ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal34c21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY831390.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase 2C 2 K2 form (BIPP2C2) mRNA, complete cds, alternatively spliced Length = 1526 Score = 214 bits (108), Expect = 2e-52 Identities = 258/308 (83%) Strand = Plus / Plus Query: 212 ttgaagaggccagctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaaca 271 |||||| |||||||||||||||| |||||| ||||| || |||||||||||||||| Sbjct: 751 ttgaagcggccagctcttagcgcagaaccatcgattcaagttcgcaagctcaaaccaaat 810 Query: 272 gatcagttcataatatttgcctcggacggtctttgggagcatctcagcgatgacgctgct 331 |||| |||| | |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 811 gatctgttcctgatatttgcttcagatggtctctgggagcatctcagtgacgacgctgcg 870 Query: 332 gtgcaaattgtcttcaagaacccaagaacgggtatagcaaaccgattagtgcggtccgcc 391 ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| | |||| Sbjct: 871 gtgcagattgtcttcaagaatccaaggacgggtatagcaaacagattggtgaaggccgct 930 Query: 392 ttgaaggaggccacgaagaagagagaggtcagcgtgcacgacctgaggacgatagagcgg 451 || ||||| ||||||| |||||| ||||||||| | | || |||| |||||||||| | Sbjct: 931 ttaaaggaagccacgaggaagagggaggtcagcttccgtgatctgaagacgatagagaag 990 Query: 452 ggcgtgcgacgccatttccacgacgacatcagtgtcgtcgtggtgtacctcgaccggcac 511 || ||| | ||||||||||||||||||||||| ||| |||| || ||||| ||||| ||| Sbjct: 991 ggagtgaggcgccatttccacgacgacatcagcgtcatcgtcgtctaccttgaccgccac 1050 Query: 512 cggggtcg 519 || ||||| Sbjct: 1051 cgcggtcg 1058 Score = 117 bits (59), Expect = 4e-23 Identities = 131/155 (84%) Strand = Plus / Plus Query: 23 gcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggcagatcgtg 82 |||||||||||||||||| |||| || | ||| ||||| ||||| | |||||||||| Sbjct: 562 gcctccgaggaggtccggcgggagctcaccgcgctcaacccggacgatgcgcagatcgtg 621 Query: 83 gtgcacaccaggggcgcctggaggatcaaggggataattcaggtgtcaagatccattggt 142 |||||| ||||||| || |||||| | |||||||| |||||||| || ||| |||||||| Sbjct: 622 gtgcacgccaggggtgcgtggagggtgaaggggatcattcaggtatcgagaaccattggt 681 Query: 143 gatgtatacttgaagaaaccggagtatagcttgga 177 ||||| ||||||||||||| ||||||||| |||| Sbjct: 682 gatgtttacttgaagaaacaagagtatagcatgga 716
>ref|XM_469858.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1641 Score = 214 bits (108), Expect = 2e-52 Identities = 258/308 (83%) Strand = Plus / Plus Query: 212 ttgaagaggccagctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaaca 271 |||||| |||||||||||||||| |||||| ||||| || |||||||||||||||| Sbjct: 822 ttgaagcggccagctcttagcgcagaaccatcgattcaagttcgcaagctcaaaccaaat 881 Query: 272 gatcagttcataatatttgcctcggacggtctttgggagcatctcagcgatgacgctgct 331 |||| |||| | |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 882 gatctgttcctgatatttgcttcagatggtctctgggagcatctcagtgacgacgctgcg 941 Query: 332 gtgcaaattgtcttcaagaacccaagaacgggtatagcaaaccgattagtgcggtccgcc 391 ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| | |||| Sbjct: 942 gtgcagattgtcttcaagaatccaaggacgggtatagcaaacagattggtgaaggccgct 1001 Query: 392 ttgaaggaggccacgaagaagagagaggtcagcgtgcacgacctgaggacgatagagcgg 451 || ||||| ||||||| |||||| ||||||||| | | || |||| |||||||||| | Sbjct: 1002 ttaaaggaagccacgaggaagagggaggtcagcttccgtgatctgaagacgatagagaag 1061 Query: 452 ggcgtgcgacgccatttccacgacgacatcagtgtcgtcgtggtgtacctcgaccggcac 511 || ||| | ||||||||||||||||||||||| ||| |||| || ||||| ||||| ||| Sbjct: 1062 ggagtgaggcgccatttccacgacgacatcagcgtcatcgtcgtctaccttgaccgccac 1121 Query: 512 cggggtcg 519 || ||||| Sbjct: 1122 cgcggtcg 1129 Score = 117 bits (59), Expect = 4e-23 Identities = 131/155 (84%) Strand = Plus / Plus Query: 23 gcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggcagatcgtg 82 |||||||||||||||||| |||| || | ||| ||||| ||||| | |||||||||| Sbjct: 633 gcctccgaggaggtccggcgggagctcaccgcgctcaacccggacgatgcgcagatcgtg 692 Query: 83 gtgcacaccaggggcgcctggaggatcaaggggataattcaggtgtcaagatccattggt 142 |||||| ||||||| || |||||| | |||||||| |||||||| || ||| |||||||| Sbjct: 693 gtgcacgccaggggtgcgtggagggtgaaggggatcattcaggtatcgagaaccattggt 752 Query: 143 gatgtatacttgaagaaaccggagtatagcttgga 177 ||||| ||||||||||||| ||||||||| |||| Sbjct: 753 gatgtttacttgaagaaacaagagtatagcatgga 787
>dbj|AK105764.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D12, full insert sequence Length = 1635 Score = 214 bits (108), Expect = 2e-52 Identities = 258/308 (83%) Strand = Plus / Plus Query: 212 ttgaagaggccagctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaaca 271 |||||| |||||||||||||||| |||||| ||||| || |||||||||||||||| Sbjct: 876 ttgaagcggccagctcttagcgcagaaccatcgattcaagttcgcaagctcaaaccaaat 935 Query: 272 gatcagttcataatatttgcctcggacggtctttgggagcatctcagcgatgacgctgct 331 |||| |||| | |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 936 gatctgttcctgatatttgcttcagatggtctctgggagcatctcagtgacgacgctgcg 995 Query: 332 gtgcaaattgtcttcaagaacccaagaacgggtatagcaaaccgattagtgcggtccgcc 391 ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| | |||| Sbjct: 996 gtgcagattgtcttcaagaatccaaggacgggtatagcaaacagattggtgaaggccgct 1055 Query: 392 ttgaaggaggccacgaagaagagagaggtcagcgtgcacgacctgaggacgatagagcgg 451 || ||||| ||||||| |||||| ||||||||| | | || |||| |||||||||| | Sbjct: 1056 ttaaaggaagccacgaggaagagggaggtcagcttccgtgatctgaagacgatagagaag 1115 Query: 452 ggcgtgcgacgccatttccacgacgacatcagtgtcgtcgtggtgtacctcgaccggcac 511 || ||| | ||||||||||||||||||||||| ||| |||| || ||||| ||||| ||| Sbjct: 1116 ggagtgaggcgccatttccacgacgacatcagcgtcatcgtcgtctaccttgaccgccac 1175 Query: 512 cggggtcg 519 || ||||| Sbjct: 1176 cgcggtcg 1183 Score = 109 bits (55), Expect = 9e-21 Identities = 130/155 (83%) Strand = Plus / Plus Query: 23 gcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggcagatcgtg 82 |||||||||||||||||| |||| || | ||| ||||| ||||| | |||||||||| Sbjct: 688 gcctccgaggaggtccggcgggagctcaccgcgctcaacccggacgatgcgcagatcgtg 747 Query: 83 gtgcacaccaggggcgcctggaggatcaaggggataattcaggtgtcaagatccattggt 142 |||||| ||||||| || |||||| | |||||||| |||||||| || ||| |||||||| Sbjct: 748 gtgcacgccaggggtgcgtggagggtgaaggggatcattcaggtatcgagaaccattggt 807 Query: 143 gatgtatacttgaagaaaccggagtatagcttgga 177 || || ||||||||||||| ||||||||| |||| Sbjct: 808 gacgtttacttgaagaaacaagagtatagcatgga 842
>dbj|AK102620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099H11, full insert sequence Length = 1532 Score = 214 bits (108), Expect = 2e-52 Identities = 258/308 (83%) Strand = Plus / Plus Query: 212 ttgaagaggccagctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaaca 271 |||||| |||||||||||||||| |||||| ||||| || |||||||||||||||| Sbjct: 773 ttgaagcggccagctcttagcgcagaaccatcgattcaagttcgcaagctcaaaccaaat 832 Query: 272 gatcagttcataatatttgcctcggacggtctttgggagcatctcagcgatgacgctgct 331 |||| |||| | |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 833 gatctgttcctgatatttgcttcagatggtctctgggagcatctcagtgacgacgctgcg 892 Query: 332 gtgcaaattgtcttcaagaacccaagaacgggtatagcaaaccgattagtgcggtccgcc 391 ||||| |||||||||||||| ||||| ||||||||||||||| |||| ||| | |||| Sbjct: 893 gtgcagattgtcttcaagaatccaaggacgggtatagcaaacagattggtgaaggccgct 952 Query: 392 ttgaaggaggccacgaagaagagagaggtcagcgtgcacgacctgaggacgatagagcgg 451 || ||||| ||||||| |||||| ||||||||| | | || |||| |||||||||| | Sbjct: 953 ttaaaggaagccacgaggaagagggaggtcagcttccgtgatctgaagacgatagagaag 1012 Query: 452 ggcgtgcgacgccatttccacgacgacatcagtgtcgtcgtggtgtacctcgaccggcac 511 || ||| | ||||||||||||||||||||||| ||| |||| || ||||| ||||| ||| Sbjct: 1013 ggagtgaggcgccatttccacgacgacatcagcgtcatcgtcgtctaccttgaccgccac 1072 Query: 512 cggggtcg 519 || ||||| Sbjct: 1073 cgcggtcg 1080 Score = 117 bits (59), Expect = 4e-23 Identities = 131/155 (84%) Strand = Plus / Plus Query: 23 gcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggcagatcgtg 82 |||||||||||||||||| |||| || | ||| ||||| ||||| | |||||||||| Sbjct: 584 gcctccgaggaggtccggcgggagctcaccgcgctcaacccggacgatgcgcagatcgtg 643 Query: 83 gtgcacaccaggggcgcctggaggatcaaggggataattcaggtgtcaagatccattggt 142 |||||| ||||||| || |||||| | |||||||| |||||||| || ||| |||||||| Sbjct: 644 gtgcacgccaggggtgcgtggagggtgaaggggatcattcaggtatcgagaaccattggt 703 Query: 143 gatgtatacttgaagaaaccggagtatagcttgga 177 ||||| ||||||||||||| ||||||||| |||| Sbjct: 704 gatgtttacttgaagaaacaagagtatagcatgga 738
>gb|AY831391.1| Oryza sativa (indica cultivar-group) BTH-induced protein phosphatase 2C 2 K3 form (BIPP2C2) mRNA, complete cds, alternatively spliced Length = 1326 Score = 161 bits (81), Expect = 3e-36 Identities = 186/221 (84%) Strand = Plus / Plus Query: 299 ggtctttgggagcatctcagcgatgacgctgctgtgcaaattgtcttcaagaacccaaga 358 ||||| |||||||||||||| || |||||||| ||||| |||||||||||||| ||||| Sbjct: 736 ggtctctgggagcatctcagtgacgacgctgcggtgcagattgtcttcaagaatccaagg 795 Query: 359 acgggtatagcaaaccgattagtgcggtccgccttgaaggaggccacgaagaagagagag 418 ||||||||||||||| |||| ||| | |||| || ||||| ||||||| |||||| ||| Sbjct: 796 acgggtatagcaaacagattggtgaaggccgctttaaaggaagccacgaggaagagggag 855 Query: 419 gtcagcgtgcacgacctgaggacgatagagcggggcgtgcgacgccatttccacgacgac 478 |||||| | | || |||| |||||||||| ||| ||| | |||||||||||||||||| Sbjct: 856 gtcagcttccgtgatctgaagacgatagagaagggagtgaggcgccatttccacgacgac 915 Query: 479 atcagtgtcgtcgtggtgtacctcgaccggcaccggggtcg 519 ||||| ||| |||| || ||||| ||||| ||||| ||||| Sbjct: 916 atcagcgtcatcgtcgtctaccttgaccgccaccgcggtcg 956 Score = 117 bits (59), Expect = 4e-23 Identities = 131/155 (84%) Strand = Plus / Plus Query: 23 gcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggcagatcgtg 82 |||||||||||||||||| |||| || | ||| ||||| ||||| | |||||||||| Sbjct: 563 gcctccgaggaggtccggcgggagctcaccgcgctcaacccggacgatgcgcagatcgtg 622 Query: 83 gtgcacaccaggggcgcctggaggatcaaggggataattcaggtgtcaagatccattggt 142 |||||| ||||||| || |||||| | |||||||| |||||||| || ||| |||||||| Sbjct: 623 gtgcacgccaggggtgcgtggagggtgaaggggatcattcaggtatcgagaaccattggt 682 Query: 143 gatgtatacttgaagaaaccggagtatagcttgga 177 ||||| ||||||||||||| ||||||||| |||| Sbjct: 683 gatgtttacttgaagaaacaagagtatagcatgga 717
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 125 bits (63), Expect = 2e-25 Identities = 129/151 (85%) Strand = Plus / Minus Query: 212 ttgaagaggccagctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaaca 271 |||||| |||||||||||||||| |||||| ||||| || |||||||||||||||| Sbjct: 31169135 ttgaagcggccagctcttagcgcagaaccatcgattcaagttcgcaagctcaaaccaaat 31169076 Query: 272 gatcagttcataatatttgcctcggacggtctttgggagcatctcagcgatgacgctgct 331 |||| |||| | |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 31169075 gatctgttcctgatatttgcttcagatggtctctgggagcatctcagtgacgacgctgcg 31169016 Query: 332 gtgcaaattgtcttcaagaacccaagaacgg 362 ||||| |||||||||||||| ||||| |||| Sbjct: 31169015 gtgcagattgtcttcaagaatccaaggacgg 31168985 Score = 95.6 bits (48), Expect = 1e-16 Identities = 117/140 (83%) Strand = Plus / Minus Query: 223 agctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaacagatcagttcat 282 ||||||||| || |||||| |||||| || |||||||| ||||||| ||| |||| | Sbjct: 255859 agctcttagtgcagaaccatcaattcaagttcgcaagctgaaaccaaatgatatgttcct 255800 Query: 283 aatatttgcctcggacggtctttgggagcatctcagcgatgacgctgctgtgcaaattgt 342 |||||||| || || |||| | ||||||||| |||||||||||||| ||||| ||||| Sbjct: 255799 gatatttgcttcagatggtccctaggagcatcttagcgatgacgctgcggtgcagattgt 255740 Query: 343 cttcaagaacccaagaacgg 362 ||||||||| |||||||||| Sbjct: 255739 cttcaagaatccaagaacgg 255720 Score = 93.7 bits (47), Expect = 5e-16 Identities = 131/159 (82%) Strand = Plus / Minus Query: 361 gggtatagcaaaccgattagtgcggtccgccttgaaggaggccacgaagaagagagaggt 420 ||||||||||||| |||| ||| | |||| || ||||| ||||||| |||||| ||||| Sbjct: 31168863 gggtatagcaaacagattggtgaaggccgctttaaaggaagccacgaggaagagggaggt 31168804 Query: 421 cagcgtgcacgacctgaggacgatagagcggggcgtgcgacgccatttccacgacgacat 480 |||| | | || |||| |||||||||| ||| ||| | |||||||||||||||||||| Sbjct: 31168803 cagcttccgtgatctgaagacgatagagaagggagtgaggcgccatttccacgacgacat 31168744 Query: 481 cagtgtcgtcgtggtgtacctcgaccggcaccggggtcg 519 ||| ||| |||| || ||||| ||||| ||||| ||||| Sbjct: 31168743 cagcgtcatcgtcgtctaccttgaccgccaccgcggtcg 31168705 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Minus Query: 23 gcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggcagatcgtg 82 |||||||||||||||||| |||| || | ||| ||||| ||||| | |||||||||| Sbjct: 31170119 gcctccgaggaggtccggcgggagctcaccgcgctcaacccggacgatgcgcagatcgtg 31170060 Query: 83 gtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 |||||| ||||||| || |||||| | |||||||| ||||||||| Sbjct: 31170059 gtgcacgccaggggtgcgtggagggtgaaggggatcattcaggtg 31170015 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtatagcttgga 177 |||||| || ||| ||||||||||||| ||||||||||||| ||||||||| |||| Sbjct: 31169226 tcaggtatcgagaaccattggtgatgtttacttgaagaaacaagagtatagcatgga 31169170 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 74 cagatcgtggtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 |||||| ||||||||||||||| || |||||| | |||||||| ||||||||| Sbjct: 256797 cagatcctggtgcacaccagggttgcgtggagggtgaaggggatcattcaggtg 256744 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtatagcttgga 177 |||||| || ||| ||||||||||||| ||||||||| ||| ||||||||| |||| Sbjct: 255961 tcaggtatcgagaaccattggtgatgtttacttgaaggaacaagagtatagcatgga 255905 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 461 cgccatttccacgacgacatcagtgtcgtcgtggtgtacctcgaccggcaccggggtcg 519 |||| |||||||||||||||||| || |||| || ||||| ||||| ||||| ||||| Sbjct: 255510 cgccgtttccacgacgacatcagcatcatcgtcgtctaccttgaccgccaccgtggtcg 255452
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 125 bits (63), Expect = 2e-25 Identities = 129/151 (85%) Strand = Plus / Minus Query: 212 ttgaagaggccagctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaaca 271 |||||| |||||||||||||||| |||||| ||||| || |||||||||||||||| Sbjct: 89776 ttgaagcggccagctcttagcgcagaaccatcgattcaagttcgcaagctcaaaccaaat 89717 Query: 272 gatcagttcataatatttgcctcggacggtctttgggagcatctcagcgatgacgctgct 331 |||| |||| | |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 89716 gatctgttcctgatatttgcttcagatggtctctgggagcatctcagtgacgacgctgcg 89657 Query: 332 gtgcaaattgtcttcaagaacccaagaacgg 362 ||||| |||||||||||||| ||||| |||| Sbjct: 89656 gtgcagattgtcttcaagaatccaaggacgg 89626 Score = 93.7 bits (47), Expect = 5e-16 Identities = 131/159 (82%) Strand = Plus / Minus Query: 361 gggtatagcaaaccgattagtgcggtccgccttgaaggaggccacgaagaagagagaggt 420 ||||||||||||| |||| ||| | |||| || ||||| ||||||| |||||| ||||| Sbjct: 89504 gggtatagcaaacagattggtgaaggccgctttaaaggaagccacgaggaagagggaggt 89445 Query: 421 cagcgtgcacgacctgaggacgatagagcggggcgtgcgacgccatttccacgacgacat 480 |||| | | || |||| |||||||||| ||| ||| | |||||||||||||||||||| Sbjct: 89444 cagcttccgtgatctgaagacgatagagaagggagtgaggcgccatttccacgacgacat 89385 Query: 481 cagtgtcgtcgtggtgtacctcgaccggcaccggggtcg 519 ||| ||| |||| || ||||| ||||| ||||| ||||| Sbjct: 89384 cagcgtcatcgtcgtctaccttgaccgccaccgcggtcg 89346 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Minus Query: 23 gcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggcagatcgtg 82 |||||||||||||||||| |||| || | ||| ||||| ||||| | |||||||||| Sbjct: 90760 gcctccgaggaggtccggcgggagctcaccgcgctcaacccggacgatgcgcagatcgtg 90701 Query: 83 gtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 |||||| ||||||| || |||||| | |||||||| ||||||||| Sbjct: 90700 gtgcacgccaggggtgcgtggagggtgaaggggatcattcaggtg 90656 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtatagcttgga 177 |||||| || ||| ||||||||||||| ||||||||||||| ||||||||| |||| Sbjct: 89867 tcaggtatcgagaaccattggtgatgtttacttgaagaaacaagagtatagcatgga 89811
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 125 bits (63), Expect = 2e-25 Identities = 129/151 (85%) Strand = Plus / Minus Query: 212 ttgaagaggccagctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaaca 271 |||||| |||||||||||||||| |||||| ||||| || |||||||||||||||| Sbjct: 31259658 ttgaagcggccagctcttagcgcagaaccatcgattcaagttcgcaagctcaaaccaaat 31259599 Query: 272 gatcagttcataatatttgcctcggacggtctttgggagcatctcagcgatgacgctgct 331 |||| |||| | |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 31259598 gatctgttcctgatatttgcttcagatggtctctgggagcatctcagtgacgacgctgcg 31259539 Query: 332 gtgcaaattgtcttcaagaacccaagaacgg 362 ||||| |||||||||||||| ||||| |||| Sbjct: 31259538 gtgcagattgtcttcaagaatccaaggacgg 31259508 Score = 95.6 bits (48), Expect = 1e-16 Identities = 117/140 (83%) Strand = Plus / Minus Query: 223 agctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaacagatcagttcat 282 ||||||||| || |||||| |||||| || |||||||| ||||||| ||| |||| | Sbjct: 255859 agctcttagtgcagaaccatcaattcaagttcgcaagctgaaaccaaatgatatgttcct 255800 Query: 283 aatatttgcctcggacggtctttgggagcatctcagcgatgacgctgctgtgcaaattgt 342 |||||||| || || |||| | ||||||||| |||||||||||||| ||||| ||||| Sbjct: 255799 gatatttgcttcagatggtccctaggagcatcttagcgatgacgctgcggtgcagattgt 255740 Query: 343 cttcaagaacccaagaacgg 362 ||||||||| |||||||||| Sbjct: 255739 cttcaagaatccaagaacgg 255720 Score = 93.7 bits (47), Expect = 5e-16 Identities = 131/159 (82%) Strand = Plus / Minus Query: 361 gggtatagcaaaccgattagtgcggtccgccttgaaggaggccacgaagaagagagaggt 420 ||||||||||||| |||| ||| | |||| || ||||| ||||||| |||||| ||||| Sbjct: 31259386 gggtatagcaaacagattggtgaaggccgctttaaaggaagccacgaggaagagggaggt 31259327 Query: 421 cagcgtgcacgacctgaggacgatagagcggggcgtgcgacgccatttccacgacgacat 480 |||| | | || |||| |||||||||| ||| ||| | |||||||||||||||||||| Sbjct: 31259326 cagcttccgtgatctgaagacgatagagaagggagtgaggcgccatttccacgacgacat 31259267 Query: 481 cagtgtcgtcgtggtgtacctcgaccggcaccggggtcg 519 ||| ||| |||| || ||||| ||||| ||||| ||||| Sbjct: 31259266 cagcgtcatcgtcgtctaccttgaccgccaccgcggtcg 31259228 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Minus Query: 23 gcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggcagatcgtg 82 |||||||||||||||||| |||| || | ||| ||||| ||||| | |||||||||| Sbjct: 31260642 gcctccgaggaggtccggcgggagctcaccgcgctcaacccggacgatgcgcagatcgtg 31260583 Query: 83 gtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 |||||| ||||||| || |||||| | |||||||| ||||||||| Sbjct: 31260582 gtgcacgccaggggtgcgtggagggtgaaggggatcattcaggtg 31260538 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtatagcttgga 177 |||||| || ||| ||||||||||||| ||||||||||||| ||||||||| |||| Sbjct: 31259749 tcaggtatcgagaaccattggtgatgtttacttgaagaaacaagagtatagcatgga 31259693 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 74 cagatcgtggtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 |||||| ||||||||||||||| || |||||| | |||||||| ||||||||| Sbjct: 256797 cagatcctggtgcacaccagggttgcgtggagggtgaaggggatcattcaggtg 256744 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtatagcttgga 177 |||||| || ||| ||||||||||||| ||||||||| ||| ||||||||| |||| Sbjct: 255961 tcaggtatcgagaaccattggtgatgtttacttgaaggaacaagagtatagcatgga 255905 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 461 cgccatttccacgacgacatcagtgtcgtcgtggtgtacctcgaccggcaccggggtcg 519 |||| |||||||||||||||||| || |||| || ||||| ||||| ||||| ||||| Sbjct: 255510 cgccgtttccacgacgacatcagcatcatcgtcgtctaccttgaccgccaccgtggtcg 255452
>dbj|AK066083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050O18, full insert sequence Length = 1776 Score = 125 bits (63), Expect = 2e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 212 ttgaagaggccagctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaaca 271 |||||| |||||||||||||||| |||||| ||||| || |||||||||||||||| Sbjct: 836 ttgaagcggccagctcttagcgcagaaccatcgattcaagttcgcaagctcaaaccaaat 895 Query: 272 gatcagttcataatatttgcctcggacggtctttgggagcatctcagcgatgacgctgct 331 |||| |||| | |||||||| || || ||||| |||||||||||||| || |||||||| Sbjct: 896 gatctgttcctgatatttgcttcagatggtctctgggagcatctcagtgacgacgctgcg 955 Query: 332 gtgcaaattgtcttcaagaacccaagaacgg 362 ||||| |||||||||||||| ||||| |||| Sbjct: 956 gtgcagattgtcttcaagaatccaaggacgg 986 Score = 117 bits (59), Expect = 4e-23 Identities = 131/155 (84%) Strand = Plus / Plus Query: 23 gcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggcagatcgtg 82 |||||||||||||||||| |||| || | ||| ||||| ||||| | |||||||||| Sbjct: 647 gcctccgaggaggtccggcgggagctcaccgcgctcaacccggacgatgcgcagatcgtg 706 Query: 83 gtgcacaccaggggcgcctggaggatcaaggggataattcaggtgtcaagatccattggt 142 |||||| ||||||| || |||||| | |||||||| |||||||| || ||| |||||||| Sbjct: 707 gtgcacgccaggggtgcgtggagggtgaaggggatcattcaggtatcgagaaccattggt 766 Query: 143 gatgtatacttgaagaaaccggagtatagcttgga 177 ||||| ||||||||||||| ||||||||| |||| Sbjct: 767 gatgtttacttgaagaaacaagagtatagcatgga 801 Score = 93.7 bits (47), Expect = 5e-16 Identities = 131/159 (82%) Strand = Plus / Plus Query: 361 gggtatagcaaaccgattagtgcggtccgccttgaaggaggccacgaagaagagagaggt 420 ||||||||||||| |||| ||| | |||| || ||||| ||||||| |||||| ||||| Sbjct: 1108 gggtatagcaaacagattggtgaaggccgctttaaaggaagccacgaggaagagggaggt 1167 Query: 421 cagcgtgcacgacctgaggacgatagagcggggcgtgcgacgccatttccacgacgacat 480 |||| | | || |||| |||||||||| ||| ||| | |||||||||||||||||||| Sbjct: 1168 cagcttccgtgatctgaagacgatagagaagggagtgaggcgccatttccacgacgacat 1227 Query: 481 cagtgtcgtcgtggtgtacctcgaccggcaccggggtcg 519 ||| ||| |||| || ||||| ||||| ||||| ||||| Sbjct: 1228 cagcgtcatcgtcgtctaccttgaccgccaccgcggtcg 1266
>dbj|AK099959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126F07, full insert sequence Length = 1984 Score = 111 bits (56), Expect = 2e-21 Identities = 164/200 (82%) Strand = Plus / Plus Query: 223 agctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaacagatcagttcat 282 ||||||||| || |||||| |||||| || |||||||| ||||||| ||| |||| | Sbjct: 1396 agctcttagtgcagaaccatcaattcaagttcgcaagctgaaaccaaatgatatgttcct 1455 Query: 283 aatatttgcctcggacggtctttgggagcatctcagcgatgacgctgctgtgcaaattgt 342 |||||||| || || |||| | ||||||||| |||||||||||||| ||||| ||||| Sbjct: 1456 gatatttgcttcagatggtccctaggagcatcttagcgatgacgctgcggtgcagattgt 1515 Query: 343 cttcaagaacccaagaacgggtatagcaaaccgattagtgcggtccgccttgaaggaggc 402 ||||||||| |||||||||| | |||||||| || | || | |||| |||||||| || Sbjct: 1516 cttcaagaatccaagaacggatgtagcaaacagagtggtaaaggccgctttgaaggaagc 1575 Query: 403 cacgaagaagagagaggtca 422 ||||| |||||| ||||||| Sbjct: 1576 cacgaggaagagggaggtca 1595 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 74 cagatcgtggtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 |||||| ||||||||||||||| || |||||| | |||||||| ||||||||| Sbjct: 458 cagatcctggtgcacaccagggttgcgtggagggtgaaggggatcattcaggtg 511 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtatagcttgga 177 |||||| || ||| ||||||||||||| ||||||||| ||| ||||||||| |||| Sbjct: 1294 tcaggtatcgagaaccattggtgatgtttacttgaaggaacaagagtatagcatgga 1350 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 461 cgccatttccacgacgacatcagtgtcgtcgtggtgtacctcgaccggcaccggggtcg 519 |||| |||||||||||||||||| || |||| || ||||| ||||| ||||| ||||| Sbjct: 1627 cgccgtttccacgacgacatcagcatcatcgtcgtctaccttgaccgccaccgtggtcg 1685
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 95.6 bits (48), Expect = 1e-16 Identities = 117/140 (83%) Strand = Plus / Minus Query: 223 agctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaacagatcagttcat 282 ||||||||| || |||||| |||||| || |||||||| ||||||| ||| |||| | Sbjct: 92926 agctcttagtgcagaaccatcaattcaagttcgcaagctgaaaccaaatgatatgttcct 92867 Query: 283 aatatttgcctcggacggtctttgggagcatctcagcgatgacgctgctgtgcaaattgt 342 |||||||| || || |||| | ||||||||| |||||||||||||| ||||| ||||| Sbjct: 92866 gatatttgcttcagatggtccctaggagcatcttagcgatgacgctgcggtgcagattgt 92807 Query: 343 cttcaagaacccaagaacgg 362 ||||||||| |||||||||| Sbjct: 92806 cttcaagaatccaagaacgg 92787 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 74 cagatcgtggtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 |||||| ||||||||||||||| || |||||| | |||||||| ||||||||| Sbjct: 93864 cagatcctggtgcacaccagggttgcgtggagggtgaaggggatcattcaggtg 93811 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Minus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtatagcttgga 177 |||||| || ||| ||||||||||||| ||||||||| ||| ||||||||| |||| Sbjct: 93028 tcaggtatcgagaaccattggtgatgtttacttgaaggaacaagagtatagcatgga 92972 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 461 cgccatttccacgacgacatcagtgtcgtcgtggtgtacctcgaccggcaccggggtcg 519 |||| |||||||||||||||||| || |||| || ||||| ||||| ||||| ||||| Sbjct: 92577 cgccgtttccacgacgacatcagcatcatcgtcgtctaccttgaccgccaccgtggtcg 92519
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 95.6 bits (48), Expect = 1e-16 Identities = 117/140 (83%) Strand = Plus / Plus Query: 223 agctcttagcgctgaaccacaaattcatgtccgcaagctcaaaccaacagatcagttcat 282 ||||||||| || |||||| |||||| || |||||||| ||||||| ||| |||| | Sbjct: 6757 agctcttagtgcagaaccatcaattcaagttcgcaagctgaaaccaaatgatatgttcct 6816 Query: 283 aatatttgcctcggacggtctttgggagcatctcagcgatgacgctgctgtgcaaattgt 342 |||||||| || || |||| | ||||||||| |||||||||||||| ||||| ||||| Sbjct: 6817 gatatttgcttcagatggtccctaggagcatcttagcgatgacgctgcggtgcagattgt 6876 Query: 343 cttcaagaacccaagaacgg 362 ||||||||| |||||||||| Sbjct: 6877 cttcaagaatccaagaacgg 6896 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 74 cagatcgtggtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 |||||| ||||||||||||||| || |||||| | |||||||| ||||||||| Sbjct: 5819 cagatcctggtgcacaccagggttgcgtggagggtgaaggggatcattcaggtg 5872 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtatagcttgga 177 |||||| || ||| ||||||||||||| ||||||||| ||| ||||||||| |||| Sbjct: 6655 tcaggtatcgagaaccattggtgatgtttacttgaaggaacaagagtatagcatgga 6711 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 461 cgccatttccacgacgacatcagtgtcgtcgtggtgtacctcgaccggcaccggggtcg 519 |||| |||||||||||||||||| || |||| || ||||| ||||| ||||| ||||| Sbjct: 7106 cgccgtttccacgacgacatcagcatcatcgtcgtctaccttgaccgccaccgtggtcg 7164
>ref|NM_119551.2| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT4G33920 mRNA, complete cds Length = 1611 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 119 attcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtat 169 |||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 823 attcaggtatcgagatcaattggggatgtatacttgaaaaaaccggagtat 873
>gb|AY081718.1| Arabidopsis thaliana AT4g33920/F17I5_110 mRNA, complete cds Length = 1143 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 119 attcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtat 169 |||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 631 attcaggtatcgagatcaattggggatgtatacttgaaaaaaccggagtat 681
>gb|AF372953.1|AF372953 Arabidopsis thaliana AT4g33920/F17I5_110 mRNA, complete cds Length = 1616 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 119 attcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtat 169 |||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 823 attcaggtatcgagatcaattggggatgtatacttgaaaaaaccggagtat 873
>gb|AY087982.1| Arabidopsis thaliana clone 40123 mRNA, complete sequence Length = 1409 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 119 attcaggtgtcaagatccattggtgatgtatacttgaagaaaccggagtat 169 |||||||| || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 765 attcaggtatcgagatcaattggggatgtatacttgaaaaaaccggagtat 815
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 131 agatccattggtgatgtatacttgaagaaaccggagtat 169 ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 95670 agatcaattggggatgtatacttgaaaaaaccggagtat 95708
>emb|AL031032.1|ATF17I5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17I5 (ESSA project) Length = 86748 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 131 agatccattggtgatgtatacttgaagaaaccggagtat 169 ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 46646 agatcaattggggatgtatacttgaaaaaaccggagtat 46684
>dbj|AP006117.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT09H13, TM0200, complete sequence Length = 91393 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 120 ttcaggtgtcaagatccattggtgatgtatacttgaagaaacc 162 |||||||||||||||| ||||||||||| || || |||||||| Sbjct: 79935 ttcaggtgtcaagatctattggtgatgtgtatttaaagaaacc 79893
>ref|NM_120013.4| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT4G38520 transcript variant AT4G38520.1 mRNA, complete cds Length = 1960 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 119 attcaggtgtcaagatccattggtgatgtatacttgaa 156 |||||||| |||||||||||||||||||| || ||||| Sbjct: 1176 attcaggtttcaagatccattggtgatgtgtatttgaa 1213
>ref|NM_202979.1| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT4G38520 transcript variant AT4G38520.2 mRNA, complete cds Length = 2225 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 119 attcaggtgtcaagatccattggtgatgtatacttgaa 156 |||||||| |||||||||||||||||||| || ||||| Sbjct: 1441 attcaggtttcaagatccattggtgatgtgtatttgaa 1478
>gb|BT020368.1| Arabidopsis thaliana At4g38520 gene, complete cds Length = 1203 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 119 attcaggtgtcaagatccattggtgatgtatacttgaa 156 |||||||| |||||||||||||||||||| || ||||| Sbjct: 682 attcaggtttcaagatccattggtgatgtgtatttgaa 719
>gb|AY062454.1| Arabidopsis thaliana putative protein phosphatase-2c (At4g38520; F20M13.80) mRNA, complete cds Length = 1902 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 119 attcaggtgtcaagatccattggtgatgtatacttgaa 156 |||||||| |||||||||||||||||||| || ||||| Sbjct: 1144 attcaggtttcaagatccattggtgatgtgtatttgaa 1181
>emb|BX827483.1|CNS0A3MB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS61ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1809 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 119 attcaggtgtcaagatccattggtgatgtatacttgaa 156 |||||||| |||||||||||||||||||| || ||||| Sbjct: 1132 attcaggtttcaagatccattggtgatgtgtatttgaa 1169
>gb|BT021094.1| Arabidopsis thaliana At4g38520 gene, complete cds Length = 1233 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 119 attcaggtgtcaagatccattggtgatgtatacttgaa 156 |||||||| |||||||||||||||||||| || ||||| Sbjct: 707 attcaggtttcaagatccattggtgatgtgtatttgaa 744
>gb|BT013609.1| Lycopersicon esculentum clone 132379R, mRNA sequence Length = 1807 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 272 gatcagttcataatatttgcctcggacggtctttgggagca 312 |||||||| || |||||||||||||| ||||| |||||||| Sbjct: 1229 gatcagtttattatatttgcctcggatggtctctgggagca 1269 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 129 caagatccattggtgatgtatacttgaagaaa 160 ||||||||||||||||||| ||||| |||||| Sbjct: 1086 caagatccattggtgatgtgtacttaaagaaa 1117
>ref|XM_476412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1461 Score = 48.1 bits (24), Expect = 0.029 Identities = 90/112 (80%) Strand = Plus / Plus Query: 16 caacgtcgcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggca 75 |||||| ||||| ||||||||||||| |||| || | ||| ||||||||||||| | Sbjct: 670 caacgtggcctcggaggaggtccggagggagctcgccgcgctccaccccgacgacggcga 729 Query: 76 gatcgtggtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 | ||||||| ||| || | ||||| |||||| | |||||||| || |||||| Sbjct: 730 ggtcgtggtccacgcccgcggcgcgtggagggtgaaggggatcatccaggtg 781
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaa 156 |||||| |||||||||||||||||||| || ||||| Sbjct: 125543 tcaggtttcaagatccattggtgatgtgtatttgaa 125508
>emb|AL035539.1|ATF22I13 Arabidopsis thaliana DNA chromosome 4, BAC clone F22I13 (ESSA project) Length = 93760 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaa 156 |||||| |||||||||||||||||||| || ||||| Sbjct: 84585 tcaggtttcaagatccattggtgatgtgtatttgaa 84550
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.029 Identities = 90/112 (80%) Strand = Plus / Minus Query: 16 caacgtcgcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggca 75 |||||| ||||| ||||||||||||| |||| || | ||| ||||||||||||| | Sbjct: 780175 caacgtggcctcggaggaggtccggagggagctcgccgcgctccaccccgacgacggcga 780116 Query: 76 gatcgtggtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 | ||||||| ||| || | ||||| |||||| | |||||||| || |||||| Sbjct: 780115 ggtcgtggtccacgcccgcggcgcgtggagggtgaaggggatcatccaggtg 780064
>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome IV, complete sequence Length = 107740 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaa 156 |||||| |||||||||||||||||||| || ||||| Sbjct: 39984 tcaggtttcaagatccattggtgatgtgtatttgaa 40019
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 48.1 bits (24), Expect = 0.029 Identities = 90/112 (80%) Strand = Plus / Minus Query: 16 caacgtcgcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggca 75 |||||| ||||| ||||||||||||| |||| || | ||| ||||||||||||| | Sbjct: 99982 caacgtggcctcggaggaggtccggagggagctcgccgcgctccaccccgacgacggcga 99923 Query: 76 gatcgtggtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 | ||||||| ||| || | ||||| |||||| | |||||||| || |||||| Sbjct: 99922 ggtcgtggtccacgcccgcggcgcgtggagggtgaaggggatcatccaggtg 99871
>dbj|AK102668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101O03, full insert sequence Length = 1461 Score = 48.1 bits (24), Expect = 0.029 Identities = 90/112 (80%) Strand = Plus / Plus Query: 16 caacgtcgcctccgaggaggtccggatggaggtctcatcgcagaaccccgacgacgggca 75 |||||| ||||| ||||||||||||| |||| || | ||| ||||||||||||| | Sbjct: 670 caacgtggcctcggaggaggtccggagggagctcgccgcgctccaccccgacgacggcga 729 Query: 76 gatcgtggtgcacaccaggggcgcctggaggatcaaggggataattcaggtg 127 | ||||||| ||| || | ||||| |||||| | |||||||| || |||||| Sbjct: 730 ggtcgtggtccacgcccgcggcgcgtggagggtgaaggggatcatccaggtg 781
>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone F20M13 (ESSA project) Length = 91938 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 121 tcaggtgtcaagatccattggtgatgtatacttgaa 156 |||||| |||||||||||||||||||| || ||||| Sbjct: 26484 tcaggtttcaagatccattggtgatgtgtatttgaa 26449
>ref|NM_197607.1| Oryza sativa (japonica cultivar-group) putative protein phosphatase 2C (OSJNBa0001O14.1), mRNA Length = 1649 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 129 caagatccattggtgatgtatacttgaagaaaccggagt 167 ||||||||||||| ||||| || ||||||||||||||| Sbjct: 1114 caagatccattggagatgtgtatctgaagaaaccggagt 1152
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 129 caagatccattggtgatgtatacttgaagaaaccggagt 167 ||||||||||||| ||||| || ||||||||||||||| Sbjct: 38950 caagatccattggagatgtgtatctgaagaaaccggagt 38988
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 129 caagatccattggtgatgtatacttgaagaaaccggagt 167 ||||||||||||| ||||| || ||||||||||||||| Sbjct: 20776551 caagatccattggagatgtgtatctgaagaaaccggagt 20776589
>dbj|AK119635.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F02, full insert sequence Length = 1791 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 129 caagatccattggtgatgtatacttgaagaaaccggagt 167 ||||||||||||| ||||| || ||||||||||||||| Sbjct: 971 caagatccattggagatgtgtatctgaagaaaccggagt 1009
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 129 caagatccattggtgatgtatacttgaagaaaccggagt 167 ||||||||||||| ||||| || ||||||||||||||| Sbjct: 20787815 caagatccattggagatgtgtatctgaagaaaccggagt 20787853
>gb|AY106533.1| Zea mays PCO124223 mRNA sequence Length = 2059 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 464 catttccacgacgacatcagtgtcgtcgtggtgtacctcgac 505 |||||||||||||| || | ||||||||||||| ||||||| Sbjct: 1466 catttccacgacgatataaccgtcgtcgtggtgttcctcgac 1507
>ref|NM_115363.3| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT3G55050 transcript variant AT3G55050.1 mRNA, complete cds Length = 1650 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 271 agatcagttcataatatttgcctcggacggtctttgggagcatct 315 ||||||||| | |||||||||||||| ||| | ||||||||||| Sbjct: 1157 agatcagtttcttatatttgcctcggatggtttatgggagcatct 1201 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 113 gggataattcaggtgtcaagatccattggtga 144 ||||| || ||||| ||||||||||||||||| Sbjct: 999 gggattatacaggtctcaagatccattggtga 1030
>ref|NM_202709.1| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT3G55050 transcript variant AT3G55050.2 mRNA, complete cds Length = 1767 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 271 agatcagttcataatatttgcctcggacggtctttgggagcatct 315 ||||||||| | |||||||||||||| ||| | ||||||||||| Sbjct: 1274 agatcagtttcttatatttgcctcggatggtttatgggagcatct 1318 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 113 gggataattcaggtgtcaagatccattggtga 144 ||||| || ||||| ||||||||||||||||| Sbjct: 1116 gggattatacaggtctcaagatccattggtga 1147
>ref|XM_473665.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1167 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 107 atcaaggggataattcaggtgtcaagatccattggtgatgtatacttgaagaa 159 ||||| || ||||| ||||| ||||| || || ||||||| |||||||||||| Sbjct: 661 atcaaaggcataatacaggtttcaaggtctataggtgatgcatacttgaagaa 713
>gb|BT014892.1| Arabidopsis thaliana At3g55050 mRNA, complete cds Length = 1556 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 271 agatcagttcataatatttgcctcggacggtctttgggagcatct 315 ||||||||| | |||||||||||||| ||| | ||||||||||| Sbjct: 1125 agatcagtttcttatatttgcctcggatggtttatgggagcatct 1169 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 113 gggataattcaggtgtcaagatccattggtga 144 ||||| || ||||| ||||||||||||||||| Sbjct: 967 gggattatacaggtctcaagatccattggtga 998
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 388 cgccttgaaggaggccacgaagaag 412 ||||||||||||| ||||||||||| Sbjct: 37251 cgccttgaaggagtccacgaagaag 37275
>emb|AL162393.15| Human DNA sequence from clone RP11-534I8 on chromosome 9 Contains a programmed cell death 2 (PDCD2) pseudogene, the 5' end of the gene for a novel C2H2 type zinc finger protein and two CpG islands, complete sequence Length = 184302 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tcaaaccaacagatcagttca 281 ||||||||||||||||||||| Sbjct: 135035 tcaaaccaacagatcagttca 135015
>emb|AL132970.2|ATT15C9 Arabidopsis thaliana DNA chromosome 3, BAC clone T15C9 Length = 84601 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 271 agatcagttcataatatttgcctcggacggtctttgggagcatct 315 ||||||||| | |||||||||||||| ||| | ||||||||||| Sbjct: 53949 agatcagtttcttatatttgcctcggatggtttatgggagcatct 53905 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 113 gggataattcaggtgtcaagatccattggtga 144 ||||| || ||||| ||||||||||||||||| Sbjct: 54107 gggattatacaggtctcaagatccattggtga 54076
>gb|BT021925.1| Arabidopsis thaliana At3g55050 gene, complete cds Length = 1155 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 271 agatcagttcataatatttgcctcggacggtctttgggagcatct 315 ||||||||| | |||||||||||||| ||| | ||||||||||| Sbjct: 843 agatcagtttcttatatttgcctcggatggtttatgggagcatct 887 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 113 gggataattcaggtgtcaagatccattggtga 144 ||||| || ||||| ||||||||||||||||| Sbjct: 685 gggattatacaggtctcaagatccattggtga 716
>emb|AJ302053.1|ATH302053 Arabidopsis thaliana PP2C6 gene for Ser/Thr protein phosphatase 2C, exons 1-2 Length = 1816 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 271 agatcagttcataatatttgcctcggacggtctttgggagcatct 315 ||||||||| | |||||||||||||| ||| | ||||||||||| Sbjct: 905 agatcagtttcttatatttgcctcggatggtttatgggagcatct 949 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 113 gggataattcaggtgtcaagatccattggtga 144 ||||| || ||||| ||||||||||||||||| Sbjct: 747 gggattatacaggtctcaagatccattggtga 778
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 cgacgacgggcagatcgtggt 84 ||||||||||||||||||||| Sbjct: 2280779 cgacgacgggcagatcgtggt 2280799
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 cggtccgccttgaaggaggc 402 |||||||||||||||||||| Sbjct: 1314578 cggtccgccttgaaggaggc 1314597
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gcaaattgtcttcaagaacc 353 |||||||||||||||||||| Sbjct: 3934893 gcaaattgtcttcaagaacc 3934912
>gb|AC116568.5| Mus musculus BAC clone RP23-34C4 from chromosome 8, complete sequence Length = 218715 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ggatcaaggggataattcag 124 |||||||||||||||||||| Sbjct: 105152 ggatcaaggggataattcag 105171
>ref|XM_388651.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08475.1) partial mRNA Length = 5055 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tgaaggaggccacgaagaag 412 |||||||||||||||||||| Sbjct: 2831 tgaaggaggccacgaagaag 2850
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 agttcataatatttgcctcg 295 |||||||||||||||||||| Sbjct: 2525287 agttcataatatttgcctcg 2525306
>emb|BX649515.7| Zebrafish DNA sequence from clone CH211-120F15 in linkage group 3, complete sequence Length = 153400 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 catgtccgcaagctcaaacc 267 |||||||||||||||||||| Sbjct: 97524 catgtccgcaagctcaaacc 97543
>dbj|AB089954.1| Micromonospora griseorubida gene cluster for the polyketide macrolide mycinamicin, partial and comeplete cds Length = 58343 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 ctcgaccggcaccggggtcg 519 |||||||||||||||||||| Sbjct: 48092 ctcgaccggcaccggggtcg 48111
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 64 cgacgacgggcagatcgtggtgcacacc 91 ||||| ||||||||||||||||| |||| Sbjct: 2865706 cgacggcgggcagatcgtggtgcgcacc 2865679
>gb|AC120394.10| Mus musculus chromosome 9, clone RP24-325N9, complete sequence Length = 206641 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 aattgtcttcaagaacccaa 356 |||||||||||||||||||| Sbjct: 135242 aattgtcttcaagaacccaa 135223
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cgacccaacgtcgcctccga 30 |||||||||||||||||||| Sbjct: 1036597 cgacccaacgtcgcctccga 1036578 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,209,556 Number of Sequences: 3902068 Number of extensions: 3209556 Number of successful extensions: 52267 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51789 Number of HSP's gapped (non-prelim): 465 length of query: 524 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 501 effective length of database: 17,143,297,704 effective search space: 8588792149704 effective search space used: 8588792149704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
