ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal34d07 |
|---|---|
| Clone Library Name | barley_pub |
>VA0D1_ARATH (Q9LJI5) Probable vacuolar ATP synthase subunit d 1 (EC 3.6.3.14)| (V-ATPase d subunit 1) (Vacuolar proton pump d subunit 1) Length = 351 Score = 354 bits (909), Expect(2) = 6e-99 Identities = 169/188 (89%), Positives = 183/188 (97%) Frame = +2 Query: 41 KHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLA 220 KHMLCQA EP+STFL+YI YGHMIDNVVLIVTGTLHERDV EL+EKCHPLGMFDSIA+LA Sbjct: 83 KHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHERDVQELIEKCHPLGMFDSIATLA 142 Query: 221 VAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGG 400 VAQNMRELYRLVLVDTPLAPYFSEC+TSEDLDDMNIEIMRNTLYKAYL+DFYKFC KLGG Sbjct: 143 VAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGG 202 Query: 401 ATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVD 580 ATA+IM +LL+FEADRRAVNITINSIGTELTR+DR+KLYSNFGLL+PYGHEELA+CED+D Sbjct: 203 ATAEIMSDLLAFEADRRAVNITINSIGTELTREDRKKLYSNFGLLYPYGHEELAICEDID 262 Query: 581 QVRGVMEK 604 QVRGVMEK Sbjct: 263 QVRGVMEK 270 Score = 26.6 bits (57), Expect(2) = 6e-99 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +3 Query: 3 IVEKCTLKLVDE 38 IVEKCTLKLVD+ Sbjct: 70 IVEKCTLKLVDD 81
>VA0D2_ARATH (Q9LHA4) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) Length = 351 Score = 352 bits (904), Expect(2) = 2e-98 Identities = 168/188 (89%), Positives = 182/188 (96%) Frame = +2 Query: 41 KHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLA 220 KHMLCQA EP+STFL+YI YGHMIDNVVLIVTGTLHERDV EL+EKCHPLGMFDSIA+LA Sbjct: 83 KHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHERDVQELIEKCHPLGMFDSIATLA 142 Query: 221 VAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGG 400 VAQNMRELYRLVLVDTPLAPYFSEC+TSEDLDDMNIEIMRNTLYKAYL+DFY FC KLGG Sbjct: 143 VAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEIMRNTLYKAYLEDFYNFCQKLGG 202 Query: 401 ATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVD 580 ATA+IM +LL+FEADRRAVNITINSIGTELTR+DR+KLYSNFGLL+PYGHEELA+CED+D Sbjct: 203 ATAEIMSDLLAFEADRRAVNITINSIGTELTREDRKKLYSNFGLLYPYGHEELAICEDID 262 Query: 581 QVRGVMEK 604 QVRGVMEK Sbjct: 263 QVRGVMEK 270 Score = 26.6 bits (57), Expect(2) = 2e-98 Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +3 Query: 3 IVEKCTLKLVDE 38 IVEKCTLKLVD+ Sbjct: 70 IVEKCTLKLVDD 81
>VA0D_DICDI (P54641) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa accessory protein) (DVA41) Length = 356 Score = 251 bits (642), Expect = 9e-67 Identities = 118/187 (63%), Positives = 153/187 (81%), Gaps = 1/187 (0%) Frame = +2 Query: 44 HMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAV 223 H+ QA EPLSTF+ +I+YG+MIDNVVL++TGTLHERD++EL++KCHPLG+F S+A+L+V Sbjct: 90 HIRNQAVEPLSTFMDFISYGYMIDNVVLLITGTLHERDISELVDKCHPLGLFKSMATLSV 149 Query: 224 AQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGA 403 N+ +LY VL+DTPLAPY C++ EDLD+MN EI+RNTLYKAYL+DFY +C LGG Sbjct: 150 VHNVADLYNNVLIDTPLAPYIQGCLSEEDLDEMNNEIIRNTLYKAYLEDFYNYCKYLGGQ 209 Query: 404 TADIMCNLLSFEADRRAVNITINSIG-TELTRDDRRKLYSNFGLLFPYGHEELAVCEDVD 580 T IM ++L FEADRR++NITINS G TEL++DDR KLY + GLL+P G +L EDVD Sbjct: 210 TELIMSDILKFEADRRSINITINSFGATELSKDDREKLYPSLGLLYPEGTSKLGKAEDVD 269 Query: 581 QVRGVME 601 QVRG++E Sbjct: 270 QVRGILE 276
>VA0D1_DROME (Q9W4P5) Vacuolar ATP synthase subunit d 1 (EC 3.6.3.14) (V-ATPase| d subunit 1) (Vacuolar proton pump d subunit 1) (V-ATPase 39 kDa subunit 1) Length = 350 Score = 244 bits (623), Expect = 1e-64 Identities = 113/187 (60%), Positives = 147/187 (78%) Frame = +2 Query: 41 KHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLA 220 +HM A EPLS FL +ITYG+MIDN++L++TGTLH+R ++EL+ KCHPLG F+ + ++ Sbjct: 82 QHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIH 141 Query: 221 VAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGG 400 VA ELY VLVDTPLAP+F +CI+ +DLD+MNIEI+RNTLYKAYL+ FY FC +GG Sbjct: 142 VASTPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYNFCKNMGG 201 Query: 401 ATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVD 580 ATAD+MC +L+FEADRRA+ ITINS GTEL++DDR KLY N G ++P G LA +D + Sbjct: 202 ATADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPNCGKMYPDGLAALARADDYE 261 Query: 581 QVRGVME 601 QV+ V E Sbjct: 262 QVKTVAE 268
>VA0D_MANSE (Q25531) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 40 kDa subunit) (M40) Length = 348 Score = 236 bits (603), Expect = 3e-62 Identities = 110/187 (58%), Positives = 145/187 (77%) Frame = +2 Query: 41 KHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLA 220 +H+ + EPLSTFL +ITY +MIDN++L++TGTLH+R ++EL+ KCHPLG F+ + ++ Sbjct: 80 QHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQMEAIH 139 Query: 221 VAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGG 400 VA ELY VLVDTPLAP+F +CI+ +DLD+MNIEI+RNTLYKAYL+ FY FC ++GG Sbjct: 140 VAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYDFCKQIGG 199 Query: 401 ATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVD 580 TAD+MC +L+FEADRRA+ ITINS GTEL++DDR KLY G L P G LA +D + Sbjct: 200 TTADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPRCGKLNPDGLAALARADDYE 259 Query: 581 QVRGVME 601 QV+ V E Sbjct: 260 QVKAVAE 266
>VA0D_PONPY (Q5R6I1) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) Length = 351 Score = 234 bits (596), Expect = 2e-61 Identities = 108/187 (57%), Positives = 144/187 (77%) Frame = +2 Query: 41 KHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLA 220 +HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + ++ Sbjct: 83 RHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVN 142 Query: 221 VAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGG 400 +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC LGG Sbjct: 143 IAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGG 202 Query: 401 ATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVD 580 TAD MC +L FEADRRA ITINS GTEL+++DR KL+ + G L+P G +LA +D + Sbjct: 203 TTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLARADDYE 262 Query: 581 QVRGVME 601 QV+ V + Sbjct: 263 QVKNVAD 269
>VA0D_MOUSE (P51863) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (Physophilin) Length = 351 Score = 234 bits (596), Expect = 2e-61 Identities = 108/187 (57%), Positives = 144/187 (77%) Frame = +2 Query: 41 KHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLA 220 +HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + ++ Sbjct: 83 RHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVN 142 Query: 221 VAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGG 400 +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC LGG Sbjct: 143 IAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGG 202 Query: 401 ATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVD 580 TAD MC +L FEADRRA ITINS GTEL+++DR KL+ + G L+P G +LA +D + Sbjct: 203 TTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLARADDYE 262 Query: 581 QVRGVME 601 QV+ V + Sbjct: 263 QVKNVAD 269
>VA0D_HUMAN (P61421) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 234 bits (596), Expect = 2e-61 Identities = 108/187 (57%), Positives = 144/187 (77%) Frame = +2 Query: 41 KHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLA 220 +HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + ++ Sbjct: 83 RHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVN 142 Query: 221 VAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGG 400 +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC LGG Sbjct: 143 IAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGG 202 Query: 401 ATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVD 580 TAD MC +L FEADRRA ITINS GTEL+++DR KL+ + G L+P G +LA +D + Sbjct: 203 TTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLARADDYE 262 Query: 581 QVRGVME 601 QV+ V + Sbjct: 263 QVKNVAD 269
>VA0D_BOVIN (P61420) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase AC39 subunit) (V-ATPase 40 kDa accessory protein) (P39) (32 kDa accessory protein) Length = 351 Score = 234 bits (596), Expect = 2e-61 Identities = 108/187 (57%), Positives = 144/187 (77%) Frame = +2 Query: 41 KHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLA 220 +HM A EPL++FL +ITY +MIDNV+L++TGTLH+R + EL+ KCHPLG F+ + ++ Sbjct: 83 RHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQMEAVN 142 Query: 221 VAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGG 400 +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI+RNTLYKAYL+ FYKFC LGG Sbjct: 143 IAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCTLLGG 202 Query: 401 ATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVD 580 TAD MC +L FEADRRA ITINS GTEL+++DR KL+ + G L+P G +LA +D + Sbjct: 203 TTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGRLYPEGLAQLARADDYE 262 Query: 581 QVRGVME 601 QV+ V + Sbjct: 263 QVKNVAD 269
>VA0D_SCHPO (O13753) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 343 Score = 223 bits (567), Expect = 4e-58 Identities = 99/177 (55%), Positives = 141/177 (79%) Frame = +2 Query: 56 QANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNM 235 QA+E LS F+ YITY +MIDN++L++TGT++ +D ++LLE+CHPLG F+++ +L VA N+ Sbjct: 84 QADETLSKFMDYITYAYMIDNIMLLLTGTVNGQDTHDLLERCHPLGWFETLPALCVATNV 143 Query: 236 RELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADI 415 ELY +VL++TPLAPYF +C++++DLD+ +IEI+RNTLYKAYL+DFY FC K+G TAD Sbjct: 144 EELYSVVLIETPLAPYFKDCLSADDLDEQHIEIIRNTLYKAYLEDFYNFCKKIGACTADT 203 Query: 416 MCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVDQV 586 M +L FEADRRA+ ITINS GTEL++++R K+Y +FG L+P+ LA E+ V Sbjct: 204 MLPILEFEADRRAITITINSFGTELSKEERAKMYPSFGRLYPFSTSILARAENAGDV 260
>VA0D_NEUCR (P53659) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 kDa subunit) Length = 364 Score = 213 bits (543), Expect = 3e-55 Identities = 103/191 (53%), Positives = 139/191 (72%), Gaps = 4/191 (2%) Frame = +2 Query: 41 KHMLCQANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLA 220 +++ A L+ F+ Y+TYG+MIDNV L++TGTLHERD ELLE+CHPLG F+++ L Sbjct: 79 RYVRANAAGSLAKFMDYLTYGYMIDNVALLITGTLHERDTRELLERCHPLGWFETMPVLC 138 Query: 221 VAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFC----A 388 VA N+ ELY V+++TPLAPYF ++ +DLD++NIEI+RNTLYK YL+DFY F Sbjct: 139 VATNIEELYNSVMIETPLAPYFKSSLSLQDLDELNIEIVRNTLYKNYLEDFYHFVNTHPD 198 Query: 389 KLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVC 568 G TA++M LL FEADRRA+NIT+NS GTEL++ DR+KLY NFG L+P G L+ Sbjct: 199 MAGTPTAEVMSELLEFEADRRAINITLNSFGTELSKADRKKLYPNFGQLYPEGTLMLSRA 258 Query: 569 EDVDQVRGVME 601 +D + VR +E Sbjct: 259 DDFEGVRLAVE 269
>VA0D_YEAST (P32366) Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d| subunit) (Vacuolar proton pump d subunit) (V-ATPase 39 kDa subunit) (V-ATPase subunit M39) Length = 345 Score = 183 bits (465), Expect = 3e-46 Identities = 91/184 (49%), Positives = 127/184 (69%), Gaps = 3/184 (1%) Frame = +2 Query: 56 QANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNM 235 Q++ F+ YITYG+MIDNV L++TGT+H+RD E+L++CHPLG FD++ +L+VA ++ Sbjct: 86 QSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKGEILQRCHPLGWFDTLPTLSVATDL 145 Query: 236 RELYRLVLVDTPLAPYFSECI-TSEDLDDMNIEIMRNTLYKAYLQDFYKFCA-KLGGATA 409 LY VLVDTPLAPYF C T+E+LDDMNIEI+RN LYKAYL+DFY F ++ Sbjct: 146 ESLYETVLVDTPLAPYFKNCFDTAEELDDMNIEIIRNKLYKAYLEDFYNFVTEEIPEPAK 205 Query: 410 DIMCNLLSFEADRRAVNITINSI-GTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVDQV 586 + M LL FEADRR++NI +NS+ +++ D + L N G L+P LA +D + V Sbjct: 206 ECMQTLLGFEADRRSINIALNSLQSSDIDPDLKSDLLPNIGKLYPLATFHLAQAQDFEGV 265 Query: 587 RGVM 598 R + Sbjct: 266 RAAL 269
>VA0D2_DROME (Q9VCQ3) Probable vacuolar ATP synthase subunit d 2 (EC 3.6.3.14)| (V-ATPase d subunit 2) (Vacuolar proton pump d subunit 2) (V-ATPase 39 kDa subunit 2) Length = 350 Score = 164 bits (415), Expect = 2e-40 Identities = 77/179 (43%), Positives = 117/179 (65%) Frame = +2 Query: 59 ANEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMR 238 + EPL+TF+++I Y MIDNV L+V G + R + LL CHPLG FD + ++ VA N Sbjct: 85 STEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKRLLRMCHPLGEFDQLGAIEVASNSA 144 Query: 239 ELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIM 418 EL+ VL+DTP+A + + E L +++EI+R LY+AYL+ FY +C++LGG TA++M Sbjct: 145 ELFDAVLIDTPIARFVPRDLPMESLRYLDVEIVRAHLYRAYLEKFYAYCSQLGGNTANVM 204 Query: 419 CNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGV 595 NLLSFEADRR + I +N+IG+++ +R K++ G L ++ D D++R V Sbjct: 205 TNLLSFEADRRTITIAVNAIGSDIIPKERLKMFPTCGYLPKIALASMSTLNDTDKIRDV 263
>DXR_BLOFL (Q7VRE2) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 391 Score = 31.2 bits (69), Expect = 2.4 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 5/123 (4%) Frame = +2 Query: 125 LIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSECITS 304 L+++G L +V + PL DS + A+ QN+ +Y+ L L+ Y CI Sbjct: 113 LVLSGQLFMTEVYKYNASVLPL---DSEYN-AIFQNLSVIYQKKLGQVSLSQYGICCIVL 168 Query: 305 EDLDDMNIEIMRNTLYK-----AYLQDFYKFCAKLGGATADIMCNLLSFEADRRAVNITI 469 D + +I R L+K Y+ + K+ +A +M +L + N++ Sbjct: 169 TDSGGVLYKITRTKLFKITPVQVYIHPNWSMGLKISVNSATVMNRVLEYIEAHHLFNVSS 228 Query: 470 NSI 478 N I Sbjct: 229 NEI 231
>VATC_PYRHO (O57726) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 370 Score = 30.4 bits (67), Expect = 4.2 Identities = 27/136 (19%), Positives = 58/136 (42%) Frame = +2 Query: 194 MFDSIASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLQDF 373 MF + ++ ++ M E+ LV+++ + E + L +++++ LYK Y Sbjct: 153 MFPKVKAMVESKTMEEI--LVILE---GTEYEEPLRKLLLKEIDLQAFELELYKIYYSKL 207 Query: 374 YKFCAKLGGATADIMCNLLSFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLFPYGHE 553 K+ + G I + D R ++I + + + + ++ + L G+L E Sbjct: 208 LKYASSRKGEEKLISEEFIKMLIDYRNISIILRAKLSGMPSEEIKSLLIPGGMLSRAVLE 267 Query: 554 ELAVCEDVDQVRGVME 601 + EDV G +E Sbjct: 268 SMLSSEDVMMALGELE 283
>VATC_PYRAB (Q9UXU5) V-type ATP synthase subunit C (EC 3.6.3.14) (V-type ATPase| subunit C) Length = 370 Score = 30.0 bits (66), Expect = 5.4 Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 1/165 (0%) Frame = +2 Query: 110 IDNVVLIVTGTLHERDVNELLEKCHPLG-MFDSIASLAVAQNMRELYRLVLVDTPLAPYF 286 + N++ +V L + + P G M + ++A A+ M E+ LV+++ + Sbjct: 127 VRNIINVVKAKLSNMPPQDFIM---PAGKMLQKVKAMAEAKTMEEM--LVILE---GTDY 178 Query: 287 SECITSEDLDDMNIEIMRNTLYKAYLQDFYKFCAKLGGATADIMCNLLSFEADRRAVNIT 466 E + L+++ ++ LYK + ++ G I ++ D ++ Sbjct: 179 EEPLRRLLLNEITLQEFELELYKVHYSKLLRYVNSRKGEEKIIASEFVNMLIDYTNISTL 238 Query: 467 INSIGTELTRDDRRKLYSNFGLLFPYGHEELAVCEDVDQVRGVME 601 + + + L ++D RKL G L E + EDV G +E Sbjct: 239 LRAKLSSLAQEDIRKLIIPGGTLSKSTIEAMINSEDVVMALGELE 283
>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc Length = 793 Score = 29.6 bits (65), Expect = 7.1 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Frame = -2 Query: 389 SHKICKNPEDTLCRVCSS*SQYSCH-------PDPQM*CTLRSTVLRVYQLEP 252 S K CK+ + LCRVC +CH PD Q+ C +Y L+P Sbjct: 301 SCKHCKDDVNRLCRVC------ACHLCGGRQDPDKQLMCDECDMAFHIYCLDP 347
>TERT_YEAST (Q06163) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) Length = 884 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 10/64 (15%) Frame = -3 Query: 247 VKLTHILSNCKRC----------NAIKHAQWMAFLQQFIDISFMQCPSNNKDNIIDHVSI 98 +++ H++ N C N ++ Q+ +FLQ+ I+++ CP D +I++ + Sbjct: 781 MQIDHVVKNISECYKSAFKDLSINVTQNMQFHSFLQRIIEMTVSGCPITKCDPLIEY-EV 839 Query: 97 RYVL 86 R+ + Sbjct: 840 RFTI 843
>NU4M_ARTSA (P19046) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) (Fragment) Length = 71 Score = 29.3 bits (64), Expect = 9.3 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 543 YGNNRPKLEYSFLRSSLVSSVPILFIVMFT 454 Y R Y FL +L+SS+P+LFI+M T Sbjct: 37 YQPERLPASYYFLFYTLLSSLPLLFIIMLT 66
>TGT_HELHP (Q7VHX2) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 381 Score = 29.3 bits (64), Expect = 9.3 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Frame = +2 Query: 113 DNVVLIVTGTLHERDVNELLEKCHPLGMFD--SIASLAVAQNMRELYRLVLVDTPLAP 280 +N+ I+ G ++E ++ +G FD +I LAV + ++Y+ + TPL P Sbjct: 186 NNLFAIIQGGVNEHFRTLCAKQLVDMGDFDGFAIGGLAVGETSEQMYKTISFTTPLMP 243
>AROA_STRMU (Q8DUV8) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +2 Query: 113 DNVVLIVTGTLHERDVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSE 292 D +++ LH VN + H +GM +IA+L V + EL R ++T +FS+ Sbjct: 363 DGMIIEGKTNLHGAKVNTFGD--HRIGMMTAIAALLVKEGEVELERAEAINTSYPTFFSD 420 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,302,811 Number of Sequences: 219361 Number of extensions: 1700213 Number of successful extensions: 4220 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 4074 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4214 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
