ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal34d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_470539.1| Oryza sativa (japonica cultivar-group), predic... 268 2e-68
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 268 2e-68
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
4gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 268 2e-68
5dbj|AK070967.1| Oryza sativa (japonica cultivar-group) cDNA clon... 268 2e-68
6gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome... 268 2e-68
7dbj|AK068487.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 5e-60
8emb|AL355304.12| Human DNA sequence from clone RP11-439L18 on ch... 42 2.3
9emb|AL158205.12| Human DNA sequence from clone RP11-177F4 on chr... 42 2.3
10gb|AF011889.1|AF011889 Human Xq28 cosmids U126G1, U142F2, U69B6,... 42 2.3
11emb|AL844854.6| Mouse DNA sequence from clone RP23-368I1 on chro... 42 2.3
12gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
13gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, co... 40 9.0
14gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Canc... 40 9.0
15gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, compl... 40 9.0
16gb|AC092637.2| Homo sapiens BAC clone RP11-358M3 from 7, complet... 40 9.0
17emb|Z95329.1|HS522O2 Human DNA sequence from clone RP3-522O2 on ... 40 9.0
18emb|AL596184.9| Human DNA sequence from clone CTD-2552G1 on chro... 40 9.0
19emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chro... 40 9.0
20emb|AL449403.11| Human DNA sequence from clone RP11-569G13 on ch... 40 9.0
21emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 o... 40 9.0
22emb|BX120000.8| Zebrafish DNA sequence from clone CH211-214C13 i... 40 9.0
23gb|AC155328.5| Mus musculus 6 BAC RP24-75K10 (Roswell Park Cance... 40 9.0
24gb|AC073650.44| Homo sapiens 12 BAC RP11-44F24 (Roswell Park Can... 40 9.0
25gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, com... 40 9.0
26emb|AL845457.16| Mouse DNA sequence from clone RP23-34E24 on chr... 40 9.0
27gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, comple... 40 9.0
28gb|AC138306.4| Mus musculus BAC clone RP24-240E9 from 16, comple... 40 9.0
29gb|AC154781.2| Mus musculus BAC clone RP24-463K5 from 16, comple... 40 9.0
30gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, co... 40 9.0
31gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
32gb|AC163743.6| Mus musculus BAC clone RP23-415J4 from chromosome... 40 9.0
33gb|J03639.1|HUMDBLTP Human DBL oncogene encoding a transforming ... 40 9.0

>ref|XM_470539.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1746

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                       
Query: 140 atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 199
           |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 205 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 264

                                                                       
Query: 200 gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 259
           ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 265 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 324

                                                                       
Query: 260 acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 319
           ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 325 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 384

                                                                       
Query: 320 gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 376
           ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 385 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 444

                                                                       
Query: 377 gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 436
           ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 445 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 504

                                                                       
Query: 437 tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 496
           |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 505 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 564

                                                                    
Query: 497 acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 553
           ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 565 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 621



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                       
Query: 589 agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 648
           |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 669 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 728

                       
Query: 649 gacagtaagaaa 660
            |||||||||||
Sbjct: 729 aacagtaagaaa 740



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                           
Query: 140     atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 199
               |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 4187226 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 4187285

                                                                           
Query: 200     gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 259
               ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 4187286 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 4187345

                                                                           
Query: 260     acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 319
               ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 4187346 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 4187405

                                                                           
Query: 320     gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 376
               ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 4187406 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 4187465

                                                                           
Query: 377     gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 436
               ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 4187466 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 4187525

                                                                           
Query: 437     tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 496
               |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 4187526 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 4187585

                                                                        
Query: 497     acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 553
               ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 4187586 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 4187642



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                           
Query: 589     agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 648
               |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 4187690 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 4187749

                           
Query: 649     gacagtaagaaa 660
                |||||||||||
Sbjct: 4187750 aacagtaagaaa 4187761



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                           
Query: 140     atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 199
               |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 4187335 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 4187394

                                                                           
Query: 200     gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 259
               ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 4187395 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 4187454

                                                                           
Query: 260     acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 319
               ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 4187455 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 4187514

                                                                           
Query: 320     gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 376
               ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 4187515 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 4187574

                                                                           
Query: 377     gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 436
               ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 4187575 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 4187634

                                                                           
Query: 437     tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 496
               |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 4187635 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 4187694

                                                                        
Query: 497     acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 553
               ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 4187695 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 4187751



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                           
Query: 589     agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 648
               |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 4187799 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 4187858

                           
Query: 649     gacagtaagaaa 660
                |||||||||||
Sbjct: 4187859 aacagtaagaaa 4187870



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>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                         
Query: 140   atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 199
             |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 87863 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 87922

                                                                         
Query: 200   gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 259
             ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 87923 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 87982

                                                                         
Query: 260   acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 319
             ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 87983 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 88042

                                                                         
Query: 320   gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 376
             ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 88043 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 88102

                                                                         
Query: 377   gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 436
             ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 88103 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 88162

                                                                         
Query: 437   tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 496
             |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 88163 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 88222

                                                                      
Query: 497   acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 553
             ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 88223 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 88279



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                         
Query: 589   agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 648
             |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 88327 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 88386

                         
Query: 649   gacagtaagaaa 660
              |||||||||||
Sbjct: 88387 aacagtaagaaa 88398



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>dbj|AK070967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067F09, full
            insert sequence
          Length = 3799

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                        
Query: 140  atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 199
            |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 2027 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 2086

                                                                        
Query: 200  gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 259
            ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 2087 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 2146

                                                                        
Query: 260  acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 319
            ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 2147 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 2206

                                                                        
Query: 320  gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 376
            ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 2207 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 2266

                                                                        
Query: 377  gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 436
            ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 2267 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 2326

                                                                        
Query: 437  tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 496
            |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 2327 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 2386

                                                                     
Query: 497  acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 553
            ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 2387 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 2443



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                        
Query: 589  agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 648
            |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 2491 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 2550

                        
Query: 649  gacagtaagaaa 660
             |||||||||||
Sbjct: 2551 aacagtaagaaa 2562



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>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0076N15, complete sequence
          Length = 134307

 Score =  268 bits (135), Expect = 2e-68
 Identities = 347/417 (83%), Gaps = 3/417 (0%)
 Strand = Plus / Plus

                                                                         
Query: 140   atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 199
             |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 15841 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 15900

                                                                         
Query: 200   gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 259
             ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 15901 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 15960

                                                                         
Query: 260   acaaccaagattcctgtttcagagtcctcaaaggaaatcagcgcagaccaaccagagtct 319
             ||| ||| |||| |||| ||||  ||||| || || |  |  ||||| |||| |||  ||
Sbjct: 15961 acatccaggatttctgtatcaggatcctccaaagacactattgcagatcaacaagatcct 16020

                                                                         
Query: 320   gt---accaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagat 376
             ||   |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 16021 gttataccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagat 16080

                                                                         
Query: 377   gatatcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctt 436
             ||||| |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||
Sbjct: 16081 gatattacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatt 16140

                                                                         
Query: 437   tcactcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccag 496
             |||||||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 16141 tcactcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccag 16200

                                                                      
Query: 497   acatcaagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 553
             ||||| |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 16201 acatcgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 16257



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                         
Query: 589   agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 648
             |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 16305 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 16364

                         
Query: 649   gacagtaagaaa 660
              |||||||||||
Sbjct: 16365 aacagtaagaaa 16376



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>dbj|AK068487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156N12, full
           insert sequence
          Length = 2169

 Score =  240 bits (121), Expect = 5e-60
 Identities = 205/233 (87%)
 Strand = Plus / Plus

                                                                       
Query: 321 taccaagcaaccctgatgaagaagcacatcggtattggcaacaacagcttccagatgata 380
           ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 582 taccaagtaaccctgatgaagaagcacatcggtactggcaagaacagcttccagatgata 641

                                                                       
Query: 381 tcacccctgatttcaacgttcttggccaagatgagactcctggacctgacagtctttcac 440
           | |||||||||||||| ||||| || ||||||||||  ||||||||||| | | ||||||
Sbjct: 642 ttacccctgatttcaaagttctgggacaagatgagatgcctggacctgataatatttcac 701

                                                                       
Query: 441 tcacgggcttgtcaatgaatgatggctttggtgcttcattattttctccaaaccagacat 500
           |||| ||||||||||| |||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 702 tcactggcttgtcaataaatgatagcattggtgcttcactattttctccaaaccagacat 761

                                                                
Query: 501 caagaatgcagcaccatgcttctccatttgttagggacacgctaagtacacga 553
           | |   |||| |||| ||||||||| ||| |||||||||| || || ||||||
Sbjct: 762 cgaatttgcaacaccgtgcttctccttttattagggacactctgagcacacga 814



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                       
Query: 589 agctactattatgagtcccactgcaagtactatgagtccaactgctgctccatgggtaaa 648
           |||||||||||||||||| ||||||||  |||||||||||||||| ||||| ||||||||
Sbjct: 862 agctactattatgagtccaactgcaagcgctatgagtccaactgcggctccgtgggtaaa 921

                       
Query: 649 gacagtaagaaa 660
            |||||||||||
Sbjct: 922 aacagtaagaaa 933



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 116/142 (81%)
 Strand = Plus / Plus

                                                                       
Query: 140 atgtccattgaagaaaggaaaataagtttgataaacaggacgacttcgttaaatcctaat 199
           |||||||| ||||| || | | ||||||||||||||| ||| ||| |||||||||| |||
Sbjct: 398 atgtccatcgaagagagaacattaagtttgataaacaagaccactgcgttaaatccaaat 457

                                                                       
Query: 200 gcggtagaatttgttccttcatgccttagatgtgtgagtgatgcttcaaacagatcggac 259
           ||   ||||||||| ||||||| ||| |||| | | | ||||| |||||| ||||| |||
Sbjct: 458 gcacaagaatttgtaccttcatccctcagatctatcaatgatgtttcaaatagatcagac 517

                                 
Query: 260 acaaccaagattcctgtttcag 281
           ||| ||| |||| |||| ||||
Sbjct: 518 acatccaggatttctgtatcag 539



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>emb|AL355304.12| Human DNA sequence from clone RP11-439L18 on chromosome 6q23.2-24.3
             Contains two putative novel genes, part of a novel gene
             (FLJ32928) and two CpG islands, complete sequence
          Length = 76581

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 149   gaagaaaggaaaataagtttgataa 173
             |||||||| ||||||||||||||||
Sbjct: 10394 gaagaaagaaaaataagtttgataa 10418



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>emb|AL158205.12| Human DNA sequence from clone RP11-177F4 on chromosome 9 Contains a CpG
             island, complete sequence
          Length = 68171

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 155   aggaaaataagtttgataaac 175
             |||||||||||||||||||||
Sbjct: 10126 aggaaaataagtttgataaac 10146



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>gb|AF011889.1|AF011889 Human Xq28 cosmids U126G1, U142F2, U69B6, U145C10, U169A5, U84H1, U24D12,
              U80A7, U153E6, L35485, and R7-163A8 containing iduronate
              2-sulfatase gene and pseudogene, complete sequence
          Length = 326663

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 21     cgagaggaggagcagcggaggcggagaag 49
              ||||||||||||||| ||||| |||||||
Sbjct: 302140 cgagaggaggagcagaggaggaggagaag 302112



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>emb|AL844854.6| Mouse DNA sequence from clone RP23-368I1 on chromosome 2, complete
             sequence
          Length = 185135

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   cattgaagaaaggaaaataag 165
             |||||||||||||||||||||
Sbjct: 66471 cattgaagaaaggaaaataag 66451



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>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0064E13, complete sequence
          Length = 150158

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    gaggaggagcagcggaggcggaga 47
             |||||||||||||||||| |||||
Sbjct: 55982 gaggaggagcagcggagggggaga 56005



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>gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, complete sequence
          Length = 246043

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   tcatgccttagatgtgtgagtgat 241
             ||||||||||||||||| ||||||
Sbjct: 38697 tcatgccttagatgtgtcagtgat 38674



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>gb|AC153600.8| Mus musculus 6 BAC RP23-380C10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 194848

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    ctttggtgcttcattatttt 485
              ||||||||||||||||||||
Sbjct: 155109 ctttggtgcttcattatttt 155090



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 608   actgcaagtactatgagtcc 627
             ||||||||||||||||||||
Sbjct: 13883 actgcaagtactatgagtcc 13902



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>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence
          Length = 188819

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    gaggcggagaagcaaggaga 57
             ||||||||||||||||||||
Sbjct: 89131 gaggcggagaagcaaggaga 89112



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>gb|AC092637.2| Homo sapiens BAC clone RP11-358M3 from 7, complete sequence
          Length = 126643

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   tgcttcattattttctccaa 491
             ||||||||||||||||||||
Sbjct: 62810 tgcttcattattttctccaa 62791



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>emb|Z95329.1|HS522O2 Human DNA sequence from clone RP3-522O2 on chromosome 6q21 Contains the
             3' end of the BVES gene for blood vessel epicardial
             substance and part of the gene for a novel protein similar
             to FLJ12457, complete sequence
          Length = 102837

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 148   tgaagaaaggaaaataagtttgat 171
             |||||| |||||||||||||||||
Sbjct: 34102 tgaagagaggaaaataagtttgat 34125



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>emb|AL596184.9| Human DNA sequence from clone CTD-2552G1 on chromosome 6, complete
             sequence
          Length = 65978

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 149   gaagaaaggaaaataagtttgataaaca 176
             ||||||| ||||||||||||| ||||||
Sbjct: 60338 gaagaaaagaaaataagtttggtaaaca 60311



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>emb|AL590240.5| Human DNA sequence from clone RP11-266I3 on chromosome X Contains a
              likely ortholog of mouse hepatoma-derived growth factor
              related protein 3 pseudogene (HDGFRP3), a novel protein
              similar to PAGE-5 protein (LOC203569), a novel protein
              similar to PAGE-5 protein (LOC139795), gene FLJ20434, a
              cytochrome c oxidase I (MTCO1) pseudogene, a G antigen,
              family D pseudogene and a CpG island, complete sequence
          Length = 130005

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     tgtcaaattctgaattctgc 111
              ||||||||||||||||||||
Sbjct: 127627 tgtcaaattctgaattctgc 127646



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>emb|AL449403.11| Human DNA sequence from clone RP11-569G13 on chromosome 9 Contains a
             eukaryotic translation initiation factor 4B (EIF4B)
             pseudogene and part of a novel gene, complete sequence
          Length = 173916

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   accatgcttctccatttgtt 532
             ||||||||||||||||||||
Sbjct: 63243 accatgcttctccatttgtt 63224



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>emb|AL031054.1|HS48G12 Human DNA sequence from clone RP1-48G12 on chromosome Xq27.1-27.3
             Contains a CpG island, complete sequence
          Length = 199016

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   ctgaattctgctgaattgct 120
             ||||||||||||||||||||
Sbjct: 24318 ctgaattctgctgaattgct 24299



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>emb|BX120000.8| Zebrafish DNA sequence from clone CH211-214C13 in linkage group 17,
            complete sequence
          Length = 214728

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  tgtgagtgatgcttcaaaca 251
            ||||||||||||||||||||
Sbjct: 4303 tgtgagtgatgcttcaaaca 4284



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>gb|AC155328.5| Mus musculus 6 BAC RP24-75K10 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 216930

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 608   actgcaagtactatgagtcc 627
             ||||||||||||||||||||
Sbjct: 96821 actgcaagtactatgagtcc 96840



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>gb|AC073650.44| Homo sapiens 12 BAC RP11-44F24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 91200

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   agagtcctcaaaggaaatca 299
             ||||||||||||||||||||
Sbjct: 48462 agagtcctcaaaggaaatca 48481



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>gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, complete sequence
          Length = 177482

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 218    tcatgccttagatgtgtgagtgat 241
              ||||||||||||||||| ||||||
Sbjct: 136466 tcatgccttagatgtgtcagtgat 136443



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>emb|AL845457.16| Mouse DNA sequence from clone RP23-34E24 on chromosome 2, complete
             sequence
          Length = 221009

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 503   agaatgcagcaccatgcttc 522
             ||||||||||||||||||||
Sbjct: 19083 agaatgcagcaccatgcttc 19064



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>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence
          Length = 198847

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 153    aaaggaaaataagtttgataaaca 176
              |||||||||| |||||||||||||
Sbjct: 190828 aaaggaaaatgagtttgataaaca 190851



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>gb|AC138306.4| Mus musculus BAC clone RP24-240E9 from 16, complete sequence
          Length = 170196

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 472    tgcttcattattttctccaa 491
              ||||||||||||||||||||
Sbjct: 121681 tgcttcattattttctccaa 121700



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>gb|AC154781.2| Mus musculus BAC clone RP24-463K5 from 16, complete sequence
          Length = 173258

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   tgcttcattattttctccaa 491
             ||||||||||||||||||||
Sbjct: 33060 tgcttcattattttctccaa 33079



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>gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, complete sequence
          Length = 168482

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   tcaagaatgcagcaccatgc 519
             ||||||||||||||||||||
Sbjct: 41067 tcaagaatgcagcaccatgc 41048



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 24       gaggaggagcagcggaggcggaga 47
                |||||||||||||||||| |||||
Sbjct: 20331723 gaggaggagcagcggagggggaga 20331746



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>gb|AC163743.6| Mus musculus BAC clone RP23-415J4 from chromosome 13, complete sequence
          Length = 198305

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 153   aaaggaaaataagtttgataaaca 176
             |||||||||| |||||||||||||
Sbjct: 70908 aaaggaaaatgagtttgataaaca 70931



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>gb|J03639.1|HUMDBLTP Human DBL oncogene encoding a transforming protein mRNA, complete
           cds
          Length = 2534

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 14  gcgagggcgagaggaggagcagcg 37
           ||||||||| ||||||||||||||
Sbjct: 176 gcgagggcgggaggaggagcagcg 199


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,748,180
Number of Sequences: 3902068
Number of extensions: 6748180
Number of successful extensions: 137898
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137643
Number of HSP's gapped (non-prelim): 248
length of query: 661
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 638
effective length of database: 17,143,297,704
effective search space: 10937423935152
effective search space used: 10937423935152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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