| Clone Name | baal34d09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finge... | 28 | 4.8 | 2 | TFR2_MOUSE (Q9JKX3) Transferrin receptor protein 2 (TfR2) | 28 | 6.3 | 3 | LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12) | 28 | 6.3 | 4 | SNAI_MOUSE (Q02085) Zinc finger protein SNAI1 (Protein snail hom... | 28 | 8.2 |
|---|
>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)| Length = 521 Score = 28.5 bits (62), Expect = 4.8 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = -1 Query: 176 HTPRPLEXGRKALRRPEPLLVNLASXKDEDGGRVGQRPLPDP 51 H PRP+ A R PEP A ++ GG R P P Sbjct: 322 HKPRPVPA---AARAPEPEAATRAEAREAAGGGSSDRDTPSP 360
>TFR2_MOUSE (Q9JKX3) Transferrin receptor protein 2 (TfR2)| Length = 798 Score = 28.1 bits (61), Expect = 6.3 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -1 Query: 140 LRRPEPLLVNLASXKDEDGGRVGQRPLPDPEAY 42 L+ P+P N D DG Q PL DPE Y Sbjct: 195 LQFPDPAHANTLHWVDADGSVQEQLPLEDPEVY 227
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 28.1 bits (61), Expect = 6.3 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = -1 Query: 236 LWSGCGCTIIREFXNIXITPHTPRPLEXGRKALR 135 LW G ++ E + I P T +P++ GR +++ Sbjct: 105 LWDMVGRNVVLELISTKIHPRTKKPMQSGRVSIK 138
>SNAI_MOUSE (Q02085) Zinc finger protein SNAI1 (Protein snail homolog) (Protein| sna) Length = 264 Score = 27.7 bits (60), Expect = 8.2 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = -1 Query: 134 RPEPLLVNLASXKDEDGGRVGQRPLPDPEAYVGAKAEAAQDL 9 R P V L S DED G+ Q P P A + +A L Sbjct: 80 RESPKAVELTSLSDEDSGKSSQPPSPPSPAPSSFSSTSASSL 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,751,310 Number of Sequences: 219361 Number of extensions: 596461 Number of successful extensions: 1647 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1623 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1647 length of database: 80,573,946 effective HSP length: 57 effective length of database: 68,070,369 effective search space used: 1633688856 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)