| Clone Name | baal34p12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB079636.1| Oryza sativa (japonica cultivar-group) OsHMGB2 mRNA for high mobility group box protein 2, complete cds Length = 634 Score = 301 bits (152), Expect = 2e-78 Identities = 280/322 (86%), Gaps = 3/322 (0%) Strand = Plus / Plus Query: 47 ccatgaagggcaaggccgacgcctccaagaagggcgagggcaggctcaaggccgccggcg 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccatgaagggcaaggccgacgcctccaagaagggcgagggcaggctcaaggccgccggcg 180 Query: 107 gcgccagcaagaggaagaaggccgccgctgccgctggcaagcccaagcgcccgccctccg 166 ||||| | ||| ||||||||||||||||| | |||||||| ||||||||||| || | Sbjct: 181 gcgccgggaagcggaagaaggccgccgctagc---ggcaagccgaagcgcccgccgtctg 237 Query: 167 ccttcttcgtcttcatgtctgacttcaggcagcagtacaacgcggagaaccccaacaaca 226 | |||||||||||||||||||| ||||||||| ||||| | || | | | || ||||| Sbjct: 238 ctttcttcgtcttcatgtctgagttcaggcaggagtaccaggcagcgcatcctggcaaca 297 Query: 227 agaatgtcgccaacgtgagcaaggctgcaggtgagaagtggagatctatgtctgatgagg 286 ||| ||||||| |||||||||||||||||| ||||||||| || |||||||||| | | Sbjct: 298 agagtgtcgccgccgtgagcaaggctgcaggggagaagtggcgagctatgtctgagcaag 357 Query: 287 acaaagcaccttatgtggagaaggctggacagaagaagcaggactatgagaagaccaaag 346 | || |||||||||||||| |||||||| || |||||||||||||| ||||||||||| | Sbjct: 358 agaaggcaccttatgtggacaaggctggccaaaagaagcaggactacgagaagaccaagg 417 Query: 347 ccagcttcgagaacaaggagag 368 ||| |||||| || |||||||| Sbjct: 418 ccaacttcgataagaaggagag 439 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 442 ggtagcgatgaggataatgaagacgacgatgagtaaatagtgtatcc 488 |||||||||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 525 ggtagcgatgaggaaaatgaggacgatgaagagtaaatagtgtatcc 571
>emb|Y08297.1|ZMHMGC1 Z.mays mRNA for HMGc1 protein Length = 784 Score = 190 bits (96), Expect = 4e-45 Identities = 293/358 (81%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 44 ccaccatgaagggcaaggccgacgcctccaagaagggcgagggcaggctcaaggccgccg 103 ||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||| | || Sbjct: 84 ccaccatgaagggcaaggctgacacctccaagaaggacgagggcaggctccgggcgggcg 143 Query: 104 gcggcgccagcaagaggaagaaggccgccgctgccgctggcaagcccaagcgcccgccct 163 ||| |||| | ||| | |||||||||||||| || ||||||||||||||||||||| Sbjct: 144 gcgccgccggaaagcgcaagaaggccgccgcgagcg---gcaagcccaagcgcccgccct 200 Query: 164 ccgccttcttcgtcttcatgtctgacttcaggcagcagtacaacgcggagaaccccaaca 223 ||||||||||||||||||||||||| ||||||||| |||| | ||| | |||| || Sbjct: 201 ccgccttcttcgtcttcatgtctgaattcaggcaggagtatcaggcgctgcaccctggca 260 Query: 224 acaagaatgtcgccaacgtgagcaaggctgcaggtgagaagtggagatctatgtctgatg 283 |||||| || || | |||||||||||| ||||| || |||||| | ||||||| ||| Sbjct: 261 acaagagcgttgcgaccgtgagcaaggcagcaggggaaaagtggcgtgctatgtcagatc 320 Query: 284 aggacaaagcaccttatgtggagaaggctggacagaagaagcaggactatgagaagacca 343 | || || ||| |||||||| | |||||||||||||||||||||||||||||||| | Sbjct: 321 aagagaagcaaccatatgtggaccaagctggacagaagaagcaggactatgagaagacta 380 Query: 344 aagccagcttcgagaacaaggagagtgtgagctccaagaaggccaagactcaggatga 401 | || | ||| || || |||||||| ||||| |||||||| |||||| ||||||| Sbjct: 381 aggcaaactttgataagaaggagagcacaagctcaaagaaggctaagactgaggatga 438
>gb|AF440222.1| Zea mays cultivar B73 HMG-like nucleosome/chromatin assembly factor D (nfd104) mRNA, complete cds Length = 795 Score = 182 bits (92), Expect = 1e-42 Identities = 292/358 (81%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 44 ccaccatgaagggcaaggccgacgcctccaagaagggcgagggcaggctcaaggccgccg 103 ||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||| | || Sbjct: 87 ccaccatgaagggcaaggctgacacctccaagaaggacgagggcaggctccgggcgggcg 146 Query: 104 gcggcgccagcaagaggaagaaggccgccgctgccgctggcaagcccaagcgcccgccct 163 ||| |||| | ||| | |||||||||||||| || ||||||||||||||||||||| Sbjct: 147 gcgccgccggaaagcgcaagaaggccgccgcgagcg---gcaagcccaagcgcccgccct 203 Query: 164 ccgccttcttcgtcttcatgtctgacttcaggcagcagtacaacgcggagaaccccaaca 223 |||||||||||| |||||||||||| ||||||||| |||| | ||| | |||| || Sbjct: 204 ccgccttcttcgccttcatgtctgaattcaggcaggagtatcaggcgctgcaccctggca 263 Query: 224 acaagaatgtcgccaacgtgagcaaggctgcaggtgagaagtggagatctatgtctgatg 283 |||||| || || | |||||||||||| ||||| || |||||| | ||||||| ||| Sbjct: 264 acaagagcgttgcgaccgtgagcaaggcagcaggggaaaagtggcgtgctatgtcagatc 323 Query: 284 aggacaaagcaccttatgtggagaaggctggacagaagaagcaggactatgagaagacca 343 | || || ||| |||||||| | |||||||||||||||||||||||||||||||| | Sbjct: 324 aagagaagcaaccatatgtggaccaagctggacagaagaagcaggactatgagaagacta 383 Query: 344 aagccagcttcgagaacaaggagagtgtgagctccaagaaggccaagactcaggatga 401 | || | ||| || || |||||||| ||||| |||||||| |||||| ||||||| Sbjct: 384 aggcaaactttgataagaaggagagcacaagctcaaagaaggctaagactgaggatga 441
>emb|Y08298.1|ZMHMGC2 Z.mays mRNA for HMGc2 protein Length = 828 Score = 151 bits (76), Expect = 4e-33 Identities = 242/296 (81%), Gaps = 6/296 (2%) Strand = Plus / Plus Query: 49 atgaagggcaaggccgacgcctccaagaagggcgagggcaggctcaaggccgccggcggc 108 ||||||||||||||| ||||||||||||||| |||| ||||||| ||||| ||||||| Sbjct: 1 atgaagggcaaggccaacgcctccaagaaggatgaggccaggctccgggccggcggcggc 60 Query: 109 g---ccagcaagaggaagaaggccgccgctgccgctggcaagcccaagcgcccgccctcc 165 | || | ||| | |||||||||||||| || |||||||||||||||| |||||| Sbjct: 61 ggcgccggaaagcgcaagaaggccgccgcgagcg---gcaagcccaagcgccctccctcc 117 Query: 166 gccttcttcgtcttcatgtctgacttcaggcagcagtacaacgcggagaaccccaacaac 225 ||||||||||||||||||||||| ||||||||| ||||| | ||| || |||| |||| Sbjct: 118 gccttcttcgtcttcatgtctgaattcaggcaggagtaccaggcgcagcaccctggcaac 177 Query: 226 aagaatgtcgccaacgtgagcaaggctgcaggtgagaagtggagatctatgtctgatgag 285 |||| || || |||||||||||| ||||| || |||||| | |||||||| || | Sbjct: 178 aagagcgttgcggccgtgagcaaggcagcaggggaaaagtggcgctctatgtcagagcaa 237 Query: 286 gacaaagcaccttatgtggagaaggctggacagaagaagcaggactatgagaagac 341 || || ||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 238 gagaagcaaccctatgtggaccaagctgggcagaagaagcaggactatgagaagac 293
>gb|BT016444.1| Zea mays clone Contig277 mRNA sequence Length = 1158 Score = 103 bits (52), Expect = 7e-19 Identities = 140/168 (83%), Gaps = 6/168 (3%) Strand = Plus / Plus Query: 65 acgcctccaagaagggcgagggcaggctcaaggc---cgccggcggcgccagcaagagga 121 ||||||||||||||| |||||||||||| ||| || |||||||||| | ||| | Sbjct: 2 acgcctccaagaaggatgagggcaggctccgggccggcggcggcggcgccggaaagctca 61 Query: 122 agaaggccgccgctgccgctggcaagcccaagcgcccgccctccgccttcttcgtcttca 181 ||||||||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct: 62 agaaggccgccgcgagc---ggcaagcccaagcgccctccctccgccttcttcgtcttca 118 Query: 182 tgtctgacttcaggcagcagtacaacgcggagaaccccaacaacaaga 229 ||||||| ||||||||| ||||| | ||| || |||| | |||||||| Sbjct: 119 tgtctgaattcaggcaggagtaccaggcgcagcaccctagcaacaaga 166 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 241 gtgagcaaggctgcaggtgagaagtggagatctatgtctgatgaggacaaagcaccttat 300 ||||||||||| ||||| || |||||| | |||||||| || | || || ||| ||| Sbjct: 266 gtgagcaaggcagcaggggaaaagtggcgctctatgtcagagcaagagaagcaaccctat 325 Query: 301 gtggagaaggctggacagaagaagcaggactatgagaagac 341 ||||| | ||||| |||||||||||||||||||||||||| Sbjct: 326 gtggaccaagctgggcagaagaagcaggactatgagaagac 366
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 93.7 bits (47), Expect = 7e-16 Identities = 85/97 (87%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 88 aggctcaaggccgccggcggcgccagcaagaggaagaaggccgccgctgccgctggcaag 147 |||||||||||||||||||||||| | ||| ||||||||||||||||| | |||||| Sbjct: 27244066 aggctcaaggccgccggcggcgccgggaagcggaagaaggccgccgctagc---ggcaag 27244122 Query: 148 cccaagcgcccgccctccgccttcttcgtcttcatgt 184 || ||||||||||| || || |||||||||||||||| Sbjct: 27244123 ccgaagcgcccgccgtctgctttcttcgtcttcatgt 27244159 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 47 ccatgaagggcaaggccgacgcctccaagaagggcgagggcagg 90 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27243896 ccatgaagggcaaggccgacgcctccaagaagggcgagggcagg 27243939 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 292 gcaccttatgtggagaaggctggacagaagaagcaggactatgagaagaccaaagccagc 351 |||||||||||||| |||||||| || |||||||||||||| ||||||||||| |||| | Sbjct: 27244784 gcaccttatgtggacaaggctggccaaaagaagcaggactacgagaagaccaaggccaac 27244843 Query: 352 ttcga 356 ||||| Sbjct: 27244844 ttcga 27244848 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 241 gtgagcaaggctgcaggtgagaagtggagatctatgtctga 281 ||||||||||||||||| ||||||||| || |||||||||| Sbjct: 27244441 gtgagcaaggctgcaggggagaagtggcgagctatgtctga 27244481 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 452 aggataatgaagacgacgatgagtaaatagtgtatcc 488 |||| ||||| ||||| || ||||||||||||||||| Sbjct: 27245148 aggaaaatgaggacgatgaagagtaaatagtgtatcc 27245184 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 4135351 tcaaggccgccggcggcgcc 4135370
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 93.7 bits (47), Expect = 7e-16 Identities = 85/97 (87%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 88 aggctcaaggccgccggcggcgccagcaagaggaagaaggccgccgctgccgctggcaag 147 |||||||||||||||||||||||| | ||| ||||||||||||||||| | |||||| Sbjct: 140515 aggctcaaggccgccggcggcgccgggaagcggaagaaggccgccgctagc---ggcaag 140571 Query: 148 cccaagcgcccgccctccgccttcttcgtcttcatgt 184 || ||||||||||| || || |||||||||||||||| Sbjct: 140572 ccgaagcgcccgccgtctgctttcttcgtcttcatgt 140608 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 47 ccatgaagggcaaggccgacgcctccaagaagggcgagggcagg 90 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140345 ccatgaagggcaaggccgacgcctccaagaagggcgagggcagg 140388 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 292 gcaccttatgtggagaaggctggacagaagaagcaggactatgagaagaccaaagccagc 351 |||||||||||||| |||||||| || |||||||||||||| ||||||||||| |||| | Sbjct: 141233 gcaccttatgtggacaaggctggccaaaagaagcaggactacgagaagaccaaggccaac 141292 Query: 352 ttcga 356 ||||| Sbjct: 141293 ttcga 141297 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 241 gtgagcaaggctgcaggtgagaagtggagatctatgtctga 281 ||||||||||||||||| ||||||||| || |||||||||| Sbjct: 140890 gtgagcaaggctgcaggggagaagtggcgagctatgtctga 140930 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 452 aggataatgaagacgacgatgagtaaatagtgtatcc 488 |||| ||||| ||||| || ||||||||||||||||| Sbjct: 141597 aggaaaatgaggacgatgaagagtaaatagtgtatcc 141633
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 93.7 bits (47), Expect = 7e-16 Identities = 85/97 (87%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 88 aggctcaaggccgccggcggcgccagcaagaggaagaaggccgccgctgccgctggcaag 147 |||||||||||||||||||||||| | ||| ||||||||||||||||| | |||||| Sbjct: 94737 aggctcaaggccgccggcggcgccgggaagcggaagaaggccgccgctagc---ggcaag 94793 Query: 148 cccaagcgcccgccctccgccttcttcgtcttcatgt 184 || ||||||||||| || || |||||||||||||||| Sbjct: 94794 ccgaagcgcccgccgtctgctttcttcgtcttcatgt 94830 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 47 ccatgaagggcaaggccgacgcctccaagaagggcgagggcagg 90 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94567 ccatgaagggcaaggccgacgcctccaagaagggcgagggcagg 94610 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 292 gcaccttatgtggagaaggctggacagaagaagcaggactatgagaagaccaaagccagc 351 |||||||||||||| |||||||| || |||||||||||||| ||||||||||| |||| | Sbjct: 95455 gcaccttatgtggacaaggctggccaaaagaagcaggactacgagaagaccaaggccaac 95514 Query: 352 ttcga 356 ||||| Sbjct: 95515 ttcga 95519 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 241 gtgagcaaggctgcaggtgagaagtggagatctatgtctga 281 ||||||||||||||||| ||||||||| || |||||||||| Sbjct: 95112 gtgagcaaggctgcaggggagaagtggcgagctatgtctga 95152 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 452 aggataatgaagacgacgatgagtaaatagtgtatcc 488 |||| ||||| ||||| || ||||||||||||||||| Sbjct: 95819 aggaaaatgaggacgatgaagagtaaatagtgtatcc 95855
>emb|AJ131374.1|ZMA131374 Zea mays hmgc1 gene, exons 1-7 Length = 2929 Score = 85.7 bits (43), Expect = 2e-13 Identities = 43/43 (100%) Strand = Plus / Plus Query: 142 ggcaagcccaagcgcccgccctccgccttcttcgtcttcatgt 184 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1381 ggcaagcccaagcgcccgccctccgccttcttcgtcttcatgt 1423 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 44 ccaccatgaagggcaaggccgacgcctccaagaagggcgagggcagg 90 ||||||||||||||||||| ||| |||||||||||| |||||||||| Sbjct: 1175 ccaccatgaagggcaaggctgacacctccaagaaggacgagggcagg 1221 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 310 gctggacagaagaagcaggactatgagaagac 341 |||||||||||||||||||||||||||||||| Sbjct: 2071 gctggacagaagaagcaggactatgagaagac 2102 Score = 40.1 bits (20), Expect = 9.2 Identities = 38/43 (88%), Gaps = 2/43 (4%) Strand = Plus / Plus Query: 466 gacgatgagtaaatagtgtatccaag--cacgaggtagcaaat 506 ||||||||||||| | ||| |||||| ||||||||||||||| Sbjct: 2413 gacgatgagtaaacactgtctccaaggtcacgaggtagcaaat 2455
>gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D protein NFD106 (nfd106) mRNA, complete cds Length = 625 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgccttcttcgtcttcatg 183 ||||| ||||||| ||||| ||||||||||| |||||||| Sbjct: 114 caagcgcaagcgctcgcccaccgccttcttcctcttcatg 153
>emb|Z11540.1|TAHMGW T.aestivum mRNA for high mobility group protein (HMGW) Length = 923 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgccttcttcgtcttcatg 183 |||||||||| | |||| ||||||||||||||||||||| Sbjct: 196 caagcccaagagggcgccatccgccttcttcgtcttcatg 235
>emb|AL662949.4|OSJN00144 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I21, complete sequence Length = 127162 Score = 48.1 bits (24), Expect = 0.038 Identities = 42/48 (87%) Strand = Plus / Plus Query: 88 aggctcaaggccgccggcggcgccagcaagaggaagaaggccgccgct 135 ||||||||||| ||||||||| | || ||| |||||||||| |||||| Sbjct: 103884 aggctcaaggctgccggcggctctaggaagcggaagaaggctgccgct 103931
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 48.1 bits (24), Expect = 0.038 Identities = 42/48 (87%) Strand = Plus / Minus Query: 88 aggctcaaggccgccggcggcgccagcaagaggaagaaggccgccgct 135 ||||||||||| ||||||||| | || ||| |||||||||| |||||| Sbjct: 141326 aggctcaaggctgccggcggctctaggaagcggaagaaggctgccgct 141279
>gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleosome/chromatin assembly factor D (nfd106) mRNA, complete cds Length = 655 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgccttcttcgtcttcatg 183 ||||| ||||||| ||||| ||||||||||| |||||||| Sbjct: 116 caagcgcaagcgctcgcccaccgccttcttcctcttcatg 155
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.038 Identities = 42/48 (87%) Strand = Plus / Minus Query: 88 aggctcaaggccgccggcggcgccagcaagaggaagaaggccgccgct 135 ||||||||||| ||||||||| | || ||| |||||||||| |||||| Sbjct: 4513594 aggctcaaggctgccggcggctctaggaagcggaagaaggctgccgct 4513547
>gb|AY108096.1| Zea mays PCO136722 mRNA sequence Length = 882 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgccttcttcgtcttcatg 183 ||||| ||||||| ||||| ||||||||||| |||||||| Sbjct: 330 caagcgcaagcgctcgcccaccgccttcttcctcttcatg 369
>emb|AJ006708.1|ZMA6708 Zea mays HMGe gene Length = 684 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 241 gtgagcaaggctgcaggtgagaagtggagatctatgtctgatgagga 287 ||||||||||| || || ||||||||| | |||||||| |||||||| Sbjct: 206 gtgagcaaggcggctggggagaagtggcgctctatgtcggatgagga 252
>gb|AY105190.1| Zea mays PCO097256 mRNA sequence Length = 879 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 241 gtgagcaaggctgcaggtgagaagtggagatctatgtctgatgagga 287 ||||||||||| || || ||||||||| | |||||||| |||||||| Sbjct: 277 gtgagcaaggcggctggggagaagtggcgctctatgtcggatgagga 323
>ref|XM_460929.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F14135g) partial mRNA Length = 1953 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 448 gatgaggataatgaagacgacgatga 473 |||||| ||||||||||||||||||| Sbjct: 142 gatgagaataatgaagacgacgatga 167
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 448 gatgaggataatgaagacgacgatga 473 |||||| ||||||||||||||||||| Sbjct: 1131918 gatgagaataatgaagacgacgatga 1131943
>dbj|AP002832.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-651F18, complete sequence Length = 117898 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 496 aggtagcaaattgggagttggg 517 |||||||||||||||||||||| Sbjct: 29694 aggtagcaaattgggagttggg 29673
>emb|AL844845.7| Mouse DNA sequence from clone RP23-155C1 on chromosome 2, complete sequence Length = 112100 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 133 gctgccgctggcaagcccaagc 154 |||||||||||||||||||||| Sbjct: 41265 gctgccgctggcaagcccaagc 41244
>gb|AC140351.2| Mus musculus BAC clone RP24-258E8 from chromosome 8, complete sequence Length = 167073 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccgccggcggcgccagcaagagga 121 |||||||||||| |||||||||||| Sbjct: 106888 gccgccggcggctccagcaagagga 106912
>gb|BC010197.1| Mus musculus carboxypeptidase E, mRNA (cDNA clone MGC:7101 IMAGE:3157558), complete cds Length = 2130 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccgccggcggcgccagcaagagga 121 |||||||||||| |||||||||||| Sbjct: 207 gccgccggcggctccagcaagagga 231
>gb|AC166104.4| Mus musculus BAC clone RP23-320G7 from chromosome 15, complete sequence Length = 209081 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 caggactatgagaagaccaaa 345 ||||||||||||||||||||| Sbjct: 52298 caggactatgagaagaccaaa 52318
>ref|XM_976304.1| PREDICTED: Mus musculus carboxypeptidase E (Cpe), mRNA Length = 1306 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccgccggcggcgccagcaagagga 121 |||||||||||| |||||||||||| Sbjct: 276 gccgccggcggctccagcaagagga 300
>gb|AC122833.2| Mus musculus BAC clone RP23-181J12 from 15, complete sequence Length = 200339 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 caggactatgagaagaccaaa 345 ||||||||||||||||||||| Sbjct: 95325 caggactatgagaagaccaaa 95345
>ref|NM_013494.2| Mus musculus carboxypeptidase E (Cpe), mRNA Length = 2130 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccgccggcggcgccagcaagagga 121 |||||||||||| |||||||||||| Sbjct: 207 gccgccggcggctccagcaagagga 231
>emb|Z98743.1|HS181C9 Human DNA sequence from clone RP1-181C9 on chromosome 22q13.2-13.33, complete sequence Length = 92472 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 caagcccaagcgcccgccctccgcc 168 ||||||||||||||||||| ||||| Sbjct: 71023 caagcccaagcgcccgccccccgcc 70999
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 tcaaggccgccggcggcgcca 112 ||||||||||||||||||||| Sbjct: 89712 tcaaggccgccggcggcgcca 89732
>emb|X61232.1|MMCBXPEPH Mouse mRNA for carboxypeptidase H Length = 1992 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccgccggcggcgccagcaagagga 121 |||||||||||| |||||||||||| Sbjct: 155 gccgccggcggctccagcaagagga 179
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 agactcaggatgatgaggagg 409 ||||||||||||||||||||| Sbjct: 2969629 agactcaggatgatgaggagg 2969609
>dbj|AK160097.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420048N13 product:carboxypeptidase E, full insert sequence Length = 2101 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccgccggcggcgccagcaagagga 121 |||||||||||| |||||||||||| Sbjct: 222 gccgccggcggctccagcaagagga 246
>dbj|AK047891.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130020F14 product:carboxypeptidase E, full insert sequence Length = 2078 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccgccggcggcgccagcaagagga 121 |||||||||||| |||||||||||| Sbjct: 198 gccgccggcggctccagcaagagga 222
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gaggaagaaggccgccgctgc 137 ||||||||||||||||||||| Sbjct: 23173937 gaggaagaaggccgccgctgc 23173917
>gb|AF312033.1|AF312033 Mus musculus acetylcholinesterase (Ache) and D5Ertd655e genes, complete cds; ASR2 (Asr2) gene, complete cds, alternatively spliced; TRIP6 (Trip6), CIP1 (Cip1), EPHB4 (Ephb4), ZAN (Zan), EPO (Epo), RPP20 (Rpp20), PERQ1 (Perq1), GNB2 (Gnb2), and BAF53B (Baf53b) genes, complete cds; and TFR2 (Tfr2) gene, partial cds Length = 296820 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ctgcaggtgagaagtggagat 271 ||||||||||||||||||||| Sbjct: 32856 ctgcaggtgagaagtggagat 32836
>emb|AL592214.14| Mouse DNA sequence from clone RP23-212I24 on chromosome 1, complete sequence Length = 194720 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 378 caagaaggccaagactcaggatgat 402 ||||||| ||||||||||||||||| Sbjct: 187140 caagaagaccaagactcaggatgat 187116
>gb|AC005104.1| Homo sapiens BAC clone CTA-442F18 from 2, complete sequence Length = 134911 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 aagaagggcgagggcaggctcaagg 97 ||||||| ||||||||||||||||| Sbjct: 67754 aagaaggccgagggcaggctcaagg 67730
>gb|AC152168.2| Mus musculus BAC clone RP23-96H18 from chromosome 8, complete sequence Length = 219434 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccgccggcggcgccagcaagagga 121 |||||||||||| |||||||||||| Sbjct: 85062 gccgccggcggctccagcaagagga 85086
>dbj|AK209525.1| Mus musculus cDNA, clone:Y2G0115G07, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000048967, based on BLAT search Length = 185 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccgccggcggcgccagcaagagga 121 |||||||||||| |||||||||||| Sbjct: 63 gccgccggcggctccagcaagagga 87
>emb|AJ337604.1|HSA337604 Homo sapiens genomic sequence surrounding NotI site, clone NL6-LA18C Length = 685 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgcc 168 ||||||||||||||||||| ||||| Sbjct: 121 caagcccaagcgcccgccccccgcc 145
>emb|AJ337239.1|HSA337239 Homo sapiens genomic sequence surrounding NotI site, clone NR1-RL11R Length = 757 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgcc 168 ||||||||||||||||||| ||||| Sbjct: 121 caagcccaagcgcccgccccccgcc 145
>emb|AJ337191.1|HSA337191 Homo sapiens genomic sequence surrounding NotI site, clone NR1-DJ9R Length = 730 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgcc 168 ||||||||||||||||||| ||||| Sbjct: 121 caagcccaagcgcccgccccccgcc 145
>emb|AJ337085.1|HSA337085 Homo sapiens genomic sequence surrounding NotI site, clone NR1-BN3R Length = 720 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgcc 168 ||||||||||||||||||| ||||| Sbjct: 121 caagcccaagcgcccgccccccgcc 145
>gb|U23184.1|MMU23184 Mus musculus musculus carboxypeptidase E (Cpe) mRNA, complete cds Length = 1547 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 97 gccgccggcggcgccagcaagagga 121 |||||||||||| |||||||||||| Sbjct: 116 gccgccggcggctccagcaagagga 140
>gb|AF095748.1|AF095748 Burkholderia cepacia principal sigma factor (sigA), phthalate dioxygenase reductase (ophA1), putative phthalate permease N-terminal region, putative phathalate permease C-terminal region (ophD), 4,5-dihydroxyphthalate decarboxylase (ophC), phthalate-inducible quinolinate phosphoribosyl transferase (ophE), transposase (tnp), phthalate dihydrodiol dehydrogenase (ophB), and phthalate dioxygenase (ophA2) genes, complete cds; and unknown gene Length = 13610 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 81 cgagggcaggctcaaggccgccggc 105 ||||| ||||||||||||||||||| Sbjct: 10502 cgaggccaggctcaaggccgccggc 10478
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gaggaagaaggccgccgctgc 137 ||||||||||||||||||||| Sbjct: 23102128 gaggaagaaggccgccgctgc 23102108
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gaggaagaaggccgccgctgc 137 ||||||||||||||||||||| Sbjct: 4460 gaggaagaaggccgccgctgc 4480
>gb|AC150682.2| Mus musculus BAC clone RP24-210N1 from 5, complete sequence Length = 164951 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 ctgcaggtgagaagtggagat 271 ||||||||||||||||||||| Sbjct: 41509 ctgcaggtgagaagtggagat 41489
>emb|AJ343462.1|HSA343462 Homo sapiens genomic sequence surrounding NotI site, clone NR1-CG4R Length = 741 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgcc 168 ||||||||||||||||||| ||||| Sbjct: 121 caagcccaagcgcccgccccccgcc 145
>ref|XM_637534.1| Dictyostelium discoideum hypothetical protein (DDB0169229), partial mRNA Length = 2085 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaaccccaacaacaagaat 231 |||||||||||||||||||| Sbjct: 264 agaaccccaacaacaagaat 283
>ref|XM_468609.1| Oryza sativa (japonica cultivar-group), mRNA Length = 694 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 434 tcaaggccgccggcggcgcc 453
>ref|XM_479144.1| Oryza sativa (japonica cultivar-group), mRNA Length = 441 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 404 tcaaggccgccggcggcgcc 423
>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence Length = 171563 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tagctccgtaccctcggcgg 40 |||||||||||||||||||| Sbjct: 21103 tagctccgtaccctcggcgg 21122
>gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete sequence Length = 199043 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tagctccgtaccctcggcgg 40 |||||||||||||||||||| Sbjct: 173936 tagctccgtaccctcggcgg 173955
>ref|XM_365427.1| Magnaporthe grisea 70-15 hypothetical protein (MG02129.4) partial mRNA Length = 2598 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 gatgaggataatgaagacgacgat 471 ||||||||| |||||||||||||| Sbjct: 1270 gatgaggatgatgaagacgacgat 1293
>ref|XM_677334.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9157.2), mRNA Length = 1887 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 aagaaggccgccgctgccgc 140 |||||||||||||||||||| Sbjct: 106 aagaaggccgccgctgccgc 125
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 16599903 tcaaggccgccggcggcgcc 16599922
>gb|AC159708.13| Mus musculus 10 BAC RP23-110M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 238622 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 caaggctgcaggtgagaagt 265 |||||||||||||||||||| Sbjct: 65965 caaggctgcaggtgagaagt 65984
>gb|AY282923.1| Strongylocentrotus purpuratus polycystic kidney disease protein 2 (PKD2) mRNA, complete cds Length = 3539 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 447 cgatgaggataatgaagacgacgatgag 474 |||||||||| |||| |||||||||||| Sbjct: 2468 cgatgaggatgatgatgacgacgatgag 2495
>gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4, complete sequence Length = 183648 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaaccccaacaacaagaat 231 |||||||||||||||||||| Sbjct: 94212 agaaccccaacaacaagaat 94231
>ref|XR_003508.1| PREDICTED: Mus musculus similar to Alpha-enolase (2-phospho-D-glycerate hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1) (LOC637620), mRNA Length = 1184 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 caaggctgcaggtgagaagt 265 |||||||||||||||||||| Sbjct: 1097 caaggctgcaggtgagaagt 1116
>ref|XR_001977.1| PREDICTED: Mus musculus similar to Alpha-enolase (2-phospho-D-glycerate hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1) (LOC637620), mRNA Length = 1184 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 caaggctgcaggtgagaagt 265 |||||||||||||||||||| Sbjct: 1097 caaggctgcaggtgagaagt 1116
>gb|AC121353.2| Rattus norvegicus chromosome 1 clone RP32-274I11 map q34, complete sequence Length = 142440 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 caaggctgcaggtgagaagt 265 |||||||||||||||||||| Sbjct: 544 caaggctgcaggtgagaagt 525
>gb|AC130969.4| Rattus norvegicus 2 BAC CH230-105B13 (Children's Hospital Oakland Research Institute) complete sequence Length = 238254 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ttcgtcttcatgtctgactt 191 |||||||||||||||||||| Sbjct: 195595 ttcgtcttcatgtctgactt 195576
>ref|XM_751756.1| Ustilago maydis 521 hypothetical protein (UM00702.1) partial mRNA Length = 5868 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 446 gcgatgaggataatgaagacgacgatga 473 ||||||| ||| |||||||||||||||| Sbjct: 1517 gcgatgatgatgatgaagacgacgatga 1544
>gb|AC115117.5| Mus musculus BAC clone RP23-76J12 from chromosome 18, complete sequence Length = 197626 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 628 ctcatggtttgagaagttgc 647 |||||||||||||||||||| Sbjct: 122502 ctcatggtttgagaagttgc 122483
>emb|AJ890015.1| Triticum aestivum partial mRNA for putative high mobility group protein (hmg1 gene), cultivar Wyuna, from endosperm tissue Length = 638 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 agctccaagaaggccaagac 392 |||||||||||||||||||| Sbjct: 277 agctccaagaaggccaagac 296
>gb|AC161825.13| Mus musculus 10 BAC RP23-35O24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199841 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 caaggctgcaggtgagaagt 265 |||||||||||||||||||| Sbjct: 72976 caaggctgcaggtgagaagt 72957
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 ctcaaggccgccggcggcgccagc 114 ||||||||||||||||||| |||| Sbjct: 3406121 ctcaaggccgccggcggcgtcagc 3406098
>gb|U70480.1|LEU70480 Lycopersicon esculentum abscission polygalacturonase (TAPG2) mRNA complete cds Length = 1277 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaaccccaacaacaagaat 231 |||||||||||||||||||| Sbjct: 459 agaaccccaacaacaagaat 478
>ref|XM_785429.1| PREDICTED: Strongylocentrotus purpuratus similar to CG2839-PA (LOC585610), mRNA Length = 3282 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 gatgaggataatgaagacga 467 |||||||||||||||||||| Sbjct: 808 gatgaggataatgaagacga 827
>emb|Z50799.1|HVHHMG12 H.vulgare mRNA for HMG1/2-like protein Length = 974 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgccttcttcgtcttcatg 183 |||||||||| | ||||| ||||||||||||||||||| Sbjct: 208 caagcccaagagggcgcccagcgccttcttcgtcttcatg 247
>ref|XM_781060.1| PREDICTED: Strongylocentrotus purpuratus similar to neuralized, possibly N-myristoylated (XR998) (LOC581036), mRNA Length = 897 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 ataatgaagacgacgatgag 474 |||||||||||||||||||| Sbjct: 673 ataatgaagacgacgatgag 654
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 aacaacaagaatgtcgccaa 239 |||||||||||||||||||| Sbjct: 62407 aacaacaagaatgtcgccaa 62426
>emb|BX571662.1| Wolinella succinogenes, complete genome; segment 6/7 Length = 349859 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 ctccaccatgaagggcaagg 61 |||||||||||||||||||| Sbjct: 128957 ctccaccatgaagggcaagg 128976
>gb|AY082396.1| Zea mays knotted1-interacting protein (kip) mRNA, complete cds Length = 1401 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 caagactcaggatgatgaggaggc 410 |||||||||||| ||||||||||| Sbjct: 1216 caagactcaggaggatgaggaggc 1193
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 aagaaggccgccgctgccgc 140 |||||||||||||||||||| Sbjct: 517806 aagaaggccgccgctgccgc 517825
>ref|NM_142456.1| Drosophila melanogaster CG15803-RA (CG15803), mRNA Length = 2694 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tagctccgtaccctcggcgg 40 |||||||||||||||||||| Sbjct: 534 tagctccgtaccctcggcgg 515
>ref|NM_135461.2| Drosophila melanogaster CG4364-RA (CG4364), mRNA Length = 2123 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gataatgaagacgacgatga 473 |||||||||||||||||||| Sbjct: 1657 gataatgaagacgacgatga 1676
>gb|AY069545.1| Drosophila melanogaster LD27336 full length cDNA Length = 2141 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gataatgaagacgacgatga 473 |||||||||||||||||||| Sbjct: 1657 gataatgaagacgacgatga 1676
>gb|AC182755.1| Gasterosteus aculeatus clone VMRC28-49K03, complete sequence Length = 136793 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 agtttgctatcctgctatct 554 |||||||||||||||||||| Sbjct: 118664 agtttgctatcctgctatct 118683
>gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete sequence Length = 133843 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 54140 tcaaggccgccggcggcgcc 54121
>gb|AC018608.9|AC018608 Homo sapiens chromosome 8, clone RP11-403P13, complete sequence Length = 200863 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 atgaggataatgaagacgacgatg 472 |||||||||||||||| ||||||| Sbjct: 85946 atgaggataatgaagatgacgatg 85923
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 25183412 tcaaggccgccggcggcgcc 25183393
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 16593536 tcaaggccgccggcggcgcc 16593555
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 448 gatgaggataatgaagacgacgatgagt 475 ||||||||| |||| ||||||||||||| Sbjct: 26739440 gatgaggatgatgacgacgacgatgagt 26739413
>gb|AC007291.24|AC007291 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR02I05, complete sequence Length = 176075 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 gataatgaagacgacgatga 473 |||||||||||||||||||| Sbjct: 110878 gataatgaagacgacgatga 110897
>gb|AC106742.3| Homo sapiens chromosome 16 clone RP11-1136G4, complete sequence Length = 145009 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 gacttcaggcagcagtacaa 206 |||||||||||||||||||| Sbjct: 29065 gacttcaggcagcagtacaa 29084
>ref|NM_214662.1| Strongylocentrotus purpuratus polycystic kidney disease protein 2 (pkd2), mRNA Length = 3539 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 447 cgatgaggataatgaagacgacgatgag 474 |||||||||| |||| |||||||||||| Sbjct: 2468 cgatgaggatgatgatgacgacgatgag 2495
>gb|AE004606.1| Pseudomonas aeruginosa PAO1, section 167 of 529 of the complete genome Length = 10851 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 caaggccgacgcctccaaga 76 |||||||||||||||||||| Sbjct: 9494 caaggccgacgcctccaaga 9513
>ref|XM_214456.3| PREDICTED: Rattus norvegicus similar to Alpha enolase (2-phospho-D-glycerate hydro-lyase) (Non-neural enolase) (NNE) (Enolase 1) (LOC291065), mRNA Length = 938 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 caaggctgcaggtgagaagt 265 |||||||||||||||||||| Sbjct: 624 caaggctgcaggtgagaagt 643
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 448 gatgaggataatgaagacgacgatgagt 475 ||||||||| |||| ||||||||||||| Sbjct: 86532 gatgaggatgatgacgacgacgatgagt 86505
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aaggccgccgctgccgctgg 143 |||||||||||||||||||| Sbjct: 6500763 aaggccgccgctgccgctgg 6500782
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 45365 tcaaggccgccggcggcgcc 45384
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 83 tcaaggccgccggcggcgcc 64
>dbj|AK121069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061G23, full insert sequence Length = 727 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 453 tcaaggccgccggcggcgcc 472
>dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_H02 Length = 124043 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tcaaggccgccggcggcgcc 111 |||||||||||||||||||| Sbjct: 103899 tcaaggccgccggcggcgcc 103880
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete sequence Length = 224889 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tagctccgtaccctcggcgg 40 |||||||||||||||||||| Sbjct: 194430 tagctccgtaccctcggcgg 194449
>gb|AE003626.4| Drosophila melanogaster chromosome 2L, section 35 of 83 of the complete sequence Length = 264919 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 gataatgaagacgacgatga 473 |||||||||||||||||||| Sbjct: 525 gataatgaagacgacgatga 506
>gb|AC167686.2| Daphnia pulex clone JGIAZSN-5K3, complete sequence Length = 36132 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 tccaaatctgaggtcgaaga 437 |||||||||||||||||||| Sbjct: 12642 tccaaatctgaggtcgaaga 12661
>gb|AF001001.1|AF001001 Lycopersicon esculentum polygalacturonase 2 (TAPG2) gene, complete cds Length = 7991 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agaaccccaacaacaagaat 231 |||||||||||||||||||| Sbjct: 2663 agaaccccaacaacaagaat 2682
>emb|BX004791.6| Mouse DNA sequence from clone RP24-233L10 on chromosome 4, complete sequence Length = 123244 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 655 tgtattagcagagagagagc 674 |||||||||||||||||||| Sbjct: 78082 tgtattagcagagagagagc 78063
>emb|Z99967.1|MAZ99967 Musa acuminata mRNA for putative high mobility group protein (clone pBAN EU134) Length = 784 Score = 40.1 bits (20), Expect = 9.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 144 caagcccaagcgcccgccctccgccttcttcgtcttcatg 183 |||||||||| | || ||| ||||||||||||||||||| Sbjct: 174 caagcccaagaggcctcccagcgccttcttcgtcttcatg 213 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,627,183 Number of Sequences: 3902068 Number of extensions: 7627183 Number of successful extensions: 174368 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 173115 Number of HSP's gapped (non-prelim): 1247 length of query: 675 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 652 effective length of database: 17,143,297,704 effective search space: 11177430103008 effective search space used: 11177430103008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)