ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal34d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482325.1| Oryza sativa (japonica cultivar-group), mRNA 165 8e-38
2ref|XM_507227.1| PREDICTED Oryza sativa (japonica cultivar-group... 165 8e-38
3dbj|AK120820.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 8e-38
4dbj|AK099113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 8e-38
5dbj|AK067568.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 8e-38
6gb|AY108385.1| Zea mays PCO111603 mRNA sequence 139 5e-30
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 96 6e-17
8dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic D... 96 6e-17
9dbj|AK067656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 6e-17
10ref|XM_473882.1| Oryza sativa (japonica cultivar-group), predic... 52 8e-04
11emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4,... 52 8e-04
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 8e-04
13ref|NM_129069.2| Arabidopsis thaliana unknown protein AT2G35155 ... 46 0.051
14gb|AC149576.3| Medicago truncatula chromosome 2 BAC clone mte1-1... 46 0.051
15gb|AY150434.1| Arabidopsis thaliana unknown protein (At2g35155) ... 46 0.051
16gb|AY059774.1| Arabidopsis thaliana unknown protein (At2g35155) ... 46 0.051
17gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map... 46 0.051
18emb|BX819153.1|CNS0AA1W Arabidopsis thaliana Full-length cDNA Co... 46 0.051
19emb|BX820331.1|CNS0A9JI Arabidopsis thaliana Full-length cDNA Co... 46 0.051
20gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-1... 46 0.051
21gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 3.2
22gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosom... 40 3.2
23gb|AC148972.4| Mus musculus BAC clone RP24-82J4 from chromosome ... 40 3.2 
>ref|XM_482325.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2343

 Score =  165 bits (83), Expect = 8e-38
 Identities = 201/242 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccacagcaagatcctgcgccgcttcagccttggcaccgacataggcttccggatcagga 60
           |||||||||||||||| || ||||| || ||||| || |  |||||||| || |||| ||
Sbjct: 683 tccacagcaagatcctacgtcgctttagtcttggtacagcaataggctttcgaatcaaga 742

                                                                       
Query: 61  aggggacgttgaccgacacgcccgccatcctcgtctttgntgctcgcaaggttaacaaga 120
           |||| || ||||| || || || |||||||| || |||| |||||| |||||  ||| ||
Sbjct: 743 agggtacattgactgatactcctgccatccttgtttttgttgctcggaaggtgcacagga 802

                                                                       
Query: 121 agtggctcaggcctacgcagtgccttccggccgncctcgaggggcctgggggtgtgtggn 180
           |||||||||| ||||| ||||||||||||||   ||| ||||| || ||||| |||||| 
Sbjct: 803 agtggctcagccctacacagtgccttccggctcaccttgagggaccggggggagtgtggt 862

                                                                       
Query: 181 gtgatgncgatgttgntgaattctcgtattatggtgcacccgcacccactccaaaggaac 240
           |||||| |||||||| ||||||||| || ||||| ||||| ||||| |||||||||||||
Sbjct: 863 gtgatgtcgatgttgttgaattctcttactatggggcaccagcaccaactccaaaggaac 922

             
Query: 241 aa 242
           ||
Sbjct: 923 aa 924
to top
>ref|XM_507227.1| PREDICTED Oryza sativa (japonica cultivar-group), P0453D01.16-2
           mRNA
          Length = 2348

 Score =  165 bits (83), Expect = 8e-38
 Identities = 201/242 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccacagcaagatcctgcgccgcttcagccttggcaccgacataggcttccggatcagga 60
           |||||||||||||||| || ||||| || ||||| || |  |||||||| || |||| ||
Sbjct: 688 tccacagcaagatcctacgtcgctttagtcttggtacagcaataggctttcgaatcaaga 747

                                                                       
Query: 61  aggggacgttgaccgacacgcccgccatcctcgtctttgntgctcgcaaggttaacaaga 120
           |||| || ||||| || || || |||||||| || |||| |||||| |||||  ||| ||
Sbjct: 748 agggtacattgactgatactcctgccatccttgtttttgttgctcggaaggtgcacagga 807

                                                                       
Query: 121 agtggctcaggcctacgcagtgccttccggccgncctcgaggggcctgggggtgtgtggn 180
           |||||||||| ||||| ||||||||||||||   ||| ||||| || ||||| |||||| 
Sbjct: 808 agtggctcagccctacacagtgccttccggctcaccttgagggaccggggggagtgtggt 867

                                                                       
Query: 181 gtgatgncgatgttgntgaattctcgtattatggtgcacccgcacccactccaaaggaac 240
           |||||| |||||||| ||||||||| || ||||| ||||| ||||| |||||||||||||
Sbjct: 868 gtgatgtcgatgttgttgaattctcttactatggggcaccagcaccaactccaaaggaac 927

             
Query: 241 aa 242
           ||
Sbjct: 928 aa 929
to top
>dbj|AK120820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016N14, full
           insert sequence
          Length = 2353

 Score =  165 bits (83), Expect = 8e-38
 Identities = 201/242 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccacagcaagatcctgcgccgcttcagccttggcaccgacataggcttccggatcagga 60
           |||||||||||||||| || ||||| || ||||| || |  |||||||| || |||| ||
Sbjct: 683 tccacagcaagatcctacgtcgctttagtcttggtacagcaataggctttcgaatcaaga 742

                                                                       
Query: 61  aggggacgttgaccgacacgcccgccatcctcgtctttgntgctcgcaaggttaacaaga 120
           |||| || ||||| || || || |||||||| || |||| |||||| |||||  ||| ||
Sbjct: 743 agggtacattgactgatactcctgccatccttgtttttgttgctcggaaggtgcacagga 802

                                                                       
Query: 121 agtggctcaggcctacgcagtgccttccggccgncctcgaggggcctgggggtgtgtggn 180
           |||||||||| ||||| ||||||||||||||   ||| ||||| || ||||| |||||| 
Sbjct: 803 agtggctcagccctacacagtgccttccggctcaccttgagggaccggggggagtgtggt 862

                                                                       
Query: 181 gtgatgncgatgttgntgaattctcgtattatggtgcacccgcacccactccaaaggaac 240
           |||||| |||||||| ||||||||| || ||||| ||||| ||||| |||||||||||||
Sbjct: 863 gtgatgtcgatgttgttgaattctcttactatggggcaccagcaccaactccaaaggaac 922

             
Query: 241 aa 242
           ||
Sbjct: 923 aa 924
to top
>dbj|AK099113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D12, full
           insert sequence
          Length = 2343

 Score =  165 bits (83), Expect = 8e-38
 Identities = 201/242 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccacagcaagatcctgcgccgcttcagccttggcaccgacataggcttccggatcagga 60
           |||||||||||||||| || ||||| || ||||| || |  |||||||| || |||| ||
Sbjct: 683 tccacagcaagatcctacgtcgctttagtcttggtacagcaataggctttcgaatcaaga 742

                                                                       
Query: 61  aggggacgttgaccgacacgcccgccatcctcgtctttgntgctcgcaaggttaacaaga 120
           |||| || ||||| || || || |||||||| || |||| |||||| |||||  ||| ||
Sbjct: 743 agggtacattgactgatactcctgccatccttgtttttgttgctcggaaggtgcacagga 802

                                                                       
Query: 121 agtggctcaggcctacgcagtgccttccggccgncctcgaggggcctgggggtgtgtggn 180
           |||||||||| ||||| ||||||||||||||   ||| ||||| || ||||| |||||| 
Sbjct: 803 agtggctcagccctacacagtgccttccggctcaccttgagggaccggggggagtgtggt 862

                                                                       
Query: 181 gtgatgncgatgttgntgaattctcgtattatggtgcacccgcacccactccaaaggaac 240
           |||||| |||||||| ||||||||| || ||||| ||||| ||||| |||||||||||||
Sbjct: 863 gtgatgtcgatgttgttgaattctcttactatggggcaccagcaccaactccaaaggaac 922

             
Query: 241 aa 242
           ||
Sbjct: 923 aa 924
to top
>dbj|AK067568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111J10, full
           insert sequence
          Length = 2347

 Score =  165 bits (83), Expect = 8e-38
 Identities = 201/242 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccacagcaagatcctgcgccgcttcagccttggcaccgacataggcttccggatcagga 60
           |||||||||||||||| || ||||| || ||||| || |  |||||||| || |||| ||
Sbjct: 687 tccacagcaagatcctacgtcgctttagtcttggtacagcaataggctttcgaatcaaga 746

                                                                       
Query: 61  aggggacgttgaccgacacgcccgccatcctcgtctttgntgctcgcaaggttaacaaga 120
           |||| || ||||| || || || |||||||| || |||| |||||| |||||  ||| ||
Sbjct: 747 agggtacattgactgatactcctgccatccttgtttttgttgctcggaaggtgcacagga 806

                                                                       
Query: 121 agtggctcaggcctacgcagtgccttccggccgncctcgaggggcctgggggtgtgtggn 180
           |||||||||| ||||| ||||||||||||||   ||| ||||| || ||||| |||||| 
Sbjct: 807 agtggctcagccctacacagtgccttccggctcaccttgagggaccggggggagtgtggt 866

                                                                       
Query: 181 gtgatgncgatgttgntgaattctcgtattatggtgcacccgcacccactccaaaggaac 240
           |||||| |||||||| ||||||||| || ||||| ||||| ||||| |||||||||||||
Sbjct: 867 gtgatgtcgatgttgttgaattctcttactatggggcaccagcaccaactccaaaggaac 926

             
Query: 241 aa 242
           ||
Sbjct: 927 aa 928
to top
>gb|AY108385.1| Zea mays PCO111603 mRNA sequence
          Length = 1721

 Score =  139 bits (70), Expect = 5e-30
 Identities = 201/245 (82%), Gaps = 1/245 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccacagcaagatcctgcgccgcttcagccttggcaccgacataggcttccggatcagga 60
           |||||||||||||||| ||||| || || ||||| || |  ||||||||  | |||||||
Sbjct: 333 tccacagcaagatcctccgccggtttagtcttggtacagcaataggctttagaatcagga 392

                                                                       
Query: 61  aggggacgttgaccgacacgcccgccatcctcgtctttgntgctcgcaaggttaacaaga 120
           | || || ||||| ||||| || |||||||| || |||| |||||| |||||| ||| ||
Sbjct: 393 aaggaacattgactgacacacctgccatccttgtgtttgttgctcgaaaggttcacagga 452

                                                                       
Query: 121 a-gtggctcaggcctacgcagtgccttccggccgncctcgaggggcctgggggtgtgtgg 179
           | ||||||||| ||||| || || |||||  | | ||| ||||| |||||||||||||||
Sbjct: 453 aagtggctcagccctactcaatgtcttccaactgcccttgagggacctgggggtgtgtgg 512

                                                                       
Query: 180 ngtgatgncgatgttgntgaattctcgtattatggtgcacccgcacccactccaaaggaa 239
            ||||||  ||||||| |||||| || |||||||||||||| || || || |||||||||
Sbjct: 513 tgtgatgttgatgttgttgaattttcttattatggtgcaccagccccaacaccaaaggaa 572

                
Query: 240 caact 244
           |||||
Sbjct: 573 caact 577
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 125/151 (82%)
 Strand = Plus / Plus

                                                                            
Query: 1        tccacagcaagatcctgcgccgcttcagccttggcaccgacataggcttccggatcagga 60
                |||||||||||||||| || ||||| || ||||| || |  |||||||| || |||| ||
Sbjct: 19459514 tccacagcaagatcctacgtcgctttagtcttggtacagcaataggctttcgaatcaaga 19459573

                                                                            
Query: 61       aggggacgttgaccgacacgcccgccatcctcgtctttgntgctcgcaaggttaacaaga 120
                |||| || ||||| || || || |||||||| || |||| |||||| |||||  ||| ||
Sbjct: 19459574 agggtacattgactgatactcctgccatccttgtttttgttgctcggaaggtgcacagga 19459633

                                               
Query: 121      agtggctcaggcctacgcagtgccttccggc 151
                |||||||||| ||||| ||||||||||||||
Sbjct: 19459634 agtggctcagccctacacagtgccttccggc 19459664



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                            
Query: 168      gggggtgtgtggngtgatgncgatgttgntgaattctcgtattatggtgcacccgcaccc 227
                ||||| |||||| |||||| |||||||| ||||||||| || ||||| ||||| ||||| 
Sbjct: 19459757 gggggagtgtggtgtgatgtcgatgttgttgaattctcttactatggggcaccagcacca 19459816

                               
Query: 228      actccaaaggaacaa 242
                |||||||||||||||
Sbjct: 19459817 actccaaaggaacaa 19459831
to top
>dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0453D01
          Length = 147461

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 125/151 (82%)
 Strand = Plus / Plus

                                                                         
Query: 1     tccacagcaagatcctgcgccgcttcagccttggcaccgacataggcttccggatcagga 60
             |||||||||||||||| || ||||| || ||||| || |  |||||||| || |||| ||
Sbjct: 54271 tccacagcaagatcctacgtcgctttagtcttggtacagcaataggctttcgaatcaaga 54330

                                                                         
Query: 61    aggggacgttgaccgacacgcccgccatcctcgtctttgntgctcgcaaggttaacaaga 120
             |||| || ||||| || || || |||||||| || |||| |||||| |||||  ||| ||
Sbjct: 54331 agggtacattgactgatactcctgccatccttgtttttgttgctcggaaggtgcacagga 54390

                                            
Query: 121   agtggctcaggcctacgcagtgccttccggc 151
             |||||||||| ||||| ||||||||||||||
Sbjct: 54391 agtggctcagccctacacagtgccttccggc 54421



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                         
Query: 168   gggggtgtgtggngtgatgncgatgttgntgaattctcgtattatggtgcacccgcaccc 227
             ||||| |||||| |||||| |||||||| ||||||||| || ||||| ||||| ||||| 
Sbjct: 54514 gggggagtgtggtgtgatgtcgatgttgttgaattctcttactatggggcaccagcacca 54573

                            
Query: 228   actccaaaggaacaa 242
             |||||||||||||||
Sbjct: 54574 actccaaaggaacaa 54588
to top
>dbj|AK067656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114M11, full
            insert sequence
          Length = 3270

 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 125/151 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    tccacagcaagatcctgcgccgcttcagccttggcaccgacataggcttccggatcagga 60
            |||||||||||||||| || ||||| || ||||| || |  |||||||| || |||| ||
Sbjct: 1433 tccacagcaagatcctacgtcgctttagtcttggtacagcaataggctttcgaatcaaga 1492

                                                                        
Query: 61   aggggacgttgaccgacacgcccgccatcctcgtctttgntgctcgcaaggttaacaaga 120
            |||| || ||||| || || || |||||||| || |||| |||||| |||||  ||| ||
Sbjct: 1493 agggtacattgactgatactcctgccatccttgtttttgttgctcggaaggtgcacagga 1552

                                           
Query: 121  agtggctcaggcctacgcagtgccttccggc 151
            |||||||||| ||||| ||||||||||||||
Sbjct: 1553 agtggctcagccctacacagtgccttccggc 1583



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                        
Query: 168  gggggtgtgtggngtgatgncgatgttgntgaattctcgtattatggtgcacccgcaccc 227
            ||||| |||||| |||||| |||||||| ||||||||| || ||||| ||||| ||||| 
Sbjct: 1676 gggggagtgtggtgtgatgtcgatgttgttgaattctcttactatggggcaccagcacca 1735

                           
Query: 228  actccaaaggaacaa 242
            |||||||||||||||
Sbjct: 1736 actccaaaggaacaa 1750
to top
>ref|XM_473882.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1767

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 87  atcctcgtctttgntgctcgcaaggttaacaagaagtggct 127
           ||||| ||||||| ||||||||||||| | |||||||||||
Sbjct: 394 atccttgtctttgttgctcgcaaggttcataagaagtggct 434
to top
>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17,
             complete sequence
          Length = 133279

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 87    atcctcgtctttgntgctcgcaaggttaacaagaagtggct 127
             ||||| ||||||| ||||||||||||| | |||||||||||
Sbjct: 61312 atccttgtctttgttgctcgcaaggttcataagaagtggct 61352
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 87       atcctcgtctttgntgctcgcaaggttaacaagaagtggct 127
                ||||| ||||||| ||||||||||||| | |||||||||||
Sbjct: 31239710 atccttgtctttgttgctcgcaaggttcataagaagtggct 31239750
to top
>ref|NM_129069.2| Arabidopsis thaliana unknown protein AT2G35155 mRNA, complete cds
          Length = 2263

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 12  atcctgcgccgcttcagccttgg 34
           |||||||||||||||||||||||
Sbjct: 663 atcctgcgccgcttcagccttgg 685
to top
>gb|AC149576.3| Medicago truncatula chromosome 2 BAC clone mte1-17c12, complete
             sequence
          Length = 75005

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 189   gatgttgntgaattctcgtattatggtgcacccgcacccactccaaaggaacaa 242
             |||||||  || ||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 11103 gatgttgtggagttctcttattatggtgcaccggcaccaactcctaaagaacaa 11156
to top
>gb|AY150434.1| Arabidopsis thaliana unknown protein (At2g35155) mRNA, complete cds
          Length = 1771

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 12  atcctgcgccgcttcagccttgg 34
           |||||||||||||||||||||||
Sbjct: 355 atcctgcgccgcttcagccttgg 377
to top
>gb|AY059774.1| Arabidopsis thaliana unknown protein (At2g35155) mRNA, complete cds
          Length = 2220

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 12  atcctgcgccgcttcagccttgg 34
           |||||||||||||||||||||||
Sbjct: 603 atcctgcgccgcttcagccttgg 625
to top
>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete
             sequence
          Length = 91863

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 12    atcctgcgccgcttcagccttgg 34
             |||||||||||||||||||||||
Sbjct: 48578 atcctgcgccgcttcagccttgg 48600
to top
>emb|BX819153.1|CNS0AA1W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB51ZH12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 2163

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 12  atcctgcgccgcttcagccttgg 34
           |||||||||||||||||||||||
Sbjct: 663 atcctgcgccgcttcagccttgg 685
to top
>emb|BX820331.1|CNS0A9JI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH23ZE12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2040

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 12  atcctgcgccgcttcagccttgg 34
           |||||||||||||||||||||||
Sbjct: 508 atcctgcgccgcttcagccttgg 530
to top
>gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-138b18, complete
            sequence
          Length = 128810

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 189  gatgttgntgaattctcgtattatggtgcacccgcacccactccaaaggaacaa 242
            |||||||  || ||||| |||||||||||||| ||||| ||||| || ||||||
Sbjct: 2752 gatgttgtggagttctcttattatggtgcaccggcaccaactcctaaagaacaa 2699
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 119     gaagtggctcaggcctacgc 138
               ||||||||||||||||||||
Sbjct: 3235992 gaagtggctcaggcctacgc 3236011
to top
>gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosome 7, complete sequence
          Length = 210387

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   gaggggcctgggggtgtgtg 178
             ||||||||||||||||||||
Sbjct: 76205 gaggggcctgggggtgtgtg 76186
to top
>gb|AC148972.4| Mus musculus BAC clone RP24-82J4 from chromosome 7, complete sequence
          Length = 221912

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    gaggggcctgggggtgtgtg 178
              ||||||||||||||||||||
Sbjct: 133481 gaggggcctgggggtgtgtg 133462


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,223,411
Number of Sequences: 3902068
Number of extensions: 1223411
Number of successful extensions: 25985
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25926
Number of HSP's gapped (non-prelim): 58
length of query: 245
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 223
effective length of database: 17,147,199,772
effective search space: 3823825549156
effective search space used: 3823825549156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top