ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal35d19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066997.1| Oryza sativa (japonica cultivar-group) cDNA clon... 555 e-155
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 172 8e-40
3dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic D... 172 8e-40
4emb|AJ538488.1|NTA538488 Nicotiana tabacum cDNA-AFLP-fragment BC... 52 0.002
5gb|M14444.1|TOMCBPB Tomato chlorophyll a/b-binding protein gene ... 48 0.031
6ref|XM_814507.1| Trypanosoma cruzi strain CL Brener kinesin (Tc0... 44 0.49
7emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMW... 44 0.49
8emb|X58515.1|PSLHAA2 P.silvestris mRNA for type I chlorophyll a/... 44 0.49
9emb|X58514.1|PSLHAA1 P.silvestris mRNA for type I chlorophyll a/... 44 0.49
10ref|NM_102037.3| Arabidopsis thaliana unknown protein AT1G21890 ... 42 1.9
11ref|NM_106307.2| Arabidopsis thaliana chlorophyll binding AT1G76... 42 1.9
12gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genom... 42 1.9
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.9
14ref|XM_746554.1| Aspergillus fumigatus Af293 cell cycle control ... 42 1.9
15gb|AY133841.1| Arabidopsis thaliana clone U18725 putative noduli... 42 1.9
16gb|AY065236.1| Arabidopsis thaliana putative nodulin protein (At... 42 1.9
17gb|AC149492.14| Medicago truncatula clone mth2-99d10, complete s... 42 1.9
18gb|AC093414.3| Homo sapiens chromosome 3 clone RP11-193I22, comp... 42 1.9
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
20emb|BX813792.1|CNS0ACBM Arabidopsis thaliana Full-length cDNA Co... 42 1.9
21gb|AC013482.2|AC013482 Genomic sequence for Arabidopsis thaliana... 42 1.9
22gb|AC163714.3| Gallus gallus BAC clone TAM31-13E5 from chromosom... 42 1.9
23gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding prot... 42 1.9
24gb|AC087556.30| Mus musculus strain C57BL/6J chromosome 16 clone... 42 1.9
25dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone... 42 1.9
26gb|DQ252493.1| Solanum tuberosum clone 062G02 chlorophyll a-b bi... 42 1.9
27gb|AC026185.4| Homo sapiens chromosome 3 clone RP11-299H13 map 3... 42 1.9
28dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRN... 42 1.9
29gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, co... 40 7.7
30gb|AC185523.2| Pan troglodytes chromosome X clone PTB-124O20 map... 40 7.7
31ref|XM_709536.1| Candida albicans SC5314 hypothetical protein (C... 40 7.7
32ref|XM_709440.1| Candida albicans SC5314 hypothetical protein (C... 40 7.7
33gb|DQ226800.1| Boechera divaricarpa isolate SLW-B-D01 mRNA sequence 40 7.7
34gb|AC044864.6| Mus musculus chromosome 3, clone RP23-168E14, com... 40 7.7
35gb|AC102547.8| Mus musculus chromosome 7, clone RP23-134L4, comp... 40 7.7
36gb|AC163434.5| Mus musculus chromosome 7, clone RP23-320N24, com... 40 7.7
37ref|XM_745788.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.7
38gb|AC116051.4| Mus musculus BAC clone RP23-4L11 from 3, complete... 40 7.7
39gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 7.7
40ref|XM_504987.1| Yarrowia lipolytica CLIB122, YALI0F04312g predi... 40 7.7
41emb|AJ298904.1|NLA298904 Nocardia lactamdurans ask gene for aspa... 40 7.7
42gb|AY112728.1| Streptomyces clavuligerus aspartokinase and aspar... 40 7.7
43gb|AC131961.1| Drosophila pseudoobscura FOSMID DPSF1-548A3 (Chi... 40 7.7
44gb|AC142143.29| Medicago truncatula clone mth2-25c22, complete s... 40 7.7
45gb|AC073683.3| Mus musculus chromosome 17 clone RP23-124G7, comp... 40 7.7
46gb|AF119448.1|AF119448 Linanthus parviflorus internal transcribe... 40 7.7
47gb|AC160566.2| Pan troglodytes BAC clone CH251-353L1 from chromo... 40 7.7
48emb|BX088729.7| Mouse DNA sequence from clone RP24-69K11 on chro... 40 7.7
49dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
50gb|AC158224.6| Mus musculus chromosome 7, clone RP23-103H3, comp... 40 7.7
51gb|AC074008.5| Homo sapiens BAC clone RP11-582H21 from 2, comple... 40 7.7
52gb|AC136489.3| Homo sapiens chromosome X clone RP13-749I18 map X... 40 7.7
53gb|AC136488.3| Homo sapiens chromosome X clone RP13-886N14, comp... 40 7.7
54dbj|AP004372.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.7
55dbj|AP001782.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.7
56dbj|AP000783.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 7.7
57gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
58emb|AL731890.2|CNS08C8U Oryza sativa chromosome 12, . BAC OJ1563... 40 7.7
59emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 7.7
60dbj|D45418.1|HUMRAB11BA Human Rab11B mRNA 40 7.7
61emb|AL691437.7| Mouse DNA sequence from clone RP23-248J10 on chr... 40 7.7 
>dbj|AK066997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091K09, full
           insert sequence
          Length = 1202

 Score =  555 bits (280), Expect = e-155
 Identities = 475/540 (87%)
 Strand = Plus / Plus

                                                                       
Query: 26  cggccgcggtggctcggtcctctccggtacgactacccggagcacctggccggagagttc 85
           |||||||||||||| || ||  | | |||||| ||||||| ||| ||  ||||||||| |
Sbjct: 318 cggccgcggtggctaggccccgtgccgtacgagtacccggcgcatctcaccggagagtac 377

                                                                       
Query: 86  ccgggcgattacgggttcgatatagcaggcctgggccgggaccccgttgctttcgccaac 145
           || |||||||||||||||||||| |||||||||||| |||| |||||||||||||| |||
Sbjct: 378 cctggcgattacgggttcgatattgcaggcctgggcagggatcccgttgctttcgcaaac 437

                                                                       
Query: 146 tactttaactttgagatcttacattgtcgatgggccatgcttgctgctcttggtgttgtt 205
           ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 438 tacttcaactttgagatcttgcattgtcggtgggccatgcttgctgctcttggtgttgtt 497

                                                                       
Query: 206 gttcctgagttgttagatctatttgggatagtgcattttgttgagcctgtctggtggaaa 265
           ||||||||  |||||||||| |||||  |||| |||||||| |||||||| |||||||||
Sbjct: 498 gttcctgaactgttagatctttttggagtagtccattttgtcgagcctgtttggtggaaa 557

                                                                       
Query: 266 gttggttatgccaaacttcagggtgatactcttgattaccttgggattcctgggttccga 325
           |||||||| || |||||||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 558 gttggttacgcaaaacttcagggtgacactcttgattaccttggaattcctggtttccga 617

                                                                       
Query: 326 attgctggtggtcaaggcatcatcgtcatcgctatctgccaagtccttttgatggttggg 385
           || ||||||||||| ||  |||| |||||||||||||| |||| ||||||||||||||| 
Sbjct: 618 atcgctggtggtcagggtgtcattgtcatcgctatctgtcaagcccttttgatggttggt 677

                                                                       
Query: 386 ccagaatatgcgagatactgtgggatcgaggcgctagaacccttgggaatatatcttcct 445
           ||||||||||| || ||||| ||||| ||||| ||||||||||||||| |||||||||| 
Sbjct: 678 ccagaatatgcaaggtactgcgggattgaggctctagaacccttgggattatatcttccg 737

                                                                       
Query: 446 ggggacataaactacccaggtggagcactgttcgatccattggggctgtccaaagaccct 505
           || |||||||||||||| || |||||||| |||||||| |||||||| |||||||| || 
Sbjct: 738 ggagacataaactacccgggaggagcactcttcgatcccttggggctctccaaagatcca 797

                                                                       
Query: 506 gttgcgttcgaagaattcaaggtgaaggagataaaaaatggtcgtctagcaatggttgca 565
           || |||||||||||  | |||||||||||||| || || ||||| || ||||||||||||
Sbjct: 798 gtcgcgttcgaagatctaaaggtgaaggagatcaagaacggtcgcctggcaatggttgca 857
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  172 bits (87), Expect = 8e-40
 Identities = 162/187 (86%)
 Strand = Plus / Plus

                                                                           
Query: 379     ggttgggccagaatatgcgagatactgtgggatcgaggcgctagaacccttgggaatata 438
               |||||| ||||||||||| || ||||| ||||| ||||| ||||||||||||||| ||||
Sbjct: 7133420 ggttggtccagaatatgcaaggtactgcgggattgaggctctagaacccttgggattata 7133479

                                                                           
Query: 439     tcttcctggggacataaactacccaggtggagcactgttcgatccattggggctgtccaa 498
               |||||| || |||||||||||||| || |||||||| |||||||| |||||||| |||||
Sbjct: 7133480 tcttccgggagacataaactacccgggaggagcactcttcgatcccttggggctctccaa 7133539

                                                                           
Query: 499     agaccctgttgcgttcgaagaattcaaggtgaaggagataaaaaatggtcgtctagcaat 558
               ||| || || |||||||||||  | |||||||||||||| || || ||||| || |||||
Sbjct: 7133540 agatccagtcgcgttcgaagatctaaaggtgaaggagatcaagaacggtcgcctggcaat 7133599

                      
Query: 559     ggttgca 565
               |||||||
Sbjct: 7133600 ggttgca 7133606



 Score =  170 bits (86), Expect = 3e-39
 Identities = 122/134 (91%)
 Strand = Plus / Plus

                                                                           
Query: 154     ctttgagatcttacattgtcgatgggccatgcttgctgctcttggtgttgttgttcctga 213
               |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 7132579 ctttgagatcttgcattgtcggtgggccatgcttgctgctcttggtgttgttgttcctga 7132638

                                                                           
Query: 214     gttgttagatctatttgggatagtgcattttgttgagcctgtctggtggaaagttggtta 273
                 |||||||||| |||||  |||| |||||||| |||||||| |||||||||||||||||
Sbjct: 7132639 actgttagatctttttggagtagtccattttgtcgagcctgtttggtggaaagttggtta 7132698

                             
Query: 274     tgccaaacttcagg 287
                || ||||||||||
Sbjct: 7132699 cgcaaaacttcagg 7132712



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                           
Query: 284     cagggtgatactcttgattaccttgggattcctgggttccgaattgctggtggtcaaggc 343
               |||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| || 
Sbjct: 7133112 cagggtgacactcttgattaccttggaattcctggtttccgaatcgctggtggtcagggt 7133171

                                                     
Query: 344     atcatcgtcatcgctatctgccaagtccttttgatggt 381
                |||| |||||||||||||| |||| ||||||||||||
Sbjct: 7133172 gtcattgtcatcgctatctgtcaagcccttttgatggt 7133209



 Score =  113 bits (57), Expect = 6e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                           
Query: 26      cggccgcggtggctcggtcctctccggtacgactacccggagcacctggccggagagttc 85
               |||||||||||||| || ||  | | |||||| ||||||| ||| ||  ||||||||| |
Sbjct: 7131433 cggccgcggtggctaggccccgtgccgtacgagtacccggcgcatctcaccggagagtac 7131492

                                                                           
Query: 86      ccgggcgattacgggttcgatatagcaggcctgggccgggaccccgttgctttcgccaac 145
               || |||||||||||||||||||| |||||||||||| |||| |||||||||||||| |||
Sbjct: 7131493 cctggcgattacgggttcgatattgcaggcctgggcagggatcccgttgctttcgcaaac 7131552

                    
Query: 146     tactt 150
               |||||
Sbjct: 7131553 tactt 7131557
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>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0592C05
          Length = 150478

 Score =  172 bits (87), Expect = 8e-40
 Identities = 162/187 (86%)
 Strand = Plus / Plus

                                                                         
Query: 379   ggttgggccagaatatgcgagatactgtgggatcgaggcgctagaacccttgggaatata 438
             |||||| ||||||||||| || ||||| ||||| ||||| ||||||||||||||| ||||
Sbjct: 85499 ggttggtccagaatatgcaaggtactgcgggattgaggctctagaacccttgggattata 85558

                                                                         
Query: 439   tcttcctggggacataaactacccaggtggagcactgttcgatccattggggctgtccaa 498
             |||||| || |||||||||||||| || |||||||| |||||||| |||||||| |||||
Sbjct: 85559 tcttccgggagacataaactacccgggaggagcactcttcgatcccttggggctctccaa 85618

                                                                         
Query: 499   agaccctgttgcgttcgaagaattcaaggtgaaggagataaaaaatggtcgtctagcaat 558
             ||| || || |||||||||||  | |||||||||||||| || || ||||| || |||||
Sbjct: 85619 agatccagtcgcgttcgaagatctaaaggtgaaggagatcaagaacggtcgcctggcaat 85678

                    
Query: 559   ggttgca 565
             |||||||
Sbjct: 85679 ggttgca 85685



 Score =  170 bits (86), Expect = 3e-39
 Identities = 122/134 (91%)
 Strand = Plus / Plus

                                                                         
Query: 154   ctttgagatcttacattgtcgatgggccatgcttgctgctcttggtgttgttgttcctga 213
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 84658 ctttgagatcttgcattgtcggtgggccatgcttgctgctcttggtgttgttgttcctga 84717

                                                                         
Query: 214   gttgttagatctatttgggatagtgcattttgttgagcctgtctggtggaaagttggtta 273
               |||||||||| |||||  |||| |||||||| |||||||| |||||||||||||||||
Sbjct: 84718 actgttagatctttttggagtagtccattttgtcgagcctgtttggtggaaagttggtta 84777

                           
Query: 274   tgccaaacttcagg 287
              || ||||||||||
Sbjct: 84778 cgcaaaacttcagg 84791



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                         
Query: 284   cagggtgatactcttgattaccttgggattcctgggttccgaattgctggtggtcaaggc 343
             |||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| || 
Sbjct: 85191 cagggtgacactcttgattaccttggaattcctggtttccgaatcgctggtggtcagggt 85250

                                                   
Query: 344   atcatcgtcatcgctatctgccaagtccttttgatggt 381
              |||| |||||||||||||| |||| ||||||||||||
Sbjct: 85251 gtcattgtcatcgctatctgtcaagcccttttgatggt 85288



 Score =  113 bits (57), Expect = 6e-22
 Identities = 108/125 (86%)
 Strand = Plus / Plus

                                                                         
Query: 26    cggccgcggtggctcggtcctctccggtacgactacccggagcacctggccggagagttc 85
             |||||||||||||| || ||  | | |||||| ||||||| ||| ||  ||||||||| |
Sbjct: 83512 cggccgcggtggctaggccccgtgccgtacgagtacccggcgcatctcaccggagagtac 83571

                                                                         
Query: 86    ccgggcgattacgggttcgatatagcaggcctgggccgggaccccgttgctttcgccaac 145
             || |||||||||||||||||||| |||||||||||| |||| |||||||||||||| |||
Sbjct: 83572 cctggcgattacgggttcgatattgcaggcctgggcagggatcccgttgctttcgcaaac 83631

                  
Query: 146   tactt 150
             |||||
Sbjct: 83632 tactt 83636
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>emb|AJ538488.1|NTA538488 Nicotiana tabacum cDNA-AFLP-fragment BC2-M23-037
          Length = 135

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 522 tcaaggtgaaggagataaaaaatggt 547
           ||||||||||||||||||||||||||
Sbjct: 10  tcaaggtgaaggagataaaaaatggt 35
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>gb|M14444.1|TOMCBPB Tomato chlorophyll a/b-binding protein gene Cab-3C, complete cds
          Length = 1135

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 167 cattgtcgatgggccatgcttgctgctcttgg 198
           |||||| ||||||||||||||| |||||||||
Sbjct: 509 cattgtagatgggccatgcttggtgctcttgg 540
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>ref|XM_814507.1| Trypanosoma cruzi strain CL Brener kinesin (Tc00.1047053510303.80)
            partial mRNA
          Length = 1818

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 187  tgctgctcttggtgttgttgtt 208
            ||||||||||||||||||||||
Sbjct: 1322 tgctgctcttggtgttgttgtt 1301
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>emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMWG0701.rev
          Length = 326

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 522 tcaaggtgaaggagataaaaaatggtcgtctagcaatg 559
           |||||||||||||||| || || |||||||| ||||||
Sbjct: 118 tcaaggtgaaggagatcaagaacggtcgtcttgcaatg 81
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>emb|X58515.1|PSLHAA2 P.silvestris mRNA for type I chlorophyll a/b binding protein of LHC
           I
          Length = 926

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 511 gttcgaagaattcaaggtgaaggagataaaaaatggtcgtct 552
           |||| |||||| ||| || || ||||||||||||||||||||
Sbjct: 435 gttcaaagaatacaaagtaaaagagataaaaaatggtcgtct 476
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>emb|X58514.1|PSLHAA1 P.silvestris mRNA for type I chlorophyll a/b binding protein of LHC
           I
          Length = 961

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 511 gttcgaagaattcaaggtgaaggagataaaaaatggtcgtct 552
           |||| |||||| ||| || || ||||||||||||||||||||
Sbjct: 637 gttcaaagaatacaaagtaaaagagataaaaaatggtcgtct 678
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>ref|NM_102037.3| Arabidopsis thaliana unknown protein AT1G21890 mRNA, complete cds
          Length = 1475

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 187  tgctgctcttggtgttgttgt 207
            |||||||||||||||||||||
Sbjct: 981  tgctgctcttggtgttgttgt 1001
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>ref|NM_106307.2| Arabidopsis thaliana chlorophyll binding AT1G76570 mRNA, complete
           cds
          Length = 1055

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 362 tgccaagtccttttgatggttgggccagaatatgcgagatactgtgggatcgaggcgcta 421
           |||||||| || |||||||| || || ||||| || ||||||||||| || |||||  ||
Sbjct: 667 tgccaagtactcttgatggtaggaccggaatacgcaagatactgtggcattgaggcctta 726

                            
Query: 422 gaacccttgggaatata 438
           || ||  ||||||||||
Sbjct: 727 gagccactgggaatata 743
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>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete
             sequence
          Length = 139771

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 69    acctggccggagagttcccgggcgattacgggt 101
             ||||| |||||||||||||||| || |||||||
Sbjct: 79567 acctgaccggagagttcccgggagactacgggt 79535
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 69       acctggccggagagttcccgggcgattacgggt 101
                ||||| |||||||||||||||| || |||||||
Sbjct: 21808249 acctgaccggagagttcccgggagactacgggt 21808281
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>ref|XM_746554.1| Aspergillus fumigatus Af293 cell cycle control protein Cwf19
           (Afu4g11830) partial mRNA
          Length = 2142

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 335 ggtcaaggcatcatcgtcatc 355
           |||||||||||||||||||||
Sbjct: 116 ggtcaaggcatcatcgtcatc 136
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>gb|AY133841.1| Arabidopsis thaliana clone U18725 putative nodulin protein
           (At1g21890) mRNA, complete cds
          Length = 1201

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 187 tgctgctcttggtgttgttgt 207
           |||||||||||||||||||||
Sbjct: 900 tgctgctcttggtgttgttgt 920
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>gb|AY065236.1| Arabidopsis thaliana putative nodulin protein (At1g21890) mRNA,
            complete cds
          Length = 1494

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 187  tgctgctcttggtgttgttgt 207
            |||||||||||||||||||||
Sbjct: 980  tgctgctcttggtgttgttgt 1000
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>gb|AC149492.14| Medicago truncatula clone mth2-99d10, complete sequence
          Length = 124792

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 515   gaagaattcaaggtgaaggag 535
             |||||||||||||||||||||
Sbjct: 50812 gaagaattcaaggtgaaggag 50792
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>gb|AC093414.3| Homo sapiens chromosome 3 clone RP11-193I22, complete sequence
          Length = 185511

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    gatgggccatgcttgctgctc 194
              |||||||||||||||||||||
Sbjct: 107092 gatgggccatgcttgctgctc 107072
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 69       acctggccggagagttcccgggcgattacgggt 101
                ||||| |||||||||||||||| || |||||||
Sbjct: 21801278 acctgaccggagagttcccgggagactacgggt 21801310
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>emb|BX813792.1|CNS0ACBM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB3ZC06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1311

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                        
Query: 362  tgccaagtccttttgatggttgggccagaatatgcgagatactgtgggatcgaggcgcta 421
            |||||||| || |||||||| || || ||||| || ||||||||||| || |||||  ||
Sbjct: 1130 tgccaagtactcttgatggtaggaccggaatacgcaagatactgtggcattgaggcctta 1189

                             
Query: 422  gaacccttgggaatata 438
            || ||  ||||||||||
Sbjct: 1190 gagccactgggaatata 1206
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>gb|AC013482.2|AC013482 Genomic sequence for Arabidopsis thaliana BAC T26F17 from chromosome I,
             complete sequence
          Length = 82875

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 187   tgctgctcttggtgttgttgt 207
             |||||||||||||||||||||
Sbjct: 29394 tgctgctcttggtgttgttgt 29374
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>gb|AC163714.3| Gallus gallus BAC clone TAM31-13E5 from chromosome w, complete sequence
          Length = 191678

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 303    accttgggattcctgggttcc 323
              |||||||||||||||||||||
Sbjct: 155623 accttgggattcctgggttcc 155643
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>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA,
           nuclear gene encoding chloroplast protein, complete cds
          Length = 1027

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 69  acctggccggagagttcccgggcgattacgggt 101
           ||||| |||||||||||||||| || |||||||
Sbjct: 237 acctgaccggagagttcccgggagactacgggt 269
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>gb|AC087556.30| Mus musculus strain C57BL/6J chromosome 16 clone rp23-123l9, complete
             sequence
          Length = 219730

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 260   tggaaagttggttatgccaaa 280
             |||||||||||||||||||||
Sbjct: 70181 tggaaagttggttatgccaaa 70201
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>dbj|AP004940.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT48I11, TM0106,
              complete sequence
          Length = 103636

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 182    atgcttgctgctcttggtgttgttg 206
              ||||||||| |||||||||||||||
Sbjct: 101125 atgcttgctcctcttggtgttgttg 101101
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>gb|DQ252493.1| Solanum tuberosum clone 062G02 chlorophyll a-b binding protein
           3C-like mRNA, complete cds
          Length = 1055

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 174 gatgggccatgcttgctgctcttgg 198
           ||||||||||||||| |||||||||
Sbjct: 349 gatgggccatgcttggtgctcttgg 373
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>gb|AC026185.4| Homo sapiens chromosome 3 clone RP11-299H13 map 3p, complete sequence
          Length = 154923

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 521    ttcaaggtgaaggagataaaa 541
              |||||||||||||||||||||
Sbjct: 121274 ttcaaggtgaaggagataaaa 121254
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>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II
           light-harvesting chlorophyll a/b binding protein of
           photosystem II (LHCPII), complete cds
          Length = 989

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 69  acctggccggagagttcccgggcgattacgggt 101
           ||||| |||||||||||||||| || |||||||
Sbjct: 229 acctgaccggagagttcccgggagactacgggt 261
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>gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, complete sequence
          Length = 180227

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    cccttgggaatatatcttcc 444
              ||||||||||||||||||||
Sbjct: 146168 cccttgggaatatatcttcc 146187
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>gb|AC185523.2| Pan troglodytes chromosome X clone PTB-124O20 map human ortholog p11.3,
             complete sequence
          Length = 209530

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   cataaactacccaggtggag 470
             ||||||||||||||||||||
Sbjct: 19010 cataaactacccaggtggag 19029
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>ref|XM_709536.1| Candida albicans SC5314 hypothetical protein (CaO19.8939), mRNA
          Length = 1752

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 185 cttgctgctcttggtgttgttgtt 208
           ||||||||||||| ||||||||||
Sbjct: 910 cttgctgctcttgctgttgttgtt 887
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>ref|XM_709440.1| Candida albicans SC5314 hypothetical protein (CaO19.1359), mRNA
          Length = 1752

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 185 cttgctgctcttggtgttgttgtt 208
           ||||||||||||| ||||||||||
Sbjct: 910 cttgctgctcttgctgttgttgtt 887
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>gb|DQ226800.1| Boechera divaricarpa isolate SLW-B-D01 mRNA sequence
          Length = 510

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 524 aaggtgaaggagataaaaaatggtcgtctagcaatg 559
           |||||||||||| | || ||||||||||| ||||||
Sbjct: 239 aaggtgaaggagctcaagaatggtcgtcttgcaatg 274
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>gb|AC044864.6| Mus musculus chromosome 3, clone RP23-168E14, complete sequence
          Length = 224119

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 524    aaggtgaaggagataaaaaa 543
              ||||||||||||||||||||
Sbjct: 134511 aaggtgaaggagataaaaaa 134492
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>gb|AC102547.8| Mus musculus chromosome 7, clone RP23-134L4, complete sequence
          Length = 220452

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 523   caaggtgaaggagataaaaa 542
             ||||||||||||||||||||
Sbjct: 59340 caaggtgaaggagataaaaa 59321
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>gb|AC163434.5| Mus musculus chromosome 7, clone RP23-320N24, complete sequence
          Length = 224337

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 523    caaggtgaaggagataaaaa 542
              ||||||||||||||||||||
Sbjct: 211647 caaggtgaaggagataaaaa 211666
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>ref|XM_745788.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g09920)
           partial mRNA
          Length = 1854

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 aattgctggtggtcaaggca 344
           ||||||||||||||||||||
Sbjct: 390 aattgctggtggtcaaggca 409
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>gb|AC116051.4| Mus musculus BAC clone RP23-4L11 from 3, complete sequence
          Length = 224674

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 524    aaggtgaaggagataaaaaa 543
              ||||||||||||||||||||
Sbjct: 191644 aaggtgaaggagataaaaaa 191625
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 187     tgctgctcttggtgttgttgttcc 210
               ||||||| ||||||||||||||||
Sbjct: 1701363 tgctgcttttggtgttgttgttcc 1701386
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>ref|XM_504987.1| Yarrowia lipolytica CLIB122, YALI0F04312g predicted mRNA
          Length = 1365

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  gttgttcctgagttgttaga 222
            ||||||||||||||||||||
Sbjct: 1228 gttgttcctgagttgttaga 1247
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>emb|AJ298904.1|NLA298904 Nocardia lactamdurans ask gene for aspartokinase alpha and beta
           subunits and asd gene for aspartate-semialdehyde
           dehydrogenase
          Length = 2500

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  gctcggccgcggtggctcgg 42
           ||||||||||||||||||||
Sbjct: 508 gctcggccgcggtggctcgg 527
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>gb|AY112728.1| Streptomyces clavuligerus aspartokinase and aspartate-semialdehyde
           dehydrogenase operon, complete sequence
          Length = 2683

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  gctcggccgcggtggctcgg 42
           ||||||||||||||||||||
Sbjct: 693 gctcggccgcggtggctcgg 712
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>gb|AC131961.1| Drosophila pseudoobscura  FOSMID DPSF1-548A3 (Children's Hospital
             Oakland Research Institute Drosophila pseudoobscura FOSMID
             Library) complete sequence
          Length = 39990

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   ttgctgctcttggtgttgttgttc 209
             |||||||||||| |||||||||||
Sbjct: 32159 ttgctgctcttgttgttgttgttc 32182
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>gb|AC142143.29| Medicago truncatula clone mth2-25c22, complete sequence
          Length = 124110

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 515   gaagaattcaaggtgaagga 534
             ||||||||||||||||||||
Sbjct: 22849 gaagaattcaaggtgaagga 22830
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>gb|AC073683.3| Mus musculus chromosome 17 clone RP23-124G7, complete sequence
          Length = 213137

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   tgttgttgttcctgagttgt 218
             ||||||||||||||||||||
Sbjct: 89491 tgttgttgttcctgagttgt 89510
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>gb|AF119448.1|AF119448 Linanthus parviflorus internal transcribed spacer 2, complete
           sequence
          Length = 207

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 494 tccaaagaccctgttgcgtt 513
           ||||||||||||||||||||
Sbjct: 168 tccaaagaccctgttgcgtt 187
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>gb|AC160566.2| Pan troglodytes BAC clone CH251-353L1 from chromosome unknown, complete
             sequence
          Length = 188544

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   ctatttgggatagtgcattt 243
             ||||||||||||||||||||
Sbjct: 86507 ctatttgggatagtgcattt 86526
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>emb|BX088729.7| Mouse DNA sequence from clone RP24-69K11 on chromosome X, complete
             sequence
          Length = 88912

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 277   caaacttcagggtgatactcttga 300
             |||||| |||||||||||||||||
Sbjct: 32366 caaactgcagggtgatactcttga 32343
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 343      catcatcgtcatcgctatct 362
                ||||||||||||||||||||
Sbjct: 11672760 catcatcgtcatcgctatct 11672741
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>gb|AC158224.6| Mus musculus chromosome 7, clone RP23-103H3, complete sequence
          Length = 224545

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   caaggtgaaggagataaaaa 542
             ||||||||||||||||||||
Sbjct: 64641 caaggtgaaggagataaaaa 64660
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>gb|AC074008.5| Homo sapiens BAC clone RP11-582H21 from 2, complete sequence
          Length = 159439

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    tgttgttgttcctgagttgt 218
              ||||||||||||||||||||
Sbjct: 146260 tgttgttgttcctgagttgt 146279
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>gb|AC136489.3| Homo sapiens chromosome X clone RP13-749I18 map Xp11.3 complete
             sequence
          Length = 164468

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   cataaactacccaggtggag 470
             ||||||||||||||||||||
Sbjct: 64728 cataaactacccaggtggag 64747
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>gb|AC136488.3| Homo sapiens chromosome X clone RP13-886N14, complete sequence
          Length = 163835

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 451    cataaactacccaggtggag 470
              ||||||||||||||||||||
Sbjct: 163316 cataaactacccaggtggag 163335
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>dbj|AP004372.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-651K21, complete
             sequence
          Length = 197360

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   ctatttgggatagtgcattt 243
             ||||||||||||||||||||
Sbjct: 94166 ctatttgggatagtgcattt 94185
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>dbj|AP001782.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-109E10, complete
              sequence
          Length = 169313

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    tatttgggatagtgcatttt 244
              ||||||||||||||||||||
Sbjct: 167171 tatttgggatagtgcatttt 167190
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>dbj|AP000783.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-12D18, complete
             sequence
          Length = 114233

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   tatttgggatagtgcatttt 244
             ||||||||||||||||||||
Sbjct: 49931 tatttgggatagtgcatttt 49950
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 343      catcatcgtcatcgctatct 362
                ||||||||||||||||||||
Sbjct: 11672431 catcatcgtcatcgctatct 11672412
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>emb|AL731890.2|CNS08C8U Oryza sativa chromosome 12, . BAC OJ1563_B02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101314

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   catcatcgtcatcgctatct 362
             ||||||||||||||||||||
Sbjct: 83906 catcatcgtcatcgctatct 83925
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    gttgttcctgagttgttaga 222
              ||||||||||||||||||||
Sbjct: 661513 gttgttcctgagttgttaga 661494
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>dbj|D45418.1|HUMRAB11BA Human Rab11B mRNA
          Length = 767

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 15 acggcggagctcggccgcgg 34
          ||||||||||||||||||||
Sbjct: 24 acggcggagctcggccgcgg 43
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>emb|AL691437.7| Mouse DNA sequence from clone RP23-248J10 on chromosome 2, complete
             sequence
          Length = 115517

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   tcaaggtgaaggagataaaa 541
             ||||||||||||||||||||
Sbjct: 42461 tcaaggtgaaggagataaaa 42480


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,221,608
Number of Sequences: 3902068
Number of extensions: 4221608
Number of successful extensions: 83369
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83085
Number of HSP's gapped (non-prelim): 281
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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