| Clone Name | baal35c17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107731.1| Zea mays PCO069957 mRNA sequence Length = 925 Score = 361 bits (182), Expect = 2e-96 Identities = 399/469 (85%), Gaps = 3/469 (0%) Strand = Plus / Plus Query: 53 agaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtcctgtctgcccca 112 |||||||||||||||| | ||||| ||| | ||||||||||||||||| | ||||| || Sbjct: 90 agaaatggctgcaatacctgcagcgatcccgggctgctgctcttcgtctcgcctgcctca 149 Query: 113 gtcccagcggggcctcccgtcctccgcaaggagaaggcacttcaaggtcacggccatggc 172 | | || || |||||| ||||| |||| ||||||| ||||||||||||||||||||| Sbjct: 150 g--cttgctgg-cctccctgcctccacaagcagaaggcgcttcaaggtcacggccatggc 206 Query: 173 tcccaagaacaaggtgaacaagtacgacgatgggtggtccaagcagtggttcggcgcggg 232 ||||| || ||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 207 gcccaaaaagaaggtgaaccgctacgacgagagctggtcgaagcagtggttcggcgcggg 266 Query: 233 gatcttcgcggaggggagcgaggaggcgtcggtggacgtgttcaagaagctggagaagcg 292 |||||||||||||| |||||||||| ||| |||||||||||||||||||||||| ||| Sbjct: 267 catcttcgcggagggcagcgaggaggtgtccgtggacgtgttcaagaagctggagcggcg 326 Query: 293 caaggtgctgagcaccgtcgagaaggcagggctgctgtccaaggcggaggagctcggcgt 352 |||||||||||||||||| |||||||| || |||||||||||||| |||||||| ||| | Sbjct: 327 caaggtgctgagcaccgtggagaaggccggcctgctgtccaaggccgaggagctgggcct 386 Query: 353 cacgctctcctcgctggagaagctcggactgctctccaaggccgaggacctgggactcct 412 ||||||||||||||||||||||| || |||||||||||||||||||||||||| || || Sbjct: 387 gacgctctcctcgctggagaagctgggcctgctctccaaggccgaggacctgggcctgct 446 Query: 413 cagcctcgtcgagagcgcagccacagtgtccccggccgtgctcgcatcgctgtcgctgcc 472 |||||||||||||| ||| || ||||||| |||| ||||| || | |||||||| Sbjct: 447 cagcctcgtcgagaccgcggcggggacgtccccgtccgtcctcgcctccatctcgctgcc 506 Query: 473 gctgctcgtcgcctccatagccacggtcgtcttcgtgccggacgactcc 521 ||| ||||| ||| || | ||| |||| ||| ||||||| ||||||||| Sbjct: 507 gctcctcgtggccgccgtcgccgcggtggtcgtcgtgcccgacgactcc 555 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 579 gggctgttcgtcggctctgtcgtgctcgatggactgcagga 619 ||||||||||| |||||||||||||||| ||| |||||||| Sbjct: 613 gggctgttcgtgggctctgtcgtgctcgctggcctgcagga 653
>ref|NM_192526.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 564 Score = 353 bits (178), Expect = 5e-94 Identities = 250/274 (91%) Strand = Plus / Plus Query: 152 cttcaaggtcacggccatggctcccaagaacaaggtgaacaagtacgacgatgggtggtc 211 ||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||| Sbjct: 87 cttcaaggtcacggccatggctccccagaagaaggtgaacaggtacgacgagaagtggtc 146 Query: 212 caagcagtggttcggcgcggggatcttcgcggaggggagcgaggaggcgtcggtggacgt 271 |||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 147 gaagcagtggttcggggcggggatattcgcggaggggagcgaggaggtggaggtggacgt 206 Query: 272 gttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaaggcagggctgctgtc 331 ||||||||||||||||| ||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 207 gttcaagaagctggagaggcggaaggtgctgagcacggtggagaaggccgggctgctgtc 266 Query: 332 caaggcggaggagctcggcgtcacgctctcctcgctggagaagctcggactgctctccaa 391 || ||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| Sbjct: 267 cagggcggaggagctcggcgtcacgctctcctcgctcgaggagctcggcctcctctccaa 326 Query: 392 ggccgaggacctgggactcctcagcctcgtcgag 425 |||||||||||| || |||||||||||||||||| Sbjct: 327 ggccgaggacctcggcctcctcagcctcgtcgag 360 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 71 agcagcaatctccggctgctgctcttcgtc 100 ||||||||||||| ||||||||||||||| Sbjct: 15 agcagcaatctccacctgctgctcttcgtc 44
>dbj|AK099180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103B06, full insert sequence Length = 686 Score = 353 bits (178), Expect = 5e-94 Identities = 250/274 (91%) Strand = Plus / Plus Query: 152 cttcaaggtcacggccatggctcccaagaacaaggtgaacaagtacgacgatgggtggtc 211 ||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||| Sbjct: 125 cttcaaggtcacggccatggctccccagaagaaggtgaacaggtacgacgagaagtggtc 184 Query: 212 caagcagtggttcggcgcggggatcttcgcggaggggagcgaggaggcgtcggtggacgt 271 |||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 185 gaagcagtggttcggggcggggatattcgcggaggggagcgaggaggtggaggtggacgt 244 Query: 272 gttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaaggcagggctgctgtc 331 ||||||||||||||||| ||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 245 gttcaagaagctggagaggcggaaggtgctgagcacggtggagaaggccgggctgctgtc 304 Query: 332 caaggcggaggagctcggcgtcacgctctcctcgctggagaagctcggactgctctccaa 391 || ||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| Sbjct: 305 cagggcggaggagctcggcgtcacgctctcctcgctcgaggagctcggcctcctctccaa 364 Query: 392 ggccgaggacctgggactcctcagcctcgtcgag 425 |||||||||||| || |||||||||||||||||| Sbjct: 365 ggccgaggacctcggcctcctcagcctcgtcgag 398 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Plus Query: 45 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 100 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 27 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 82
>dbj|AK071353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023094M23, full insert sequence Length = 754 Score = 353 bits (178), Expect = 5e-94 Identities = 250/274 (91%) Strand = Plus / Plus Query: 152 cttcaaggtcacggccatggctcccaagaacaaggtgaacaagtacgacgatgggtggtc 211 ||||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||| Sbjct: 141 cttcaaggtcacggccatggctccccagaagaaggtgaacaggtacgacgagaagtggtc 200 Query: 212 caagcagtggttcggcgcggggatcttcgcggaggggagcgaggaggcgtcggtggacgt 271 |||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 201 gaagcagtggttcggggcggggatattcgcggaggggagcgaggaggtggaggtggacgt 260 Query: 272 gttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaaggcagggctgctgtc 331 ||||||||||||||||| ||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 261 gttcaagaagctggagaggcggaaggtgctgagcacggtggagaaggccgggctgctgtc 320 Query: 332 caaggcggaggagctcggcgtcacgctctcctcgctggagaagctcggactgctctccaa 391 || ||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| Sbjct: 321 cagggcggaggagctcggcgtcacgctctcctcgctcgaggagctcggcctcctctccaa 380 Query: 392 ggccgaggacctgggactcctcagcctcgtcgag 425 |||||||||||| || |||||||||||||||||| Sbjct: 381 ggccgaggacctcggcctcctcagcctcgtcgag 414 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Plus Query: 45 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 100 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 43 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 98
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 305 bits (154), Expect = 1e-79 Identities = 220/242 (90%) Strand = Plus / Minus Query: 184 aggtgaacaagtacgacgatgggtggtccaagcagtggttcggcgcggggatcttcgcgg 243 ||||||||| ||||||||| |||||| |||||||||||||| |||||||| ||||||| Sbjct: 22751239 aggtgaacaggtacgacgagaagtggtcgaagcagtggttcggggcggggatattcgcgg 22751180 Query: 244 aggggagcgaggaggcgtcggtggacgtgttcaagaagctggagaagcgcaaggtgctga 303 ||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 22751179 aggggagcgaggaggtggaggtggacgtgttcaagaagctggagaggcggaaggtgctga 22751120 Query: 304 gcaccgtcgagaaggcagggctgctgtccaaggcggaggagctcggcgtcacgctctcct 363 |||| || |||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 22751119 gcacggtggagaaggccgggctgctgtccagggcggaggagctcggcgtcacgctctcct 22751060 Query: 364 cgctggagaagctcggactgctctccaaggccgaggacctgggactcctcagcctcgtcg 423 |||| ||| ||||||| || |||||||||||||||||||| || |||||||||||||||| Sbjct: 22751059 cgctcgaggagctcggcctcctctccaaggccgaggacctcggcctcctcagcctcgtcg 22751000 Query: 424 ag 425 || Sbjct: 22750999 ag 22750998 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 152 cttcaaggtcacggccatggctcccaagaacaaggt 187 ||||||||||||||||||||||||| |||| ||||| Sbjct: 22751370 cttcaaggtcacggccatggctccccagaagaaggt 22751335 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 45 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 100 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 22751468 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 22751413
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 305 bits (154), Expect = 1e-79 Identities = 220/242 (90%) Strand = Plus / Minus Query: 184 aggtgaacaagtacgacgatgggtggtccaagcagtggttcggcgcggggatcttcgcgg 243 ||||||||| ||||||||| |||||| |||||||||||||| |||||||| ||||||| Sbjct: 127951 aggtgaacaggtacgacgagaagtggtcgaagcagtggttcggggcggggatattcgcgg 127892 Query: 244 aggggagcgaggaggcgtcggtggacgtgttcaagaagctggagaagcgcaaggtgctga 303 ||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 127891 aggggagcgaggaggtggaggtggacgtgttcaagaagctggagaggcggaaggtgctga 127832 Query: 304 gcaccgtcgagaaggcagggctgctgtccaaggcggaggagctcggcgtcacgctctcct 363 |||| || |||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127831 gcacggtggagaaggccgggctgctgtccagggcggaggagctcggcgtcacgctctcct 127772 Query: 364 cgctggagaagctcggactgctctccaaggccgaggacctgggactcctcagcctcgtcg 423 |||| ||| ||||||| || |||||||||||||||||||| || |||||||||||||||| Sbjct: 127771 cgctcgaggagctcggcctcctctccaaggccgaggacctcggcctcctcagcctcgtcg 127712 Query: 424 ag 425 || Sbjct: 127711 ag 127710 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 152 cttcaaggtcacggccatggctcccaagaacaaggt 187 ||||||||||||||||||||||||| |||| ||||| Sbjct: 128082 cttcaaggtcacggccatggctccccagaagaaggt 128047 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 45 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 100 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 128180 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 128125
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 305 bits (154), Expect = 1e-79 Identities = 220/242 (90%) Strand = Plus / Minus Query: 184 aggtgaacaagtacgacgatgggtggtccaagcagtggttcggcgcggggatcttcgcgg 243 ||||||||| ||||||||| |||||| |||||||||||||| |||||||| ||||||| Sbjct: 68628 aggtgaacaggtacgacgagaagtggtcgaagcagtggttcggggcggggatattcgcgg 68569 Query: 244 aggggagcgaggaggcgtcggtggacgtgttcaagaagctggagaagcgcaaggtgctga 303 ||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| Sbjct: 68568 aggggagcgaggaggtggaggtggacgtgttcaagaagctggagaggcggaaggtgctga 68509 Query: 304 gcaccgtcgagaaggcagggctgctgtccaaggcggaggagctcggcgtcacgctctcct 363 |||| || |||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 68508 gcacggtggagaaggccgggctgctgtccagggcggaggagctcggcgtcacgctctcct 68449 Query: 364 cgctggagaagctcggactgctctccaaggccgaggacctgggactcctcagcctcgtcg 423 |||| ||| ||||||| || |||||||||||||||||||| || |||||||||||||||| Sbjct: 68448 cgctcgaggagctcggcctcctctccaaggccgaggacctcggcctcctcagcctcgtcg 68389 Query: 424 ag 425 || Sbjct: 68388 ag 68387 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 152 cttcaaggtcacggccatggctcccaagaacaaggt 187 ||||||||||||||||||||||||| |||| ||||| Sbjct: 68759 cttcaaggtcacggccatggctccccagaagaaggt 68724 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 45 gaggaggcagaaatggctgcaatatcagcagcaatctccggctgctgctcttcgtc 100 ||||||| |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 68857 gaggaggaagaaatggctgccgtccaagcagcaatctccacctgctgctcttcgtc 68802
>ref|NM_106132.2| Arabidopsis thaliana CPK30; calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase AT1G74740 (CPK30) mRNA, complete cds Length = 2550 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 273 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 316 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 2518 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 2475
>ref|NM_106131.2| Arabidopsis thaliana unknown protein AT1G74730 mRNA, complete cds Length = 1178 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Plus Query: 273 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 316 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 305 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 348
>gb|AF386985.1|AF386985 Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 784 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Plus Query: 273 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 316 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 272 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 315
>gb|AY088988.1| Arabidopsis thaliana clone 12408 mRNA, complete sequence Length = 812 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Plus Query: 273 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 316 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 305 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 348
>gb|BT002152.1| Arabidopsis thaliana Unknown protein (At1g74730) mRNA, complete cds Length = 639 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Plus Query: 273 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 316 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 241 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 284
>gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 sequence, complete sequence Length = 115721 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 273 ttcaagaagctggagaagcgcaaggtgctgagcaccgtcgagaa 316 |||||||||||||||||||| || ||| |||||| ||| ||||| Sbjct: 95555 ttcaagaagctggagaagcgaaaagtgttgagcaacgttgagaa 95512
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 470 gccgctgctcgtcgcctccatagccacggtc 500 ||||||||||||||||| ||| ||||||||| Sbjct: 75068 gccgctgctcgtcgccttcatcgccacggtc 75098
>gb|AC114962.2| Homo sapiens chromosome 5 clone RP11-206N2, complete sequence Length = 107278 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 tagaggaagaagggagcagggga 43 ||||||||||||||||||||||| Sbjct: 68645 tagaggaagaagggagcagggga 68623
>ref|XM_505854.1| Yarrowia lipolytica CLIB122, YALI0F25091g predicted mRNA Length = 3024 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 caagaagctggagaagcgcaag 296 |||||||||||||||||||||| Sbjct: 2673 caagaagctggagaagcgcaag 2694
>ref|NM_137196.1| Drosophila melanogaster CG12964-RA (CG12964), mRNA Length = 3408 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 266 ggacgtgttcaagaagctggagaagcgcaa 295 ||||||||||||| |||||||| ||||||| Sbjct: 2346 ggacgtgttcaaggagctggagcagcgcaa 2375
>gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, region 51F-52A, BAC clone BACR03D24, complete sequence Length = 158402 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 266 ggacgtgttcaagaagctggagaagcgcaa 295 ||||||||||||| |||||||| ||||||| Sbjct: 137996 ggacgtgttcaaggagctggagcagcgcaa 137967
>emb|BX841924.1|CNS09Y5J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 757 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 273 ttcaagaagctggagaagcgcaaggtgctgagca 306 |||||||||||||||||||| || ||| |||||| Sbjct: 292 ttcaagaagctggagaagcgaaaagtgttgagca 325
>gb|AC132338.4| Mus musculus BAC clone RP24-158J16 from chromosome 5, complete sequence Length = 163304 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 agaagggagcaggggaagagga 49 |||||||||||||||||||||| Sbjct: 131308 agaagggagcaggggaagagga 131287
>gb|BT024280.1| Drosophila melanogaster IP14311 full insert cDNA Length = 3936 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Plus Query: 266 ggacgtgttcaagaagctggagaagcgcaa 295 ||||||||||||| |||||||| ||||||| Sbjct: 2548 ggacgtgttcaaggagctggagcagcgcaa 2577
>gb|AC125061.3| Mus musculus BAC clone RP23-418E13 from 5, complete sequence Length = 210342 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 agaagggagcaggggaagagga 49 |||||||||||||||||||||| Sbjct: 200640 agaagggagcaggggaagagga 200661
>gb|AC008369.1|AC008369 Drosophila melanogaster, chromosome 2R, region 52A4-52B4, P1 clones BACR48C01 and DS08592, complete sequence Length = 192366 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 266 ggacgtgttcaagaagctggagaagcgcaa 295 ||||||||||||| |||||||| ||||||| Sbjct: 890 ggacgtgttcaaggagctggagcagcgcaa 861
>gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40 of 73 of the complete sequence Length = 271178 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 266 ggacgtgttcaagaagctggagaagcgcaa 295 ||||||||||||| |||||||| ||||||| Sbjct: 78248 ggacgtgttcaaggagctggagcagcgcaa 78219
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 caagaagctggagaagcgcaag 296 |||||||||||||||||||||| Sbjct: 3243440 caagaagctggagaagcgcaag 3243461
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence Length = 248540 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 agggagcaggggaagaggagg 51 ||||||||||||||||||||| Sbjct: 176070 agggagcaggggaagaggagg 176050
>ref|XM_471967.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1341 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ctgccccagtcccagcggggcctcccgtc 133 |||||||||||||||||| ||||||||| Sbjct: 554 ctgccccagtcccagcggatcctcccgtc 582
>gb|AC153564.6| Mus musculus 10 BAC RP23-39C23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 241022 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aggaagaagggagcaggggaa 44 ||||||||||||||||||||| Sbjct: 16417 aggaagaagggagcaggggaa 16437
>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence Length = 176797 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ggagcaggggaagaggaggcagaaa 57 ||||| ||||||||||||||||||| Sbjct: 155507 ggagctggggaagaggaggcagaaa 155483
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggcggaggagctcggcgtcac 355 ||||||||||||||||||||| Sbjct: 185332 ggcggaggagctcggcgtcac 185352
>emb|AL023096.1|HS398I9 Human DNA sequence from clone RP3-398I9 on chromosome 1p34.3-36.13 Contains the 3' end of the RUNX3 gene for runt-related transcription factor 3 and a CpG island, complete sequence Length = 95241 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ccaagaacaaggtgaacaagt 195 ||||||||||||||||||||| Sbjct: 31729 ccaagaacaaggtgaacaagt 31709
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 caaggtgctgagcaccgtcga 313 ||||||||||||||||||||| Sbjct: 3745615 caaggtgctgagcaccgtcga 3745595
>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20, complete sequence Length = 145825 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 105 ctgccccagtcccagcggggcctcccgtc 133 |||||||||||||||||| ||||||||| Sbjct: 88844 ctgccccagtcccagcggatcctcccgtc 88816
>gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, complete sequence Length = 194973 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gcaggggaagaggaggcagaa 56 ||||||||||||||||||||| Sbjct: 147885 gcaggggaagaggaggcagaa 147905
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence Length = 148054 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ggagcaggggaagaggaggcagaaa 57 ||||| ||||||||||||||||||| Sbjct: 29947 ggagctggggaagaggaggcagaaa 29923
>ref|XM_944515.1| PREDICTED: Homo sapiens similar to glycerophosphodiester phosphodiesterase domain containing 5 (LOC654165), mRNA Length = 884 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 agggagcaggggaagaggagg 51 ||||||||||||||||||||| Sbjct: 4 agggagcaggggaagaggagg 24
>gb|AC121223.5| Rattus norvegicus BAC CH230-70M4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 263147 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 23 gaggaagaagggagcaggggaagaggagg 51 |||||||||||||||| |||| ||||||| Sbjct: 166914 gaggaagaagggagcacgggaggaggagg 166886
>gb|AC151989.4| Mus musculus BAC clone RP23-298C3 from chromosome 7, complete sequence Length = 217239 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ggagcaggggaagaggaggcagaaa 57 ||||||||||||||||||| ||||| Sbjct: 14033 ggagcaggggaagaggaggaagaaa 14009
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 105 ctgccccagtcccagcggggcctcccgtc 133 |||||||||||||||||| ||||||||| Sbjct: 16128094 ctgccccagtcccagcggatcctcccgtc 16128066 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gagcgaggaggcgtcggtgg 267 |||||||||||||||||||| Sbjct: 10692816 gagcgaggaggcgtcggtgg 10692835
>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence Length = 115368 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ggagcaggggaagaggaggcagaaa 57 ||||| ||||||||||||||||||| Sbjct: 6523 ggagctggggaagaggaggcagaaa 6499
>gb|AC110118.8| Rattus norvegicus BAC CH230-310N6 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 175663 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 23 gaggaagaagggagcaggggaagaggagg 51 |||||||||||||||| |||| ||||||| Sbjct: 78088 gaggaagaagggagcacgggaggaggagg 78060
>gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, complete sequence Length = 166914 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gcaggggaagaggaggcagaa 56 ||||||||||||||||||||| Sbjct: 98050 gcaggggaagaggaggcagaa 98070
>dbj|AP002815.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-939C17 Length = 174484 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 agggagcaggggaagaggagg 51 ||||||||||||||||||||| Sbjct: 92025 agggagcaggggaagaggagg 92005
>gb|AC166652.6| Mus musculus chromosome 8, clone RP24-129F24, complete sequence Length = 164098 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 cttcgcggaggggagcgaggaggc 259 ||||| |||||||||||||||||| Sbjct: 134392 cttcggggaggggagcgaggaggc 134415
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gctcccaagaacaaggtgaa 190 |||||||||||||||||||| Sbjct: 132145 gctcccaagaacaaggtgaa 132126
>gb|AC165224.9| Mus musculus chromosome 5, clone RP24-389L10, complete sequence Length = 155046 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 ggaagaagggagcaggggaagagg 48 |||||||||||| ||||||||||| Sbjct: 18884 ggaagaagggagaaggggaagagg 18861
>ref|XM_512669.1| PREDICTED: Pan troglodytes similar to latent transforming growth factor beta binding protein 4 (LOC456042), mRNA Length = 2112 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ctgtctgccccagtcccagc 120 |||||||||||||||||||| Sbjct: 2036 ctgtctgccccagtcccagc 2055
>ref|NM_004745.3| Homo sapiens discs, large (Drosophila) homolog-associated protein 2 (DLGAP2), mRNA Length = 10101 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgtccaaggcggaggagctc 347 |||||||||||||||||||| Sbjct: 1965 tgtccaaggcggaggagctc 1984
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gctcccaagaacaaggtgaa 190 |||||||||||||||||||| Sbjct: 137208 gctcccaagaacaaggtgaa 137227
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 catcgctgtcgctgccgctg 476 |||||||||||||||||||| Sbjct: 7716 catcgctgtcgctgccgctg 7697
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ccaaggcggaggagctcggc 350 |||||||||||||||||||| Sbjct: 1518564 ccaaggcggaggagctcggc 1518583
>ref|XM_870197.1| PREDICTED: Bos taurus hypothetical protein LOC617871 (LOC617871), mRNA Length = 2508 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 tcgctgtcgctgccgctgct 478 |||||||||||||||||||| Sbjct: 761 tcgctgtcgctgccgctgct 742
>gb|BT014101.1| Lycopersicon esculentum clone 133205F, mRNA sequence Length = 801 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 164 ggccatggctcccaagaacaaggtgaacaagt 195 |||||||||||| || || ||||||||||||| Sbjct: 147 ggccatggctcctaaaaagaaggtgaacaagt 178
>ref|NM_025106.2| Homo sapiens splA/ryanodine receptor domain and SOCS box containing 1 (SPSB1), mRNA Length = 3081 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ctgctctccaaggccgagga 400 |||||||||||||||||||| Sbjct: 116 ctgctctccaaggccgagga 97
>gb|BC015711.1| Homo sapiens splA/ryanodine receptor domain and SOCS box containing 1, mRNA (cDNA clone MGC:16798 IMAGE:3916157), complete cds Length = 3081 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ctgctctccaaggccgagga 400 |||||||||||||||||||| Sbjct: 116 ctgctctccaaggccgagga 97
>gb|AC152493.3| Rhinolophus ferrumequinum clone VMRC7-244O22, complete sequence Length = 75463 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 agaggaagaagggagcaggggaag 45 |||||| ||||||||||||||||| Sbjct: 48886 agaggacgaagggagcaggggaag 48909
>gb|AC146188.3| Pan troglodytes BAC clone RP43-35J3 from 7, complete sequence Length = 161143 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctgctcttcgtcctgtctgc 108 |||||||||||||||||||| Sbjct: 6573 ctgctcttcgtcctgtctgc 6592
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 gaagctggagaagcgcaagg 297 |||||||||||||||||||| Sbjct: 128524 gaagctggagaagcgcaagg 128505
>gb|AC124444.4| Mus musculus BAC clone RP24-185P7 from chromosome 7, complete sequence Length = 184996 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 gtggttcggcgcggggatcttcgc 241 |||||||||||||||| ||||||| Sbjct: 136127 gtggttcggcgcggggctcttcgc 136150
>gb|AC140185.3| Mus musculus BAC clone RP24-363A3 from chromosome 5, complete sequence Length = 169091 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ggggaagaggaggcagaaat 58 |||||||||||||||||||| Sbjct: 158711 ggggaagaggaggcagaaat 158692
>gb|AC126333.7| Homo sapiens chromosome 8, clone RP11-666I19, complete sequence Length = 127374 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tgtccaaggcggaggagctc 347 |||||||||||||||||||| Sbjct: 40807 tgtccaaggcggaggagctc 40788
>gb|AC129015.4| Mus musculus BAC clone RP24-364A8 from chromosome 5, complete sequence Length = 165259 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 agcaggggaagaggaggcag 54 |||||||||||||||||||| Sbjct: 27338 agcaggggaagaggaggcag 27319
>gb|AC131729.3| Mus musculus BAC clone RP23-125B15 from 5, complete sequence Length = 209715 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ggggaagaggaggcagaaat 58 |||||||||||||||||||| Sbjct: 35669 ggggaagaggaggcagaaat 35650
>gb|AC183752.3| Rhinolophus ferrumequinum clone VMRC7-380K18, complete sequence Length = 39225 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 agaggaagaagggagcaggggaag 45 |||||| ||||||||||||||||| Sbjct: 5105 agaggacgaagggagcaggggaag 5128
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 gtggttcggcgcggggatcttcgc 241 |||||||||||||||| ||||||| Sbjct: 216549 gtggttcggcgcggggctcttcgc 216526
>gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, complete sequence Length = 164190 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 654 gtttgttttgtagtaggata 673 |||||||||||||||||||| Sbjct: 98476 gtttgttttgtagtaggata 98457
>gb|AC092688.3| Homo sapiens BAC clone RP11-803A21 from 7, complete sequence Length = 53249 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gtgttcaagaagctggagaa 289 |||||||||||||||||||| Sbjct: 18967 gtgttcaagaagctggagaa 18986
>gb|AC006356.3| Homo sapiens PAC clone RP5-1111L2 from 7, complete sequence Length = 153206 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ctgctcttcgtcctgtctgc 108 |||||||||||||||||||| Sbjct: 29163 ctgctcttcgtcctgtctgc 29182
>gb|AC102016.4| Mus musculus chromosome 5, clone RP24-567O8, complete sequence Length = 154115 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 agaagggagcaggggaagag 47 |||||||||||||||||||| Sbjct: 61108 agaagggagcaggggaagag 61089
>gb|AC142295.1| Pan troglodytes BAC clone RP43-80F20 from 7, complete sequence Length = 165071 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gtgttcaagaagctggagaa 289 |||||||||||||||||||| Sbjct: 102523 gtgttcaagaagctggagaa 102542
>emb|CR759903.8| Zebrafish DNA sequence from clone CH211-138E6 in linkage group 9, complete sequence Length = 168689 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 648 gtatatgtttgttttgtagt 667 |||||||||||||||||||| Sbjct: 97529 gtatatgtttgttttgtagt 97510
>gb|AC137823.45| Medicago truncatula clone mth2-14c17, complete sequence Length = 135139 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 643 atggagtatatgtttgtttt 662 |||||||||||||||||||| Sbjct: 104913 atggagtatatgtttgtttt 104894
>gb|AF188030.5| Homo sapiens chromosome 8 clone RP4-593A12 map p23, complete sequence Length = 151329 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgtccaaggcggaggagctc 347 |||||||||||||||||||| Sbjct: 75415 tgtccaaggcggaggagctc 75434
>gb|AF181898.6| Homo sapiens chromosome 8 clone GS1-402E12 map p23, complete sequence Length = 261151 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgtccaaggcggaggagctc 347 |||||||||||||||||||| Sbjct: 243798 tgtccaaggcggaggagctc 243817
>gb|AC129292.4| Mus musculus chromosome 5 clone RP24-507A8, complete sequence Length = 186200 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 agcaggggaagaggaggcag 54 |||||||||||||||||||| Sbjct: 71278 agcaggggaagaggaggcag 71297
>emb|AL008734.10|HS324M8 Human DNA sequence from clone RP3-324M8 on chromosome 1p36.2-36.3 Contains the 5' end of the gene for a novel SPRY domain containing protein and a CpG island, complete sequence Length = 85116 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ctgctctccaaggccgagga 400 |||||||||||||||||||| Sbjct: 73595 ctgctctccaaggccgagga 73614
>ref|XM_963055.1| PREDICTED: Tribolium castaneum similar to CG32067-PC, isoform C (LOC656529), mRNA Length = 1755 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 ttcggcgcggggatcttcgcggag 245 |||||||||| ||||||||||||| Sbjct: 375 ttcggcgcggagatcttcgcggag 352
>ref|XM_966193.1| PREDICTED: Tribolium castaneum similar to Mothers against dpp protein (LOC659927), mRNA Length = 1805 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 tcaagaagctggagaagcgcaagg 297 ||||||||||| |||||||||||| Sbjct: 197 tcaagaagctgaagaagcgcaagg 220
>ref|XM_965940.1| PREDICTED: Tribolium castaneum similar to Mothers against dpp protein (LOC659654), mRNA Length = 1808 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 tcaagaagctggagaagcgcaagg 297 ||||||||||| |||||||||||| Sbjct: 197 tcaagaagctgaagaagcgcaagg 220
>emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chromosome 11 Contains the gene for a novel protein similar to smoothelin Smtn, three novel genes, the Mybbp1a gene for MYB binding protein (P160) 1a, a ribosomal protein 7a (Rpl7a) pseudogene, the 5' end of the Ube2g1 gene for ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) and four CpG islands, complete sequence Length = 258521 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 aagaagggagcaggggaagaggag 50 |||||||||| ||||||||||||| Sbjct: 127850 aagaagggaggaggggaagaggag 127873
>emb|AL627284.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 20/20 Length = 88037 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gcagccacagtgtccccggc 448 |||||||||||||||||||| Sbjct: 32702 gcagccacagtgtccccggc 32721
>gb|AY271631.1| Amycolatopsis lactamdurans isolate AAL17 putative NRPS gene, partial cds Length = 684 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 ctgctctccaaggccgaggacctg 404 ||||||||||||| |||||||||| Sbjct: 84 ctgctctccaaggtcgaggacctg 107
>gb|AF119818.1| Homo sapiens discs, large (Drosophila) homolog-associated protein 2 (DLGAP2) mRNA, alternatively spliced, partial cds Length = 10141 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgtccaaggcggaggagctc 347 |||||||||||||||||||| Sbjct: 2002 tgtccaaggcggaggagctc 2021
>gb|AF119817.1| Homo sapiens discs, large (Drosophila) homolog-associated protein 2 (DLGAP2) mRNA, alternatively spliced, complete cds Length = 10126 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgtccaaggcggaggagctc 347 |||||||||||||||||||| Sbjct: 1987 tgtccaaggcggaggagctc 2006
>gb|AY056828.1| Oryza sativa beta-glucosidase isozyme 2 precursor, mRNA, complete cds Length = 1797 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gctcccaagaacaaggtgaa 190 |||||||||||||||||||| Sbjct: 62 gctcccaagaacaaggtgaa 43
>emb|CR609804.1| full-length cDNA clone CS0DI075YP10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 3039 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ctgctctccaaggccgagga 400 |||||||||||||||||||| Sbjct: 148 ctgctctccaaggccgagga 129
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ttcaaggtcacggccatggc 172 |||||||||||||||||||| Sbjct: 864869 ttcaaggtcacggccatggc 864888
>gb|AC021205.6| Homo sapiens BAC clone RP11-170N16 from 4, complete sequence Length = 178917 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcaggggaagaggaggcaga 55 |||||||||||||||||||| Sbjct: 20211 gcaggggaagaggaggcaga 20230
>gb|AF009204.1|AF009204 Homo sapiens PSD-95/SAP90-associated protein-2 mRNA, partial cds Length = 3412 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgtccaaggcggaggagctc 347 |||||||||||||||||||| Sbjct: 1815 tgtccaaggcggaggagctc 1834
>gb|AC151523.4| Medicago truncatula chromosome 7 BAC clone mth2-166j21, complete sequence Length = 123340 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 643 atggagtatatgtttgtttt 662 |||||||||||||||||||| Sbjct: 114797 atggagtatatgtttgtttt 114816
>gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, complete sequence Length = 87338 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 gctgtcgctgccgctgctcg 480 |||||||||||||||||||| Sbjct: 66279 gctgtcgctgccgctgctcg 66298
>ref|XM_571720.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 2035 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 catcgctgtcgctgccgctg 476 |||||||||||||||||||| Sbjct: 1904 catcgctgtcgctgccgctg 1885
>ref|XM_571719.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 2068 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 catcgctgtcgctgccgctg 476 |||||||||||||||||||| Sbjct: 1937 catcgctgtcgctgccgctg 1918
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gctcccaagaacaaggtgaa 190 |||||||||||||||||||| Sbjct: 18739356 gctcccaagaacaaggtgaa 18739375
>emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013A04, complete sequence Length = 188209 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gagcgaggaggcgtcggtgg 267 |||||||||||||||||||| Sbjct: 92043 gagcgaggaggcgtcggtgg 92062
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 agaggaagaagggagcaggggaag 45 |||||| ||||||||||||||||| Sbjct: 852194 agaggacgaagggagcaggggaag 852217
>gb|AC010412.9| Homo sapiens chromosome 19 clone CTD-2166J9, complete sequence Length = 155085 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 ctgtctgccccagtcccagc 120 |||||||||||||||||||| Sbjct: 31181 ctgtctgccccagtcccagc 31200
>gb|AC157217.2| Pan troglodytes BAC clone CH251-305B5 from chromosome unknown, complete sequence Length = 159245 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcaggggaagaggaggcaga 55 |||||||||||||||||||| Sbjct: 144308 gcaggggaagaggaggcaga 144289
>emb|AL954845.21| Zebrafish DNA sequence from clone DKEY-30H3, complete sequence Length = 226343 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 648 gtatatgtttgttttgtagt 667 |||||||||||||||||||| Sbjct: 168103 gtatatgtttgttttgtagt 168084
>gb|AC009803.17| Homo sapiens 12 BAC RP11-1028N23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186044 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tcctgtctgccccagtccca 118 |||||||||||||||||||| Sbjct: 49074 tcctgtctgccccagtccca 49055
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gcagccacagtgtccccggc 448 |||||||||||||||||||| Sbjct: 4529709 gcagccacagtgtccccggc 4529728
>emb|AJ234696.1|HVU234696 Hordeum vulgare genomic DNA fragment; clone MWG0980.rev Length = 464 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gcaaggtgctgagcaccgtc 311 |||||||||||||||||||| Sbjct: 443 gcaaggtgctgagcaccgtc 462
>dbj|AK026046.1| Homo sapiens cDNA: FLJ22393 fis, clone HRC07880 Length = 1648 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ctgctctccaaggccgagga 400 |||||||||||||||||||| Sbjct: 162 ctgctctccaaggccgagga 143
>dbj|AK066710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074A20, full insert sequence Length = 1811 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gctcccaagaacaaggtgaa 190 |||||||||||||||||||| Sbjct: 90 gctcccaagaacaaggtgaa 71
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gcagccacagtgtccccggc 448 |||||||||||||||||||| Sbjct: 4736626 gcagccacagtgtccccggc 4736645
>dbj|AP002774.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-630P1, complete sequences Length = 143590 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 aagggagcaggggaagagga 49 |||||||||||||||||||| Sbjct: 11849 aagggagcaggggaagagga 11868
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 463 tgtcgctgccgctgctcgtcgcct 486 |||||||||||||||||| ||||| Sbjct: 4554162 tgtcgctgccgctgctcgccgcct 4554185
>gb|U87679.1|HGU87679 Hepatitis G virus isolate E3 envelope protein 2 (E2) gene, partial cds Length = 400 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gagagcgcagccacagtgtc 442 |||||||||||||||||||| Sbjct: 380 gagagcgcagccacagtgtc 361
>dbj|AB209559.1| Homo sapiens mRNA for SPRY domain-containing SOCS box protein SSB-1 variant protein Length = 1231 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 ctgctctccaaggccgagga 400 |||||||||||||||||||| Sbjct: 121 ctgctctccaaggccgagga 102
>gb|AC162033.11| Mus musculus chromosome 8, clone RP23-162M13, complete sequence Length = 217343 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 cttcgcggaggggagcgaggaggc 259 ||||| |||||||||||||||||| Sbjct: 149566 cttcggggaggggagcgaggaggc 149543
>dbj|AB000275.1| Homo sapiens mRNA for DAP-2, partial cds Length = 1740 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 tgtccaaggcggaggagctc 347 |||||||||||||||||||| Sbjct: 557 tgtccaaggcggaggagctc 576
>emb|AL671904.8| Mouse DNA sequence from clone RP23-243J2 on chromosome X, complete sequence Length = 132834 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 agggagcaggggaagaggag 50 |||||||||||||||||||| Sbjct: 41428 agggagcaggggaagaggag 41447
>emb|AL591366.15| Mouse DNA sequence from clone RP23-80N1 on chromosome 11, complete sequence Length = 117612 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 agaggaagaagggagcaggggaag 45 |||| ||||||||||||||||||| Sbjct: 66574 agagcaagaagggagcaggggaag 66551 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,449,633 Number of Sequences: 3902068 Number of extensions: 5449633 Number of successful extensions: 132100 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131178 Number of HSP's gapped (non-prelim): 916 length of query: 681 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 658 effective length of database: 17,143,297,704 effective search space: 11280289889232 effective search space used: 11280289889232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)