ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal34d05 |
|---|---|
| Clone Library Name | barley_pub |
>MUC13_RAT (P97881) Mucin-13 precursor| Length = 547 Score = 33.5 bits (75), Expect = 0.58 Identities = 37/154 (24%), Positives = 52/154 (33%), Gaps = 1/154 (0%) Frame = +2 Query: 179 TTSLNPNAVEF-VPSCLRCVSDASNRSDTTKIPVSESSKEISADQPESVPSNPDEEAHRY 355 TT+ P + P + +S S + T P S S++ Q S S P A Sbjct: 13 TTATQPTSTSTQTPGTTQLLSTTSTPTTTATQPTSTSTQTPGTTQLPSTTSTPTTTAT-- 70 Query: 356 WQQQLPDDITPDFNVLGQDETPGPDSLSLTGLSMNDGFGASLFSPNQTSRMQHHASPFVR 535 Q TP G + PG S T + S +P T ++P Sbjct: 71 -QPTXTSTQTP-----GTTQLPGTTSTPTT--TATQPTSTSFQTPGTTQLPSSTSTPTTT 122 Query: 536 DTLSTRGKFEFPGQEQQQATIMSPTASTMSPTAA 637 T T + PG Q SPT + PT + Sbjct: 123 ATQPTSTASQTPGTTQPPGGASSPTTTVTQPTGS 156
>NCOA2_XENLA (Q9W705) Nuclear receptor coactivator 2 (NCoA-2) (Transcriptional| intermediary factor 2) (xTIF2) Length = 1516 Score = 32.7 bits (73), Expect = 0.99 Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 11/124 (8%) Frame = +2 Query: 269 IPVSESSKEISADQPESVPSNPDEEAHRYWQQQLPDDITPDFNVLGQDETPGPDSLSLTG 448 IP S +S I + P P+ + +P P F P P S SL+ Sbjct: 1296 IPASINSPRIPQGSTQQFPFPPN------YGTGIPSP--PPFTSPFSPVPPSPGSQSLSH 1347 Query: 449 LSM--------NDGFGASL---FSPNQTSRMQHHASPFVRDTLSTRGKFEFPGQEQQQAT 595 S+ N G S+ + P +MQH+A F +S + F G Q+ Sbjct: 1348 SSLHGSQMNLANQGIMGSMGGQYGPVMNPQMQHNAFQFANSGMSQQSDPGFTGATTPQSP 1407 Query: 596 IMSP 607 IMSP Sbjct: 1408 IMSP 1411
>I12R2_PIG (Q8MJS1) Interleukin-12 receptor beta-2 chain precursor (IL-12 beta2| receptor) (IL-12Rbeta2) Length = 861 Score = 32.3 bits (72), Expect = 1.3 Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 2/129 (1%) Frame = +2 Query: 221 CLRCVSDASNRSDTTKIPVSESSKEISADQPESVPSNPDEEAHRYWQQQLPDDITPDFNV 400 C R + D +N + K P+ E K++S D+ + P+E + LP +TP F Sbjct: 662 CSREIPDPANSTWAKKYPIVEEKKQLSLDRLLADWPTPEEPEPLVINEVLP-QVTPVFRR 720 Query: 401 LGQDETPGPDSLSLTGLSMNDGFGASLFSPNQTSRMQHHASPFV--RDTLSTRGKFEFPG 574 PG + + G+S SP + P V L +R PG Sbjct: 721 PHHPNWPGKGQRLQGRHASEEDTGSSASSPPPPRALTAETGPAVDLYKVLGSRRPDSKPG 780 Query: 575 QEQQQATIM 601 T++ Sbjct: 781 NPVSHLTVL 789
>HM30_CAEEL (Q22909) Homeobox protein ceh-30| Length = 299 Score = 31.6 bits (70), Expect = 2.2 Identities = 28/119 (23%), Positives = 51/119 (42%) Frame = +2 Query: 158 KISLINRTTSLNPNAVEFVPSCLRCVSDASNRSDTTKIPVSESSKEISADQPESVPSNPD 337 K+SL++ L P A P+ ++ A++ S KI S SS IS + + +P+ Sbjct: 62 KMSLLDPRQFLLP-AFYLDPTTQALLAQAASTSPCNKIS-SSSSFRIS----DILEQSPN 115 Query: 338 EEAHRYWQQQLPDDITPDFNVLGQDETPGPDSLSLTGLSMNDGFGASLFSPNQTSRMQH 514 +H P I DF+ + +PG D + G ++F+ Q +++ Sbjct: 116 NSSHSNDHDPSPQSIKSDFSTSPRASSPGGDRMGSPGSCKKSRKARTIFTDKQLQELEN 174
>PPNK_VIBCH (Q9KTP8) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 294 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Frame = +2 Query: 197 NAVEFVP------SCLRCVSDASNRSDTTKIPVSESSKEISADQPESVPSNPDEEAHRY 355 NA+ VP SC V + R P + ++E+S D S+P +P +E H Y Sbjct: 205 NAITLVPMFPHTLSCRPLVVGGNQRIKLVVSPENRGTQEVSCDGQVSLPVSPGDEIHIY 263
>PACC_YARLI (P78978) pH-response transcription factor pacC/RIM101| Length = 585 Score = 31.2 bits (69), Expect = 2.9 Identities = 25/98 (25%), Positives = 42/98 (42%) Frame = +2 Query: 347 HRYWQQQLPDDITPDFNVLGQDETPGPDSLSLTGLSMNDGFGASLFSPNQTSRMQHHASP 526 +RY Q Q+ + P + +G TP + + F + +R+ + S Sbjct: 278 YRYSQPQVQVPMVPSYAAVGHMPTPPMHPHAPIDRKRQWDTTSDFFDDIKRARVTPNYSS 337 Query: 527 FVRDTLSTRGKFEFPGQEQQQATIMSPTASTMSPTAAP 640 + LST ++ +QQQA+ TA+T S T AP Sbjct: 338 DIASRLSTIEQYIGIQGQQQQASPTPQTATTTSATPAP 375
>FTSK_STRAW (Q82K93) DNA translocase ftsK| Length = 905 Score = 31.2 bits (69), Expect = 2.9 Identities = 36/135 (26%), Positives = 54/135 (40%) Frame = +2 Query: 251 RSDTTKIPVSESSKEISADQPESVPSNPDEEAHRYWQQQLPDDITPDFNVLGQDETPGPD 430 R+ K P E+SK D ++ P+ + R Q QL DIT L E GP Sbjct: 373 RAKAVKPPRKEASKAGVPDLTKAPPAETRDLPARAEQLQLSGDITYSLPSLDLLERGGPG 432 Query: 431 SLSLTGLSMNDGFGASLFSPNQTSRMQHHASPFVRDTLSTRGKFEFPGQEQQQATIMSPT 610 T + ND ASL + ++ + F R TR + E G + I + T Sbjct: 433 K---TRSAANDAVVASLSNVFMEFKVDAAVTGFTRGPTVTRYEVEL-GPAVKVERITALT 488 Query: 611 ASTMSPTAAPWVKTV 655 + A+P V+ + Sbjct: 489 KNIAYAVASPDVRII 503
>CENPC_HUMAN (Q03188) Centromere protein C 1 (CENP-C) (Centromere autoantigen C)| Length = 943 Score = 30.8 bits (68), Expect = 3.7 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 2/99 (2%) Frame = +2 Query: 173 NRTTSLNPNAVEFVPSCLRCVSDASNRSDTTKIPVSESSKEISAD--QPESVPSNPDEEA 346 N T S+ + + +C++ S +S +PVS KE S S +N +A Sbjct: 54 NSTKSVPNSTRKIKDTCIQSPSKECQKSHPKSVPVSSKKKEASLQFVVEPSEATNRSVQA 113 Query: 347 HRYWQQQLPDDITPDFNVLGQDETPGPDSLSLTGLSMND 463 H Q+ L D++ PDS ++ ++ND Sbjct: 114 HEVHQKILATDVS---------SKNTPDSKKISSRNIND 143
>AMDR_ASPFU (Q4WK35) Acetamidase regulatory protein| Length = 772 Score = 30.4 bits (67), Expect = 4.9 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = +2 Query: 224 LRCVSDASNRSDTTKIPVSESSKEISA--DQPESVPSNPDEEAHRYWQQQLPDDITPDFN 397 LR D+ ++ SE S+ S+ DQP++ + ++ H++ P Sbjct: 611 LRLFEDSKRLQKDLRLATSERSRPFSSTQDQPQAQALDQNKNQHQHSSADAPVQPPQPDR 670 Query: 398 VLGQDETPGPDSLSL 442 +L ++P PDS SL Sbjct: 671 LLPSYDSPTPDSTSL 685
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 30.4 bits (67), Expect = 4.9 Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 18/180 (10%) Frame = +2 Query: 170 INRTTSLNPNAVEFVPSCLRCVSDASNRSDTTKI----PVSESSKEISADQPESVPSNPD 337 I+ + +N + + SC + ++ S + I P + + A P+ P P Sbjct: 3539 ISANSVINLDLSNVISSCSNTSAASATASASASISFGSPTASQNAMPQASTPKQGPITPQ 3598 Query: 338 EEAHRYW----------QQQLPDDITPDFNVLGQDETPGPDSLSLTGLSMNDGFGASLFS 487 + +Q P P + Q P + G+ + L S Sbjct: 3599 QAIRTQSLIMQPPTISIPEQTPHFAVPQMVLSPQSHHPQQPGTYMVGIRAPSPH-SPLHS 3657 Query: 488 PNQ---TSRMQHHASPFVRDTLSTRGKFEFPGQEQQQ-ATIMSPTASTMSPTAAPWVKTV 655 P + SR+ SP R +S + Q QQQ A I SP +S +SP A+P + + Sbjct: 3658 PGRGVAQSRLVGQLSPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVL 3717
>AXN_DROME (Q9V407) Axin (Axis inhibition protein) (dAxin) (d-Axin)| Length = 745 Score = 30.4 bits (67), Expect = 4.9 Identities = 24/91 (26%), Positives = 36/91 (39%) Frame = +2 Query: 101 LNSAELLHLLISKMSIEERKISLINRTTSLNPNAVEFVPSCLRCVSDASNRSDTTKIPVS 280 L EL+ LLI K+ +RK L R NP A + RS + + Sbjct: 434 LKEEELVSLLIPKLEEVKRKRDLEERARERNPGAALL----------TNERSSASDRAFA 483 Query: 281 ESSKEISADQPESVPSNPDEEAHRYWQQQLP 373 E+ +E A ++ D+ R W+ Q P Sbjct: 484 EAIREKFALDEDNDQDILDQHVSRVWKDQTP 514
>R1AB_PEDV7 (Q91AV2) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; Unknown protein 1; 3C-like Length = 6781 Score = 30.0 bits (66), Expect = 6.4 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%) Frame = -2 Query: 390 SGVISSGSCCCQYRCASSSGLLGTDSGWSALISFEDSETGILVVSDLFEASLTHLRHEGT 211 SGV G+C C + SGL GT A+ +++ G++ + L+ H ++ Sbjct: 2648 SGVADKGACIFNSACTTLSGLGGT-----AVYCYKN---GLVEGAKLYSELAPHSYYKMV 2699 Query: 210 NSTALGFNEVV---LFIKLIFLSSMDILLMSRCSNSAE 106 + A+ E++ I+ I +M + +C SAE Sbjct: 2700 DGNAVSLPEIISRGFGIRTIRTKAMTYCRVGQCVQSAE 2737
>CG021_MOUSE (Q9JMG3) Protein C7orf21 homolog| Length = 245 Score = 30.0 bits (66), Expect = 6.4 Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 6/110 (5%) Frame = +2 Query: 275 VSESSKEISADQPE----SVPSNPDE--EAHRYWQQQLPDDITPDFNVLGQDETPGPDSL 436 VS + E + QP+ + P+ P E A +++ P +P G P PD+ Sbjct: 29 VSTHTTESTDPQPQPPGTTTPAQPSEAMSASDSIREEAPGAESPSLRHRGPSAQPEPDTG 88 Query: 437 SLTGLSMNDGFGASLFSPNQTSRMQHHASPFVRDTLSTRGKFEFPGQEQQ 586 + L + + A + +DT+ + + +FPGQEQQ Sbjct: 89 VTASTPPDSPQEPLLLRLKFLNDSEQVARAWPQDTIGSLKRTQFPGQEQQ 138
>TPR1_SCHPO (O42668) Tetratricopeptide repeat protein 1| Length = 1039 Score = 30.0 bits (66), Expect = 6.4 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = +2 Query: 233 VSDASNRSDTTKIPVSESSKEISADQPESVPSNPDEEAHRYWQQQLPDDIT 385 +SDA N++ ++ S+E + DQ N +EE R +++ +DIT Sbjct: 971 LSDARNKTKKRRVNRRVISEEYTFDQDSDAEGNQEEEVSRTIEEKQDNDIT 1021
>PPNK_VIBVY (Q7MN93) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 294 Score = 29.6 bits (65), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Frame = +2 Query: 197 NAVEFVP------SCLRCVSDASNRSDTTKIPVSESSKEISADQPESVPSNPDEEAHRY 355 NA+ VP S V D + R P + ++E+S D S+P +P +E H Y Sbjct: 205 NAISLVPMFPHTLSSRPLVVDGNRRIKLLVSPDNRGTQEVSCDGQVSLPVSPGDEIHIY 263
>PPNK_VIBVU (Q8DF58) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 294 Score = 29.6 bits (65), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%) Frame = +2 Query: 197 NAVEFVP------SCLRCVSDASNRSDTTKIPVSESSKEISADQPESVPSNPDEEAHRY 355 NA+ VP S V D + R P + ++E+S D S+P +P +E H Y Sbjct: 205 NAISLVPMFPHTLSSRPLVVDGNRRIKLLVSPDNRGTQEVSCDGQVSLPVSPGDEIHIY 263
>PPNK_VIBPA (Q87RX6) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 294 Score = 29.6 bits (65), Expect = 8.3 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 6/59 (10%) Frame = +2 Query: 197 NAVEFVP------SCLRCVSDASNRSDTTKIPVSESSKEISADQPESVPSNPDEEAHRY 355 NA+ VP S V D R P + ++E+S D S+P +P +E H Y Sbjct: 205 NAISLVPMFPHTLSSRPLVVDGKRRIKLIVSPENRGTQEVSCDGQVSLPVSPGDEIHIY 263
>FEOB1_PORGI (Q7MV19) Ferrous iron transport protein B| Length = 844 Score = 29.6 bits (65), Expect = 8.3 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +2 Query: 254 SDTTKIPVSESSKEISA--DQPESVPSNPDEEAHRYWQQQLPDDITPDFNVL 403 S+ T P S E SA D ES+P+NP E+ + ++ ++ P+ +V+ Sbjct: 76 SNATSSPASNDIGEQSANPDSNESIPTNPTEDISAKTKSEIEIEVKPNGHVI 127
>YN83_CAEEL (Q03609) Hypothetical protein ZC84.3| Length = 826 Score = 29.6 bits (65), Expect = 8.3 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 4/54 (7%) Frame = +2 Query: 101 LNSAELLHLLISKMSIEE---RKISLINRTTSLNPNAVEFVPSCL-RCVSDASN 250 L++ H+ IS +S ++ +K+ I TSLNP ++ + +CL R +SDASN Sbjct: 280 LSAGSKAHMNISAISEKKEGIKKLLPIVADTSLNPIEIKNIGNCLNRLLSDASN 333
>MYOJ_DICDI (P54697) Myosin IJ heavy chain| Length = 2245 Score = 29.6 bits (65), Expect = 8.3 Identities = 23/80 (28%), Positives = 37/80 (46%) Frame = +2 Query: 113 ELLHLLISKMSIEERKISLINRTTSLNPNAVEFVPSCLRCVSDASNRSDTTKIPVSESSK 292 EL + SK S+E+ K SLI + T++ + + + VS + T K + E +K Sbjct: 1285 ELERIKQSKQSVEDEKNSLITQLTTVKFESTQVSTN----VSHQKEKITTLKSTIEELNK 1340 Query: 293 EISADQPESVPSNPDEEAHR 352 I Q E N D+E + Sbjct: 1341 SIGKLQAEQ--KNKDDEIRK 1358 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,647,003 Number of Sequences: 219361 Number of extensions: 1818055 Number of successful extensions: 6390 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 6091 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6379 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
