ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal34p09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479686.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
2ref|XM_507085.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
4dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
5dbj|AK099227.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
6dbj|AK069415.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
7emb|AL627326.16| Mouse DNA sequence from clone RP23-20A22 on chr... 44 0.54
8gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone mth2-7... 42 2.1
9gb|AC166902.2| Mus musculus BAC clone RP24-425L9 from chromosome... 42 2.1
10gb|BC028212.1| Homo sapiens phosphoinositide-3-kinase, regulator... 42 2.1
11gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosom... 42 2.1
12gb|AC127241.3| Mus musculus BAC clone RP24-403D23 from chromosom... 42 2.1
13emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, ... 42 2.1
14emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BA... 42 2.1
15gb|AC107302.4| Homo sapiens 3 BAC RP11-564P9 (Roswell Park Cance... 42 2.1
16gb|AC002091.2| Homo sapiens chromosome 17, clone CTB-41I6, compl... 42 2.1
17gb|AC099049.2| Homo sapiens chromosome 3 clone RP11-291P10, comp... 42 2.1
18emb|AL109787.1|ATT10C21 Arabidopsis thaliana DNA chromosome 4, B... 42 2.1
19gb|AC003695.1|AC003695 Homo sapiens chromosome 17, clone hRPC.85... 42 2.1
20gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
21gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 40 8.5
22gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 40 8.5
23gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, com... 40 8.5
24gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome 40 8.5
25gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome 40 8.5
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.5
27gb|AC093819.4| Homo sapiens BAC clone RP11-368D18 from 4, comple... 40 8.5
28gb|AC111141.7| Mus musculus chromosome 3, clone RP23-369G12, com... 40 8.5
29gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 8.5
30emb|AL159986.22| Human DNA sequence from clone RP11-648N19 on ch... 40 8.5
31emb|BX927212.11| Zebrafish DNA sequence from clone CH211-262A5 i... 40 8.5
32gb|AF398630.1| Tefflus sp. KAO-2001 wingless (wg) gene, partial cds 40 8.5
33emb|CR383677.15| Zebrafish DNA sequence from clone CH211-157P16 ... 40 8.5
34dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 8.5
35gb|AC154701.2| Mus musculus BAC clone RP24-344N20 from chromosom... 40 8.5
36gb|AC154691.3| Mus musculus BAC clone RP24-336F24 from chromosom... 40 8.5
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
38gb|AC023762.8| Homo sapiens chromosome 8, clone RP11-401N18, com... 40 8.5
39gb|AC154818.2| Mus musculus BAC clone RP23-73C20 from chromosome... 40 8.5
40gb|AC096683.2| Gallus gallus clone WAG-68G2, complete sequence 40 8.5
41emb|CR385044.5| Zebrafish DNA sequence from clone CH211-51N14 in... 40 8.5
42gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome 40 8.5
43gb|BC111474.1| Xenopus laevis cDNA clone MGC:131042 IMAGE:798075... 40 8.5
44dbj|AP003148.1| Mus musculus genomic DNA, chromosome 16q clone:R... 40 8.5
45gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 8.5
46dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 8.5
47emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chr... 40 8.5
48gb|AC008601.7| Homo sapiens chromosome 5 clone CTB-105L4, comple... 40 8.5 
>ref|XM_479686.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2076

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 2    cgataccaaactttgcgtatctcacaaagtcttactccaatgtgtttg 49
            ||||||| ||||| || || ||||||||||||||||||||||| ||||
Sbjct: 1646 cgatacccaacttcgcctacctcacaaagtcttactccaatgtctttg 1693
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>ref|XM_507085.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.9 mRNA
          Length = 2152

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 2    cgataccaaactttgcgtatctcacaaagtcttactccaatgtgtttg 49
            ||||||| ||||| || || ||||||||||||||||||||||| ||||
Sbjct: 1663 cgatacccaacttcgcctacctcacaaagtcttactccaatgtctttg 1710
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                              
Query: 2      cgataccaaactttgcgtatctcacaaagtcttactccaatgtgtttg 49
              ||||||| ||||| || || ||||||||||||||||||||||| ||||
Sbjct: 273339 cgatacccaacttcgcctacctcacaaagtcttactccaatgtctttg 273292
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>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1300_E01
          Length = 103022

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 2     cgataccaaactttgcgtatctcacaaagtcttactccaatgtgtttg 49
             ||||||| ||||| || || ||||||||||||||||||||||| ||||
Sbjct: 39765 cgatacccaacttcgcctacctcacaaagtcttactccaatgtctttg 39718
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>dbj|AK099227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I23, full
            insert sequence
          Length = 2076

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 2    cgataccaaactttgcgtatctcacaaagtcttactccaatgtgtttg 49
            ||||||| ||||| || || ||||||||||||||||||||||| ||||
Sbjct: 1646 cgatacccaacttcgcctacctcacaaagtcttactccaatgtctttg 1693
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>dbj|AK069415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E02, full
            insert sequence
          Length = 2152

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 2    cgataccaaactttgcgtatctcacaaagtcttactccaatgtgtttg 49
            ||||||| ||||| || || ||||||||||||||||||||||| ||||
Sbjct: 1663 cgatacccaacttcgcctacctcacaaagtcttactccaatgtctttg 1710
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>emb|AL627326.16| Mouse DNA sequence from clone RP23-20A22 on chromosome 13 Contains
            the Plfr gene for proliferin related protein, the gene
            for novel protein 1600017N11Rik similar to prolactin, the
            Prlpm gene for prolactin-like protein M and the gene for
            a novel protein similar to proliferin, complete sequence
          Length = 184504

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 467  ctgtatttgaattttaagttgtcact 492
            |||||||||||| |||||||||||||
Sbjct: 9121 ctgtatttgaatgttaagttgtcact 9096
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>gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone mth2-71n23, complete
             sequence
          Length = 125195

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 585   cttcaattttgcttttgttct 605
             |||||||||||||||||||||
Sbjct: 86317 cttcaattttgcttttgttct 86337
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>gb|AC166902.2| Mus musculus BAC clone RP24-425L9 from chromosome 9, complete sequence
          Length = 184017

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 457    tatgtttttgctgtatttgaa 477
              |||||||||||||||||||||
Sbjct: 168259 tatgtttttgctgtatttgaa 168239
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>gb|BC028212.1| Homo sapiens phosphoinositide-3-kinase, regulatory subunit 5, p101,
            mRNA (cDNA clone MGC:39947 IMAGE:5215094), complete cds
          Length = 4359

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 452  ttcaatatgtttttgctgtat 472
            |||||||||||||||||||||
Sbjct: 4199 ttcaatatgtttttgctgtat 4219
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>gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosome 9, complete
            sequence
          Length = 217074

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 457  tatgtttttgctgtatttgaa 477
            |||||||||||||||||||||
Sbjct: 1483 tatgtttttgctgtatttgaa 1463
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>gb|AC127241.3| Mus musculus BAC clone RP24-403D23 from chromosome 16, complete
             sequence
          Length = 146434

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 182   tgacatgtaccaaattgaaac 202
             |||||||||||||||||||||
Sbjct: 81664 tgacatgtaccaaattgaaac 81684
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>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73
          Length = 194862

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 386    acagccaacagcccaacacca 406
              |||||||||||||||||||||
Sbjct: 175185 acagccaacagcccaacacca 175165
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>emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I18 (ESSA project)
          Length = 122322

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 386   acagccaacagcccaacacca 406
             |||||||||||||||||||||
Sbjct: 92648 acagccaacagcccaacacca 92668
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>gb|AC107302.4| Homo sapiens 3 BAC RP11-564P9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 194234

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 445   gacaagtttcaatatgttttt 465
             |||||||||||||||||||||
Sbjct: 62801 gacaagtttcaatatgttttt 62821
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>gb|AC002091.2| Homo sapiens chromosome 17, clone CTB-41I6, complete sequence
          Length = 161816

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 452   ttcaatatgtttttgctgtat 472
             |||||||||||||||||||||
Sbjct: 36676 ttcaatatgtttttgctgtat 36656
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>gb|AC099049.2| Homo sapiens chromosome 3 clone RP11-291P10, complete sequence
          Length = 180339

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 445   gacaagtttcaatatgttttt 465
             |||||||||||||||||||||
Sbjct: 28510 gacaagtttcaatatgttttt 28490
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>emb|AL109787.1|ATT10C21 Arabidopsis thaliana DNA chromosome 4, BAC clone T10C21
          Length = 77860

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 386   acagccaacagcccaacacca 406
             |||||||||||||||||||||
Sbjct: 74070 acagccaacagcccaacacca 74050
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>gb|AC003695.1|AC003695 Homo sapiens chromosome 17, clone hRPC.859_O_20, complete sequence
          Length = 115199

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   ttcaatatgtttttgctgtat 472
             |||||||||||||||||||||
Sbjct: 40098 ttcaatatgtttttgctgtat 40118
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>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003A09, complete sequence
          Length = 167222

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   aacagccaacagcccaacac 404
             ||||||||||||||||||||
Sbjct: 19651 aacagccaacagcccaacac 19632
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 64      agttccagctgctcatcttc 83
               ||||||||||||||||||||
Sbjct: 3304678 agttccagctgctcatcttc 3304697
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 64      agttccagctgctcatcttc 83
               ||||||||||||||||||||
Sbjct: 3304848 agttccagctgctcatcttc 3304867
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>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence
          Length = 214060

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 270    tgcacaaccatgtcccaaaacaaa 293
              |||| |||||||||||||||||||
Sbjct: 148927 tgcaaaaccatgtcccaaaacaaa 148904
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>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 456    atatgtttttgctgtatttg 475
              ||||||||||||||||||||
Sbjct: 768922 atatgtttttgctgtatttg 768941
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>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 456    atatgtttttgctgtatttg 475
              ||||||||||||||||||||
Sbjct: 749329 atatgtttttgctgtatttg 749348
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 385     aacagccaacagcccaacac 404
               ||||||||||||||||||||
Sbjct: 1980890 aacagccaacagcccaacac 1980871
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>gb|AC093819.4| Homo sapiens BAC clone RP11-368D18 from 4, complete sequence
          Length = 168474

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 462    ttttgctgtatttgaatttt 481
              ||||||||||||||||||||
Sbjct: 138728 ttttgctgtatttgaatttt 138709
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>gb|AC111141.7| Mus musculus chromosome 3, clone RP23-369G12, complete sequence
          Length = 241179

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   gtatttgaattttaagttgt 488
             ||||||||||||||||||||
Sbjct: 29645 gtatttgaattttaagttgt 29664
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 591     ttttgcttttgttctgaaag 610
               ||||||||||||||||||||
Sbjct: 1642110 ttttgcttttgttctgaaag 1642129
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>emb|AL159986.22| Human DNA sequence from clone RP11-648N19 on chromosome 6, complete
            sequence
          Length = 137436

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 462  ttttgctgtatttgaattttaagt 485
            ||||||||||||| ||||||||||
Sbjct: 5305 ttttgctgtatttaaattttaagt 5282
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>emb|BX927212.11| Zebrafish DNA sequence from clone CH211-262A5 in linkage group 5,
            complete sequence
          Length = 157791

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 462  ttttgctgtatttgaatttt 481
            ||||||||||||||||||||
Sbjct: 6779 ttttgctgtatttgaatttt 6760
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>gb|AF398630.1| Tefflus sp. KAO-2001 wingless (wg) gene, partial cds
          Length = 502

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 426 gactaaatcttttgaacctg 445
           ||||||||||||||||||||
Sbjct: 306 gactaaatcttttgaacctg 287
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>emb|CR383677.15| Zebrafish DNA sequence from clone CH211-157P16 in linkage group 12,
             complete sequence
          Length = 164387

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 560   attgtactgtaaaatacagt 579
             ||||||||||||||||||||
Sbjct: 84644 attgtactgtaaaatacagt 84625
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 591     ttttgcttttgttctgaaag 610
               ||||||||||||||||||||
Sbjct: 2786155 ttttgcttttgttctgaaag 2786136
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>gb|AC154701.2| Mus musculus BAC clone RP24-344N20 from chromosome 14, complete
             sequence
          Length = 169056

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   actgtaaaatacagtagcca 584
             ||||||||||||||||||||
Sbjct: 38421 actgtaaaatacagtagcca 38440
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>gb|AC154691.3| Mus musculus BAC clone RP24-336F24 from chromosome 16, complete
            sequence
          Length = 178904

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 590  attttgcttttgttctgaaa 609
            ||||||||||||||||||||
Sbjct: 8716 attttgcttttgttctgaaa 8735
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 385     aacagccaacagcccaacac 404
               ||||||||||||||||||||
Sbjct: 1980902 aacagccaacagcccaacac 1980883
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>gb|AC023762.8| Homo sapiens chromosome 8, clone RP11-401N18, complete sequence
          Length = 120800

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 468   tgtatttgaattttaagttgtcac 491
             ||||||||||| ||||||||||||
Sbjct: 77218 tgtatttgaatattaagttgtcac 77241
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>gb|AC154818.2| Mus musculus BAC clone RP23-73C20 from chromosome 16, complete
            sequence
          Length = 183223

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 590  attttgcttttgttctgaaa 609
            ||||||||||||||||||||
Sbjct: 9684 attttgcttttgttctgaaa 9665
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>gb|AC096683.2| Gallus gallus clone WAG-68G2, complete sequence
          Length = 110417

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   caacaccatcaaaattaaca 418
             ||||||||||||||||||||
Sbjct: 76676 caacaccatcaaaattaaca 76695
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>emb|CR385044.5| Zebrafish DNA sequence from clone CH211-51N14 in linkage group 20,
             complete sequence
          Length = 59170

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   attgtactgtaaaatacagt 579
             ||||||||||||||||||||
Sbjct: 43380 attgtactgtaaaatacagt 43399
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>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 456    atatgtttttgctgtatttg 475
              ||||||||||||||||||||
Sbjct: 747250 atatgtttttgctgtatttg 747269
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>gb|BC111474.1| Xenopus laevis cDNA clone MGC:131042 IMAGE:7980752, complete cds
          Length = 2749

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 caccatcaaaattaacagag 421
           ||||||||||||||||||||
Sbjct: 494 caccatcaaaattaacagag 475
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>dbj|AP003148.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-190J24, complete
             sequences
          Length = 172173

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 590   attttgcttttgttctgaaa 609
             ||||||||||||||||||||
Sbjct: 63820 attttgcttttgttctgaaa 63801
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 274     caaccatgtcccaaaacaaa 293
               ||||||||||||||||||||
Sbjct: 2272067 caaccatgtcccaaaacaaa 2272086
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     caaccatgtcccaaaacaaa 293
               ||||||||||||||||||||
Sbjct: 1815110 caaccatgtcccaaaacaaa 1815091
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>emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chromosome 11, complete
             sequence
          Length = 224034

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   ttttgctgtatttgaatttt 481
             ||||||||||||||||||||
Sbjct: 77548 ttttgctgtatttgaatttt 77529
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>gb|AC008601.7| Homo sapiens chromosome 5 clone CTB-105L4, complete sequence
          Length = 106641

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   tgtatttgaattttaagttg 487
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Sbjct: 40311 tgtatttgaattttaagttg 40292


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,271,402
Number of Sequences: 3902068
Number of extensions: 6271402
Number of successful extensions: 125276
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124950
Number of HSP's gapped (non-prelim): 326
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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