bits (568), Expect = 4e-58 Identities = 110/170 (64%), Positives = 135/170 (79%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 TWKYP L GD++ GEFYSVALT +YQ+ADTGTKMIH G N++S+IISKGISAGKS+N Sbjct: 318 TWKYPGCILAGDNSQGEFYSVALTNNYQEADTGTKMIHIGNNTKSKIISKGISAGKSKNS 377 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRGLV++ + N+ N SQCDSLLIG + ANT+P IQV + +VEHEASTSKI EDQ+ Sbjct: 378 YRGLVKIGPQSFNSRNYSQCDSLLIGQSSQANTFPYIQVQNPTAKVEHEASTSKISEDQI 437 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FYF QRGI+ E++V+ MI GFC+ VF LP EFA E D L++LKLEG+VG Sbjct: 438 FYFLQRGINLEESVSLMISGFCKDVFNELPMEFAVEADRLLSLKLEGTVG 487
>YCF24_ANTSP (Q02857) Hypothetical UPF0051 protein in atpA 3'region (ORF 3)| (Fragment) Length = 297 Score = 211 bits (538), Expect(2) = 8e-55 Identities = 104/170 (61%), Positives = 130/170 (76%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 TWKYPS L G +++GEF S+ALT +YQQADTG+KMIH GKN++SRI+SKGISAG S N Sbjct: 128 TWKYPSCILAGHNSIGEFSSIALTNNYQQADTGSKMIHIGKNTKSRILSKGISAGYSANS 187 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRGLV++ A + N SQCDSLL+ + + ANT+P IQ ++EHEASTSKIGE+Q+ Sbjct: 188 YRGLVKIGPKAHYSRNYSQCDSLLLSNTSKANTFPYIQAQNPYTKIEHEASTSKIGEEQI 247 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FYF QRGI+ E A++ MI GFC+ V LP EFA E D L+NLKLEG+VG Sbjct: 248 FYFLQRGINLENAISLMISGFCKEVLNELPMEFAVEADRLLNLKLEGTVG 297 Score = 22.3 bits (46), Expect(2) = 8e-55 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%) Frame = +2 Query: 8 LWTQVETGXQYL-EVPKC 58 LWTQVETG + P C Sbjct: 117 LWTQVETGSAITWKYPSC 134
>YCF24_GALSU (P35912) Hypothetical UPF0051 protein in atpA 3'region (ORF X)| (Fragment) Length = 221 Score = 213 bits (542), Expect(2) = 8e-55 Identities = 107/170 (62%), Positives = 129/170 (75%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 TWKYPS L G+++ GEFYSVALT YQQADTG+KMIH GKNSRS+IISKGIS G S N Sbjct: 52 TWKYPSCILAGNNSKGEFYSVALTNHYQQADTGSKMIHIGKNSRSKIISKGISTGNSINS 111 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRG V+++ A A N SQCDSLLIG+ + ANT+P I+V S +EHEAS SKI E++L Sbjct: 112 YRGKVKVSLNASRARNYSQCDSLLIGNSSEANTFPYIEVYNRSSIIEHEASISKINEEKL 171 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FYF QRGI E+A++ ++ GFC+ VF LP EFA E D L+ LKLEGSVG Sbjct: 172 FYFMQRGISIEEAISLIVSGFCKEVFTELPLEFALEADKLLGLKLEGSVG 221 Score = 20.8 bits (42), Expect(2) = 8e-55 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%) Frame = +2 Query: 11 WTQVETGXQYL-EVPKC 58 WTQVETG + P C Sbjct: 42 WTQVETGSAITWKYPSC 58
>SUFB_SHIFL (Q83KW2) Protein sufB| Length = 495 Score = 204 bits (520), Expect = 1e-52 Identities = 101/170 (59%), Positives = 127/170 (74%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 TWKYPS L GD+++GEFYSVALT +QQADTGTKMIH GKN++S IISKGISAG S+N Sbjct: 326 TWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNS 385 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRGLV++ A NA N +QCDS+LIG A+T+P ++ S ++EHEA+TS+IGEDQL Sbjct: 386 YRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQL 445 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FY QRGI E A++ ++ GFC+ VF LP EFA E L+ + LE SVG Sbjct: 446 FYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 495
>SUFB_ECOLI (P77522) Protein sufB| Length = 495 Score = 204 bits (520), Expect = 1e-52 Identities = 101/170 (59%), Positives = 127/170 (74%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 TWKYPS L GD+++GEFYSVALT +QQADTGTKMIH GKN++S IISKGISAG S+N Sbjct: 326 TWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNS 385 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRGLV++ A NA N +QCDS+LIG A+T+P ++ S ++EHEA+TS+IGEDQL Sbjct: 386 YRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQL 445 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FY QRGI E A++ ++ GFC+ VF LP EFA E L+ + LE SVG Sbjct: 446 FYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG 495
>YCF24_CYACA (Q9TLX2) Hypothetical UPF0051 protein ycf24| Length = 483 Score = 194 bits (494), Expect = 2e-49 Identities = 95/170 (55%), Positives = 126/170 (74%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 TWKYPS L G + GEF+SV LT + Q+ADTGTKM+H G+ S+S +ISKGIS G S+N Sbjct: 314 TWKYPSCLLKGKRSTGEFFSVTLTNNAQEADTGTKMLHFGRQSKSLVISKGISGGVSKNT 373 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRGLV+++ A + N SQCDSLLIG + +NTYP + V + +VEHEA S+IGE+Q+ Sbjct: 374 YRGLVKISGSAIYSDNRSQCDSLLIGKGSESNTYPNLHVHNSLSKVEHEAFVSRIGEEQI 433 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FYFQQRGI+ E+A+ ++ GFC+ V LP EFA E + L+N+KLEGS+G Sbjct: 434 FYFQQRGINIEEALNMIVSGFCQDVCNKLPMEFALEANKLLNIKLEGSIG 483
>Y1496_MYCBO (P67126) Hypothetical UPF0051 protein Mb1496 [Contains: Endonuclease| PI-MtuHIIP (EC 3.1.-.-) (Mtu pps1 intein)] Length = 846 Score = 145 bits (367), Expect = 8e-35 Identities = 69/170 (40%), Positives = 108/170 (63%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 T KYP+V + G+ GE SVA + Q DTG KM+H N+ S I+SK ++ G R Sbjct: 677 TMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARGGGRTS 736 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRGLVQ+N GA + +S +CD+LL+ + ++TYP + + + HEA+ SK+ E+QL Sbjct: 737 YRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVSENQL 796 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FY RG+ ++A+A ++ GF + + LP E+A E++ L+ L++EG+VG Sbjct: 797 FYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 846
>Y1461_MYCTU (P67125) Hypothetical UPF0051 protein Rv1461/MT1508 [Contains:| Endonuclease PI-MtuHIIP (EC 3.1.-.-) (Mtu pps1 intein)] Length = 846 Score = 145 bits (367), Expect = 8e-35 Identities = 69/170 (40%), Positives = 108/170 (63%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 T KYP+V + G+ GE SVA + Q DTG KM+H N+ S I+SK ++ G R Sbjct: 677 TMKYPAVWMTGEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIVSKSVARGGGRTS 736 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRGLVQ+N GA + +S +CD+LL+ + ++TYP + + + HEA+ SK+ E+QL Sbjct: 737 YRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGHEATVSKVSENQL 796 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FY RG+ ++A+A ++ GF + + LP E+A E++ L+ L++EG+VG Sbjct: 797 FYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 846
>Y593_MYCLE (Q49689) Hypothetical UPF0051 protein ML0593 [Contains: Mle pps1| intein] Length = 869 Score = 145 bits (366), Expect = 1e-34 Identities = 69/170 (40%), Positives = 108/170 (63%) Frame = +3 Query: 39 TWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNC 218 T KYP+V + G+ GE SVA + Q DTG KM+H N+ S I+SK ++ G R Sbjct: 700 TMKYPAVWMTGEHAKGEVLSVAFAGEGQHQDTGAKMLHLASNTSSNIVSKSVARGGGRTS 759 Query: 219 YRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQL 398 YRGLVQ+N GA + +S +CD+LL+ + ++TYP + + + HEA+ SK+ E+QL Sbjct: 760 YRGLVQVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKVSENQL 819 Query: 399 FYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEGSVG 548 FY RG+ ++A+A ++ GF + + LP E+A E++ L+ L++EG+VG Sbjct: 820 FYLMSRGLAEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAVG 869
>Y1385_PYRHO (O50093) Hypothetical UPF0051 protein PH1385| Length = 446 Score = 80.9 bits (198), Expect = 3e-15 Identities = 48/158 (30%), Positives = 76/158 (48%) Frame = +3 Query: 66 VGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNS 245 VG++ E V L + D G +M +G+ R SK + +S RG + + Sbjct: 289 VGENGYVELNGVILGQKDWYIDLGGEMHLQGEGGRGINASKSVIMDESTVITRGKIVAEA 348 Query: 246 GAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGID 425 + S CD+LL+ DKA TYP + + HEA+ KI E++LFY RG+ Sbjct: 349 KKTKGHIS--CDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIKEEELFYLMSRGLS 406 Query: 426 HEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEG 539 EKA ++ GF + + +P EF E+ ++ L + G Sbjct: 407 EEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSG 444
>Y1150_METTH (O27218) Hypothetical UPF0051 protein MTH1150| Length = 410 Score = 73.6 bits (179), Expect = 5e-13 Identities = 40/164 (24%), Positives = 79/164 (48%) Frame = +3 Query: 48 YPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRG 227 YP+ G+++ F S+ + D G+++I +G+ S + ++S+ +S S+ RG Sbjct: 248 YPTAYCTGENSRVVFQSILGGQKDSVLDMGSRVILEGRGSSAEMVSRAVSKDSSQIYSRG 307 Query: 228 LVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYF 407 + +C L++ D + P ++ T + HEA+ KI E+++ Y Sbjct: 308 --HLAGRVPEVKGHLECHGLVLSDDSMIYAVPELEGSATELEMSHEAAVGKIAEEEVMYL 365 Query: 408 QQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEG 539 RG+ E+A + ++ GF LP E A E ++++ L+G Sbjct: 366 TSRGLTEEEAASMIVRGFLSMDITGLPPELAAETKRMLDMSLKG 409
>YB50_METTW (Q50519) Hypothetical UPF0051 protein MTH1150 homolog (ORF2)| Length = 410 Score = 72.0 bits (175), Expect = 1e-12 Identities = 39/164 (23%), Positives = 79/164 (48%) Frame = +3 Query: 48 YPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRG 227 YP+ G+++ F S+ + D G+++I +G+ S + ++S+ +S S+ RG Sbjct: 248 YPTAYCTGENSRVVFQSILGGQKDSVLDMGSRVILEGRGSSAEMVSRAVSKDASQIYSRG 307 Query: 228 LVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYF 407 + +C L++ D + P ++ T + HEA+ KI E+++ Y Sbjct: 308 --HLAGRVPEVKGHLECHGLVLSDDSMIYAVPELEGSATELEMSHEAAVGKIAEEEVMYL 365 Query: 408 QQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQEVDALMNLKLEG 539 RG+ ++A + ++ GF LP E A E ++++ L+G Sbjct: 366 TSRGLTEDEAASMIVRGFLSMDITGLPPELAAETKRMLDMSLKG 409
>Y2365_ARCFU (O30305) Hypothetical UPF0051 protein AF2365| Length = 369 Score = 69.3 bits (168), Expect = 1e-11 Identities = 41/147 (27%), Positives = 73/147 (49%) Frame = +3 Query: 48 YPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRG 227 YP+ V D F SV + + D+G++ + G+NSR+ IIS+ IS G + RG Sbjct: 208 YPTA-YVEKDATAIFNSVIVALEGSVVDSGSRAVLMGENSRAEIISRTISKG-GKIIARG 265 Query: 228 LVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYF 407 + A +C L++ + + P ++ + + HEA+ KI E+ +FY Sbjct: 266 --HIIGDAPEVKGHLECKGLMLSESGLIDAIPELEARYPNVELSHEAAIGKIAEEGIFYL 323 Query: 408 QQRGIDHEKAVAAMIGGFCRAVFEHLP 488 RG+ ++A++A++ GF + LP Sbjct: 324 MSRGLSRDEAISAIVRGFMEIEIKGLP 350
>SUFD_ECOLI (P77689) Protein sufD| Length = 423 Score = 64.3 bits (155), Expect = 3e-10 Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 1/163 (0%) Frame = +3 Query: 54 SVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLV 233 S +L G+++ S+A+ + DT T + H SR + K I + K R + GL+ Sbjct: 258 STQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLI 317 Query: 234 QMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQ 413 + A ++LL+G A +T P +++ + H A+ +I ++Q+FY + Sbjct: 318 NVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRS 377 Query: 414 RGIDHEKAVAAMIGGFCRAVFEHLPYE-FAQEVDALMNLKLEG 539 RGI+ + A +I F + E L E Q+V A + +L G Sbjct: 378 RGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQRLPG 420
>Y076_SYNY3 (Q55792) Hypothetical UPF0051 protein slr0076| Length = 453 Score = 48.9 bits (115), Expect = 1e-05 Identities = 30/137 (21%), Positives = 63/137 (45%) Frame = +3 Query: 78 TVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAEN 257 T EF ++ + Q +DT + + + + + K I ++ + G V + A+ Sbjct: 300 TKTEFLALTILAGRQVSDTHSTIALNHPHGATNQLHKCIVDEYAQAVFSGKVLVPQAAQL 359 Query: 258 AYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKA 437 +L++ KA NT P +Q+ + + H A+ S++ D++FY + RG++ A Sbjct: 360 TNAQQLNRNLVLSSKARINTKPELQITADNVKCSHGATISQLEADEVFYLRSRGLNDYDA 419 Query: 438 VAAMIGGFCRAVFEHLP 488 +I F + + +P Sbjct: 420 RHLLIDAFAGEILDQIP 436
>Y1497_MYCBO (P59973) Hypothetical UPF0051 protein Mb1497| Length = 397 Score = 38.5 bits (88), Expect = 0.018 Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 10/145 (6%) Frame = +3 Query: 57 VELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SRN 215 V G E + D Q ++ + H + +S ++ KG G + Sbjct: 218 VRFCGAGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHT 277 Query: 216 CYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVE---HEASTSKIG 386 + G V + + A +L++ D A A++ P +++ +G + H ++T + Sbjct: 278 VWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEI--ETGEIVGAGHASATGRFD 335 Query: 387 EDQLFYFQQRGIDHEKAVAAMIGGF 461 ++QLFY + RGI +A ++ GF Sbjct: 336 DEQLFYLRSRGIPEAQARRLVVRGF 360
>Y1462_MYCTU (O53153) Hypothetical UPF0051 protein Rv1462/MT1509| Length = 397 Score = 38.5 bits (88), Expect = 0.018 Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 10/145 (6%) Frame = +3 Query: 57 VELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SRN 215 V G E + D Q ++ + H + +S ++ KG G + Sbjct: 218 VRFCGAGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHT 277 Query: 216 CYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTSGRVE---HEASTSKIG 386 + G V + + A +L++ D A A++ P +++ +G + H ++T + Sbjct: 278 VWVGDVLIRAQATGTDTFEVNRNLVLTDGARADSVPNLEI--ETGEIVGAGHASATGRFD 335 Query: 387 EDQLFYFQQRGIDHEKAVAAMIGGF 461 ++QLFY + RGI +A ++ GF Sbjct: 336 DEQLFYLRSRGIPEAQARRLVVRGF 360
>Y594_MYCLE (Q49682) Hypothetical UPF0051 protein ML0594| Length = 392 Score = 36.6 bits (83), Expect = 0.070 Identities = 29/144 (20%), Positives = 60/144 (41%), Gaps = 8/144 (5%) Frame = +3 Query: 54 SVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGK-------SR 212 +V G E + D Q ++ + H + +S ++ KG G + Sbjct: 214 NVRFSGPGGDAELLGLYFADDGQHLESRLLVDHAHPDCKSNVLYKGALQGDPVSSRPDAH 273 Query: 213 NCYRGLVQMNSGAENAYNSSQCDSLLIGDKAAANTYPTIQVGCTS-GRVEHEASTSKIGE 389 + G V ++ A +L++ + A++ P +++ H ++T + + Sbjct: 274 TVWVGDVLIHPEATGTDTFEVNRNLVLTNGVRADSVPNLEIETDEIVGAGHASATGRFDD 333 Query: 390 DQLFYFQQRGIDHEKAVAAMIGGF 461 +QLFY + RGI E+A ++ GF Sbjct: 334 EQLFYLRSRGIGEEQARRLLVRGF 357
>MRC2_RAT (Q4TU93) Macrophage mannose receptor 2 precursor (Endocytic| receptor 180) (CD280 antigen) Length = 1480 Score = 36.6 bits (83), Expect = 0.070 Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 8/107 (7%) Frame = +3 Query: 246 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 413 G E +N S C+ L I KA + T + GC G H S +GEDQ+ Y Sbjct: 485 GPEGRWNDSPCNQSLPSICKKAGRLSQGTAEEDHGCRKGWTWHSPSCYWLGEDQVIYSDA 544 Query: 414 RGI--DHEKAVAAMIGGFCRAVFEHLPYEFAQEV--DALMNLKLEGS 542 R + DH + + F +A L Y + E AL +L GS Sbjct: 545 RRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQDLNSTGS 591
>Y034_METJA (Q60349) Hypothetical UPF0051 protein MJ0034| Length = 316 Score = 36.2 bits (82), Expect = 0.091 Identities = 25/119 (21%), Positives = 56/119 (47%) Frame = +3 Query: 102 ALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCD 281 A+ +D + + K+ G+N++ I S+G + S+ + +++ A + C Sbjct: 198 AIKEDVVKVNEVVKL--NGENAKCIIKSRGAAMDNSKISLK--LKIEGNAPYSKGHIDCA 253 Query: 282 SLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGG 458 ++ G+ A + P + V R+ HEA+ + + QL +G+D ++A ++ G Sbjct: 254 EIVKGN-AEVESIPIVVVRDDKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKG 311
>MRC2_MOUSE (Q64449) Macrophage mannose receptor 2 precursor (Lectin lambda)| (CD280 antigen) Length = 1479 Score = 34.7 bits (78), Expect = 0.26 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 8/107 (7%) Frame = +3 Query: 246 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 413 G E +N S C+ L I KA + + GC G H S +GEDQ+ Y Sbjct: 485 GPEGRWNDSPCNQSLPSICKKAGRLSQGAAEEDHGCRKGWTWHSPSCYWLGEDQVIYSDA 544 Query: 414 RGI--DHEKAVAAMIGGFCRAVFEHLPYEFAQEV--DALMNLKLEGS 542 R + DH + + F +A L Y + E AL +L GS Sbjct: 545 RRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQDLNSTGS 591
>MRC2_HUMAN (Q9UBG0) Macrophage mannose receptor 2 precursor (Urokinase| receptor-associated protein) (Endocytic receptor 180) (CD280 antigen) Length = 1479 Score = 34.7 bits (78), Expect = 0.26 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 8/107 (7%) Frame = +3 Query: 246 GAENAYNSSQCDSLL--IGDKAAANTYPTIQV--GCTSGRVEHEASTSKIGEDQLFYFQQ 413 G E +N S C+ L I KA + + GC G H S +GEDQ+ Y + Sbjct: 486 GPEGRWNDSPCNQSLPSICKKAGQLSQGAAEEDHGCRKGWTWHSPSCYWLGEDQVTYSEA 545 Query: 414 RGI--DHEKAVAAMIGGFCRAVFEHLPYEFAQEV--DALMNLKLEGS 542 R + DH + + F +A L Y + E AL +L GS Sbjct: 546 RRLCTDHGSQLVTITNRFEQAFVSSLIYNWEGEYFWTALQDLNSTGS 592
>BCL6B_HUMAN (Q8N143) B-cell CLL/lymphoma 6 member B protein (Bcl6-associated| zinc finger protein) (Zinc finger protein 62) Length = 480 Score = 34.3 bits (77), Expect = 0.35 Identities = 44/172 (25%), Positives = 66/172 (38%), Gaps = 7/172 (4%) Frame = -2 Query: 510 PPPGQTRKEGVQRRPYRIHRSWLQRPFHDLSPFAESKTAGPLQFWMCLLHAQHGH*YNPP 331 PPPG R+ P RS Q P SP + K ++ +L++Q + Sbjct: 156 PPPGSPRRSEGHPDPPTESRSCSQGPPSPASP--DPKACNWKKYKYIVLNSQASQAGSLV 213 Query: 330 EWWDRC*QQPCPQSAMNHTEKSYTHSLHLNSS----GPAHGSNSLTSPLRYPWI*SGCVN 163 +R QPCPQ+ + +++ + S +SS GP G S SP + Sbjct: 214 G--ERSSGQPCPQARLPSGDEASSSSSSSSSSSSEEGPIPGPQSRLSP-------TAATV 264 Query: 162 SSPCGSSLS---LYRPAGNP*SALPSRTLQRCRPQPAPHLGTSRYCXPVSTC 16 CG+ S L S PS +R RP P + + C V+ C Sbjct: 265 QFKCGAPASTPYLLTSQAQDTSGSPS---ERARPLPGSEFFSCQNCEAVAGC 313
>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic| isoform 3 (EC 1.6.5.4) (MDAR 3) Length = 434 Score = 32.7 bits (73), Expect = 1.0 Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 3/122 (2%) Frame = +3 Query: 156 GKNSRSRIISKGISAGKSRNCYRGLVQMNSGA---ENAYNSSQCDSLLIGDKAAANTYPT 326 G+ + I+ G+ A + ++G V+ + G + + +S D +GD A T+P Sbjct: 247 GRTLEADIVIVGVGAKPLTSLFKGQVEEDKGGIKTDAFFKTSVPDVYAVGDVA---TFPL 303 Query: 327 IQVGCTSGRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFEHLPYEFAQE 506 G RVEH + K E + KA+ A GG +++LP+ +++ Sbjct: 304 KMYGDVR-RVEHVDHSRKSAEQAV-----------KAIKAAEGGAAVEEYDYLPFFYSRS 351 Query: 507 VD 512 D Sbjct: 352 FD 353
>Y3349_STRCO (Q9X8H2) Hypothetical protein SCO3349| Length = 271 Score = 31.6 bits (70), Expect = 2.2 Identities = 20/71 (28%), Positives = 29/71 (40%) Frame = +2 Query: 11 WTQVETGXQYLEVPKCGAGWGRHRWRVLLGSAD*GLPAGRYRDKDDPQGEEFTQPDYIQG 190 W + +V +C W RW + GS G+ AGR D G F+ D + Sbjct: 33 WVEFPDPADDEQVFRCDLTWLTSRWNCIFGSGCQGIQAGRADDGCCSLGAHFSDED-DEK 91 Query: 191 YLSGEVKELLP 223 ++G V L P Sbjct: 92 RVAGHVARLTP 102
>T7L1D_XENLA (P70064) Transcription factor 7-like 1-D (HMG box transcription| factor 3-D) (TCF-3-D) (xTcf-3d) Length = 550 Score = 31.6 bits (70), Expect = 2.2 Identities = 43/170 (25%), Positives = 64/170 (37%) Frame = -2 Query: 561 NQELSQLIPPASGS*VHPPPGQTRKEGVQRRPYRIHRSWLQRPFHDLSPFAESKTAGPLQ 382 N+ S PP H P K G+ R P+ S P++ LSP A + PL Sbjct: 176 NEHFSPGTPPG-----HLSPEIDPKTGIPRPPHPSELS----PYYPLSPGAVGQIPHPLG 226 Query: 381 FWMCLLHAQHGH*YNPPEWWDRC*QQPCPQSAMNHTEKSYTHSLHLNSSGPAHGSNSLTS 202 + L+ Q Y+ P R P P AMN + S S P + TS Sbjct: 227 W---LVPQQGQPMYSIPPGGFR---HPYPALAMNASMSSLVSSRFSPHMVPPPHHSLHTS 280 Query: 201 PLRYPWI*SGCVNSSPCGSSLSLYRPAGNP*SALPSRTLQRCRPQPAPHL 52 + +P I S V P ++S P ++ S + + + PH+ Sbjct: 281 GIPHPAIVSPIVKQEPSSGNIS-------PNLSMKSNVVVKKEEEKKPHI 323
>Y779_LACPL (Q88YI4) UPF0042 protein lp_0779| Length = 294 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +3 Query: 270 SQCDSLLIGDKAAANTYPTIQVGCTSGRVEHEASTSKIGE 389 S +S++ G +A + TI +GCT G+ A T +IGE Sbjct: 230 SMLESIMPGYEAEGKSSLTIAIGCTGGQHRSVALTQRIGE 269
>GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Spore germination protein 270-6) (Cellulase) Length = 705 Score = 30.4 bits (67), Expect = 5.0 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +2 Query: 500 PGGGCTYEPEAGGISWLSSW 559 PGGG TY P GG++W+ W Sbjct: 318 PGGGVTYTP--GGLAWIRQW 335
>EATA_ECOLI (Q84GK0) Serine protease eatA precursor (EC 3.4.21.-) (Secreted| autotransporter protein eatA) (ETEC autotransporter A) Length = 1364 Score = 30.4 bits (67), Expect = 5.0 Identities = 18/66 (27%), Positives = 27/66 (40%) Frame = +3 Query: 12 GHRLRQGXNTWKYPSVELVGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKG 191 G+R NTW P +ELV Y K + D G ++ K K+ I G Sbjct: 1220 GYRYHMSENTWVEPQMELV--------YGSVSGKSFNWKDQGMQLSMKDKDYHPLIGRTG 1271 Query: 192 ISAGKS 209 + G++ Sbjct: 1272 VDVGRA 1277
>T7L1B_XENLA (Q90ZB6) Transcription factor 7-like 1-B (HMG box transcription| factor 3-B) (TCF-3-B) (xTcf-3) Length = 551 Score = 30.4 bits (67), Expect = 5.0 Identities = 39/142 (27%), Positives = 54/142 (38%) Frame = -2 Query: 561 NQELSQLIPPASGS*VHPPPGQTRKEGVQRRPYRIHRSWLQRPFHDLSPFAESKTAGPLQ 382 N+ S PP H P K G+ R P+ S P++ LSP A + PL Sbjct: 177 NEHFSPGTPPG-----HLSPEIDPKTGIPRPPHPSELS----PYYPLSPGAVGQIPHPLG 227 Query: 381 FWMCLLHAQHGH*YNPPEWWDRC*QQPCPQSAMNHTEKSYTHSLHLNSSGPAHGSNSLTS 202 + L+ Q Y+ P R P P AMN + S S P + TS Sbjct: 228 W---LVPQQGQPMYSIPPGGFR---HPYPALAMNASMSSLVSSRFSPHMVPPPHHSLHTS 281 Query: 201 PLRYPWI*SGCVNSSPCGSSLS 136 + +P I S V P ++S Sbjct: 282 GIPHPAIVSPIVKQEPSSGNIS 303
>T7L1A_XENLA (P70062) Transcription factor 7-like 1-A (HMG box transcription| factor 3-A) (TCF-3-A) (xTcf-3) Length = 554 Score = 30.4 bits (67), Expect = 5.0 Identities = 39/142 (27%), Positives = 54/142 (38%) Frame = -2 Query: 561 NQELSQLIPPASGS*VHPPPGQTRKEGVQRRPYRIHRSWLQRPFHDLSPFAESKTAGPLQ 382 N+ S PP H P K G+ R P+ S P++ LSP A + PL Sbjct: 177 NEHFSPGTPPG-----HLSPEIDPKTGIPRPPHPSELS----PYYPLSPGAVGQIPHPLG 227 Query: 381 FWMCLLHAQHGH*YNPPEWWDRC*QQPCPQSAMNHTEKSYTHSLHLNSSGPAHGSNSLTS 202 + L+ Q Y+ P R P P AMN + S S P + TS Sbjct: 228 W---LVPPQGQPMYSIPPGGFR---HPYPALAMNASMSSLVSSRFSPHMVPPPHHSLHTS 281 Query: 201 PLRYPWI*SGCVNSSPCGSSLS 136 + +P I S V P ++S Sbjct: 282 GIPHPAIVSPIVKQEPSSGNIS 303
>NEUV_CHICK (P24787) Vasotocin-neurophysin VT precursor [Contains: Vasotocin| (VT); Neurophysin VT] Length = 161 Score = 30.0 bits (66), Expect = 6.5 Identities = 14/43 (32%), Positives = 17/43 (39%) Frame = +3 Query: 156 GKNSRSRIISKGISAGKSRNCYRGLVQMNSGAENAYNSSQCDS 284 G +R R GI G CY G + AE Y S C + Sbjct: 45 GPGNRGRCFGPGICCGAELGCYLGTAETRRCAEEDYMPSPCQA 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 108,078,931 Number of Sequences: 219361 Number of extensions: 2465307 Number of successful extensions: 5775 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 5565 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5771 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
