>PDXK_ARATH (Q8W1X2) Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)|
           (Pyridoxal kinase-like protein SOS4) (Salt overly
           sensitive 4)
          Length = 309

 Score =  182 bits (462), Expect = 3e-46
 Identities = 88/101 (87%), Positives = 94/101 (93%)
 Frame = +1

Query: 151 MARPPILSVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGY 330
           M  PP+LS+ALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLG+DVDPINSVQFSNHTGY
Sbjct: 1   MTTPPVLSLALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGY 60

Query: 331 PKFRGQVLNGNQLWDLIEGLEENELLHYTHLLTGYIGSVSF 453
           P F+GQVLNG QL DLIEGLE N+LL YTH+LTGYIGSVSF
Sbjct: 61  PTFKGQVLNGQQLCDLIEGLEANDLLFYTHVLTGYIGSVSF 101

>PDXK_SHEEP (P82197) Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)|
          Length = 312

 Score =  112 bits (279), Expect = 6e-25
 Identities = 52/85 (61%), Positives = 68/85 (80%)
 Frame = +1

Query: 199 RVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDL 378
           RVLSIQSH V+GYVGN++A FPLQ+LGF+VD +NSVQFSNHTGY  ++GQVLN ++L +L
Sbjct: 6   RVLSIQSHVVRGYVGNRAATFPLQVLGFEVDAVNSVQFSNHTGYSHWKGQVLNSDELQEL 65

Query: 379 IEGLEENELLHYTHLLTGYIGSVSF 453
            +GL+ N +  Y ++LTGY    SF
Sbjct: 66  YDGLKLNHVNQYDYVLTGYTRDKSF 90

>PDXK_HUMAN (O00764) Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)|
          Length = 312

 Score =  112 bits (279), Expect = 6e-25
 Identities = 51/85 (60%), Positives = 67/85 (78%)
 Frame = +1

Query: 199 RVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDL 378
           RVLSIQSH ++GYVGN++A FPLQ+LGF++D +NSVQFSNHTGY  ++GQVLN ++L +L
Sbjct: 6   RVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQEL 65

Query: 379 IEGLEENELLHYTHLLTGYIGSVSF 453
            EGL  N +  Y ++LTGY    SF
Sbjct: 66  YEGLRLNNMNKYDYVLTGYTRDKSF 90

>PDXK_MOUSE (Q8K183) Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)|
          Length = 312

 Score =  111 bits (278), Expect = 8e-25
 Identities = 52/85 (61%), Positives = 68/85 (80%)
 Frame = +1

Query: 199 RVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDL 378
           RVLSIQSH V+GYVGN++A+FPLQ+LGF+VD +NSVQFSNHTGY  ++GQVL   +L +L
Sbjct: 6   RVLSIQSHVVRGYVGNRAAMFPLQVLGFEVDAVNSVQFSNHTGYAHWKGQVLKSQELHEL 65

Query: 379 IEGLEENELLHYTHLLTGYIGSVSF 453
            EGL+ N++  Y ++LTGY    SF
Sbjct: 66  YEGLKVNDVNKYDYVLTGYTRDKSF 90

>PDXK_PIG (O46560) Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)|
          Length = 322

 Score =  111 bits (278), Expect = 8e-25
 Identities = 53/85 (62%), Positives = 67/85 (78%)
 Frame = +1

Query: 199 RVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDL 378
           RVLSIQSH V+GYVGN++A FPLQ+LGF+VD +NSVQFSNHTGY  ++GQVLN ++L  L
Sbjct: 16  RVLSIQSHVVRGYVGNRAATFPLQVLGFEVDAVNSVQFSNHTGYAHWKGQVLNSDELHAL 75

Query: 379 IEGLEENELLHYTHLLTGYIGSVSF 453
            EGL+ N +  Y ++LTGY    SF
Sbjct: 76  YEGLKLNNVNQYDYVLTGYTRDKSF 100

>PDXK_RAT (O35331) Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)|
          Length = 312

 Score =  109 bits (273), Expect = 3e-24
 Identities = 52/85 (61%), Positives = 66/85 (77%)
 Frame = +1

Query: 199 RVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDL 378
           RVLSIQSH V+GYVGN++A+FPLQ+LGF+VD +NSVQFSNHTGY  ++GQVL   +L  L
Sbjct: 6   RVLSIQSHVVRGYVGNRAAMFPLQVLGFEVDAVNSVQFSNHTGYAHWKGQVLTSQELHAL 65

Query: 379 IEGLEENELLHYTHLLTGYIGSVSF 453
            EGL+ N +  Y ++LTGY    SF
Sbjct: 66  YEGLKANNVNKYDYVLTGYTRDKSF 90

>PDXK_CAEEL (O01824) Putative pyridoxal kinase (EC 2.7.1.35) (Pyridoxine|
           kinase)
          Length = 321

 Score =  102 bits (253), Expect = 6e-22
 Identities = 54/95 (56%), Positives = 64/95 (67%), Gaps = 10/95 (10%)
 Frame = +1

Query: 199 RVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTG----------YPKFRGQ 348
           RVLSIQSH V GY GNK +VFPLQL GF+VD INSVQFSNH G          Y   +GQ
Sbjct: 17  RVLSIQSHVVHGYAGNKCSVFPLQLHGFEVDFINSVQFSNHAGNIEYLTLPTRYEHVKGQ 76

Query: 349 VLNGNQLWDLIEGLEENELLHYTHLLTGYIGSVSF 453
            L   +L +L EGL  N + +YTH+LTGY G+V+F
Sbjct: 77  KLTEKELEELYEGLTLNNINNYTHVLTGYCGNVTF 111

>PDXY_HAEIN (P44690) Pyridoxamine kinase (EC 2.7.1.35) (PM kinase)|
          Length = 288

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +1

Query: 202 VLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDLI 381
           VLSIQSH V G+ GNKSA FP+QLLG DV  +N+VQFSNHT Y K+ G V+   Q+ +++
Sbjct: 4   VLSIQSHVVYGFAGNKSATFPMQLLGVDVWALNTVQFSNHTQYGKWTGMVIPQEQIREIV 63

Query: 382 EGLEENELLHYTH-LLTGYIGS 444
            GL+  E L     LL+GY+GS
Sbjct: 64  TGLDNIEKLQECDALLSGYLGS 85

>BUD17_YEAST (P53727) Bud site selection protein BUD17|
          Length = 317

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
 Frame = +1

Query: 193 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLW 372
           T +VLSIQSH + GYVGNK+A FPLQ  G+DVD +N+VQFSNH+GY  F G   +  +L 
Sbjct: 8   TKKVLSIQSHVIHGYVGNKAATFPLQYRGWDVDVLNTVQFSNHSGYAHFTGFKCSTEELV 67

Query: 373 DLIE-GLEENELLHYTHLLTGYIGSV 447
           D++E GL  +  + Y  +L+GY+ +V
Sbjct: 68  DIVEKGLIGSLRIKYDAVLSGYLPNV 93

>BUD16_YEAST (P39988) Bud site selection protein BUD16|
          Length = 312

 Score = 85.9 bits (211), Expect = 4e-17
 Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
 Frame = +1

Query: 199 RVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGY--PKFRGQVLNGNQLW 372
           R+L+ QSH V GYVGNK+A FPLQ LG+DVD  NSVQFSNHTGY   K  G +     L 
Sbjct: 3   RLLATQSHVVHGYVGNKAATFPLQCLGWDVDCCNSVQFSNHTGYGLDKVFGTITRETDLK 62

Query: 373 DLIEGLEENELLHYTHLLTGYI 438
           +L+ GL +N    Y  LL+GY+
Sbjct: 63  ELLSGLFDNFSQDYQALLSGYL 84

>PDXY_ECOLI (P77150) Pyridoxamine kinase (EC 2.7.1.35) (PM kinase)|
          Length = 287

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 37/82 (45%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +1

Query: 202 VLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDLI 381
           +L+IQSH V G+ GN +A FP++ LG +V P+N+VQFSNHT Y K+ G V+  + L +++
Sbjct: 5   ILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIV 64

Query: 382 EGLEENELLHYTH-LLTGYIGS 444
           +G+   + LH    +L+GY+GS
Sbjct: 65  QGIAAIDKLHTCDAVLSGYLGS 86

>PDXY_PROMI (Q51892) Pyridoxamine kinase (EC 2.7.1.35) (PM kinase)|
          Length = 289

 Score = 71.6 bits (174), Expect = 9e-13
 Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
 Frame = +1

Query: 202 VLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYP-KFRGQVLNGNQLWDL 378
           +LSIQSH V G+ GN  A FP + +G +V P+N+VQFSNHT YP K+ G V+    + ++
Sbjct: 4   ILSIQSHVVFGHAGNSXAEFPXRRMGVNVWPLNTVQFSNHTQYPEKWTGCVMXAEHITEI 63

Query: 379 IEGLEE-NELLHYTHLLTGYIGS 444
           ++G+    +L     +L+GY+GS
Sbjct: 64  VDGIAAIGKLAQCDAVLSGYLGS 86

>PDXK_SALTY (P40192) Pyridoxine kinase (EC 2.7.1.35) (Pyridoxal kinase)|
           (Vitamin B6 kinase) (Pyridoxamine kinase) (PN/PL/PM
           kinase)
          Length = 288

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
 Frame = +1

Query: 202 VLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDLI 381
           ++++QS  V G VGN  AV  ++  G  V  + +V FSN   Y  F G ++        +
Sbjct: 23  IVAVQSQVVYGSVGNSIAVPAIKAQGLRVTAVPTVLFSNTPHYKTFYGGIIPAEWFAGYL 82

Query: 382 EGLEENELL-HYTHLLTGYIGS 444
             L E + L     + TGY+GS
Sbjct: 83  TALNERDALRELKAITTGYMGS 104

>PDXK_ECOLI (P40191) Pyridoxine kinase (EC 2.7.1.35) (Pyridoxal kinase)|
           (Vitamin B6 kinase) (Pyridoxamine kinase) (PN/PL/PM
           kinase)
          Length = 283

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
 Frame = +1

Query: 172 SVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQV 351
           S AL +D   ++++QS  V G VGN  AV  ++  G +V  + +V  SN   Y  F G  
Sbjct: 11  SRALQAD---IVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGA 67

Query: 352 LNGNQLWDLIEGLEENELLHYTH-LLTGYIGSVS 450
           +        +  L+E + L     + TGY+G+ S
Sbjct: 68  IPDEWFSGYLRALQERDALRQLRAVTTGYMGTAS 101

>PDXK_SALTI (Q8Z4W1) Pyridoxine kinase (EC 2.7.1.35) (Pyridoxal kinase)|
           (Vitamin B6 kinase) (Pyridoxamine kinase) (PN/PL/PM
           kinase)
          Length = 288

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = +1

Query: 202 VLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDLI 381
           ++++QS  V G VGN  AV  ++  G  V  + +V FSN   Y  F G ++        +
Sbjct: 23  IVAVQSQVVYGSVGNSIAVPAIKAQGLRVTAVPTVLFSNTPHYKTFYGGIIPAEWFAGYL 82

Query: 382 EGLEENELL-HYTHLLTGYIGS 444
             L E + L     + TG +GS
Sbjct: 83  TALNERDALRELKAITTGNMGS 104

>RPOC2_PSEAK (Q3ZJ90) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP)|
            (Plastid-encoded RNA polymerase beta'' subunit) (RNA
            polymerase beta'' subunit)
          Length = 3462

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -3

Query: 393  LQSFNKIPQLI-AIENLTSKFWVSCMIRKLYRVYRIHIKTKELQRKDSRFVANIALDGV 220
            +Q   KI QL  A EN   +  ++ +++  + VY+     KE  RK   F+ +  +DG+
Sbjct: 3261 VQGIPKIEQLFEARENFQDELGINNLLKNKFLVYKTLYHPKEAVRKSFEFIQHYIIDGI 3319

>MK_HUMAN (P21741) Midkine precursor (MK) (Neurite outgrowth-promoting|
           protein) (Midgestation and kidney protein)
           (Amphiregulin-associated protein) (ARAP) (Neurite
           outgrowth-promoting factor 2)
          Length = 143

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = +1

Query: 52  CASWGRWIPSTPFSSREGPGWRRGTSGGAVHPAMARPP 165
           CA W  W P TP S   G G+R GT G        R P
Sbjct: 37  CAEWA-WGPCTPSSKDCGVGFREGTCGAQTQRIRCRVP 73

>YE63_SCHPO (O14249) Hypothetical protein C6G10.03c in chromosome I|
          Length = 428

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = +1

Query: 73  IPSTPFSSREGPGWRRGTSGGAVHPAMARPPILSVALPSDTGRVLSIQSHT 225
           IP  PF+S +        +  AVH  M  PP+ +V     T  VL  Q  T
Sbjct: 208 IPENPFASNDDAEVYNSVASSAVHAVMDEPPLSNV-----TNEVLQTQEET 253

>E1BL_ADE05 (P03243) E1B protein, large T-antigen|
          Length = 496

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 191 SDGSATERIGGRAIAGCTAPPLVPRRQPGPS 99
           +DG A    GG   A   A P+ P  +PGPS
Sbjct: 43  TDGGAAAAAGGSQAAAAGAEPMEPESRPGPS 73

>PQQB_METCA (Q608P3) Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone|
           biosynthesis protein B)
          Length = 304

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
 Frame = +1

Query: 226 VQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHT------GYPKFRGQVLNGNQLWDLIEG 387
           ++ Y G +    PL   GF +  I  ++FS H+       Y   R     G+ +  ++E 
Sbjct: 129 LEHYCGVEQHTVPLDGSGFTIPGIEGLKFSTHSLKSKAPPYSPHRHDPHEGDNIGVIVEN 188

Query: 388 LEENELLHY 414
           LE    L+Y
Sbjct: 189 LENGRKLYY 197

>CS024_HUMAN (Q9BVV8) Protein C19orf24|
          Length = 132

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +1

Query: 73  IPSTPFSSREGPGWRRGTSGGAVHPAMARPPILSVALPSD 192
           +PS P   R  P W RG S    HP   R  +L  A P+D
Sbjct: 12  VPSNPLLHRSFPCWPRGWS----HPVPTRELLLEPAQPAD 47

>FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger protein multitype|
           1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1)
          Length = 1004

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -1

Query: 158 RAIAGCTAPPLVPRRQPGPSLEEKGVDGIHRPHE 57
           RA  G  A P  PR  PGP   E+G  G   P +
Sbjct: 621 RAPPGQPAEPDAPRSSPGPGAREEGAGGAATPED 654

>XYLT1_PANTR (Q5QQ57) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)|
           (Peptide O-xylosyltransferase 1)
          Length = 945

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 188 DGSATERIGGRAIAGCTAPPLVPRRQ 111
           D  A ER GG A+ G   PP  PRR+
Sbjct: 39  DSGAGERRGGAAVGGGEQPPPAPRRE 64

>BLIP_STRCL (P35804) Beta-lactamase inhibitory protein precursor (BLIP)|
          Length = 201

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 265 LQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDLI 381
           L L  FDVD  +S  F   + +  F   VL G + WDL+
Sbjct: 163 LSLSCFDVDGYSSTGFYRGSAHLWFTDGVLQGKRQWDLV 201

>PUS5_CANAL (Q5A0Y2) Pseudouridylate synthase PUS5 (EC 5.4.99.-) (Pseudouridine|
           synthase 5) (Uracil hydrolyase PUS5)
          Length = 247

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +1

Query: 106 PGWRRGTSGGAVHPAMARPPILSVALPSDTGRVLSIQSHTVQGY 237
           P  RR   G  V P   + PIL + L  +TGR   I+ H +Q +
Sbjct: 143 PSARRTIKG--VFPVFQQGPILPIILELETGRKNQIRDHIIQKF 184

>MK_MOUSE (P12025) Midkine precursor (MK) (Retinoic acid-induced|
           differentiation factor)
          Length = 140

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 52  CASWGRWIPSTPFSSREGPGWRRGTSGGAVHPAMARPP 165
           C+ W  W P TP S   G G+R GT G        + P
Sbjct: 34  CSEW-TWGPCTPSSKDCGMGFREGTCGAQTQRVHCKVP 70

>MK_RAT (Q9R1S9) Midkine precursor (MK)|
          Length = 140

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 52  CASWGRWIPSTPFSSREGPGWRRGTSGGAVHPAMARPP 165
           C+ W  W P TP S   G G+R GT G        + P
Sbjct: 34  CSEW-TWGPCTPSSKDCGMGFREGTCGAQTQRIHCKVP 70

>YKU7_YEAST (P36039) UPF0347 protein YKL207w|
          Length = 282

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +2

Query: 212 SSPTPSRAMLAT---NLLSFRCNSLVLMWIR*TLYSFLIIQDTQNLEVRFSMAISCGILL 382
           + P+ S AM+     N+ SF   ++++ W+      F+++Q    L  +F   +  GI+ 
Sbjct: 136 NDPSMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIIC 195

Query: 383 KD 388
           +D
Sbjct: 196 QD 197


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,832,400
Number of Sequences: 219361
Number of extensions: 1248631
Number of successful extensions: 3990
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3988
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)