| Clone Name | baal34e13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY224492.1| Oryza sativa (japonica cultivar-group) isolate 30857 unknown mRNA Length = 492 Score = 349 bits (176), Expect = 6e-93 Identities = 276/306 (90%), Gaps = 5/306 (1%) Strand = Plus / Plus Query: 38 ggacccccgtcctatgcaagcc-aacgtcggcgccatggaagcggcgctcaggatcgcca 96 |||| |||||||| |||||||| ||||||| ||||||||| | ||| ||||||||||||| Sbjct: 3 ggacacccgtcctctgcaagcccaacgtcgacgccatggaggaggccctcaggatcgcca 62 Query: 97 acgtgaacccttacaaggcgattttcttcgacgacagcgtgcgcaacattcaggcaggca 156 ||||||||||| ||||||||||||||||||||||||||||| | ||||| ||||| || | Sbjct: 63 acgtgaaccctcacaaggcgattttcttcgacgacagcgtgaggaacatccaggcgggga 122 Query: 157 agcgaattggcctccacacggtgctggttggcacgtcacacccgggtgaagggcgcggat 216 || | || || ||||||||||||||||| |||||| | || | |||||||||||||||| Sbjct: 123 agaggatcgggctccacacggtgctggtgggcacgccgcagc-gggtgaagggcgcggac 181 Query: 217 cacgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 cacgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggcc 241 Query: 277 gagaagacggaggacg---tcctctacgccgaccgcgtcgcgatcgagacatcggtgacc 333 |||||| ||||||||| || ||||| ||||||||||||| |||||||||||||||||| Sbjct: 242 gagaaggcggaggacgtgctcatctactccgaccgcgtcgccatcgagacatcggtgacc 301 Query: 334 gcgtag 339 |||||| Sbjct: 302 gcgtag 307 Score = 40.1 bits (20), Expect = 7.0 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 435 ggtgatcatcacgtgg-aattcagcattggccggga 469 ||||||||||| |||| ||||||| ||||||||||| Sbjct: 393 ggtgatcatcaggtgggaattcagaattggccggga 428
>dbj|AK100173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026N03, full insert sequence Length = 1378 Score = 349 bits (176), Expect = 6e-93 Identities = 276/306 (90%), Gaps = 5/306 (1%) Strand = Plus / Plus Query: 38 ggacccccgtcctatgcaagcc-aacgtcggcgccatggaagcggcgctcaggatcgcca 96 |||| |||||||| |||||||| ||||||| ||||||||| | ||| ||||||||||||| Sbjct: 706 ggacacccgtcctctgcaagcccaacgtcgacgccatggaggaggccctcaggatcgcca 765 Query: 97 acgtgaacccttacaaggcgattttcttcgacgacagcgtgcgcaacattcaggcaggca 156 ||||||||||| ||||||||||||||||||||||||||||| | ||||| ||||| || | Sbjct: 766 acgtgaaccctcacaaggcgattttcttcgacgacagcgtgaggaacatccaggcgggga 825 Query: 157 agcgaattggcctccacacggtgctggttggcacgtcacacccgggtgaagggcgcggat 216 || | || || ||||||||||||||||| |||||| | || | |||||||||||||||| Sbjct: 826 agaggatcgggctccacacggtgctggtgggcacgccgcagc-gggtgaagggcgcggac 884 Query: 217 cacgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 cacgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggcc 944 Query: 277 gagaagacggaggacg---tcctctacgccgaccgcgtcgcgatcgagacatcggtgacc 333 |||||| ||||||||| || ||||| ||||||||||||| |||||||||||||||||| Sbjct: 945 gagaaggcggaggacgtgctcatctactccgaccgcgtcgccatcgagacatcggtgacc 1004 Query: 334 gcgtag 339 |||||| Sbjct: 1005 gcgtag 1010 Score = 40.1 bits (20), Expect = 7.0 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 435 ggtgatcatcacgtgg-aattcagcattggccggga 469 ||||||||||| |||| ||||||| ||||||||||| Sbjct: 1096 ggtgatcatcaggtgggaattcagaattggccggga 1131
>dbj|AK059223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D05, full insert sequence Length = 1314 Score = 349 bits (176), Expect = 6e-93 Identities = 276/306 (90%), Gaps = 5/306 (1%) Strand = Plus / Plus Query: 38 ggacccccgtcctatgcaagcc-aacgtcggcgccatggaagcggcgctcaggatcgcca 96 |||| |||||||| |||||||| ||||||| ||||||||| | ||| ||||||||||||| Sbjct: 705 ggacacccgtcctctgcaagcccaacgtcgacgccatggaggaggccctcaggatcgcca 764 Query: 97 acgtgaacccttacaaggcgattttcttcgacgacagcgtgcgcaacattcaggcaggca 156 ||||||||||| ||||||||||||||||||||||||||||| | ||||| ||||| || | Sbjct: 765 acgtgaaccctcacaaggcgattttcttcgacgacagcgtgaggaacatccaggcgggga 824 Query: 157 agcgaattggcctccacacggtgctggttggcacgtcacacccgggtgaagggcgcggat 216 || | || || ||||||||||||||||| |||||| | || | |||||||||||||||| Sbjct: 825 agaggatcgggctccacacggtgctggtgggcacgccgcagc-gggtgaagggcgcggac 883 Query: 217 cacgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 cacgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggcc 943 Query: 277 gagaagacggaggacg---tcctctacgccgaccgcgtcgcgatcgagacatcggtgacc 333 |||||| ||||||||| || ||||| ||||||||||||| |||||||||||||||||| Sbjct: 944 gagaaggcggaggacgtgctcatctactccgaccgcgtcgccatcgagacatcggtgacc 1003 Query: 334 gcgtag 339 |||||| Sbjct: 1004 gcgtag 1009 Score = 40.1 bits (20), Expect = 7.0 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 435 ggtgatcatcacgtgg-aattcagcattggccggga 469 ||||||||||| |||| ||||||| ||||||||||| Sbjct: 1095 ggtgatcatcaggtgggaattcagaattggccggga 1130
>dbj|AK067356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103J23, full insert sequence Length = 1315 Score = 333 bits (168), Expect = 3e-88 Identities = 271/302 (89%), Gaps = 5/302 (1%) Strand = Plus / Plus Query: 38 ggacccccgtcctatgcaagcc-aacgtcggcgccatggaagcggcgctcaggatcgcca 96 |||| |||||||| |||||||| ||||||| ||||||||| | ||| ||||||||||||| Sbjct: 708 ggacacccgtcctctgcaagcccaacgtcgacgccatggaggaggccctcaggatcgcca 767 Query: 97 acgtgaacccttacaaggcgattttcttcgacgacagcgtgcgcaacattcaggcaggca 156 ||||||||||| ||||||||||||||||||||||||||||| | ||||| ||||| || | Sbjct: 768 acgtgaaccctcacaaggcgattttcttcgacgacagcgtgaggaacatccaggcgggga 827 Query: 157 agcgaattggcctccacacggtgctggttggcacgtcacacccgggtgaagggcgcggat 216 || | || || ||||||||||||||||| |||||| | || | |||||||||||||||| Sbjct: 828 agaggatcgggctccacacggtgctggtgggcacgccgcagc-gggtgaagggcgcggac 886 Query: 217 cacgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggcc 276 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 887 cacgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggagtcc 946 Query: 277 gagaagacggaggacg---tcctctacgccgaccgcgtcgcgatcgagacatcggtgacc 333 |||||| ||||||||| || ||||| ||||||||||||| |||||||||||||||||| Sbjct: 947 gagaaggcggaggacgtgctcatctactccgaccgcgtcgccatcgagacatcggtgacc 1006 Query: 334 gc 335 || Sbjct: 1007 gc 1008
>gb|AY106832.1| Zea mays PCO074808 mRNA sequence Length = 1378 Score = 319 bits (161), Expect = 5e-84 Identities = 268/301 (89%), Gaps = 2/301 (0%) Strand = Plus / Plus Query: 39 gacccccgtcctatgcaagcc-aacgtcggcgccatggaagcggcgctcaggatcgccaa 97 |||||||||||| |||||||| ||||| | ||||||||| | |||||||||||||||||| Sbjct: 708 gacccccgtcctgtgcaagcctaacgtggacgccatggaggaggcgctcaggatcgccaa 767 Query: 98 cgtgaacccttacaaggcgattttcttcgacgacagcgtgcgcaacattcaggcaggcaa 157 ||| ||||| |||||||||| ||||||||||||||||| |||||||| ||||| || || Sbjct: 768 cgtcaacccgcacaaggcgatcttcttcgacgacagcgtacgcaacatccaggccgggaa 827 Query: 158 gcgaattggcctccacacggtgctggttggcacgtcacacccgggtgaagggcgcggatc 217 || ||||||||||||||||||||||| |||| || || | ||||||| |||||||| | Sbjct: 828 gcagattggcctccacacggtgctggtgggcaaatcgcagc-gggtgaaaggcgcggacc 886 Query: 218 acgcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggccg 277 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 887 acgcgctggagagcatccacaacatcagggaagcgctgccggagctgtgggaggaggccg 946 Query: 278 agaagacggaggacgtcctctacgccgaccgcgtcgcgatcgagacatcggtgaccgcgt 337 ||||| |||||||||| |||||| |||| ||||| ||||| ||||| ||||| ||||||| Sbjct: 947 agaaggcggaggacgtgctctaccccgaacgcgttgcgatggagacctcggtcaccgcgt 1006 Query: 338 a 338 | Sbjct: 1007 a 1007
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 264 bits (133), Expect = 3e-67 Identities = 205/227 (90%), Gaps = 4/227 (1%) Strand = Plus / Plus Query: 116 gattttcttcgacgacagcgtgcgcaacattcaggcaggcaagcgaattggcctccacac 175 |||||||||||||||||||||| | ||||| ||||| || ||| | || || |||||||| Sbjct: 9176398 gattttcttcgacgacagcgtgaggaacatccaggcggggaagaggatcgggctccacac 9176457 Query: 176 ggtgctggttggcacgtcacacccgggtgaagggcgcggatcacgcgctggagagcatcc 235 ||||||||| |||||| | || | |||||||||||||||| ||||||||||||||||||| Sbjct: 9176458 ggtgctggtgggcacgccgcagc-gggtgaagggcgcggaccacgcgctggagagcatcc 9176516 Query: 236 acaacatcagggaggcgctgccggagctgtgggaggaggccgagaagacggaggacg--- 292 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9176517 acaacatcagggaggcgctgccggagctgtgggaggaggccgagaaggcggaggacgtgc 9176576 Query: 293 tcctctacgccgaccgcgtcgcgatcgagacatcggtgaccgcgtag 339 || ||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 9176577 tcatctactccgaccgcgtcgccatcgagacatcggtgaccgcgtag 9176623 Score = 87.7 bits (44), Expect = 3e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 38 ggacccccgtcctatgcaagcc-aacgtcggcgccatggaagcggcgctcaggatcgcca 96 |||| |||||||| |||||||| ||||||| ||||||||| | ||| ||||||||||||| Sbjct: 9176217 ggacacccgtcctctgcaagcccaacgtcgacgccatggaggaggccctcaggatcgcca 9176276 Query: 97 acgtgaacccttacaaggcg 116 ||||||||||| |||||||| Sbjct: 9176277 acgtgaaccctcacaaggcg 9176296 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 gacgccgccgccgccgctggc 359 ||||||||||||||||||||| Sbjct: 27545252 gacgccgccgccgccgctggc 27545232 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 cgtagacgccgccgccgccgc 355 ||||||||||||||||||||| Sbjct: 20161615 cgtagacgccgccgccgccgc 20161595 Score = 40.1 bits (20), Expect = 7.0 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 435 ggtgatcatcacgtgg-aattcagcattggccggga 469 ||||||||||| |||| ||||||| ||||||||||| Sbjct: 9176709 ggtgatcatcaggtgggaattcagaattggccggga 9176744
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 264 bits (133), Expect = 3e-67 Identities = 205/227 (90%), Gaps = 4/227 (1%) Strand = Plus / Minus Query: 116 gattttcttcgacgacagcgtgcgcaacattcaggcaggcaagcgaattggcctccacac 175 |||||||||||||||||||||| | ||||| ||||| || ||| | || || |||||||| Sbjct: 109993 gattttcttcgacgacagcgtgaggaacatccaggcggggaagaggatcgggctccacac 109934 Query: 176 ggtgctggttggcacgtcacacccgggtgaagggcgcggatcacgcgctggagagcatcc 235 ||||||||| |||||| | || | |||||||||||||||| ||||||||||||||||||| Sbjct: 109933 ggtgctggtgggcacgccgcagc-gggtgaagggcgcggaccacgcgctggagagcatcc 109875 Query: 236 acaacatcagggaggcgctgccggagctgtgggaggaggccgagaagacggaggacg--- 292 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 109874 acaacatcagggaggcgctgccggagctgtgggaggaggccgagaaggcggaggacgtgc 109815 Query: 293 tcctctacgccgaccgcgtcgcgatcgagacatcggtgaccgcgtag 339 || ||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 109814 tcatctactccgaccgcgtcgccatcgagacatcggtgaccgcgtag 109768 Score = 87.7 bits (44), Expect = 3e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 38 ggacccccgtcctatgcaagcc-aacgtcggcgccatggaagcggcgctcaggatcgcca 96 |||| |||||||| |||||||| ||||||| ||||||||| | ||| ||||||||||||| Sbjct: 110174 ggacacccgtcctctgcaagcccaacgtcgacgccatggaggaggccctcaggatcgcca 110115 Query: 97 acgtgaacccttacaaggcg 116 ||||||||||| |||||||| Sbjct: 110114 acgtgaaccctcacaaggcg 110095 Score = 40.1 bits (20), Expect = 7.0 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 435 ggtgatcatcacgtgg-aattcagcattggccggga 469 ||||||||||| |||| ||||||| ||||||||||| Sbjct: 109682 ggtgatcatcaggtgggaattcagaattggccggga 109647
>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0016G06, complete sequence Length = 119910 Score = 264 bits (133), Expect = 3e-67 Identities = 205/227 (90%), Gaps = 4/227 (1%) Strand = Plus / Plus Query: 116 gattttcttcgacgacagcgtgcgcaacattcaggcaggcaagcgaattggcctccacac 175 |||||||||||||||||||||| | ||||| ||||| || ||| | || || |||||||| Sbjct: 119578 gattttcttcgacgacagcgtgaggaacatccaggcggggaagaggatcgggctccacac 119637 Query: 176 ggtgctggttggcacgtcacacccgggtgaagggcgcggatcacgcgctggagagcatcc 235 ||||||||| |||||| | || | |||||||||||||||| ||||||||||||||||||| Sbjct: 119638 ggtgctggtgggcacgccgcagc-gggtgaagggcgcggaccacgcgctggagagcatcc 119696 Query: 236 acaacatcagggaggcgctgccggagctgtgggaggaggccgagaagacggaggacg--- 292 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119697 acaacatcagggaggcgctgccggagctgtgggaggaggccgagaaggcggaggacgtgc 119756 Query: 293 tcctctacgccgaccgcgtcgcgatcgagacatcggtgaccgcgtag 339 || ||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 119757 tcatctactccgaccgcgtcgccatcgagacatcggtgaccgcgtag 119803 Score = 87.7 bits (44), Expect = 3e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 38 ggacccccgtcctatgcaagcc-aacgtcggcgccatggaagcggcgctcaggatcgcca 96 |||| |||||||| |||||||| ||||||| ||||||||| | ||| ||||||||||||| Sbjct: 119397 ggacacccgtcctctgcaagcccaacgtcgacgccatggaggaggccctcaggatcgcca 119456 Query: 97 acgtgaacccttacaaggcg 116 ||||||||||| |||||||| Sbjct: 119457 acgtgaaccctcacaaggcg 119476
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 264 bits (133), Expect = 3e-67 Identities = 205/227 (90%), Gaps = 4/227 (1%) Strand = Plus / Plus Query: 116 gattttcttcgacgacagcgtgcgcaacattcaggcaggcaagcgaattggcctccacac 175 |||||||||||||||||||||| | ||||| ||||| || ||| | || || |||||||| Sbjct: 9174231 gattttcttcgacgacagcgtgaggaacatccaggcggggaagaggatcgggctccacac 9174290 Query: 176 ggtgctggttggcacgtcacacccgggtgaagggcgcggatcacgcgctggagagcatcc 235 ||||||||| |||||| | || | |||||||||||||||| ||||||||||||||||||| Sbjct: 9174291 ggtgctggtgggcacgccgcagc-gggtgaagggcgcggaccacgcgctggagagcatcc 9174349 Query: 236 acaacatcagggaggcgctgccggagctgtgggaggaggccgagaagacggaggacg--- 292 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9174350 acaacatcagggaggcgctgccggagctgtgggaggaggccgagaaggcggaggacgtgc 9174409 Query: 293 tcctctacgccgaccgcgtcgcgatcgagacatcggtgaccgcgtag 339 || ||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 9174410 tcatctactccgaccgcgtcgccatcgagacatcggtgaccgcgtag 9174456 Score = 87.7 bits (44), Expect = 3e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 38 ggacccccgtcctatgcaagcc-aacgtcggcgccatggaagcggcgctcaggatcgcca 96 |||| |||||||| |||||||| ||||||| ||||||||| | ||| ||||||||||||| Sbjct: 9174050 ggacacccgtcctctgcaagcccaacgtcgacgccatggaggaggccctcaggatcgcca 9174109 Query: 97 acgtgaacccttacaaggcg 116 ||||||||||| |||||||| Sbjct: 9174110 acgtgaaccctcacaaggcg 9174129 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 gacgccgccgccgccgctggc 359 ||||||||||||||||||||| Sbjct: 27636575 gacgccgccgccgccgctggc 27636555 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 cgtagacgccgccgccgccgc 355 ||||||||||||||||||||| Sbjct: 20154642 cgtagacgccgccgccgccgc 20154622 Score = 40.1 bits (20), Expect = 7.0 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 435 ggtgatcatcacgtgg-aattcagcattggccggga 469 ||||||||||| |||| ||||||| ||||||||||| Sbjct: 9174542 ggtgatcatcaggtgggaattcagaattggccggga 9174577
>ref|NM_193122.1| Oryza sativa (japonica cultivar-group), mRNA Length = 834 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 220 gcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggagg 271 ||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 697 gcgctggagagcatccacaacatcaaggaggcggtgccggagctgtgggagg 748
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 220 gcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggagg 271 ||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 26274201 gcgctggagagcatccacaacatcaaggaggcggtgccggagctgtgggagg 26274150 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 8021058 cgccgccgccgccgctggctc 8021078 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 1247961 cgccgccgccgccgctggctc 1247981 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 25315172 cgccgccgccgccgctggct 25315191
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 220 gcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggagg 271 ||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 48829 gcgctggagagcatccacaacatcaaggaggcggtgccggagctgtgggagg 48778
>gb|AY104976.1| Zea mays PCO136133 mRNA sequence Length = 712 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 220 gcgctggagagcatccacaacatcagggaggcgctgccggagctgtgggagg 271 ||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 322 gcgctggagagcatccacaacatcaaggaggcgctgccggagctctgggagg 373
>gb|AY105377.1| Zea mays PCO061803 mRNA sequence Length = 679 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 224 tggagagcatccacaacatcagggaggcgctgccggagctgtgggaggaggccgagaag 282 |||| ||| |||||||||| | ||| || |||||||||||||||||||| || |||||| Sbjct: 431 tggaaagcctccacaacatgaaggaagcactgccggagctgtgggaggaagctgagaag 489
>gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete sequence Length = 294716 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctcccgg 365 ||||||||||||||||||||||||| Sbjct: 238557 cgccgccgccgccgctggctcccgg 238581
>ref|NM_184156.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1394 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 333 cgcgtagacgccgccgccgccgc 355 ||||||||||||||||||||||| Sbjct: 482 cgcgtagacgccgccgccgccgc 460
>gb|AY023190.1| Oryza sativa microsatellite MRG5515 containing (GCG)X8, genomic sequence Length = 224 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 333 cgcgtagacgccgccgccgccgc 355 ||||||||||||||||||||||| Sbjct: 132 cgcgtagacgccgccgccgccgc 110
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 339 gacgccgccgccgccgctggctcccggtgca 369 ||||||||||||||||| | ||||||||||| Sbjct: 2761101 gacgccgccgccgccgccgcctcccggtgca 2761071 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 623442 cgccgccgccgccgctggct 623461
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 333 cgcgtagacgccgccgccgccgc 355 ||||||||||||||||||||||| Sbjct: 1253723 cgcgtagacgccgccgccgccgc 1253701 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 339 gacgccgccgccgccgctggctcc 362 ||||||||||||||||| |||||| Sbjct: 11786307 gacgccgccgccgccgcaggctcc 11786284
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 333 cgcgtagacgccgccgccgccgc 355 ||||||||||||||||||||||| Sbjct: 47377 cgcgtagacgccgccgccgccgc 47355
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 339 gacgccgccgccgccgctggctcccggtgca 369 ||||||||||||||||| | ||||||||||| Sbjct: 29329 gacgccgccgccgccgccgcctcccggtgca 29299
>dbj|AK107171.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G03, full insert sequence Length = 1394 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 333 cgcgtagacgccgccgccgccgc 355 ||||||||||||||||||||||| Sbjct: 482 cgcgtagacgccgccgccgccgc 460
>emb|CR925723.7| Zebrafish DNA sequence from clone RP71-81E14, complete sequence Length = 157989 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 471 aaaacagtatccagcacgagga 492 |||||||||||||||||||||| Sbjct: 143291 aaaacagtatccagcacgagga 143312
>emb|CR925757.8| Zebrafish DNA sequence from clone CH211-208H16 in linkage group 5, complete sequence Length = 154617 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 471 aaaacagtatccagcacgagga 492 |||||||||||||||||||||| Sbjct: 50525 aaaacagtatccagcacgagga 50546
>emb|AJ237988.1|VVI237988 Vitis vinifera mRNA for putative ripening-related protein (grip21 gene) Length = 1190 Score = 44.1 bits (22), Expect = 0.45 Identities = 40/46 (86%) Strand = Plus / Plus Query: 226 gagagcatccacaacatcagggaggcgctgccggagctgtgggagg 271 ||||||||||||||||| ||||| || | || ||||||||||||| Sbjct: 902 gagagcatccacaacatgagggaagcattaccagagctgtgggagg 947
>ref|XM_469361.1| Oryza sativa (japonica cultivar-group), mRNA Length = 774 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 gacgccgccgccgccgctggc 359 ||||||||||||||||||||| Sbjct: 234 gacgccgccgccgccgctggc 214
>ref|NM_186821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 198 cgccgccgccgccgctggctc 178
>ref|XM_476445.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1131 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 25 cgccgccgccgccgctggctc 45
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 5927 cgccgccgccgccgctggctc 5907
>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete sequence Length = 151269 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 cgtagacgccgccgccgccgc 355 ||||||||||||||||||||| Sbjct: 79699 cgtagacgccgccgccgccgc 79679
>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01, complete sequence Length = 156691 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 81908 cgccgccgccgccgctggctc 81888
>ref|XM_359584.1| Magnaporthe grisea 70-15 hypothetical protein (MG05193.4) partial mRNA Length = 2463 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 cgccgccgctggctcccggtgcacc 371 |||||||||||||| |||||||||| Sbjct: 2419 cgccgccgctggctgccggtgcacc 2395
>ref|XM_322305.1| Neurospora crassa OR74A hypothetical protein (NCU00220.1) partial mRNA Length = 762 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 163 cgccgccgccgccgctggctc 143
>ref|XM_951512.1| Neurospora crassa OR74A hypothetical protein (NCU00220.1) partial mRNA Length = 762 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 163 cgccgccgccgccgctggctc 143
>ref|NM_183006.1| Homo sapiens discs, large (Drosophila) homolog-associated protein 4 (DLGAP4), transcript variant 2, mRNA Length = 3794 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 344 cgccgccgccgctggctcccggtgcacct 372 |||||||||||||||||| ||| |||||| Sbjct: 3167 cgccgccgccgctggctctcggggcacct 3195
>ref|NM_014902.2| Homo sapiens discs, large (Drosophila) homolog-associated protein 4 (DLGAP4), transcript variant 1, mRNA Length = 5007 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 344 cgccgccgccgctggctcccggtgcacct 372 |||||||||||||||||| ||| |||||| Sbjct: 4380 cgccgccgccgctggctctcggggcacct 4408
>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete sequence Length = 27470 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 gacgccgccgccgccgctggc 359 ||||||||||||||||||||| Sbjct: 17522 gacgccgccgccgccgctggc 17542
>ref|NM_145296.1| Homo sapiens immunoglobulin superfamily, member 4C (IGSF4C), mRNA Length = 2176 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 cgccgccgccgccgctggctcccgg 365 |||||||||||||||| |||||||| Sbjct: 38 cgccgccgccgccgctcgctcccgg 14
>emb|AL050318.13|HSDJ977B1 Human DNA sequence from clone RP5-977B1 on chromosome 20 Contains the 3' end of the SLA2 gene for Src-like-adaptor 2, the HNRPA3P gene for heterogeneous nuclear ribonucleoprotein A3 pseudogene, the C20orf24 gene for chromosome 24 open reading frame 24 (putative RAB5-interacting protein), the TGIF2 gene for TGF(beta)-induced transcription factor 2, the MYRL2 gene for myosin regulatory light chain 2 (smooth muscle variant), the 3' end of a novel gene (KIAA0964), a novel gene, and three CpG islands, complete sequence Length = 145068 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 344 cgccgccgccgctggctcccggtgcacct 372 |||||||||||||||||| ||| |||||| Sbjct: 38724 cgccgccgccgctggctctcggggcacct 38752
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 gaggccgagaagacggaggac 291 ||||||||||||||||||||| Sbjct: 2931955 gaggccgagaagacggaggac 2931935
>emb|CR859652.1| Pongo pygmaeus mRNA; cDNA DKFZp459M159 (from clone DKFZp459M159) Length = 2107 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 344 cgccgccgccgctggctcccggtgcacct 372 |||||||||||||||||| ||| |||||| Sbjct: 1469 cgccgccgccgctggctctcggggcacct 1497
>emb|CR610787.1| full-length cDNA clone CS0DC002YA02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1095 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 344 cgccgccgccgctggctcccggtgcacct 372 |||||||||||||||||| ||| |||||| Sbjct: 481 cgccgccgccgctggctctcggggcacct 509
>dbj|AK001681.1| Homo sapiens cDNA FLJ10819 fis, clone NT2RP4001010, highly similar to Homo sapiens mRNA for KIAA0964 protein Length = 2978 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 344 cgccgccgccgctggctcccggtgcacct 372 |||||||||||||||||| ||| |||||| Sbjct: 2349 cgccgccgccgctggctctcggggcacct 2377
>gb|AC005525.2|AC005525 Homo sapiens chromosome 19, cosmid F22162 (LLNLF-179G2), complete sequence Length = 36991 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctcccgg 365 |||||||||||||||| |||||||| Sbjct: 28420 cgccgccgccgccgctcgctcccgg 28444
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 8673485 cgccgccgccgccgctggctc 8673465 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tagacgccgccgccgccgct 356 |||||||||||||||||||| Sbjct: 23101707 tagacgccgccgccgccgct 23101688
>gb|AC068726.5|AC068726 Homo sapiens chromosome 15 clone RP11-844G16 map 15q21.3, complete sequence Length = 189308 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctcccgg 365 |||||||||||||||| |||||||| Sbjct: 51746 cgccgccgccgccgctcgctcccgg 51770
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 gacgccgccgccgccgctggc 359 ||||||||||||||||||||| Sbjct: 5262 gacgccgccgccgccgctggc 5282
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 12796 cgccgccgccgccgctggctc 12816
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 59255 cgccgccgccgccgctggctc 59275
>dbj|AP005165.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0057M23 Length = 168029 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 149568 cgccgccgccgccgctggctc 149588
>dbj|AB023181.1| Homo sapiens mRNA for KIAA0964 protein, partial cds Length = 5007 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 344 cgccgccgccgctggctcccggtgcacct 372 |||||||||||||||||| ||| |||||| Sbjct: 4380 cgccgccgccgctggctctcggggcacct 4408
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0418E08 Length = 141040 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 137417 cgccgccgccgccgctggctc 137437
>dbj|AK121036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050O10, full insert sequence Length = 2132 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 258 cgccgccgccgccgctggctc 238
>emb|AJ323081.1|HSA323081 Homo sapiens genomic sequence surrounding NotI site, clone NB6-133R Length = 524 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 cgccgccgccgccgctggctcccgg 365 |||||||||||||||| |||||||| Sbjct: 46 cgccgccgccgccgctcgctcccgg 22
>dbj|AP003702.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1007_H09 Length = 42137 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctc 361 ||||||||||||||||||||| Sbjct: 17538 cgccgccgccgccgctggctc 17558
>gb|AF088030.1|HUMZC22B11 Homo sapiens full length insert cDNA clone ZC22B11 Length = 719 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 344 cgccgccgccgctggctcccggtgcacct 372 |||||||||||||||||| ||| |||||| Sbjct: 588 cgccgccgccgctggctctcggggcacct 616
>gb|AF363368.1| Homo sapiens TSLC1-like 2 (TSLL2) mRNA, complete cds Length = 2176 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 341 cgccgccgccgccgctggctcccgg 365 |||||||||||||||| |||||||| Sbjct: 38 cgccgccgccgccgctcgctcccgg 14
>ref|XM_479921.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1149 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acgccgccgccgccgctggc 359 |||||||||||||||||||| Sbjct: 224 acgccgccgccgccgctggc 243
>ref|XM_472419.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 951 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 gacgccgccgccgccgctggctcc 362 ||||||||||||||||| |||||| Sbjct: 229 gacgccgccgccgccgccggctcc 252
>ref|NM_183718.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1593 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 gacgccgccgccgccgctggctcc 362 ||||||||||||||||| |||||| Sbjct: 270 gacgccgccgccgccgcaggctcc 293
>ref|XM_479162.1| Oryza sativa (japonica cultivar-group), mRNA Length = 351 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 41 cgccgccgccgccgctggct 60
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tagacgccgccgccgccgct 356 |||||||||||||||||||| Sbjct: 33482 tagacgccgccgccgccgct 33463
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 119624 cgccgccgccgccgctggct 119643
>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0002C14, complete sequence Length = 154029 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctcccg 364 ||||||||||||||| |||||||| Sbjct: 22345 cgccgccgccgccgccggctcccg 22368
>ref|XM_364831.1| Magnaporthe grisea 70-15 hypothetical protein (MG09676.4) partial mRNA Length = 2313 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gtagacgccgccgccgccgc 355 |||||||||||||||||||| Sbjct: 1056 gtagacgccgccgccgccgc 1037
>ref|XM_958919.1| Neurospora crassa OR74A hypothetical protein (NCU02056.1) partial mRNA Length = 1431 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ggcgctcaggatcgccaacg 99 |||||||||||||||||||| Sbjct: 1185 ggcgctcaggatcgccaacg 1204
>ref|XM_958921.1| Neurospora crassa OR74A hypothetical protein (NCU02058.1) partial mRNA Length = 1740 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 1136 cgccgccgccgccgctggct 1155
>ref|XM_329245.1| Neurospora crassa OR74A hypothetical protein (NCU02056.1) partial mRNA Length = 1431 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ggcgctcaggatcgccaacg 99 |||||||||||||||||||| Sbjct: 1185 ggcgctcaggatcgccaacg 1204
>ref|XM_329247.1| Neurospora crassa OR74A hypothetical protein (NCU02058.1) partial mRNA Length = 1740 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 1136 cgccgccgccgccgctggct 1155
>gb|AC161276.2| Pan troglodytes BAC clone CH251-520C21 from chromosome 7, complete sequence Length = 210088 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 gctgccggagctgtgggagg 271 |||||||||||||||||||| Sbjct: 59393 gctgccggagctgtgggagg 59374
>gb|AC102771.13| Mus musculus chromosome 1, clone RP23-175K23, complete sequence Length = 226416 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gggaaaaaacagtatccagc 485 |||||||||||||||||||| Sbjct: 63102 gggaaaaaacagtatccagc 63083
>gb|AC156620.10| Mus musculus chromosome 5, clone RP23-80G18, complete sequence Length = 248320 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 gggagctcagaaaagtcaaa 515 |||||||||||||||||||| Sbjct: 242956 gggagctcagaaaagtcaaa 242975
>gb|AC002127.1| Homo sapiens BAC clone CTA-305H12 from 7, complete sequence Length = 144165 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gctgccggagctgtgggagg 271 |||||||||||||||||||| Sbjct: 39416 gctgccggagctgtgggagg 39435
>emb|AL953897.6| Human DNA sequence from clone RP11-56N19 on chromosome 1 Contains the 3' end of a novel gene, the AGTRAP gene for angiotensin II receptor-associated protein, two novel genes, the MTHFR gene for 5,10-methylenetetrahydrofolate reductase (NADPH), the 5' end of the CLCN6 gene for chloride channel 6 and a CpG island, complete sequence Length = 102509 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gccgccgccgctggctcccg 364 |||||||||||||||||||| Sbjct: 54175 gccgccgccgctggctcccg 54156
>emb|AL049637.43|HSJ850O15 Human DNA sequence from clone RP5-850O15 on chromosome 1p32.3-34.2 Contains the DMRTA2 gene for DMRT-like family A2, the 3' end of the FAF1 gene for Fas (TNFRSF6) associated factor 1, a novel gene and three CpG islands, complete sequence Length = 111799 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 ccgcgtagacgccgccgccgccgc 355 |||||| ||||||||||||||||| Sbjct: 103060 ccgcgtcgacgccgccgccgccgc 103083
>emb|Y14271.1|GGY14271 Gallus gallus mRNA for Eph-like receptor tyrosine kinase Length = 3943 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tagacgccgccgccgccgct 356 |||||||||||||||||||| Sbjct: 175 tagacgccgccgccgccgct 156
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 gacgccgccgccgccgctggctcc 362 ||||||||||||||||| |||||| Sbjct: 39113 gacgccgccgccgccgccggctcc 39136
>emb|AJ301580.1|HSA301580 Homo sapiens partial mRNA for doublesex-mab-3 (DM) domain (DMRTA2 gene) Length = 1692 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 ccgcgtagacgccgccgccgccgc 355 |||||| ||||||||||||||||| Sbjct: 989 ccgcgtcgacgccgccgccgccgc 1012
>gb|AC113029.23| Mus musculus chromosome 5, clone RP23-206J17, complete sequence Length = 223809 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 gggagctcagaaaagtcaaa 515 |||||||||||||||||||| Sbjct: 157936 gggagctcagaaaagtcaaa 157917
>ref|NM_205083.1| Gallus gallus EPH receptor A7 (EPHA7), mRNA Length = 3943 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tagacgccgccgccgccgct 356 |||||||||||||||||||| Sbjct: 175 tagacgccgccgccgccgct 156
>emb|AL833920.1|HSM805231 Homo sapiens mRNA; cDNA DKFZp434E1410 (from clone DKFZp434E1410) Length = 2565 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gccgccgccgctggctcccg 364 |||||||||||||||||||| Sbjct: 463 gccgccgccgctggctcccg 444
>gb|AC099789.2| Homo sapiens chromosome 1 clone RP11-377K22, complete sequence Length = 174162 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 ccgcgtagacgccgccgccgccgc 355 |||||||| ||||||||||||||| Sbjct: 93943 ccgcgtagccgccgccgccgccgc 93920
>ref|XM_941606.1| PREDICTED: Homo sapiens DMRT-like family A2 (DMRTA2), mRNA Length = 2737 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 ccgcgtagacgccgccgccgccgc 355 |||||| ||||||||||||||||| Sbjct: 1155 ccgcgtcgacgccgccgccgccgc 1178
>ref|XM_938203.1| PREDICTED: Homo sapiens chromosome 1 open reading frame 167 (C1orf167), mRNA Length = 5317 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gccgccgccgctggctcccg 364 |||||||||||||||||||| Sbjct: 1409 gccgccgccgctggctcccg 1390
>ref|XM_027162.5| PREDICTED: Homo sapiens DMRT-like family A2 (DMRTA2), mRNA Length = 2738 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 ccgcgtagacgccgccgccgccgc 355 |||||| ||||||||||||||||| Sbjct: 1156 ccgcgtcgacgccgccgccgccgc 1179
>ref|XM_209234.5| PREDICTED: Homo sapiens chromosome 1 open reading frame 167 (C1orf167), mRNA Length = 5317 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 gccgccgccgctggctcccg 364 |||||||||||||||||||| Sbjct: 1409 gccgccgccgctggctcccg 1390
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 acgccgccgccgccgctggc 359 |||||||||||||||||||| Sbjct: 30360887 acgccgccgccgccgctggc 30360868 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 gacgccgccgccgccgctggctcc 362 ||||||||||||||||| |||||| Sbjct: 20528485 gacgccgccgccgccgccggctcc 20528508
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctcccg 364 ||||||||||||||| |||||||| Sbjct: 26114019 cgccgccgccgccgccggctcccg 26114042 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 23783586 cgccgccgccgccgctggct 23783605
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acgccgccgccgccgctggc 359 |||||||||||||||||||| Sbjct: 1640216 acgccgccgccgccgctggc 1640235
>gb|AF243043.1|AF243043 Zea mays DNA cytosine methyltransferase MET2a (met2a) mRNA, complete cds Length = 2796 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acgccgccgccgccgctggc 359 |||||||||||||||||||| Sbjct: 404 acgccgccgccgccgctggc 423
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 332 ccgcgtagacgccgccgccgccgctggc 359 |||||| |||| |||||||||||||||| Sbjct: 1190113 ccgcgtcgacggcgccgccgccgctggc 1190086
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 101495 cgccgccgccgccgctggct 101514
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 339 gacgccgccgccgccgctggctcc 362 ||||||||||||||||| |||||| Sbjct: 125475 gacgccgccgccgccgcaggctcc 125452
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 131843 cgccgccgccgccgctggct 131862
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 8262 cgccgccgccgccgctggct 8281
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acgccgccgccgccgctggc 359 |||||||||||||||||||| Sbjct: 39716 acgccgccgccgccgctggc 39735
>dbj|AK107530.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G09, full insert sequence Length = 1204 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 gacgccgccgccgccgctggctcc 362 ||||||||||||||||| |||||| Sbjct: 275 gacgccgccgccgccgccggctcc 298
>dbj|AK102427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093F20, full insert sequence Length = 1884 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 gacgccgccgccgccgctggctcc 362 ||||||||||||||||| |||||| Sbjct: 389 gacgccgccgccgccgcaggctcc 412
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ccgccgccgctggctcccgg 365 |||||||||||||||||||| Sbjct: 1821072 ccgccgccgctggctcccgg 1821091
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggctcccg 364 ||||||||||||||| |||||||| Sbjct: 26432715 cgccgccgccgccgccggctcccg 26432738 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgccgccgccgccgctggct 360 |||||||||||||||||||| Sbjct: 24095255 cgccgccgccgccgctggct 24095274
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 acgccgccgccgccgctggc 359 |||||||||||||||||||| Sbjct: 110783 acgccgccgccgccgctggc 110764 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,730,171 Number of Sequences: 3902068 Number of extensions: 3730171 Number of successful extensions: 245964 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 235056 Number of HSP's gapped (non-prelim): 10846 length of query: 518 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 495 effective length of database: 17,143,297,704 effective search space: 8485932363480 effective search space used: 8485932363480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)