ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal35c04 |
|---|---|
| Clone Library Name | barley_pub |
>AMYA_VIGMU (P17859) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 421 Score = 203 bits (516), Expect = 3e-52 Identities = 103/185 (55%), Positives = 130/185 (70%), Gaps = 2/185 (1%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGI 189 K YME T+P FAVGE WDS+SY G+ +YNQD+HR +V+W+ + G AFD TTKGI Sbjct: 212 KIYMEQTKPDFAVGEKWDSISYGQDGKPNYNQDSHRGALVNWVESAGGAITAFDFTTKGI 271 Query: 190 LHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVY 369 L A++ E WRL D G PPG++G P AVTFI+NHDTGSTQ W FP MQGY Y Sbjct: 272 LQAAVQ-GELWRLIDPNGKPPGMIGVKPENAVTFIDNHDTGSTQRLWPFPSDKVMQGYAY 330 Query: 370 ILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENL 546 ILTHPGTP++FYDH F L++ IAKL SIR R I +S +KI+ +E +LY A+I+ + Sbjct: 331 ILTHPGTPSIFYDHFFDWGLKEQIAKLSSIRLRNGINEKSTVKIMASEGDLYVAKIDNKI 390 Query: 547 MMKIG 561 M+KIG Sbjct: 391 MVKIG 395
>AMC2_ORYSA (P27941) Alpha-amylase isozyme C2 precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 445 Score = 203 bits (516), Expect = 3e-52 Identities = 100/190 (52%), Positives = 133/190 (70%), Gaps = 6/190 (3%) Frame = +1 Query: 13 KDYMEATEPY-FAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATNGTAGA---FDVT 177 K Y+E T P AV E WDS++Y G+ +YNQDAHRQ +VDW++ GTA A FD T Sbjct: 213 KVYIEGTTPVGLAVAELWDSMAYGGDGKPEYNQDAHRQALVDWVDRVGGTASAGMVFDFT 272 Query: 178 TKGILHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQ 357 TKGI++ A+E E WRL D++G PGV+GWWP++AVTF++NHDTGSTQ W FP MQ Sbjct: 273 TKGIMNTAVE-GELWRLIDQQGKAPGVIGWWPAKAVTFVDNHDTGSTQQMWPFPSDKVMQ 331 Query: 358 GYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQI 534 GY YILTHPG P +FYDH F L++ IA L+++RQR + S +KI+ + + Y A+I Sbjct: 332 GYAYILTHPGNPCIFYDHFFDWGLKEQIAALVAVRQRNGVTATSSLKIMLHDADAYVAEI 391 Query: 535 NENLMMKIGS 564 + ++MKIGS Sbjct: 392 DGKVVMKIGS 401
>AM2A_ORYSA (P27935) Alpha-amylase isozyme 2A precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 445 Score = 203 bits (516), Expect = 3e-52 Identities = 100/190 (52%), Positives = 133/190 (70%), Gaps = 6/190 (3%) Frame = +1 Query: 13 KDYMEATEPY-FAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATNGTAGA---FDVT 177 K Y+E T P AV E WDS++Y G+ +YNQDAHRQ +VDW++ GTA A FD T Sbjct: 213 KVYIEGTTPVGLAVAELWDSMAYGGDGKPEYNQDAHRQALVDWVDRVGGTASAGMVFDFT 272 Query: 178 TKGILHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQ 357 TKGI++ A+E E WRL D++G PGV+GWWP++AVTF++NHDTGSTQ W FP MQ Sbjct: 273 TKGIMNTAVE-GELWRLIDQQGKAPGVIGWWPAKAVTFVDNHDTGSTQQMWPFPSDKVMQ 331 Query: 358 GYVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQI 534 GY YILTHPG P +FYDH F L++ IA L+++RQR + S +KI+ + + Y A+I Sbjct: 332 GYAYILTHPGNPCIFYDHFFDWGLKEQIAALVAVRQRNGVTATSSLKIMLHDADAYVAEI 391 Query: 535 NENLMMKIGS 564 + ++MKIGS Sbjct: 392 DGKVVMKIGS 401
>AMY6_HORVU (P04750) Alpha-amylase type B isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clones GRAMY56 and 963) Length = 429 Score = 199 bits (505), Expect = 7e-51 Identities = 99/199 (49%), Positives = 135/199 (67%), Gaps = 8/199 (4%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATNGTAGA--FDVTTK 183 K Y++ +EP FAV E W SL+Y G+ + NQD HRQ +V+W+N G+ A FD TTK Sbjct: 216 KIYVDRSEPSFAVAEIWTSLAYGGDGKPNLNQDPHRQELVNWVNKVGGSGPATTFDFTTK 275 Query: 184 GILHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGY 363 GIL++A+E E WRL G PG++GWWP++AVTF++NHDTGSTQ W FP MQGY Sbjct: 276 GILNVAVE-GELWRLRGTDGKAPGMIGWWPAKAVTFVDNHDTGSTQHMWPFPSDRVMQGY 334 Query: 364 VYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINE 540 YILTHPG P +FYDH F L+++I +L+SIR R I SK++I++A+ +LY A+I Sbjct: 335 AYILTHPGNPCIFYDHFFDWGLKEEIDRLVSIRTRQGIHSESKLQIMEADADLYLAEIEG 394 Query: 541 NLMMKIGS----GHFEPSG 585 +++K+G GH P G Sbjct: 395 KVIVKLGPRYDVGHLIPEG 413
>AMY2_HORVU (P04063) Alpha-amylase type B isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (AMY2-2) (High pI alpha-amylase) Length = 427 Score = 195 bits (496), Expect = 7e-50 Identities = 98/199 (49%), Positives = 136/199 (68%), Gaps = 8/199 (4%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATNGTAGA--FDVTTK 183 K Y++ +EP FAV E W SL+Y G+ + NQD HRQ +V+W++ G A FD TTK Sbjct: 214 KIYIDRSEPSFAVAEIWTSLAYGGDGKPNLNQDQHRQELVNWVDKVGGKGPATTFDFTTK 273 Query: 184 GILHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGY 363 GIL++A+E E WRL G PG++GWWP++AVTF++NHDTGSTQ W FP MQGY Sbjct: 274 GILNVAVE-GELWRLRGTDGKAPGMIGWWPAKAVTFVDNHDTGSTQHMWPFPSDRVMQGY 332 Query: 364 VYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINE 540 YILTHPGTP +FYDH F L+++I +L+S+R R I SK++II+A+ +LY A+I+ Sbjct: 333 AYILTHPGTPCIFYDHFFDWGLKEEIDRLVSVRTRHGIHNESKLQIIEADADLYLAEIDG 392 Query: 541 NLMMKIGS----GHFEPSG 585 +++K+G G+ P G Sbjct: 393 KVIVKLGPRYDVGNLIPGG 411
>AMY1_ORYSA (P17654) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 434 Score = 195 bits (495), Expect = 9e-50 Identities = 95/188 (50%), Positives = 133/188 (70%), Gaps = 5/188 (2%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWIN---ATNGTAGAFDVTT 180 K Y++ATEP FAV E W S++ G+ +Y+Q+AHRQ +V+W++ N A AFD TT Sbjct: 220 KIYIDATEPSFAVAEIWTSMANGGDGKPNYDQNAHRQELVNWVDRVGGANSNATAFDFTT 279 Query: 181 KGILHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQG 360 KGIL++A+E E WRL E G PG++GWWP++A TF++NHDTGSTQ W FP MQG Sbjct: 280 KGILNVAVE-GELWRLRGEDGKAPGMIGWWPAKATTFVDNHDTGSTQHLWPFPSDKVMQG 338 Query: 361 YVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQIN 537 Y YILTHPG P +FYDH F L+++I +L+SIR R I S+++I++A+ +LY A+I+ Sbjct: 339 YAYILTHPGNPCIFYDHFFDWGLKEEIERLVSIRNRQGIHPASELRIMEADSDLYLAEID 398 Query: 538 ENLMMKIG 561 ++ KIG Sbjct: 399 GKVITKIG 406
>AM3B_ORYSA (P27937) Alpha-amylase isozyme 3B precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 438 Score = 193 bits (491), Expect = 3e-49 Identities = 92/186 (49%), Positives = 125/186 (67%), Gaps = 2/186 (1%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYT-YGEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGI 189 K Y++ T+P F V E W ++ Y GE +NQD RQ +V+W A G A AFD TTKG Sbjct: 216 KTYVDNTDPSFVVAEIWSNMRYDGNGEPSWNQDGDRQELVNWAQAVGGPASAFDFTTKGE 275 Query: 190 LHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVY 369 L A++ E WR+ D G PG++GW P +AVTFI+NHDTGSTQ W FP MQGY Y Sbjct: 276 LQAAVQ-GELWRMKDGNGKAPGMIGWLPEKAVTFIDNHDTGSTQNSWPFPSDKVMQGYAY 334 Query: 370 ILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENL 546 ILTHPG P +FYDH+F +L+Q+I+ L ++R R +I SK+KI+ AE ++Y A I++ + Sbjct: 335 ILTHPGVPCIFYDHVFDWNLKQEISTLAAVRSRNEIHPGSKLKILAAEGDVYVAMIDDKV 394 Query: 547 MMKIGS 564 + KIG+ Sbjct: 395 ITKIGT 400
>AMY1_HORVU (P00693) Alpha-amylase type A isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (AMY1) (Low pI alpha-amylase) Length = 438 Score = 191 bits (486), Expect = 1e-48 Identities = 94/189 (49%), Positives = 128/189 (67%), Gaps = 5/189 (2%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATNGTAGA---FDVTT 180 K Y++ T P AV E WD+++ G+ +Y+QDAHRQ +V+W++ G A A FD TT Sbjct: 215 KVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAASAGMVFDFTT 274 Query: 181 KGILHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQG 360 KGIL+ A+E E WRL D +G PGV+GWWP++A TF++NHDTGSTQ W FP MQG Sbjct: 275 KGILNAAVE-GELWRLIDPQGKAPGVMGWWPAKAATFVDNHDTGSTQAMWPFPSDKVMQG 333 Query: 361 YVYILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQIN 537 Y YILTHPG P +FYDH F+ + IA L++IR+R I S +KI+ E + Y A+I+ Sbjct: 334 YAYILTHPGIPCIFYDHFFNWGFKDQIAALVAIRKRNGITATSALKILMHEGDAYVAEID 393 Query: 538 ENLMMKIGS 564 +++KIGS Sbjct: 394 GKVVVKIGS 402
>AM3C_ORYSA (P27939) Alpha-amylase isozyme 3C precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 437 Score = 189 bits (480), Expect = 5e-48 Identities = 90/186 (48%), Positives = 123/186 (66%), Gaps = 2/186 (1%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYT-YGEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGI 189 K Y++ T+P F V E W ++ Y GE +NQD RQ +V+W A G A AFD TTKG Sbjct: 216 KTYVDNTDPSFVVAEIWSNMRYDGNGEPSWNQDGDRQELVNWAQAVGGPASAFDFTTKGE 275 Query: 190 LHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVY 369 L A++ E WR+ D G PG++GW P +AVTFI+NHDTGSTQ W FP MQGY Y Sbjct: 276 LQAAVQ-GELWRMKDGNGKAPGMIGWLPEKAVTFIDNHDTGSTQNSWPFPSDKVMQGYAY 334 Query: 370 ILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENL 546 ILTHPG P +FYDH+F +L+Q+I+ L ++R R I SK+ I+ A+ ++Y A I++ + Sbjct: 335 ILTHPGVPCIFYDHVFDWNLKQEISTLAAVRSRNGIHPGSKLNILAADGDVYVAMIDDKV 394 Query: 547 MMKIGS 564 + KIG+ Sbjct: 395 ITKIGT 400
>AM3D_ORYSA (P27933) Alpha-amylase isozyme 3D precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 436 Score = 188 bits (477), Expect = 1e-47 Identities = 92/186 (49%), Positives = 125/186 (67%), Gaps = 2/186 (1%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGI 189 K Y+E+ +P F V E W+SLSY G+ NQD RQ +V+W+NA G A FD TTKG+ Sbjct: 215 KMYVESCKPGFVVAEIWNSLSYNGDGKPAANQDQGRQELVNWVNAVGGPAMTFDFTTKGL 274 Query: 190 LHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVY 369 L ++ E WRL D G G++GW P +AVTF++NHDTGSTQ W FP MQGY Y Sbjct: 275 LQAGVQ-GELWRLRDGNGKAAGMIGWLPEKAVTFVDNHDTGSTQKLWPFPSDKVMQGYAY 333 Query: 370 ILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENL 546 ILTHPG P +FYDH+F +L+Q+I L +IR+R I SK++I+ A+ + Y A ++E + Sbjct: 334 ILTHPGVPCIFYDHMFDWNLKQEITALAAIRERNGINAGSKLRIVVADADAYVAVVDEKV 393 Query: 547 MMKIGS 564 M+KIG+ Sbjct: 394 MVKIGT 399
>AM3E_ORYSA (P27934) Alpha-amylase isozyme 3E precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 437 Score = 188 bits (477), Expect = 1e-47 Identities = 93/183 (50%), Positives = 118/183 (64%), Gaps = 2/183 (1%) Frame = +1 Query: 19 YMEATEPYFAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGILH 195 Y++ T P F VGE W SL Y G+ NQDA RQ +V+W+ A AFD TTKGIL Sbjct: 217 YVDNTNPTFVVGEIWSSLIYNGDGKPSTNQDADRQELVNWVEGVGKPATAFDFTTKGILQ 276 Query: 196 MALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYIL 375 A++ E WRL D G PG++GW P +AVTF++NHDTGSTQ W FP MQGY YIL Sbjct: 277 AAVQ-GELWRLHDGNGKAPGLMGWMPDQAVTFVDNHDTGSTQSLWPFPSDKVMQGYAYIL 335 Query: 376 THPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMM 552 THPG P +FYDH+F +LQ +IA L IR R I S + I+KAE ++Y A I+ ++ Sbjct: 336 THPGIPCIFYDHVFDWNLQHEIATLAEIRSRNGIHAESTLDILKAEGDIYVAMIDGKVIT 395 Query: 553 KIG 561 K+G Sbjct: 396 KLG 398
>AM3A_ORYSA (P27932) Alpha-amylase isozyme 3A precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 440 Score = 185 bits (470), Expect = 8e-47 Identities = 87/185 (47%), Positives = 123/185 (66%), Gaps = 2/185 (1%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGI 189 + Y++ P F V E W+SLSY G+ NQD RQ +V+W+ G A AFD TTKGI Sbjct: 218 RTYVQNARPSFVVAEIWNSLSYDGDGKPAANQDGQRQELVNWVKQVGGPATAFDFTTKGI 277 Query: 190 LHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVY 369 L A++ E WR+ D+ G PG++GW+P +AVTF++NHDTGSTQ W FP + GY Y Sbjct: 278 LQSAVQ-GELWRMRDKDGKAPGMIGWYPEKAVTFVDNHDTGSTQRMWPFPSDKVILGYAY 336 Query: 370 ILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENL 546 ILTHPG P +FYDH+F +L+Q+I L + R+R I SK++++ AE ++Y A ++E + Sbjct: 337 ILTHPGVPCIFYDHVFDWNLKQEINALAATRKRNGINAGSKLRVLAAESDMYVAMVDERV 396 Query: 547 MMKIG 561 + KIG Sbjct: 397 ITKIG 401
>AMY3_HORVU (P04747) Alpha-amylase type B isozyme precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clone PHV19) (Fragment) Length = 368 Score = 171 bits (433), Expect = 1e-42 Identities = 82/153 (53%), Positives = 108/153 (70%), Gaps = 4/153 (2%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYTY-GEMDYNQDAHRQRIVDWINATNGTAGA--FDVTTK 183 K Y++ +EP FAV E W SL+Y G+ + NQD HRQ +V+W++ G A FD TTK Sbjct: 214 KIYIDRSEPSFAVAEIWTSLAYGGDGKPNLNQDQHRQELVNWVDKVGGKGPATTFDFTTK 273 Query: 184 GILHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGY 363 GIL++A+E E WRL G PG++GWWP++AVTF++NHDTGSTQ W FP MQGY Sbjct: 274 GILNVAVE-GELWRLRGTDGKAPGMIGWWPAKAVTFVDNHDTGSTQHMWPFPSDRVMQGY 332 Query: 364 VYILTHPGTPAVFYDHIFS-HLQQDIAKLISIR 459 YILTHPGTP +FYDH F L+++I +L+S+R Sbjct: 333 AYILTHPGTPCIFYDHFFDWGLKEEIDRLVSVR 365
>AMY3_WHEAT (P08117) Alpha-amylase AMY3 precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 413 Score = 154 bits (389), Expect = 2e-37 Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 1/185 (0%) Frame = +1 Query: 13 KDYMEATEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGIL 192 K Y++ ++P F VGE +D RQ + +W+ G A AFD TKG+L Sbjct: 214 KIYVDNSKPAFVVGELYDR--------------DRQLLANWVRGVGGPATAFDFPTKGVL 259 Query: 193 HMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYI 372 A++ + R+ G PG++GW P + VTFI+NHDTGSTQ W FP MQGY YI Sbjct: 260 QEAVQ-GDLGRMRGSDGKAPGMIGWMPEKTVTFIDNHDTGSTQRLWPFPSDKVMQGYAYI 318 Query: 373 LTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLM 549 LTHPG P +FYDH+F L+Q+I L ++R R I S + I+KAE +LY A+I ++ Sbjct: 319 LTHPGIPCIFYDHVFDWKLKQEITALATVRSRNGIHPGSTLDILKAEGDLYVAKIGGKVI 378 Query: 550 MKIGS 564 KIGS Sbjct: 379 TKIGS 383
>AMY4_HORVU (P04748) Alpha-amylase type B isozyme (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clone 103) (Fragment) Length = 153 Score = 133 bits (334), Expect = 4e-31 Identities = 65/138 (47%), Positives = 94/138 (68%), Gaps = 5/138 (3%) Frame = +1 Query: 187 ILHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYV 366 IL++A+E + WRL G P ++GWWP++AVTF++NHDTGSTQ W FP MQGY Sbjct: 1 ILNVAVEGA-LWRLRGTDGKAPSMIGWWPAKAVTFVDNHDTGSTQHMWPFPSDRVMQGYA 59 Query: 367 YILTHPGTPAVFYDHIFS-HLQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINEN 543 YILTHP TP +FYDH F +++I +L+S+R R I SK++II+A+ +LY A+I+ Sbjct: 60 YILTHPRTPCIFYDHFFDWGPKEEIDRLVSVRTRHGIHNESKLQIIEADADLYLAEIDGK 119 Query: 544 LMMKIGS----GHFEPSG 585 +++K+G G+ P G Sbjct: 120 VIVKLGPRYDVGNLIPGG 137
>AMY5_HORVU (P04749) Alpha-amylase type B isozyme (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) (Clone 168) (Fragment) Length = 135 Score = 119 bits (298), Expect = 7e-27 Identities = 56/117 (47%), Positives = 80/117 (68%), Gaps = 5/117 (4%) Frame = +1 Query: 250 PGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTPAVFYDHIFS-HL 426 PG++GWWP++AVTF+ NHDTGSTQ W FP MQGY YILTH GTP +FYDH F Sbjct: 3 PGMIGWWPAKAVTFVNNHDTGSTQHMWPFPSDRVMQGYAYILTHQGTPCIFYDHFFDWGP 62 Query: 427 QQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQINENLMMKIGS----GHFEPSG 585 +++I +L+S+ R I SK++II+A+ +L A+I+ +++K+G G+ P G Sbjct: 63 KEEIDRLVSVSTRHGIHSESKLQIIEADADLCLAEIDGKVIVKLGPRYDVGNLIPGG 119
>AMT4_PSEST (P13507) Glucan 1,4-alpha-maltotetraohydrolase precursor (EC| 3.2.1.60) (G4-amylase) (Maltotetraose-forming amylase) (Exo-maltotetraohydrolase) (Maltotetraose-forming exo-amylase) Length = 548 Score = 76.3 bits (186), Expect = 6e-14 Identities = 58/179 (32%), Positives = 81/179 (45%), Gaps = 12/179 (6%) Frame = +1 Query: 25 EATEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIV-DWINATNGTAGAFDVTTKGILHMA 201 ++ + F VGE W S Y D+ A Q+I+ DW + FD K Sbjct: 230 DSADNSFCVGELWKGPS-EYPNWDWRNTASWQQIIKDW--SDRAKCPVFDFALK------ 280 Query: 202 LERSEYWRLSDEK----GNPPGVLGWWPSRAVTFIENHDTGSTQG------HWRFPYGME 351 ER + ++D K GNP W AVTF++NHDTG + G HW G+ Sbjct: 281 -ERMQNGSIADWKHGLNGNPDPR---WREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLI 336 Query: 352 MQGYVYILTHPGTPAVFYDHIFSHLQQD-IAKLISIRQRLKIQCRSKIKIIKAEQNLYA 525 Q Y YILT PGTP V++ H++ D I +LI +R+ ++ S I L A Sbjct: 337 RQAYAYILTSPGTPVVYWSHMYDWGYGDFIRQLIQVRRAAGVRADSAISFHSGYSGLVA 395
>AMT4_PSESA (P22963) Glucan 1,4-alpha-maltotetraohydrolase precursor (EC| 3.2.1.60) (G4-amylase) (Maltotetraose-forming amylase) (Exo-maltotetraohydrolase) (Maltotetraose-forming exo-amylase) Length = 551 Score = 76.3 bits (186), Expect = 6e-14 Identities = 58/179 (32%), Positives = 81/179 (45%), Gaps = 12/179 (6%) Frame = +1 Query: 25 EATEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIV-DWINATNGTAGAFDVTTKGILHMA 201 ++ + F VGE W S Y D+ A Q+I+ DW + FD K Sbjct: 230 DSADSSFCVGELWKGPS-EYPSWDWRNTASWQQIIKDW--SDRAKCPVFDFALK------ 280 Query: 202 LERSEYWRLSDEK----GNPPGVLGWWPSRAVTFIENHDTGSTQG------HWRFPYGME 351 ER + ++D K GNP W AVTF++NHDTG + G HW G+ Sbjct: 281 -ERMQNGSVADWKHGLNGNPDPR---WREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLI 336 Query: 352 MQGYVYILTHPGTPAVFYDHIFSHLQQD-IAKLISIRQRLKIQCRSKIKIIKAEQNLYA 525 Q Y YILT PGTP V++ H++ D I +LI +R+ ++ S I L A Sbjct: 337 RQAYAYILTSPGTPVVYWSHMYDWGYGDFIRQLIQVRRTAGVRADSAISFHSGYSGLVA 395
>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 348 Score = 68.9 bits (167), Expect = 1e-11 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = +1 Query: 214 EYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRFPYGMEMQGYVYILTHPGTP 393 E WRL E G PG++GWWP++A TF++NHDTG+ P Sbjct: 273 ELWRLRGEDGKAPGMIGWWPAKATTFVDNHDTGN-------------------------P 307 Query: 394 AVFYDHIFS-HLQQDIAKLISIRQR 465 +FYDH F L+ +I +L+SIR R Sbjct: 308 CIFYDHFFDWGLKDEIERLVSIRNR 332
>AMY_BACST (P06279) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 549 Score = 50.1 bits (118), Expect = 5e-06 Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 3/143 (2%) Frame = +1 Query: 34 EPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGILHMALERS 213 +P F VGEYW SY D N ++ ++I TNGT FD + A + Sbjct: 291 KPLFTVGEYW---SY-----DIN------KLHNYIMKTNGTMSLFDAPLHNKFYTASKSG 336 Query: 214 EYWRLSDEKGNPPGVLGWWPSRAVTFIENHDT--GSTQGHWRFPYGMEMQGYVYILT-HP 384 + + N ++ P+ AVTF++NHDT G W P+ + Y +ILT Sbjct: 337 GTFDMRTLMTNT--LMKDQPTLAVTFVDNHDTEPGQALQSWVDPW-FKPLAYAFILTRQE 393 Query: 385 GTPAVFYDHIFSHLQQDIAKLIS 453 G P VFY + Q +I L S Sbjct: 394 GYPCVFYGDYYGIPQYNIPSLKS 416
>AMY_BACAM (P00692) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 514 Score = 41.2 bits (95), Expect = 0.002 Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 15/152 (9%) Frame = +1 Query: 7 YVKDYMEAT-----EPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTAGAFD 171 +++D+++A + F V EYW + + ++ +++N T+ FD Sbjct: 271 FLRDWVQAVRQATGKEMFTVAEYWQN--------------NAGKLENYLNKTSFNQSVFD 316 Query: 172 VTTKGILHMALERS---EYWRLSDEKGNPPGVLGWWPSRAVTFIENHDT------GSTQG 324 V L A + + RL D V+ P +AVTF+ENHDT ST Sbjct: 317 VPLHFNLQAASSQGGGYDMRRLLDGT-----VVSRHPEKAVTFVENHDTQPGQSLESTVQ 371 Query: 325 HWRFPYGMEMQGYVYILT-HPGTPAVFYDHIF 417 W P Y +ILT G P VFY ++ Sbjct: 372 TWFKPL-----AYAFILTRESGYPQVFYGDMY 398
>AMY_BACLI (P06278) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (BLA) Length = 512 Score = 39.7 bits (91), Expect = 0.007 Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 8/171 (4%) Frame = +1 Query: 43 FAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGILHMALERSEYW 222 F V EYW + G ++ +++N TN FDV H A + + Sbjct: 286 FTVAEYWQN---DLGALE-----------NYLNKTNFNHSVFDVPLHYQFHAASTQGGGY 331 Query: 223 RLSDEKGNPPGVLGWWPSRAVTFIENHDT------GSTQGHWRFPYGMEMQGYVYILT-H 381 + + V+ P +AVTF++NHDT ST W P Y +ILT Sbjct: 332 DMRKLLNST--VVSKHPLKAVTFVDNHDTQPGQSLESTVQTWFKPL-----AYAFILTRE 384 Query: 382 PGTPAVFYDHIFSHLQQDIAKLISIRQRLKIQCRSKIKIIKA-EQNLYAAQ 531 G P VFY ++ ++ +++ +++ I+KA +Q Y AQ Sbjct: 385 SGYPQVFYGDMYGTKGDSQREIPALKHKIE-------PILKARKQYAYGAQ 428
>AMY2_ECOLI (P26612) Cytoplasmic alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 495 Score = 33.9 bits (76), Expect = 0.37 Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 8/152 (5%) Frame = +1 Query: 7 YVKDYME-----ATEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTAGAFD 171 + K+++E A +P F V EYW E+D ++ +I+ G FD Sbjct: 244 FYKEWIEHVQEVAPKPLFIVAEYWSH------EVD--------KLQTYIDQVEGKTMLFD 289 Query: 172 VTTKGILHMALERSEYWRLSDEKGNPPGVLGWW-PSRAVTFIENHDTGSTQGHWR--FPY 342 + H E S R D G L P AVT + NHDT Q P+ Sbjct: 290 APLQMKFH---EASRMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQPLQALEAPVEPW 346 Query: 343 GMEMQGYVYILTHPGTPAVFYDHIFSHLQQDI 438 + + +L G P+VFY ++ +D+ Sbjct: 347 FKPLAYALILLRENGVPSVFYPDLYGAHYEDV 378
>AMY2_SALTY (P26613) Cytoplasmic alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 494 Score = 33.5 bits (75), Expect = 0.48 Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 8/151 (5%) Frame = +1 Query: 7 YVKDYME-----ATEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTAGAFD 171 + K+++E A +P F V EYW E+D ++ +I+ +G FD Sbjct: 244 FYKEWIEHVQAVAPKPLFIVAEYWSH------EVD--------KLQTYIDQVDGKTMLFD 289 Query: 172 VTTKGILHMALER-SEYWRLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWR--FPY 342 + H A + +EY G ++ P AVT + NHDT Q P+ Sbjct: 290 APLQMKFHEASRQGAEYDMRHIFTGT---LVEADPFHAVTLVANHDTQPLQALEAPVEPW 346 Query: 343 GMEMQGYVYILTHPGTPAVFYDHIFSHLQQD 435 + + +L G P+VFY ++ +D Sbjct: 347 FKPLAYALILLRENGVPSVFYPDLYGASYED 377
>LEUD_SALTI (Q8Z9I3) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 201 Score = 32.7 bits (73), Expect = 0.81 Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 16/123 (13%) Frame = +1 Query: 220 WRLSDEKG---NPPGVLGWWPSRAVTFI---ENHDTGSTQGHWRFPYGMEMQGYVYILTH 381 WR DEKG NP VL + + + + EN GS++ H P+ + G+ ++ Sbjct: 47 WRFLDEKGQQPNPEFVLNFPEYQGASILLARENFGCGSSREH--APWALTDYGFKVVIA- 103 Query: 382 PGTPAVFYDHIFSH----------LQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQ 531 P +FY + F++ ++ L+ +K + + +++KA Y+ + Sbjct: 104 PSFADIFYGNSFNNQLLPVKLSDEQVDELFTLVKANPGIKFEVDLEAQVVKAGDKTYSFK 163 Query: 532 INE 540 I++ Sbjct: 164 IDD 166
>LEUD_SALPA (Q5PDG4) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 201 Score = 32.7 bits (73), Expect = 0.81 Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 16/123 (13%) Frame = +1 Query: 220 WRLSDEKG---NPPGVLGWWPSRAVTFI---ENHDTGSTQGHWRFPYGMEMQGYVYILTH 381 WR DEKG NP VL + + + + EN GS++ H P+ + G+ ++ Sbjct: 47 WRFLDEKGQQPNPEFVLNFPEYQGASILLARENFGCGSSREH--APWALTDYGFKVVIA- 103 Query: 382 PGTPAVFYDHIFSH----------LQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQ 531 P +FY + F++ ++ L+ +K + + +++KA Y+ + Sbjct: 104 PSFADIFYGNSFNNQLLPVKLSDEQVDELFTLVKANPGIKFEVDLEAQVVKAGDKTYSFK 163 Query: 532 INE 540 I++ Sbjct: 164 IDD 166
>LEUD1_SALTY (P04787) 3-isopropylmalate dehydratase small subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 201 Score = 32.7 bits (73), Expect = 0.81 Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 16/123 (13%) Frame = +1 Query: 220 WRLSDEKG---NPPGVLGWWPSRAVTFI---ENHDTGSTQGHWRFPYGMEMQGYVYILTH 381 WR DEKG NP VL + + + + EN GS++ H P+ + G+ ++ Sbjct: 47 WRFLDEKGQQPNPEFVLNFPEYQGASILLARENFGCGSSREH--APWALTDYGFKVVIA- 103 Query: 382 PGTPAVFYDHIFSH----------LQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQ 531 P +FY + F++ ++ L+ +K + + +++KA Y+ + Sbjct: 104 PSFADIFYGNSFNNQLLPVTLSDAQVDELFALVKANPGIKFEVDLEAQVVKAGDKTYSFK 163 Query: 532 INE 540 I++ Sbjct: 164 IDD 166
>AMY4_SCHPO (Q9Y7S9) Probable alpha-amylase C63.02c precursor (EC 3.2.1.1)| (1,4-alpha-D-glucan glucanohydrolase) Length = 564 Score = 31.2 bits (69), Expect = 2.4 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = +1 Query: 283 VTFIENHDTGSTQGHWRFPYGMEMQGYV-----YILTHPGTPAVFY 405 +TFIENHD +RFPY Q + ++L G P++FY Sbjct: 315 LTFIENHDL------YRFPYYTSDQSQIMGALSFVLIWDGIPSIFY 354
>NEPU1_THEVU (Q60053) Neopullulanase 1 precursor (EC 3.2.1.135) (Alpha-amylase| I) (TVA I) Length = 666 Score = 30.8 bits (68), Expect = 3.1 Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 5/137 (3%) Frame = +1 Query: 10 VKDYMEATEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGI 189 + +Y P+ A G WD+ + N D Q + +WI + + ++T Sbjct: 423 IGEYWGNANPWTAQGNQWDAAT--------NFDGFTQPVSEWITGKDYQNNSASISTT-- 472 Query: 190 LHMALERSEYWRLSDEKGNPPGVLGWWPSRAVTFIENHD-----TGSTQGHWRFPYGMEM 354 + + W P V + F+ NHD T S W+ + Sbjct: 473 ------QFDSWLRGTRANYPTNV----QQSMMNFLSNHDITRFATRSGGDLWKTYLAL-- 520 Query: 355 QGYVYILTHPGTPAVFY 405 ++ +T+ GTP ++Y Sbjct: 521 ---IFQMTYVGTPTIYY 534
>AMT6_BACS7 (P19571) Glucan 1,4-alpha-maltohexaosidase precursor (EC 3.2.1.98)| (G6-amylase) (Maltohexaose-producing amylase) (Exo-maltohexaohydrolase) Length = 518 Score = 30.4 bits (67), Expect = 4.0 Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 2/123 (1%) Frame = +1 Query: 43 FAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGILHMALERSEYW 222 FAV E+W + I +++ TN FDV L+ A + + Sbjct: 295 FAVAEFWKN--------------DLGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNY 340 Query: 223 RLSDEKGNPPGVLGWWPSRAVTFIENHDTGSTQGHWRF-PYGMEMQGYVYILT-HPGTPA 396 + + V+ PS AVTF++NHD+ + F + Y LT G P+ Sbjct: 341 DMRNIFNGT--VVQRHPSHAVTFVDNHDSQPEEALESFVEEWFKPLAYALTLTREQGYPS 398 Query: 397 VFY 405 VFY Sbjct: 399 VFY 401
>LEUD1_SALCH (Q57TE9) 3-isopropylmalate dehydratase small subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 201 Score = 30.4 bits (67), Expect = 4.0 Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 16/123 (13%) Frame = +1 Query: 220 WRLSDEKG---NPPGVLGWWPSRAVTFI---ENHDTGSTQGHWRFPYGMEMQGYVYILTH 381 WR DEKG NP VL + + + + EN GS++ H P+ + G+ ++ Sbjct: 47 WRFLDEKGQQPNPEFVLNFPEYQGASILLARENFGCGSSREH--APWALTDYGFKVVIA- 103 Query: 382 PGTPAVFYDHIFSH----------LQQDIAKLISIRQRLKIQCRSKIKIIKAEQNLYAAQ 531 P +FY + F++ ++ L+ + + + +++KA Y+ + Sbjct: 104 PSFADIFYGNSFNNQLLPVTLSDAQVDELFALVKANPGIHFEVDLEAQVVKAGDKTYSFK 163 Query: 532 INE 540 I++ Sbjct: 164 IDD 166
>TAM_ECOLI (P76145) Trans-aconitate 2-methyltransferase (EC 2.1.1.144)| Length = 251 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Frame = +1 Query: 34 EPYFAVGEYWDSLSYTYGEMD------YNQDAHRQRIVDWINAT 147 EP V Y+D LS E+D Y+Q Q I+DW+ AT Sbjct: 156 EPLAGVHAYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTAT 199
>RAPF_BACSU (P71002) Response regulator aspartate phosphatase F (EC 3.1.-.-)| Length = 381 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 7 YVKDYMEATEPYFAVGEYWDSLSYTYGEMDYNQDAH 114 +VKD +E E +F + E + + TY MDY + A+ Sbjct: 133 FVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAY 168
>LEUD_ECO57 (Q8XA01) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 200 Score = 29.3 bits (64), Expect = 9.0 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Frame = +1 Query: 220 WRLSDEKG---NPPGVLGWWPSRAVTFI---ENHDTGSTQGHWRFPYGMEMQGYVYILTH 381 WR DEKG NP VL + + + + EN GS++ H P+ + G+ ++ Sbjct: 46 WRFLDEKGQQPNPDFVLNFSQYQGASILLARENFGCGSSREH--APWALTDYGFKVVIA- 102 Query: 382 PGTPAVFYDHIFSH 423 P +FY + F++ Sbjct: 103 PSFADIFYGNSFNN 116 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,531,256 Number of Sequences: 219361 Number of extensions: 1706231 Number of successful extensions: 4577 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4378 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4516 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
