| Clone Name | baal34o13 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ582621.1|OSA582621 Oryza sativa (japonica cultivar-group) mRNA for NADPH thioredoxin reductase (NtrC gene) Length = 1684 Score = 716 bits (361), Expect = 0.0 Identities = 520/573 (90%) Strand = Plus / Plus Query: 13 tacgccgcacgggcgaacctgaaacccgtcgtcttcgaaggttaccaagtcggcggtgtt 72 |||||||| ||||||||||| || |||||||| |||||||| ||||| || || || ||| Sbjct: 234 tacgccgctcgggcgaacctcaagcccgtcgtgttcgaaggctaccaggttggtggcgtt 293 Query: 73 cccggaggccagctgatgaccaccaccgaggtggagaatttccctgggttccccgacggc 132 || || || ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 294 cctggtgggcagctgatgaccaccaccgaggtggagaatttccctgggtttccggatggc 353 Query: 133 ataaccgggcctgatctcatggacaaaatgcggaagcaagcggagcggtggggtgcagag 192 | || |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 354 gtcactgggcctgatctcatggacaaaatgcggaagcaagcggagcggtggggtgctgag 413 Query: 193 cttcaccaagaggatgtcgagtttgtggatgtgaagagcagaccgtttgttattcgtagc 252 |||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 414 cttcaccaggaggatgttgagtttgtgaatgtgaagagcagaccgtttgttattcgtagc 473 Query: 253 agcgaccgagaggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcga 312 || || || ||||||||||| ||||||||||||||||| ||||| ||| |||| ||||| Sbjct: 474 agtgatcgtgaggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgc 533 Query: 313 cttcgattacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgt 372 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 534 cttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgt 593 Query: 373 gatggagcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagataca 432 ||||||||||| || || | ||||||||||||||||| || ||||||||||| |||||| Sbjct: 594 gatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgataca 653 Query: 433 gctaccgaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcga 492 ||||| |||||||| ||||||||||| |||||||| | || |||||||||||||||||| Sbjct: 654 gctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcga 713 Query: 493 agggaccaactacgagcatccaaagctatgcaggaccgagtactcaacaaccccaacata 552 | ||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 714 aaggatcagctacgagcatccaaagctatgcaggaccgagtactcaacaatcccaacata 773 Query: 553 acagtacatttcaatacagaagctgtggatgtt 585 ||||||||||||||||||||||||||||||||| Sbjct: 774 acagtacatttcaatacagaagctgtggatgtt 806
>dbj|AK068311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L11, full insert sequence Length = 1847 Score = 607 bits (306), Expect = e-170 Identities = 465/518 (89%) Strand = Plus / Plus Query: 13 tacgccgcacgggcgaacctgaaacccgtcgtcttcgaaggttaccaagtcggcggtgtt 72 |||||||| ||||||||||| || |||||||| |||||||| ||||| || || || ||| Sbjct: 261 tacgccgctcgggcgaacctcaagcccgtcgtgttcgaaggctaccaggttggtggcgtt 320 Query: 73 cccggaggccagctgatgaccaccaccgaggtggagaatttccctgggttccccgacggc 132 || || | ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 321 cctggtgagcagctgatgaccaccaccgaggtggagaatttccctgggtttccggatggc 380 Query: 133 ataaccgggcctgatctcatggacaaaatgcggaagcaagcggagcggtggggtgcagag 192 | || |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 381 gtcactgggcctgatctcatggacaaaatgcggaagcaagcggagcggtggggtgctgag 440 Query: 193 cttcaccaagaggatgtcgagtttgtggatgtgaagagcagaccgtttgttattcgtagc 252 |||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 441 cttcaccaggaggatgttgagtttgtgaatgtgaagagcagaccgtttgttattcgtagc 500 Query: 253 agcgaccgagaggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcga 312 || || || ||||||||||| ||||||||||||||||| ||||| ||| |||| ||||| Sbjct: 501 agtgatcgtgaggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgc 560 Query: 313 cttcgattacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgt 372 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 561 cttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgt 620 Query: 373 gatggagcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagataca 432 ||||||||||| || || | ||||||||||||||||| || ||||||||||| |||||| Sbjct: 621 gatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgataca 680 Query: 433 gctaccgaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcga 492 ||||| |||||||| ||||||||||| |||||||| | || |||||||||||||||||| Sbjct: 681 gctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcga 740 Query: 493 agggaccaactacgagcatccaaagctatgcaggaccg 530 | ||| || ||||||||||||||||||||||||||||| Sbjct: 741 aaggatcagctacgagcatccaaagctatgcaggaccg 778 Score = 103 bits (52), Expect = 6e-19 Identities = 55/56 (98%) Strand = Plus / Plus Query: 530 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgtt 585 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgtt 856
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 317 bits (160), Expect = 2e-83 Identities = 241/268 (89%) Strand = Plus / Plus Query: 263 aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 322 |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||||||| Sbjct: 27642273 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 27642332 Query: 323 ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 382 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 27642333 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 27642392 Query: 383 cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 442 | || || | ||||||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 27642393 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 27642452 Query: 443 aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 502 |||| ||||||||||| |||||||| | || ||||||||||||||||||| ||| || | Sbjct: 27642453 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 27642512 Query: 503 tacgagcatccaaagctatgcaggaccg 530 |||||||||||||||||||||||||||| Sbjct: 27642513 tacgagcatccaaagctatgcaggaccg 27642540 Score = 159 bits (80), Expect = 1e-35 Identities = 92/96 (95%) Strand = Plus / Plus Query: 159 aatgcggaagcaagcggagcggtggggtgcagagcttcaccaagaggatgtcgagtttgt 218 |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 27641738 aatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttgt 27641797 Query: 219 ggatgtgaagagcagaccgtttgttattcgtagcag 254 | |||||||||||||||||||||||||||||||||| Sbjct: 27641798 gaatgtgaagagcagaccgtttgttattcgtagcag 27641833 Score = 147 bits (74), Expect = 5e-32 Identities = 128/146 (87%) Strand = Plus / Plus Query: 13 tacgccgcacgggcgaacctgaaacccgtcgtcttcgaaggttaccaagtcggcggtgtt 72 |||||||| ||||||||||| || |||||||| |||||||| ||||| || || || ||| Sbjct: 27641501 tacgccgctcgggcgaacctcaagcccgtcgtgttcgaaggctaccaggttggtggcgtt 27641560 Query: 73 cccggaggccagctgatgaccaccaccgaggtggagaatttccctgggttccccgacggc 132 || || || ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 27641561 cctggtgggcagctgatgaccaccaccgaggtggagaatttccctgggtttccggatggc 27641620 Query: 133 ataaccgggcctgatctcatggacaa 158 | || |||||||||||||||||||| Sbjct: 27641621 gtcactgggcctgatctcatggacaa 27641646 Score = 103 bits (52), Expect = 6e-19 Identities = 55/56 (98%) Strand = Plus / Plus Query: 530 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgtt 585 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 27643200 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgtt 27643255
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 317 bits (160), Expect = 2e-83 Identities = 241/268 (89%) Strand = Plus / Plus Query: 263 aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 322 |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||||||| Sbjct: 99266 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 99325 Query: 323 ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 382 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 99326 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 99385 Query: 383 cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 442 | || || | ||||||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 99386 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 99445 Query: 443 aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 502 |||| ||||||||||| |||||||| | || ||||||||||||||||||| ||| || | Sbjct: 99446 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 99505 Query: 503 tacgagcatccaaagctatgcaggaccg 530 |||||||||||||||||||||||||||| Sbjct: 99506 tacgagcatccaaagctatgcaggaccg 99533 Score = 159 bits (80), Expect = 1e-35 Identities = 92/96 (95%) Strand = Plus / Plus Query: 159 aatgcggaagcaagcggagcggtggggtgcagagcttcaccaagaggatgtcgagtttgt 218 |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 98731 aatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttgt 98790 Query: 219 ggatgtgaagagcagaccgtttgttattcgtagcag 254 | |||||||||||||||||||||||||||||||||| Sbjct: 98791 gaatgtgaagagcagaccgtttgttattcgtagcag 98826 Score = 147 bits (74), Expect = 5e-32 Identities = 128/146 (87%) Strand = Plus / Plus Query: 13 tacgccgcacgggcgaacctgaaacccgtcgtcttcgaaggttaccaagtcggcggtgtt 72 |||||||| ||||||||||| || |||||||| |||||||| ||||| || || || ||| Sbjct: 98494 tacgccgctcgggcgaacctcaagcccgtcgtgttcgaaggctaccaggttggtggcgtt 98553 Query: 73 cccggaggccagctgatgaccaccaccgaggtggagaatttccctgggttccccgacggc 132 || || || ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 98554 cctggtgggcagctgatgaccaccaccgaggtggagaatttccctgggtttccggatggc 98613 Query: 133 ataaccgggcctgatctcatggacaa 158 | || |||||||||||||||||||| Sbjct: 98614 gtcactgggcctgatctcatggacaa 98639 Score = 103 bits (52), Expect = 6e-19 Identities = 55/56 (98%) Strand = Plus / Plus Query: 530 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgtt 585 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 100193 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgtt 100248
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 317 bits (160), Expect = 2e-83 Identities = 241/268 (89%) Strand = Plus / Plus Query: 263 aggtgaaatgtcatagtgtaatcattgcaactggagctactgcgaagcgacttcgattac 322 |||||||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||||||| Sbjct: 21375 aggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattac 21434 Query: 323 ctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatggagcat 382 |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 21435 ctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcat 21494 Query: 383 cacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctaccgagg 442 | || || | ||||||||||||||||| || ||||||||||| ||||||||||| |||| Sbjct: 21495 ccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagagg 21554 Query: 443 aagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcgaagggaccaac 502 |||| ||||||||||| |||||||| | || ||||||||||||||||||| ||| || | Sbjct: 21555 aagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagc 21614 Query: 503 tacgagcatccaaagctatgcaggaccg 530 |||||||||||||||||||||||||||| Sbjct: 21615 tacgagcatccaaagctatgcaggaccg 21642 Score = 159 bits (80), Expect = 1e-35 Identities = 92/96 (95%) Strand = Plus / Plus Query: 159 aatgcggaagcaagcggagcggtggggtgcagagcttcaccaagaggatgtcgagtttgt 218 |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 20840 aatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttgt 20899 Query: 219 ggatgtgaagagcagaccgtttgttattcgtagcag 254 | |||||||||||||||||||||||||||||||||| Sbjct: 20900 gaatgtgaagagcagaccgtttgttattcgtagcag 20935 Score = 147 bits (74), Expect = 5e-32 Identities = 128/146 (87%) Strand = Plus / Plus Query: 13 tacgccgcacgggcgaacctgaaacccgtcgtcttcgaaggttaccaagtcggcggtgtt 72 |||||||| ||||||||||| || |||||||| |||||||| ||||| || || || ||| Sbjct: 20603 tacgccgctcgggcgaacctcaagcccgtcgtgttcgaaggctaccaggttggtggcgtt 20662 Query: 73 cccggaggccagctgatgaccaccaccgaggtggagaatttccctgggttccccgacggc 132 || || || ||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 20663 cctggtgggcagctgatgaccaccaccgaggtggagaatttccctgggtttccggatggc 20722 Query: 133 ataaccgggcctgatctcatggacaa 158 | || |||||||||||||||||||| Sbjct: 20723 gtcactgggcctgatctcatggacaa 20748 Score = 103 bits (52), Expect = 6e-19 Identities = 55/56 (98%) Strand = Plus / Plus Query: 530 gagtactcaacaaccccaacataacagtacatttcaatacagaagctgtggatgtt 585 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 22302 gagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgtt 22357
>ref|NM_129731.3| Arabidopsis thaliana disulfide oxidoreductase/ electron transporter/ oxidoreductase/ thioredoxin-disulfide reductase AT2G41680 mRNA, complete cds Length = 1800 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 319 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 378 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 623 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 682 Query: 379 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 438 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 683 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 742 Query: 439 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 491 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 743 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 795
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 71 ttcccggaggccagctgatgaccaccaccgaggtggagaatttccctgggttccccgacg 130 ||||||| ||||||||||||||||||||| | ||||||||||| ||||| ||||| |||| Sbjct: 1801201 ttcccggtggccagctgatgaccaccacccatgtggagaattttcctggcttcccggacg 1801260 Query: 131 g 131 | Sbjct: 1801261 g 1801261 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 11 tctacgccgcacgggcgaacctgaaacc 38 |||||||||||||||| |||||| |||| Sbjct: 1801141 tctacgccgcacgggccaacctgcaacc 1801168
>gb|BT000516.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680/T32G6.20) mRNA, complete cds Length = 1590 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 319 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 378 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 607 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 666 Query: 379 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 438 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 667 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 726 Query: 439 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 491 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 727 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 779
>gb|AC002510.3| Arabidopsis thaliana chromosome 2 clone T32G6 map CIC11C08, complete sequence Length = 91979 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 319 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 378 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 79032 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 78973 Query: 379 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 438 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 78972 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 78913 Query: 439 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 491 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 78912 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 78860
>gb|AY062479.1| Arabidopsis thaliana putative thioredoxin reductase (At2g41680; T32G6.20) mRNA, complete cds Length = 1802 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 319 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 378 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 617 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 676 Query: 379 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 438 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 677 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 736 Query: 439 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 491 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 737 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 789
>gb|AY056394.1| Arabidopsis thaliana At2g41680/T32G6.20 mRNA, complete cds Length = 1783 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 319 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 378 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 620 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 679 Query: 379 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 438 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 680 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 739 Query: 439 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 491 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 740 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 792
>emb|BX820757.1|CNS0A9JK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1726 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 319 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 378 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 613 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 672 Query: 379 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 438 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 673 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 732 Query: 439 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 491 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 733 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 785
>emb|BX819883.1|CNS0A9GU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS42ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 319 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 378 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 250 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 309 Query: 379 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 438 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 310 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 369 Query: 439 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 491 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 370 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 422
>emb|BX820128.1|CNS0A9G2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1730 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 319 ttacctcgtgaagaagaattttggagcagaggtatcagcgcatgtgcaatatgtgatgga 378 |||||||| || |||||||| ||||| || || || || || ||||| || ||||||||| Sbjct: 624 ttacctcgagaggaagaattctggagtagggggataagtgcttgtgctatctgtgatgga 683 Query: 379 gcatcacctctgtacaagggtcaagttcttgcggtcgttggaggtggagatacagctacc 438 || || ||| | | ||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct: 684 gcttcgcctttatttaaggggcaagtacttgccgtggttggaggaggagatacggctaca 743 Query: 439 gaggaagcgatatatttgacaaaatatgcgtgccatgttcatttacttgttcg 491 |||||||| | ||| | || |||||||| | ||||||||||| |||||||| Sbjct: 744 gaggaagccttgtatctcacgaaatatgcccgtcatgttcatttgcttgttcg 796
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccgacggcataaccgggcctgatctc 150 |||||||||||||||||||| ||||| || ||||| |||||||| | ||||| || ||| Sbjct: 1185259 accaccaccgaggtggagaacttccccggtttcccggacggcatcatggggccggagctc 1185318 Query: 151 atggacaaaatgcg 164 |||||||| ||||| Sbjct: 1185319 atggacaacatgcg 1185332
>emb|X92105.1|SCTRXABGN Streptomyces coelicolor trxA and trxB gene cluster Length = 1898 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgggcc 143 |||||||| |||||||||||||||||| ||||| || |||| |||||||| | || || Sbjct: 201 gctgatgaacaccaccgaggtggagaacttccccggcttccaggacggcatcatgggccc 260 Query: 144 tgatctcatggacaaaatgcgg 165 || ||||||||||| |||||| Sbjct: 261 cgagctcatggacaacatgcgg 282
>emb|AJ007313.1|SCO007313 Streptomyces coelicolor sigT, trxB and trxA genes, and ORF1 and ORF2 Length = 4026 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgggcc 143 |||||||| |||||||||||||||||| ||||| || |||| |||||||| | || || Sbjct: 2737 gctgatgaacaccaccgaggtggagaacttccccggcttccaggacggcatcatgggccc 2796 Query: 144 tgatctcatggacaaaatgcgg 165 || ||||||||||| |||||| Sbjct: 2797 cgagctcatggacaacatgcgg 2818
>emb|X92104.1|SCTRXBGEN S.coelicolor trxB gene Length = 963 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgggcc 143 |||||||| |||||||||||||||||| ||||| || |||| |||||||| | || || Sbjct: 126 gctgatgaacaccaccgaggtggagaacttccccggcttccaggacggcatcatgggccc 185 Query: 144 tgatctcatggacaaaatgcgg 165 || ||||||||||| |||||| Sbjct: 186 cgagctcatggacaacatgcgg 207
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 84 gctgatgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgggcc 143 |||||||| |||||||||||||||||| ||||| || |||| |||||||| | || || Sbjct: 54476 gctgatgaacaccaccgaggtggagaacttccccggcttccaggacggcatcatgggccc 54417 Query: 144 tgatctcatggacaaaatgcgg 165 || ||||||||||| |||||| Sbjct: 54416 cgagctcatggacaacatgcgg 54395
>gb|AE012301.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 209 of 460 of the complete genome Length = 11381 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 79 ggccagctgatgaccaccaccgaggtgga 107 ||||||||||||||||||||||||||||| Sbjct: 6427 ggccagctgatgaccaccaccgaggtgga 6399
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 79 ggccagctgatgaccaccaccgaggtgga 107 ||||||||||||||||||||||||||||| Sbjct: 2669899 ggccagctgatgaccaccaccgaggtgga 2669927
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgggcc 143 |||||||| |||||||||||||||||| ||||| || |||| |||||||| | || || Sbjct: 5277192 gctgatgaacaccaccgaggtggagaacttccccggcttccaggacggcatcatgggccc 5277251 Query: 144 tgatctcatggacaaaatgcg 164 || ||||||||||| ||||| Sbjct: 5277252 cgagctcatggacaacatgcg 5277272
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 79 ggccagctgatgaccaccaccgaggtgga 107 ||||||||||||||||||||||||||||| Sbjct: 2541482 ggccagctgatgaccaccaccgaggtgga 2541510
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 85 ctgatgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgg 140 |||||||||||||||||||||||||| || || || || ||||| ||||| ||||| Sbjct: 2905103 ctgatgaccaccaccgaggtggagaactttccgggctttcccgagggcatcaccgg 2905158
>emb|BX248361.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 8/8 Length = 53793 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaatttccctgggttccccgacggcat 134 ||||||||||||||||||||| || || ||||| || |||||||| ||||| Sbjct: 45605 gctgatgaccaccaccgaggtagaaaacttcccaggtttccccgagggcat 45655
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 88 atgaccaccaccgaggtggagaatttccctgggttccccgacggcat 134 |||| |||||||||||||||||| || |||||||| || |||||||| Sbjct: 5420617 atgaacaccaccgaggtggagaactttcctgggtttccggacggcat 5420663
>gb|AF418548.1|AF418548 Mycobacterium avium subsp. paratuberculosis thioredoxin reductase (trxB), thioredoxin (trxA), and N-acetylmuramoyl-l-alanine amidase (cwlM) genes, complete cds; and ParA (parA) gene, partial cds Length = 4900 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 86 tgatgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgg 140 ||||||||||||||||||||||||| | ||| || |||| |||||| || ||||| Sbjct: 491 tgatgaccaccaccgaggtggagaactaccccggtttccgcgacgggatcaccgg 545
>gb|DQ231520.1| Streptomyces sp. FR-008 ArsR2 (arsR2), ArsO (arsO), ArsB (arsB), ArsR1 (arsR1), ArsC (arsC), and ArsT (arsT) genes, complete cds; and unknown genes Length = 7568 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccga 128 ||||| |||||||||||||| |||||||| |||||||| Sbjct: 5084 accacgaccgaggtggagaacttccctggcttccccga 5121
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 88 atgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgggcctgat 147 |||| |||||||||||||||||| ||||| || || || ||||| || | || || || Sbjct: 3634710 atgaacaccaccgaggtggagaacttccccggttttccggacgggatcatgggccccgag 3634769 Query: 148 ctcatggacaaaatgcggaagcaagcggagcggt 181 ||||||||||| ||||| ||||| || ||||||| Sbjct: 3634770 ctcatggacaacatgcgtaagcaggctgagcggt 3634803
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 79 ggccagctgatgaccaccaccgaggt 104 |||||||||||||||||||||||||| Sbjct: 2676555 ggccagctgatgaccaccaccgaggt 2676580
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 79 ggccagctgatgaccaccaccgaggt 104 |||||||||||||||||||||||||| Sbjct: 2697080 ggccagctgatgaccaccaccgaggt 2697105
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 86 tgatgaccaccaccgaggtggagaatttccctgggttccccgacgg 131 ||||||||||||||||||||||||| | ||| || |||| |||||| Sbjct: 4820065 tgatgaccaccaccgaggtggagaactaccccggtttccgcgacgg 4820110
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 79 ggccagctgatgaccaccaccgaggtgga 107 |||||||| |||||||||||||||||||| Sbjct: 2645637 ggccagctcatgaccaccaccgaggtgga 2645609 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 79 ggccagctgatgaccaccaccgaggtgga 107 ||||| ||||||||||||||||||||||| Sbjct: 2339508 ggccaactgatgaccaccaccgaggtgga 2339480
>emb|X87899.1|MLTRTRXHP M.leprae TR/Trx hybrid protein Length = 1800 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgg 140 |||||||||||||||||||||||| || | ||| || || | | ||||||||||||| Sbjct: 384 gctgatgaccaccaccgaggtggaaaactacccaggttttcgcaacggcataaccgg 440
>emb|AL583926.1|MLEPRTN10 Mycobacterium leprae strain TN complete genome; segment 10/10 Length = 269203 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgg 140 |||||||||||||||||||||||| || | ||| || || | | ||||||||||||| Sbjct: 259393 gctgatgaccaccaccgaggtggaaaactacccaggttttcgcaacggcataaccgg 259449
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 86 tgatgaccaccaccgaggtggagaa 110 ||||||||||||||||||||||||| Sbjct: 1373087 tgatgaccaccaccgaggtggagaa 1373063
>gb|AF023161.1|AF023161 Mycobacterium smegmatis thioredoxin reductase (trxB) and thioredoxin (trxA) genes, complete cds Length = 1775 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 86 tgatgaccaccaccgaggtggagaa 110 ||||||||||||||||||||||||| Sbjct: 384 tgatgaccaccaccgaggtggagaa 408
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 79 ggccagctgatgaccaccaccgaggtgga 107 ||||||||||||||||||||||| ||||| Sbjct: 3064348 ggccagctgatgaccaccaccgacgtgga 3064376
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 349 ggtatcagcgcatgtgcaatatgtgatgg 377 ||||| ||||||||||||||||||||||| Sbjct: 1148142 ggtattagcgcatgtgcaatatgtgatgg 1148170
>gb|L39923.1|MSGDNAB Mycobacterium leprae cosmid L222 DNA sequence, 27 CDS features Length = 40571 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaatttccctgggttccccgacggcataaccgg 140 |||||||||||||||||||||||| || | ||| || || | | ||||||||||||| Sbjct: 27036 gctgatgaccaccaccgaggtggaaaactacccaggttttcgcaacggcataaccgg 27092
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 76 ggaggccagctgatgaccaccaccgaggtggagaatt 112 ||||||||||| |||||||| ||||||||||| |||| Sbjct: 23270 ggaggccagctcatgaccacaaccgaggtggacaatt 23306
>emb|AJ421947.1|TAE421947 Triticum aestivum mRNA for NADPH-thioredoxin reductase (ntr gene) Length = 1045 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccgacggcat 134 ||||||||||| || ||||| ||||| || |||||||||||||| Sbjct: 200 accaccaccgacgtcgagaacttccccggcttccccgacggcat 243
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 91 accaccaccgaggtggagaatttccctgggttccccgacggcat 134 ||||||||||| || ||||| ||||| || |||||||||||||| Sbjct: 12695274 accaccaccgacgtcgagaacttcccgggcttccccgacggcat 12695231
>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0039F24 Length = 132107 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Minus Query: 91 accaccaccgaggtggagaatttccctgggttccccgacggcat 134 ||||||||||| || ||||| ||||| || |||||||||||||| Sbjct: 48795 accaccaccgacgtcgagaacttcccgggcttccccgacggcat 48752
>dbj|AK106368.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-C03, full insert sequence Length = 1383 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccgacggcat 134 ||||||||||| || ||||| ||||| || |||||||||||||| Sbjct: 326 accaccaccgacgtcgagaacttcccgggcttccccgacggcat 369
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaa 110 |||||||||||||||||| |||||||| Sbjct: 4394185 gctgatgaccaccaccgacgtggagaa 4394211
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 94 accaccgaggtggagaatttccctgggttccccgacggc 132 ||||||||||| ||||| ||||| || |||||||||||| Sbjct: 2575194 accaccgaggtagagaacttccccggcttccccgacggc 2575232
>emb|X95798.1|MTTRTRXGN M.tuberculosis TR and Trx genes Length = 1529 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaa 110 |||||||||||||||||| |||||||| Sbjct: 245 gctgatgaccaccaccgacgtggagaa 271
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 84 gctgatgaccaccaccgaggtggagaa 110 |||||||||||||||||| |||||||| Sbjct: 235148 gctgatgaccaccaccgacgtggagaa 235174
>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7 Length = 349652 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 11 tctacgccgcacgggcgaacctg 33 ||||||||||||||||||||||| Sbjct: 323635 tctacgccgcacgggcgaacctg 323613 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Minus Query: 79 ggccagctgatgaccaccaccgaggtggagaatttccctgggttccccga 128 |||||| |||||||||||||| | || |||||||| || || |||||||| Sbjct: 323567 ggccagttgatgaccaccacccacgttgagaattttccaggtttccccga 323518
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 73 cccggaggccagctgatgaccaccaccgaggtggagaatttccctgggttccccgacggc 132 ||||| || ||| ||||||| || ||||||||||| || || || |||||||| || ||| Sbjct: 1006777 cccggtggtcagttgatgacgacaaccgaggtggaaaactttccggggttcccagagggc 1006718 Query: 133 ataaccgggcctgatctcatgga 155 || ||||| ||||| || ||||| Sbjct: 1006717 atcaccggccctgagctgatgga 1006695
>gb|AD000008.1|MSGY367 Mycobacterium tuberculosis sequence from clone y367 Length = 35336 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 84 gctgatgaccaccaccgaggtggagaa 110 |||||||||||||||||| |||||||| Sbjct: 6104 gctgatgaccaccaccgacgtggagaa 6078
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 73 cccggaggccagctgatgaccaccaccgaggtggagaatttccctgggttccccgacggc 132 ||||| || ||| ||||||| || ||||||||||| || || || |||||||| || ||| Sbjct: 614095 cccggtggtcagttgatgacgacaaccgaggtggaaaactttccggggttcccagagggc 614154 Query: 133 ataaccgggcctgatctcatgga 155 || ||||| ||||| || ||||| Sbjct: 614155 atcaccggccctgagctgatgga 614177
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 86 tgatgaccaccaccgaggtgga 107 |||||||||||||||||||||| Sbjct: 3469409 tgatgaccaccaccgaggtgga 3469388
>ref|XM_467446.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccga 128 ||||||||||| || ||||| ||||| ||||||||||| Sbjct: 270 accaccaccgacgtcgagaacttcccggggttccccga 307
>ref|XM_506936.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B12.9 mRNA Length = 1503 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccga 128 ||||||||||| || ||||| ||||| ||||||||||| Sbjct: 287 accaccaccgacgtcgagaacttcccggggttccccga 324
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 79 ggccagctgatgaccaccaccgaggtggagaatt 112 ||||||||||||| |||||| || |||||||||| Sbjct: 248663 ggccagctgatgatcaccacggatgtggagaatt 248630
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 82 cagctgatgaccaccaccgaggtgga 107 ||||||| |||||||||||||||||| Sbjct: 1831912 cagctgacgaccaccaccgaggtgga 1831887
>dbj|AB175670.1| Ovophis okinavensis mitochondrial DNA, complete genome Length = 17388 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 534 actcaacaaccccaacataaca 555 |||||||||||||||||||||| Sbjct: 13569 actcaacaaccccaacataaca 13590
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccga 128 ||||||||||| || ||||| ||||| ||||||||||| Sbjct: 29569725 accaccaccgacgtcgagaacttcccggggttccccga 29569762
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 93 caccaccgaggtggagaatttccctgggttccccgacggcat 134 ||||| |||||||||||| ||||| || |||||||| ||||| Sbjct: 4563824 caccagcgaggtggagaacttccccggcttccccgagggcat 4563865
>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1479_B12 Length = 127089 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccga 128 ||||||||||| || ||||| ||||| ||||||||||| Sbjct: 27446 accaccaccgacgtcgagaacttcccggggttccccga 27483
>dbj|AK104317.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C03, full insert sequence Length = 1389 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccga 128 ||||||||||| || ||||| ||||| ||||||||||| Sbjct: 270 accaccaccgacgtcgagaacttcccggggttccccga 307
>dbj|AK071251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087H21, full insert sequence Length = 1502 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccga 128 ||||||||||| || ||||| ||||| ||||||||||| Sbjct: 286 accaccaccgacgtcgagaacttcccggggttccccga 323
>emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c21, COMPLETE SEQUENCE Length = 210117 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 accgaggtggagaatttccctgggttccccgacggcat 134 ||||| || ||||||||||| || |||||||||||||| Sbjct: 209590 accgacgtcgagaatttccccggcttccccgacggcat 209627
>emb|CR955012.2| Medicago truncatula chromosome 5 clone mth2-84f14, COMPLETE SEQUENCE Length = 117704 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 97 accgaggtggagaatttccctgggttccccgacggcat 134 ||||| || ||||||||||| || |||||||||||||| Sbjct: 13393 accgacgtcgagaatttccccggcttccccgacggcat 13430
>gb|AC157593.4| Mus musculus BAC clone RP23-254B18 from chromosome 16, complete sequence Length = 204167 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 gatatatttgacaaaatatgc 467 ||||||||||||||||||||| Sbjct: 52265 gatatatttgacaaaatatgc 52285
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 79 ggccagctgatgaccaccaccgaggtgga 107 ||||| || |||||||||||||||||||| Sbjct: 518899 ggccaactcatgaccaccaccgaggtgga 518927
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 88 atgaccaccaccgaggtggagaatttccc 116 ||||||||||||||||| ||||| ||||| Sbjct: 137469 atgaccaccaccgaggtcgagaacttccc 137497
>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5 Length = 341050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 gttggaggtggagatacagct 435 ||||||||||||||||||||| Sbjct: 249327 gttggaggtggagatacagct 249347
>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence Length = 271577 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 88 atgaccaccaccgaggtggagaatttccc 116 ||||||||||||||||| ||||| ||||| Sbjct: 155996 atgaccaccaccgaggtcgagaacttccc 156024
>gb|AE011835.1| Xanthomonas axonopodis pv. citri str. 306, section 213 of 469 of the complete genome Length = 11790 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 79 ggccagctgatgaccaccaccgaggtgga 107 ||||||||||||||||| ||||| ||||| Sbjct: 8906 ggccagctgatgaccacgaccgaagtgga 8878
>gb|AY943951.1| Streptomyces sp. F2 arsenic gene cluster, partial sequence Length = 7932 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 94 accaccgaggtggagaatttccctgggttccccgacggcat 134 ||||||||||| ||||| ||||| || |||||||| ||||| Sbjct: 249 accaccgaggtcgagaacttccccggcttccccgagggcat 209
>emb|BX470073.8| Zebrafish DNA sequence from clone DKEY-239D21 in linkage group 20, complete sequence Length = 146568 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 540 caaccccaacataacagtaca 560 ||||||||||||||||||||| Sbjct: 50963 caaccccaacataacagtaca 50983
>gb|AF073310.1|AF073310 Homo sapiens insulin receptor substrate-2 (IRS2) mRNA, complete cds Length = 6996 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 gcggcctctacgccgcacgggcgaa 29 |||||| |||||||||||||||||| Sbjct: 3144 gcggccgctacgccgcacgggcgaa 3120
>gb|M59249.1|PFAPHOSKIN P.falciparum 3-phosphoglycerate kinase gene, complete cds Length = 1377 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 gttggaggtggagatacagct 435 ||||||||||||||||||||| Sbjct: 1122 gttggaggtggagatacagct 1142
>gb|AC102004.7| Mus musculus chromosome 15, clone RP24-489M6, complete sequence Length = 164810 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 taaccgggcctgatctcatggaca 157 ||||| |||||||||||||||||| Sbjct: 62161 taaccaggcctgatctcatggaca 62138
>gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone mth2-71n23, complete sequence Length = 125195 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 cctgatctcatggacaaaat 161 |||||||||||||||||||| Sbjct: 18166 cctgatctcatggacaaaat 18185
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 79 ggccagctgatgaccaccaccgaggtggagaa 110 |||||||||| |||||||||||||| ||||| Sbjct: 959400 ggccagctgaccaccaccaccgaggtcgagaa 959369
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 caagaggatgtcgagtttgt 218 |||||||||||||||||||| Sbjct: 962574 caagaggatgtcgagtttgt 962555
>gb|AC129328.4| Mus musculus BAC clone RP23-15O6 from chromosome 17, complete sequence Length = 234041 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 atatatttgacaaaatatgc 467 |||||||||||||||||||| Sbjct: 154499 atatatttgacaaaatatgc 154480
>gb|DQ366735.1| Uncultured Prochlorococcus marinus clone HOT0M-2B5 genomic sequence Length = 35254 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 tgtgcaatatgtgatggagc 380 |||||||||||||||||||| Sbjct: 17891 tgtgcaatatgtgatggagc 17872
>emb|AL357394.11| Human DNA sequence from clone RP11-469B13 on chromosome 10, complete sequence Length = 185850 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 326 gtgaagaagaattttggagcagaggtat 353 ||||||||||| ||||||| |||||||| Sbjct: 104313 gtgaagaagaaatttggagaagaggtat 104340
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggccagctgatgaccaccac 98 |||||||||||||||||||| Sbjct: 2853982 ggccagctgatgaccaccac 2854001
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggccagctgatgaccaccac 98 |||||||||||||||||||| Sbjct: 325552 ggccagctgatgaccaccac 325571
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggccagctgatgaccaccac 98 |||||||||||||||||||| Sbjct: 264550 ggccagctgatgaccaccac 264569
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ggccagctgatgaccaccac 98 |||||||||||||||||||| Sbjct: 186885 ggccagctgatgaccaccac 186904
>gb|AC002553.2| Homo sapiens chromosome , clone CTC-529I10, complete sequence Length = 158314 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 agtttgtggatgtgaagagc 231 |||||||||||||||||||| Sbjct: 109722 agtttgtggatgtgaagagc 109741
>ref|XM_224905.3| PREDICTED: Rattus norvegicus similar to 6430573F11Rik protein (predicted) (LOC306504), mRNA Length = 1836 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tcccggaggccagctgatga 91 |||||||||||||||||||| Sbjct: 414 tcccggaggccagctgatga 433
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 8.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 73 cccggaggccagctgatgaccaccaccgaggtggagaatt 112 ||||| ||||| ||||||||||||| ||||| ||||||| Sbjct: 2643972 cccggcggccaattgatgaccaccactgaggtagagaatt 2644011
>gb|AY104846.1| Zea mays PCO061833 mRNA sequence Length = 1380 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 91 accaccaccgaggtggagaatttccctgggttccccgacggcat 134 ||||||||||| || ||||| ||||| || |||||| ||||||| Sbjct: 285 accaccaccgacgtcgagaacttcccgggcttccccaacggcat 328 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,136,106 Number of Sequences: 3902068 Number of extensions: 4136106 Number of successful extensions: 72301 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71508 Number of HSP's gapped (non-prelim): 792 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)