| Clone Name | baal35d06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 273 acaccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagc 332 ||||| ||||||||||||| || ||| ||| ||||||||||| |||||||||| |||| Sbjct: 113093 acaccatcgtcgaggaggcagaagggaggcatatcaccaaccaagggatgctcccgcagc 113034 Query: 333 tcaag 337 ||||| Sbjct: 113033 tcaag 113029 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 279 tcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctcaaga 338 |||||||||||||||| ||||||| | ||| ||||| |||||||||| |||||||||| Sbjct: 121405 tcgtcgaggaggctgaagggcggcacgtcagaaaccaagggatgctccagcagctcaaga 121346 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Minus Query: 274 caccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagct 333 ||||||||||||||| ||||| ||||| |||| ||||| |||||| |||||||||| Sbjct: 117801 caccgtcgtcgaggaagctgagcagcggcatgtcacgaaccatgggatgatccgtcagct 117742 Query: 334 c 334 | Sbjct: 117741 c 117741
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 273 acaccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagc 332 ||||| ||||||||||||| || ||| ||| ||||||||||| |||||||||| |||| Sbjct: 26262045 acaccatcgtcgaggaggcagaagggaggcatatcaccaaccaagggatgctcccgcagc 26261986 Query: 333 tcaag 337 ||||| Sbjct: 26261985 tcaag 26261981 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 279 tcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctcaaga 338 |||||||||||||||| ||||||| | ||| ||||| |||||||||| |||||||||| Sbjct: 26270357 tcgtcgaggaggctgaagggcggcacgtcagaaaccaagggatgctccagcagctcaaga 26270298 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Minus Query: 274 caccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagct 333 ||||||||||||||| ||||| ||||| |||| ||||| |||||| |||||||||| Sbjct: 26266753 caccgtcgtcgaggaagctgagcagcggcatgtcacgaaccatgggatgatccgtcagct 26266694 Query: 334 c 334 | Sbjct: 26266693 c 26266693
>gb|AC122210.5| Mus musculus BAC clone RP23-96G7 from chromosome 10, complete sequence Length = 231988 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 500 ggcgatggtagcagcagcaacagagaag 527 |||||||| ||||||||||||||||||| Sbjct: 116182 ggcgatggcagcagcagcaacagagaag 116209
>ref|NM_191805.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Plus Query: 280 cgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctc 334 |||||||||||| || | ||||| |||||||||| ||| |||||||| |||||| Sbjct: 141 cgtcgaggaggccgaggcgcggcacatcaccaacaaggccatgctccggcagctc 195
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Plus Query: 280 cgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctc 334 |||||||||||| || | ||||| |||||||||| ||| |||||||| |||||| Sbjct: 30052678 cgtcgaggaggccgaggcgcggcacatcaccaacaaggccatgctccggcagctc 30052732
>gb|AC011755.7| Homo sapiens BAC clone RP11-575M22 from 2, complete sequence Length = 179110 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 613 tacaggtatgaaggagtttcttt 635 ||||||||||||||||||||||| Sbjct: 67865 tacaggtatgaaggagtttcttt 67887
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Plus Query: 280 cgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctc 334 |||||||||||| || | ||||| |||||||||| ||| |||||||| |||||| Sbjct: 48668 cgtcgaggaggccgaggcgcggcacatcaccaacaaggccatgctccggcagctc 48722
>dbj|AK105712.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E11, full insert sequence Length = 1607 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Plus Query: 280 cgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctc 334 |||||||||||| || | ||||| |||||||||| ||| |||||||| |||||| Sbjct: 159 cgtcgaggaggccgaggcgcggcacatcaccaacaaggccatgctccggcagctc 213
>gb|AC170594.2| Mus musculus BAC clone RP24-425N5 from chromosome 17, complete sequence Length = 161769 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 509 agcagcagcaacagagaagcagcagca 535 |||||||||| |||||||||||||||| Sbjct: 93683 agcagcagcagcagagaagcagcagca 93709 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 509 agcagcagcaacagagaagcagcagca 535 |||||||||| |||||||||||||||| Sbjct: 70475 agcagcagcagcagagaagcagcagca 70501 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 509 agcagcagcaacagagaagcagcagca 535 |||||||||| |||||||||||||||| Sbjct: 47292 agcagcagcagcagagaagcagcagca 47318 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 509 agcagcagcaacagagaagcagcagca 535 |||||||||| |||||||||||||||| Sbjct: 24047 agcagcagcagcagagaagcagcagca 24073
>emb|CR352223.11| Zebrafish DNA sequence from clone CH211-124N19 in linkage group 9, complete sequence Length = 168212 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 437 tctgctctgctgtctgaatcca 458 |||||||||||||||||||||| Sbjct: 37947 tctgctctgctgtctgaatcca 37968
>ref|XM_475753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1464 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 274 caccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagct 333 ||||||||||||||| ||||| ||||| |||| ||||| |||||| |||||||||| Sbjct: 171 caccgtcgtcgaggaagctgagcagcggcatgtcacgaaccatgggatgatccgtcagct 230 Query: 334 c 334 | Sbjct: 231 c 231
>ref|NM_194761.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0013J21.20), mRNA Length = 1443 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gtcgaggaggctgatgggcggcgcatcac 309 |||||||||||||| ||||||| |||||| Sbjct: 142 gtcgaggaggctgaggggcggcacatcac 170
>ref|NM_194754.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0013J21.13), mRNA Length = 1461 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 278 gtcgtcgaggaggctgatgggcggcgcatcaccaacc 314 |||||||||||||| |||||||| ||||||||||| Sbjct: 139 gtcgtcgaggaggcagatgggcgatacatcaccaacc 175
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gtcgaggaggctgatgggcggcgcatcac 309 |||||||||||||| ||||||| |||||| Sbjct: 126390 gtcgaggaggctgaggggcggcacatcac 126418 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 278 gtcgtcgaggaggctgatgggcggcgcatcaccaacc 314 |||||||||||||| |||||||| ||||||||||| Sbjct: 86132 gtcgtcgaggaggcagatgggcgatacatcaccaacc 86168 Score = 40.1 bits (20), Expect = 9.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 gtcgtcgaggaggctgatgggcggcgcatcaccaac 313 |||||||||||||| |||||||| |||||||||| Sbjct: 104267 gtcgtcgaggaggcggatgggcgatacatcaccaac 104302
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 569 gaagagctgcaccggttggtttctt 593 |||||||||||| |||||||||||| Sbjct: 28508 gaagagctgcacgggttggtttctt 28532
>gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete sequence Length = 378763 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 507 gtagcagcagcaacagagaagcagcagca 535 |||||||||||| ||||| |||||||||| Sbjct: 376147 gtagcagcagcagcagagcagcagcagca 376119 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 507 gtagcagcagcaacagagaagcagcagca 535 |||||||||||| ||||| |||||||||| Sbjct: 375576 gtagcagcagcagcagagcagcagcagca 375548
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gtcgaggaggctgatgggcggcgcatcac 309 |||||||||||||| ||||||| |||||| Sbjct: 2148250 gtcgaggaggctgaggggcggcacatcac 2148278 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 278 gtcgtcgaggaggctgatgggcggcgcatcaccaacc 314 |||||||||||||| |||||||| ||||||||||| Sbjct: 2107992 gtcgtcgaggaggcagatgggcgatacatcaccaacc 2108028 Score = 40.1 bits (20), Expect = 9.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 gtcgtcgaggaggctgatgggcggcgcatcaccaac 313 |||||||||||||| |||||||| |||||||||| Sbjct: 2126127 gtcgtcgaggaggcggatgggcgatacatcaccaac 2126162
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 569 gaagagctgcaccggttggtttctt 593 |||||||||||| |||||||||||| Sbjct: 12929592 gaagagctgcacgggttggtttctt 12929616 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gtcgaggaggctgatgggcggcgcatcac 309 |||||||||||||| ||||||| |||||| Sbjct: 2148250 gtcgaggaggctgaggggcggcacatcac 2148278 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 278 gtcgtcgaggaggctgatgggcggcgcatcaccaacc 314 |||||||||||||| |||||||| ||||||||||| Sbjct: 2107992 gtcgtcgaggaggcagatgggcgatacatcaccaacc 2108028 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ggtggtgccggtggcgatgg 507 |||||||||||||||||||| Sbjct: 13912308 ggtggtgccggtggcgatgg 13912327 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ccgtcgtcgaggaggctgat 295 |||||||||||||||||||| Sbjct: 2972346 ccgtcgtcgaggaggctgat 2972327 Score = 40.1 bits (20), Expect = 9.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 gtcgtcgaggaggctgatgggcggcgcatcaccaac 313 |||||||||||||| |||||||| |||||||||| Sbjct: 2126127 gtcgtcgaggaggcggatgggcgatacatcaccaac 2126162
>gb|AC006346.1|AC006346 Homo sapiens PAC clone RP5-820G22 from 7, complete sequence Length = 130336 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 627 agtttcttttcttcttggaga 647 ||||||||||||||||||||| Sbjct: 68127 agtttcttttcttcttggaga 68107
>dbj|AK107660.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-G09, full insert sequence Length = 1565 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 274 caccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagct 333 ||||||||||||||| ||||| ||||| |||| ||||| |||||| |||||||||| Sbjct: 232 caccgtcgtcgaggaagctgagcagcggcatgtcacgaaccatgggatgatccgtcagct 291 Query: 334 c 334 | Sbjct: 292 c 292
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 499 tggcgatggtagcagcagcaa 519 ||||||||||||||||||||| Sbjct: 1061474 tggcgatggtagcagcagcaa 1061494
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 569 gaagagctgcaccggttggtttctt 593 |||||||||||| |||||||||||| Sbjct: 12936932 gaagagctgcacgggttggtttctt 12936956 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 gtcgaggaggctgatgggcggcgcatcac 309 |||||||||||||| ||||||| |||||| Sbjct: 2148201 gtcgaggaggctgaggggcggcacatcac 2148229 Score = 42.1 bits (21), Expect = 2.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 278 gtcgtcgaggaggctgatgggcggcgcatcaccaacc 314 |||||||||||||| |||||||| ||||||||||| Sbjct: 2107943 gtcgtcgaggaggcagatgggcgatacatcaccaacc 2107979 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ggtggtgccggtggcgatgg 507 |||||||||||||||||||| Sbjct: 13919650 ggtggtgccggtggcgatgg 13919669 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ccgtcgtcgaggaggctgat 295 |||||||||||||||||||| Sbjct: 2972267 ccgtcgtcgaggaggctgat 2972248 Score = 40.1 bits (20), Expect = 9.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 gtcgtcgaggaggctgatgggcggcgcatcaccaac 313 |||||||||||||| |||||||| |||||||||| Sbjct: 2126078 gtcgtcgaggaggcggatgggcgatacatcaccaac 2126113
>emb|AJ876383.1| Clarias gariepinus 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2 Length = 3171 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 486 ccggtggtgccggtggcgatggtag 510 ||||||||||||||||||| ||||| Sbjct: 2068 ccggtggtgccggtggcgacggtag 2092
>gb|AC000373.1|HSAC000373 Human cosmid g1862d218, complete sequence Length = 39602 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 627 agtttcttttcttcttggaga 647 ||||||||||||||||||||| Sbjct: 15480 agtttcttttcttcttggaga 15460
>ref|NM_194756.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0013J21.15), mRNA Length = 1353 Score = 40.1 bits (20), Expect = 9.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 278 gtcgtcgaggaggctgatgggcggcgcatcaccaac 313 |||||||||||||| |||||||| |||||||||| Sbjct: 142 gtcgtcgaggaggcggatgggcgatacatcaccaac 177
>ref|NM_196477.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0045B21.10), mRNA Length = 1593 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ggtggtgccggtggcgatgg 507 |||||||||||||||||||| Sbjct: 1233 ggtggtgccggtggcgatgg 1252
>ref|NM_189893.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2283 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 aggagtttcttttcttcttg 643 |||||||||||||||||||| Sbjct: 1697 aggagtttcttttcttcttg 1678
>ref|NM_194166.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1566 Score = 40.1 bits (20), Expect = 9.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 353 atgtacacaggccactacattcttgacgccttgagattcc 392 ||||||| ||| |||||||||||||| |||| ||||||| Sbjct: 223 atgtacagagggtactacattcttgactccttcagattcc 262
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 ggtggtgccggtggcgatgg 507 |||||||||||||||||||| Sbjct: 80934 ggtggtgccggtggcgatgg 80953
>gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, complete sequence Length = 196427 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 tgaaggagtttcttttcttc 640 |||||||||||||||||||| Sbjct: 139589 tgaaggagtttcttttcttc 139570
>gb|AY360079.1| Gibberella zeae strain Chab102 28S ribosomal RNA gene and intergenic spacer, partial sequence Length = 519 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 190 gcagcagccaccgagaagcagcagcacc 163
>gb|AY360078.1| Gibberella zeae strain Pr82 28S ribosomal RNA gene and intergenic spacer, partial sequence Length = 694 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 373 gcagcagccaccgagaagcagcagcacc 346
>gb|AY360077.1| Gibberella zeae strain CO37 28S ribosomal RNA gene and intergenic spacer, partial sequence Length = 727 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 373 gcagcagccaccgagaagcagcagcacc 346
>gb|AY360076.1| Gibberella zeae strain Ch324 28S ribosomal RNA gene and intergenic spacer, partial sequence Length = 699 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 373 gcagcagccaccgagaagcagcagcacc 346
>gb|AY360075.1| Gibberella zeae strain Pr13 28S ribosomal RNA gene and intergenic spacer, partial sequence Length = 728 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 373 gcagcagccaccgagaagcagcagcacc 346
>gb|AY360074.1| Gibberella zeae strain G35 28S ribosomal RNA gene and intergenic spacer, partial sequence Length = 728 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 373 gcagcagccaccgagaagcagcagcacc 346
>gb|AY360073.1| Gibberella zeae strain CO55 28S ribosomal RNA gene and intergenic spacer, partial sequence Length = 728 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 373 gcagcagccaccgagaagcagcagcacc 346
>gb|AY360072.1| Gibberella zeae strain Chab507 28S ribosomal RNA gene and intergenic spacer, partial sequence Length = 699 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 373 gcagcagccaccgagaagcagcagcacc 346
>gb|AY360071.1| Gibberella zeae strain Chab213 28S ribosomal RNA gene and intergenic spacer, partial sequence Length = 649 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 373 gcagcagccaccgagaagcagcagcacc 346
>gb|AY360070.1| Gibberella zeae strain Kr14 28S ribosomal RNA gene and intergenic spacer, partial sequence Length = 649 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 373 gcagcagccaccgagaagcagcagcacc 346
>gb|AY224586.1| Oryza sativa (japonica cultivar-group) isolate 31086 heavy meromyosin-like protein mRNA, partial cds Length = 1266 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 aggagtttcttttcttcttg 643 |||||||||||||||||||| Sbjct: 680 aggagtttcttttcttcttg 661
>gb|AC130843.3| Mus musculus BAC clone RP24-501N9 from chromosome 1, complete sequence Length = 141921 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 tggtagcagcagcaacagag 524 |||||||||||||||||||| Sbjct: 139147 tggtagcagcagcaacagag 139128
>gb|AC125535.4| Mus musculus BAC clone RP24-69I6 from chromosome 12, complete sequence Length = 178473 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 agcagcaacagagaagcagc 531 |||||||||||||||||||| Sbjct: 163609 agcagcaacagagaagcagc 163628
>gb|AC125409.3| Mus musculus BAC clone RP23-127O4 from 12, complete sequence Length = 209670 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 agcagcaacagagaagcagc 531 |||||||||||||||||||| Sbjct: 187969 agcagcaacagagaagcagc 187950
>emb|AJ862327.1| Fusarium pseudograminearum IGS, isolate Fps6 Length = 2192 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 173 gcagcagccaccgagaagcagcagcacc 146
>emb|AJ854659.1| Fusarium culmorum IGS, isolate CECT 2148 Length = 1935 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 173 gcagcagccaccgagaagcagcagcacc 146
>emb|AJ854657.1| Fusarium graminearum IGS, isolate Fg5 Length = 1995 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcagcagcaacagagaagcagcagcacc 537 |||||||| || |||||||||||||||| Sbjct: 173 gcagcagccaccgagaagcagcagcacc 146
>gb|AC162931.4| Mus musculus BAC clone RP23-213P10 from chromosome 9, complete sequence Length = 204861 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 ggtatgaaggagtttctttt 636 |||||||||||||||||||| Sbjct: 68089 ggtatgaaggagtttctttt 68070
>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the 3' end of the KCNN3 gene for potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, a novel gene and the 5' end of the ADAR gene for adenosine deaminase, RNA-specific, complete sequence Length = 173014 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 499 tggcgatggtagcagcagcaacag 522 |||||| ||||||||||||||||| Sbjct: 95914 tggcgaaggtagcagcagcaacag 95891
>gb|AC110597.7| Homo sapiens chromosome 18, clone CTD-2541J13, complete sequence Length = 180310 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 629 tttcttttcttcttggagac 648 |||||||||||||||||||| Sbjct: 130193 tttcttttcttcttggagac 130174
>emb|AL583921.1|MLEPRTN5 Mycobacterium leprae strain TN complete genome; segment 5/10 Length = 332450 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 cggtggtgccggtggcgatg 506 |||||||||||||||||||| Sbjct: 138448 cggtggtgccggtggcgatg 138467
>emb|AL049913.1|MLCB1610 Mycobacterium leprae cosmid B1610 Length = 40055 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 cggtggtgccggtggcgatg 506 |||||||||||||||||||| Sbjct: 10502 cggtggtgccggtggcgatg 10521
>emb|AJ010387.1|DME010387 Drosophila melanogaster mRNA for beadex/dLMO protein Length = 2001 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ctccggtggtgccggtggcg 503 |||||||||||||||||||| Sbjct: 446 ctccggtggtgccggtggcg 465
>gb|AC157802.8| Mus musculus chromosome 1, clone RP24-297D18, complete sequence Length = 154309 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 tggtagcagcagcaacagag 524 |||||||||||||||||||| Sbjct: 5824 tggtagcagcagcaacagag 5805
>gb|AC107987.2| Homo sapiens chromosome 18, clone CTD-3212L22, complete sequence Length = 40980 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 tttcttttcttcttggagac 648 |||||||||||||||||||| Sbjct: 2200 tttcttttcttcttggagac 2219
>gb|AC022662.6| Homo sapiens chromosome 18, clone RP11-29O13, complete sequence Length = 144192 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 tttcttttcttcttggagac 648 |||||||||||||||||||| Sbjct: 107265 tttcttttcttcttggagac 107284
>gb|AC108095.2| Homo sapiens chromosome 5 clone CTD-3080F23, complete sequence Length = 149102 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 tcactgacttctgctctgct 447 |||||||||||||||||||| Sbjct: 72589 tcactgacttctgctctgct 72608
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ccgtcgtcgaggaggctgat 295 |||||||||||||||||||| Sbjct: 60768 ccgtcgtcgaggaggctgat 60749
>gb|AC148988.5| Mus musculus BAC clone RP23-85B15 from chromosome 7, complete sequence Length = 154177 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 621 tgaaggagtttcttttcttc 640 |||||||||||||||||||| Sbjct: 106880 tgaaggagtttcttttcttc 106899
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 353 atgtacacaggccactacattcttgacgccttgagattcc 392 ||||||| ||| |||||||||||||| |||| ||||||| Sbjct: 965199 atgtacagagggtactacattcttgactccttcagattcc 965160
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 ttggagaactgcatgtttgg 711 |||||||||||||||||||| Sbjct: 25123532 ttggagaactgcatgtttgg 25123513
>gb|AC097709.3| Homo sapiens BAC clone RP11-19B4 from 4, complete sequence Length = 160741 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 agacactgaggcaaggaatg 355 |||||||||||||||||||| Sbjct: 101044 agacactgaggcaaggaatg 101025
>gb|AC108029.3| Homo sapiens BAC clone RP11-88J6 from 4, complete sequence Length = 70132 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 agacactgaggcaaggaatg 355 |||||||||||||||||||| Sbjct: 36683 agacactgaggcaaggaatg 36702
>ref|XM_240446.3| PREDICTED: Rattus norvegicus unc-5 homolog D (C. elegans) (predicted) (Unc5d_predicted), mRNA Length = 3429 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 gttggtttcttctcttgaag 602 |||||||||||||||||||| Sbjct: 3183 gttggtttcttctcttgaag 3202
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 ccggtggtgccggtggcgat 505 |||||||||||||||||||| Sbjct: 4770120 ccggtggtgccggtggcgat 4770101
>dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_A04 Length = 128906 Score = 40.1 bits (20), Expect = 9.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 353 atgtacacaggccactacattcttgacgccttgagattcc 392 ||||||| ||| |||||||||||||| |||| ||||||| Sbjct: 69546 atgtacagagggtactacattcttgactccttcagattcc 69507
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 ttggagaactgcatgtttgg 711 |||||||||||||||||||| Sbjct: 23925 ttggagaactgcatgtttgg 23906
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 ttggagaactgcatgtttgg 711 |||||||||||||||||||| Sbjct: 136520 ttggagaactgcatgtttgg 136501
>dbj|AK065451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021C09, full insert sequence Length = 2576 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 aggagtttcttttcttcttg 643 |||||||||||||||||||| Sbjct: 1750 aggagtttcttttcttcttg 1731
>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204618 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 tgaggcaaggaatgtacaca 361 |||||||||||||||||||| Sbjct: 137221 tgaggcaaggaatgtacaca 137240
>gb|AC026191.4| Homo sapiens chromosome 3 clone RP11-380O24 map 3p, complete sequence Length = 164528 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttctgctctgctgtctgaat 455 |||||||||||||||||||| Sbjct: 62747 ttctgctctgctgtctgaat 62728
>emb|AL928973.3| Mouse DNA sequence from clone RP23-259J7 on chromosome 2, complete sequence Length = 157458 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 690 tcttggagaactgcatgttt 709 |||||||||||||||||||| Sbjct: 68987 tcttggagaactgcatgttt 69006
>gb|AC018506.5| Homo sapiens chromosome 3 clone RP11-58B17 map 3p, complete sequence Length = 191575 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttctgctctgctgtctgaat 455 |||||||||||||||||||| Sbjct: 189535 ttctgctctgctgtctgaat 189516 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,491,626 Number of Sequences: 3902068 Number of extensions: 6491626 Number of successful extensions: 165789 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 165068 Number of HSP's gapped (non-prelim): 721 length of query: 713 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 690 effective length of database: 17,143,297,704 effective search space: 11828875415760 effective search space used: 11828875415760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)