ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal34c19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197688.1| Oryza sativa (japonica cultivar-group) putative... 220 3e-54
2gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 141 2e-30
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 141 2e-30
5gb|BC077609.1| Xenopus laevis cDNA clone MGC:84581 IMAGE:6639504... 44 0.43
6emb|BX571829.7| Zebrafish DNA sequence from clone DKEY-256M7 in ... 44 0.43
7gb|DQ377274.1| Bacillus thuringiensis serovar oswaldocruzi strai... 44 0.43
8gb|AC004863.5|AC004863 Homo sapiens PAC clone RP4-708P22 from 7,... 42 1.7
9gb|AC131532.7| Homo sapiens 12 BAC RP11-408B11 (Roswell Park Can... 42 1.7
10ref|NM_118433.3| Arabidopsis thaliana unknown protein AT4G23040 ... 40 6.8
11ref|XM_415032.1| PREDICTED: Gallus gallus similar to Ankyrin rep... 40 6.8
12gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete seq... 40 6.8
13ref|XM_646561.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 40 6.8
14ref|XM_648037.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 40 6.8
15gb|AC113312.7| Mus musculus chromosome 7, clone RP23-440K7, comp... 40 6.8
16gb|AY142615.1| Arabidopsis thaliana unknown protein (At4g23040) ... 40 6.8
17gb|AF360264.1| Arabidopsis thaliana unknown protein (At4g23040) ... 40 6.8
18emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, ... 40 6.8
19emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BA... 40 6.8
20emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 i... 40 6.8
21emb|BX828365.1|CNS0A3YR Arabidopsis thaliana Full-length cDNA Co... 40 6.8
22emb|BX827495.1|CNS0A3M1 Arabidopsis thaliana Full-length cDNA Co... 40 6.8
23emb|BX284689.6| Zebrafish DNA sequence from clone CH211-106B10 i... 40 6.8
24gb|AC011754.8| Homo sapiens BAC clone RP11-546P22 from 2, comple... 40 6.8 
>ref|NM_197688.1| Oryza sativa (japonica cultivar-group) putative oxysterol-binding
           protein (OSJNBb0014I11.10), mRNA
          Length = 2229

 Score =  220 bits (111), Expect = 3e-54
 Identities = 295/356 (82%), Gaps = 4/356 (1%)
 Strand = Plus / Plus

                                                                       
Query: 148 ggatcattctctacagaaaagctaagagatcgcttgcatgctgaaggtgttggtgcagaa 207
           |||||||| || || |||||||| ||  ||||||||||||||||||||||||| |  | |
Sbjct: 547 ggatcattttccactgaaaagcttaggaatcgcttgcatgctgaaggtgttggagaggca 606

                                                                       
Query: 208 attgttaaagactgtgagcagatagttcattcggaattttcacagtatcatgtacagatg 267
           | | ||||||||||||| |||||  |||| || |||||||||||||||||    ||||||
Sbjct: 607 actattaaagactgtgaacagatcattcactcagaattttcacagtatcacactcagatg 666

                                                                       
Query: 268 aagcagcgctgtgaatcgtatttaagctttattggcagtcttccacgggaacttgag--- 324
           ||||| || ||||||   ||||||| ||| ||||||||||||||| |||||||||||   
Sbjct: 667 aagcaacggtgtgaagactatttaaacttcattggcagtcttccaagggaacttgaggta 726

                                                                       
Query: 325 -ttaattcagaagatgcaactattcatggcaatccacagtcgcagttgttcaagcctgac 383
            ||||||| | ||||||| ||  |  ||  || ||||||||| |||||||||| | ||||
Sbjct: 727 gttaattcgggagatgcatctgctattgagaagccacagtcggagttgttcaaacatgac 786

                                                                       
Query: 384 ctttccagctccggaaaatgtagtgaatacagcaatacagaatcttctgatgatgctggt 443
             ||||||||| |||||||||||||| |||||||| || |||||||||||||||||||| 
Sbjct: 787 tgttccagctctggaaaatgtagtgagtacagcaacactgaatcttctgatgatgctggc 846

                                                                   
Query: 444 aaacaagaaatagggataatgtcagatgaagacgagtttcatttctatgatacaag 499
           ||||||||  |||||    |||||||||| || |||||||||||||||||||||||
Sbjct: 847 aaacaagaggtagggcagttgtcagatgaggatgagtttcatttctatgatacaag 902



 Score =  141 bits (71), Expect = 2e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                       
Query: 19  attaccccaaccaagacacttcagctgaggacaggttgtgttaaggaccgtgtggcttgg 78
           ||||||||||||||||| |||||||||||||| || | || |||||||||||||||||||
Sbjct: 418 attaccccaaccaagacgcttcagctgaggactggctctgctaaggaccgtgtggcttgg 477

                                                  
Query: 79  attgaagcacttgtttcagcgagaagtgaatattctctt 117
           ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 478 attgaagcacttgtttctgcgaggagtgaatattctctt 516
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>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
              sequence
          Length = 135510

 Score =  141 bits (71), Expect = 2e-30
 Identities = 92/99 (92%)
 Strand = Plus / Minus

                                                                          
Query: 19     attaccccaaccaagacacttcagctgaggacaggttgtgttaaggaccgtgtggcttgg 78
              ||||||||||||||||| |||||||||||||| || | || |||||||||||||||||||
Sbjct: 102456 attaccccaaccaagacgcttcagctgaggactggctctgctaaggaccgtgtggcttgg 102397

                                                     
Query: 79     attgaagcacttgtttcagcgagaagtgaatattctctt 117
              ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 102396 attgaagcacttgtttctgcgaggagtgaatattctctt 102358



 Score =  127 bits (64), Expect = 4e-26
 Identities = 154/184 (83%)
 Strand = Plus / Minus

                                                                          
Query: 148    ggatcattctctacagaaaagctaagagatcgcttgcatgctgaaggtgttggtgcagaa 207
              |||||||| || || |||||||| ||  ||||||||||||||||||||||||| |  | |
Sbjct: 102327 ggatcattttccactgaaaagcttaggaatcgcttgcatgctgaaggtgttggagaggca 102268

                                                                          
Query: 208    attgttaaagactgtgagcagatagttcattcggaattttcacagtatcatgtacagatg 267
              | | ||||||||||||| |||||  |||| || |||||||||||||||||    ||||||
Sbjct: 102267 actattaaagactgtgaacagatcattcactcagaattttcacagtatcacactcagatg 102208

                                                                          
Query: 268    aagcagcgctgtgaatcgtatttaagctttattggcagtcttccacgggaacttgagtta 327
              ||||| || ||||||   ||||||| ||| ||||||||||||||| ||||||||||| ||
Sbjct: 102207 aagcaacggtgtgaagactatttaaacttcattggcagtcttccaagggaacttgaggta 102148

                  
Query: 328    attc 331
              ||||
Sbjct: 102147 attc 102144



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                          
Query: 411    tacagcaatacagaatcttctgatgatgctggtaaacaagaaatagggataatgtcagat 470
              |||||||| || |||||||||||||||||||| ||||||||  |||||    ||||||||
Sbjct: 101513 tacagcaacactgaatcttctgatgatgctggcaaacaagaggtagggcagttgtcagat 101454

                                           
Query: 471    gaagacgagtttcatttctatgatacaag 499
              || || |||||||||||||||||||||||
Sbjct: 101453 gaggatgagtttcatttctatgatacaag 101425



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                  
Query: 357    ccacagtcgcagttgttcaagcctgacctttccagctccggaaaatgtagtg 408
              ||||||||| |||||||||| | ||||  ||||||||| |||||||||||||
Sbjct: 101906 ccacagtcggagttgttcaaacatgactgttccagctctggaaaatgtagtg 101855
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  141 bits (71), Expect = 2e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                            
Query: 19       attaccccaaccaagacacttcagctgaggacaggttgtgttaaggaccgtgtggcttgg 78
                ||||||||||||||||| |||||||||||||| || | || |||||||||||||||||||
Sbjct: 21231903 attaccccaaccaagacgcttcagctgaggactggctctgctaaggaccgtgtggcttgg 21231962

                                                       
Query: 79       attgaagcacttgtttcagcgagaagtgaatattctctt 117
                ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 21231963 attgaagcacttgtttctgcgaggagtgaatattctctt 21232001



 Score =  127 bits (64), Expect = 4e-26
 Identities = 154/184 (83%)
 Strand = Plus / Plus

                                                                            
Query: 148      ggatcattctctacagaaaagctaagagatcgcttgcatgctgaaggtgttggtgcagaa 207
                |||||||| || || |||||||| ||  ||||||||||||||||||||||||| |  | |
Sbjct: 21232032 ggatcattttccactgaaaagcttaggaatcgcttgcatgctgaaggtgttggagaggca 21232091

                                                                            
Query: 208      attgttaaagactgtgagcagatagttcattcggaattttcacagtatcatgtacagatg 267
                | | ||||||||||||| |||||  |||| || |||||||||||||||||    ||||||
Sbjct: 21232092 actattaaagactgtgaacagatcattcactcagaattttcacagtatcacactcagatg 21232151

                                                                            
Query: 268      aagcagcgctgtgaatcgtatttaagctttattggcagtcttccacgggaacttgagtta 327
                ||||| || ||||||   ||||||| ||| ||||||||||||||| ||||||||||| ||
Sbjct: 21232152 aagcaacggtgtgaagactatttaaacttcattggcagtcttccaagggaacttgaggta 21232211

                    
Query: 328      attc 331
                ||||
Sbjct: 21232212 attc 21232215



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                            
Query: 411      tacagcaatacagaatcttctgatgatgctggtaaacaagaaatagggataatgtcagat 470
                |||||||| || |||||||||||||||||||| ||||||||  |||||    ||||||||
Sbjct: 21232846 tacagcaacactgaatcttctgatgatgctggcaaacaagaggtagggcagttgtcagat 21232905

                                             
Query: 471      gaagacgagtttcatttctatgatacaag 499
                || || |||||||||||||||||||||||
Sbjct: 21232906 gaggatgagtttcatttctatgatacaag 21232934



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 357      ccacagtcgcagttgttcaagcctgacctttccagctccggaaaatgtagtg 408
                ||||||||| |||||||||| | ||||  ||||||||| |||||||||||||
Sbjct: 21232453 ccacagtcggagttgttcaaacatgactgttccagctctggaaaatgtagtg 21232504
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  141 bits (71), Expect = 2e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                            
Query: 19       attaccccaaccaagacacttcagctgaggacaggttgtgttaaggaccgtgtggcttgg 78
                ||||||||||||||||| |||||||||||||| || | || |||||||||||||||||||
Sbjct: 21243167 attaccccaaccaagacgcttcagctgaggactggctctgctaaggaccgtgtggcttgg 21243226

                                                       
Query: 79       attgaagcacttgtttcagcgagaagtgaatattctctt 117
                ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 21243227 attgaagcacttgtttctgcgaggagtgaatattctctt 21243265



 Score =  127 bits (64), Expect = 4e-26
 Identities = 154/184 (83%)
 Strand = Plus / Plus

                                                                            
Query: 148      ggatcattctctacagaaaagctaagagatcgcttgcatgctgaaggtgttggtgcagaa 207
                |||||||| || || |||||||| ||  ||||||||||||||||||||||||| |  | |
Sbjct: 21243296 ggatcattttccactgaaaagcttaggaatcgcttgcatgctgaaggtgttggagaggca 21243355

                                                                            
Query: 208      attgttaaagactgtgagcagatagttcattcggaattttcacagtatcatgtacagatg 267
                | | ||||||||||||| |||||  |||| || |||||||||||||||||    ||||||
Sbjct: 21243356 actattaaagactgtgaacagatcattcactcagaattttcacagtatcacactcagatg 21243415

                                                                            
Query: 268      aagcagcgctgtgaatcgtatttaagctttattggcagtcttccacgggaacttgagtta 327
                ||||| || ||||||   ||||||| ||| ||||||||||||||| ||||||||||| ||
Sbjct: 21243416 aagcaacggtgtgaagactatttaaacttcattggcagtcttccaagggaacttgaggta 21243475

                    
Query: 328      attc 331
                ||||
Sbjct: 21243476 attc 21243479



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                            
Query: 411      tacagcaatacagaatcttctgatgatgctggtaaacaagaaatagggataatgtcagat 470
                |||||||| || |||||||||||||||||||| ||||||||  |||||    ||||||||
Sbjct: 21244110 tacagcaacactgaatcttctgatgatgctggcaaacaagaggtagggcagttgtcagat 21244169

                                             
Query: 471      gaagacgagtttcatttctatgatacaag 499
                || || |||||||||||||||||||||||
Sbjct: 21244170 gaggatgagtttcatttctatgatacaag 21244198



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 357      ccacagtcgcagttgttcaagcctgacctttccagctccggaaaatgtagtg 408
                ||||||||| |||||||||| | ||||  ||||||||| |||||||||||||
Sbjct: 21243717 ccacagtcggagttgttcaaacatgactgttccagctctggaaaatgtagtg 21243768
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>gb|BC077609.1| Xenopus laevis cDNA clone MGC:84581 IMAGE:6639504, complete cds
          Length = 2597

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 144  tggtggatcattctctacagaa 165
            ||||||||||||||||||||||
Sbjct: 1203 tggtggatcattctctacagaa 1224
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>emb|BX571829.7| Zebrafish DNA sequence from clone DKEY-256M7 in linkage group 12,
              complete sequence
          Length = 196942

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 448    aagaaatagggataatgtcaga 469
              ||||||||||||||||||||||
Sbjct: 165273 aagaaatagggataatgtcaga 165252
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>gb|DQ377274.1| Bacillus thuringiensis serovar oswaldocruzi strain IEBC-T38 001
           flagellin (hag) gene, partial cds
          Length = 1026

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 428 ttctgatgatgctggtaaacaa 449
           ||||||||||||||||||||||
Sbjct: 405 ttctgatgatgctggtaaacaa 426
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>gb|AC004863.5|AC004863 Homo sapiens PAC clone RP4-708P22 from 7, complete sequence
          Length = 133030

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 295   tttattggcagtcttccacgg 315
             |||||||||||||||||||||
Sbjct: 11666 tttattggcagtcttccacgg 11646
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>gb|AC131532.7| Homo sapiens 12 BAC RP11-408B11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 85167

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 288   tttaagctttattggcagtct 308
             |||||||||||||||||||||
Sbjct: 43309 tttaagctttattggcagtct 43289
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>ref|NM_118433.3| Arabidopsis thaliana unknown protein AT4G23040 mRNA, complete cds
          Length = 1819

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  cagaagatgcaactattcat 350
            ||||||||||||||||||||
Sbjct: 1022 cagaagatgcaactattcat 1041
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>ref|XM_415032.1| PREDICTED: Gallus gallus similar to Ankyrin repeat domain protein 5
            (LOC416735), mRNA
          Length = 4814

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 188  ctgaaggtgttggtgcagaa 207
            ||||||||||||||||||||
Sbjct: 4273 ctgaaggtgttggtgcagaa 4254
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>gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete sequence
          Length = 131049

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   tattctcttggtgctatttt 128
             ||||||||||||||||||||
Sbjct: 29033 tattctcttggtgctatttt 29014
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>ref|XM_646561.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (153.t00001) partial mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 444 aaacaagaaatagggataat 463
           ||||||||||||||||||||
Sbjct: 22  aaacaagaaatagggataat 41
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>ref|XM_648037.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (93.t00001) partial mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 444 aaacaagaaatagggataat 463
           ||||||||||||||||||||
Sbjct: 22  aaacaagaaatagggataat 41
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>gb|AC113312.7| Mus musculus chromosome 7, clone RP23-440K7, complete sequence
          Length = 215675

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   tgttggtgcagaaattgttaaaga 218
             ||||| ||||||||||||||||||
Sbjct: 72408 tgttgctgcagaaattgttaaaga 72431
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>gb|AY142615.1| Arabidopsis thaliana unknown protein (At4g23040) mRNA, complete cds
          Length = 1609

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 331 cagaagatgcaactattcat 350
           ||||||||||||||||||||
Sbjct: 902 cagaagatgcaactattcat 921
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>gb|AF360264.1| Arabidopsis thaliana unknown protein (At4g23040) mRNA, complete cds
          Length = 1832

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  cagaagatgcaactattcat 350
            ||||||||||||||||||||
Sbjct: 1019 cagaagatgcaactattcat 1038
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>emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 58
          Length = 193550

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    cagaagatgcaactattcat 350
              ||||||||||||||||||||
Sbjct: 119139 cagaagatgcaactattcat 119120
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>emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BAC clone F7H19 (ESSA project)
          Length = 139316

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   cagaagatgcaactattcat 350
             ||||||||||||||||||||
Sbjct: 90052 cagaagatgcaactattcat 90033
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>emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 in linkage group 24,
              complete sequence
          Length = 155029

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    gttggtgcagaaattgttaa 215
              ||||||||||||||||||||
Sbjct: 138046 gttggtgcagaaattgttaa 138027
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>emb|BX828365.1|CNS0A3YR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH80ZE07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1783

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  cagaagatgcaactattcat 350
            ||||||||||||||||||||
Sbjct: 1022 cagaagatgcaactattcat 1041
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>emb|BX827495.1|CNS0A3M1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS64ZG05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1768

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 331  cagaagatgcaactattcat 350
            ||||||||||||||||||||
Sbjct: 994  cagaagatgcaactattcat 1013
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>emb|BX284689.6| Zebrafish DNA sequence from clone CH211-106B10 in linkage group 14,
             complete sequence
          Length = 164905

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   tgaatacagcaatacagaat 426
             ||||||||||||||||||||
Sbjct: 82822 tgaatacagcaatacagaat 82841
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>gb|AC011754.8| Homo sapiens BAC clone RP11-546P22 from 2, complete sequence
          Length = 141704

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     ttcagctgaggacaggttgt 57
              ||||||||||||||||||||
Sbjct: 126747 ttcagctgaggacaggttgt 126728


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,578,842
Number of Sequences: 3902068
Number of extensions: 4578842
Number of successful extensions: 88904
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88811
Number of HSP's gapped (non-prelim): 81
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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