ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal33n19 |
|---|---|
| Clone Library Name | barley_pub |
>DCP2_MOUSE (Q9CYC6) mRNA decapping enzyme 2 (EC 3.-.-.-)| Length = 422 Score = 127 bits (319), Expect = 2e-29 Identities = 57/137 (41%), Positives = 85/137 (62%) Frame = +3 Query: 96 PQELLDDLCSRFVLNVPKEDLESFERILFLLEQAHWFYEDNSVEHNPSLKSLSFKDFTSL 275 P +LDDLCSRF+L++P E+ ++ R+ F +E AHWFY D +++ P L +DF Sbjct: 9 PGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQCGIRDFAKA 68 Query: 276 MFNSCAALRPYRAHLDDIYKDFTHYKFRVPVSGAIILDDNYDRCLLVKGWKSSASWSFPR 455 +F+ C L P ++ I ++ YK VP GAIILD+ + LLV+G+ + + W FP+ Sbjct: 69 VFSHCPFLLPQGEDVEKILDEWKEYKMGVPTYGAIILDETLENVLLVQGYLAKSGWGFPK 128 Query: 456 GKRSKDEEDHTCAVREV 506 GK +K+E H CA REV Sbjct: 129 GKVNKEEAPHDCAAREV 145
>DCP2_HUMAN (Q8IU60) mRNA decapping enzyme 2 (EC 3.-.-.-) (hDpc) (Nucleoside| diphosphate-linked moiety X motif 20) (Nudix motif 20) Length = 420 Score = 127 bits (318), Expect = 2e-29 Identities = 56/137 (40%), Positives = 85/137 (62%) Frame = +3 Query: 96 PQELLDDLCSRFVLNVPKEDLESFERILFLLEQAHWFYEDNSVEHNPSLKSLSFKDFTSL 275 P +LDDLCSRF+L++P E+ ++ R+ F +E AHWFY D +++ P L +DF Sbjct: 9 PGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQCGIRDFAKA 68 Query: 276 MFNSCAALRPYRAHLDDIYKDFTHYKFRVPVSGAIILDDNYDRCLLVKGWKSSASWSFPR 455 +F+ C L P ++ + ++ YK VP GAIILD+ + LLV+G+ + + W FP+ Sbjct: 69 VFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLAKSGWGFPK 128 Query: 456 GKRSKDEEDHTCAVREV 506 GK +K+E H CA REV Sbjct: 129 GKVNKEEAPHDCAAREV 145
>DCP2_PONPY (Q5REQ8) mRNA decapping enzyme 2 (EC 3.-.-.-)| Length = 385 Score = 127 bits (318), Expect = 2e-29 Identities = 56/137 (40%), Positives = 85/137 (62%) Frame = +3 Query: 96 PQELLDDLCSRFVLNVPKEDLESFERILFLLEQAHWFYEDNSVEHNPSLKSLSFKDFTSL 275 P +LDDLCSRF+L++P E+ ++ R+ F +E AHWFY D +++ P L +DF Sbjct: 9 PGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLSQCGIRDFAKA 68 Query: 276 MFNSCAALRPYRAHLDDIYKDFTHYKFRVPVSGAIILDDNYDRCLLVKGWKSSASWSFPR 455 +F+ C L P ++ + ++ YK VP GAIILD+ + LLV+G+ + + W FP+ Sbjct: 69 VFSHCPFLLPEGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLAKSGWGFPK 128 Query: 456 GKRSKDEEDHTCAVREV 506 GK +K+E H CA REV Sbjct: 129 GKVNKEEAPHDCAAREV 145
>DCP2_YEAST (P53550) mRNA decapping enzyme 2 (EC 3.-.-.-) (Protein PSU1)| Length = 970 Score = 121 bits (304), Expect = 9e-28 Identities = 62/134 (46%), Positives = 82/134 (61%) Frame = +3 Query: 105 LLDDLCSRFVLNVPKEDLESFERILFLLEQAHWFYEDNSVEHNPSLKSLSFKDFTSLMFN 284 +L+DL RF++N P EDL S ER LF E+A WFY D NP+L SL K F L+ Sbjct: 18 ILEDLLVRFIINCPNEDLSSVERELFHFEEASWFYTDFIKLMNPTLPSLKIKSFAQLIIK 77 Query: 285 SCAALRPYRAHLDDIYKDFTHYKFRVPVSGAIILDDNYDRCLLVKGWKSSASWSFPRGKR 464 C + + +D+ + F+ YK +PV GA I ++N + LLV+G +S SWSFPRGK Sbjct: 78 LCPLVWKWDIRVDEALQQFSKYKKSIPVRGAAIFNENLSKILLVQGTESD-SWSFPRGKI 136 Query: 465 SKDEEDHTCAVREV 506 SKDE D C +REV Sbjct: 137 SKDENDIDCCIREV 150
>DCP2_ASHGO (Q75BK1) mRNA decapping enzyme 2 (EC 3.-.-.-)| Length = 880 Score = 115 bits (287), Expect = 9e-26 Identities = 60/137 (43%), Positives = 86/137 (62%), Gaps = 1/137 (0%) Frame = +3 Query: 99 QELLDDLCSRFVLNVPKEDLESFERILFLLEQAHWFYEDNSVEHNPSLKSLSFKDFTSLM 278 + L+DL RF++NVP EDL + ER LF E+A WFY D NP L ++ FK F S + Sbjct: 15 ERALEDLIVRFIINVPPEDLATVERELFHFEEAQWFYTDFVKLTNPHLPNMKFKTFASYV 74 Query: 279 FNSCAALRPYR-AHLDDIYKDFTHYKFRVPVSGAIILDDNYDRCLLVKGWKSSASWSFPR 455 + C + ++ + ++ + F+ YK +PV GA I ++ ++ LLVKG +S SWSFPR Sbjct: 75 ISLCPLVWKWQDVNPEEALQKFSKYKKSIPVRGAAIFNETLNKILLVKGTESD-SWSFPR 133 Query: 456 GKRSKDEEDHTCAVREV 506 GK SKDE+D C +REV Sbjct: 134 GKISKDEDDVDCCIREV 150
>NDX5_CAEEL (O62255) Putative nudix hydrolase 5 (EC 3.6.1.-) (mRNA decapping| enzyme 2 homolog) Length = 367 Score = 88.6 bits (218), Expect = 9e-18 Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 3/139 (2%) Frame = +3 Query: 96 PQELLDDLCSRFVLNVPKEDLESFERILFLLEQAHWFYEDNSVEHNP--SLKSLSFKDFT 269 P ++LD+L RF+ N+ + ++ R+ F LE AHW+Y D+ VE + ++ +DF Sbjct: 173 PTDILDELEFRFISNMVECEINDNIRVCFHLELAHWYYIDHMVEDDKISGCPNVGSRDFN 232 Query: 270 SLMFNSCAALRPYRAHLDDIYKDFTHYKFRVPVSGAIILDDNYDRCLLVKGW-KSSASWS 446 M C LR Y D++ F YK VP GAI++D D +LV+ + +W Sbjct: 233 FQMCQHCRVLRKYAHRADEVLAKFREYKSTVPTYGAILVDPEMDHVVLVQSYFAKGKNWG 292 Query: 447 FPRGKRSKDEEDHTCAVRE 503 FP+GK ++ E A+RE Sbjct: 293 FPKGKINQAEPPRDAAIRE 311
>D250_ASFB7 (P32092) Protein D250R| Length = 250 Score = 34.7 bits (78), Expect = 0.15 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%) Frame = +3 Query: 381 ILDDNYDRCL-LVKGWKSSAS--WSFPRGKRSKDEEDHTCAVRE 503 +L DN + + L+ K S + W P+GK +DE D TCA+RE Sbjct: 104 LLPDNGKKLISLINQAKGSGTLLWEIPKGKPKEDESDLTCAIRE 147
>PYRG_BUCAI (P57491) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 545 Score = 32.0 bits (71), Expect = 0.98 Identities = 13/31 (41%), Positives = 22/31 (70%) Frame = +3 Query: 90 LPPQELLDDLCSRFVLNVPKEDLESFERILF 182 L Q+L D +C+ F LNVP+ DL+ +E +++ Sbjct: 251 LKNQKLDDYICNYFKLNVPEADLQEWEEVIY 281
>Y243_BUCBP (Q89AM4) UPF0274 protein bbp_243| Length = 217 Score = 32.0 bits (71), Expect = 0.98 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 9/93 (9%) Frame = +3 Query: 213 DNSVEHNPSLKSLSFKDFTSLMFNSCAALRPYRAHLD---DIYKD-FTHYKFRVPVSGAI 380 +N +E+N K++ FK+ + L+ + Y D IY D + FR+ VSG+ Sbjct: 98 ENRLENNIKYKNILFKELSILIQQHKNRVYTYDLLADRLAQIYLDTVSKLGFRIQVSGSK 157 Query: 381 -----ILDDNYDRCLLVKGWKSSASWSFPRGKR 464 I+ N RC+L+ G +++ W G+R Sbjct: 158 KVLHNIVIQNKIRCILLSGIRATMLWKQIGGRR 190
>PYRG_VIBVY (Q7MHQ0) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 545 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%) Frame = +3 Query: 87 QLPPQELLDDL-CSRFVLNVPKEDLESFERILF 182 QL + LDDL C+RF +N P+ DL +E++++ Sbjct: 249 QLIKSQGLDDLVCARFGINAPEADLSEWEQVIY 281
>PYRG_VIBVU (Q8DC63) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 545 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%) Frame = +3 Query: 87 QLPPQELLDDL-CSRFVLNVPKEDLESFERILF 182 QL + LDDL C+RF +N P+ DL +E++++ Sbjct: 249 QLIKSQGLDDLVCARFGINAPEADLSEWEQVIY 281
>US02_EHV1K (P32517) US1 protein| Length = 303 Score = 31.2 bits (69), Expect = 1.7 Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = -3 Query: 273 GR*SP*RRGT*GRGCAPRSCPRRTSAPAPAGTGSARTT---PGPPWARSAR 130 GR P RR + G APR RR+ APAPA + +A T PG P A +AR Sbjct: 234 GRPLPRRRPSEGGMRAPR---RRSRAPAPARSTAAAATPPRPGDPRAPAAR 281
>XRCC1_MOUSE (Q60596) DNA-repair protein XRCC1 (X-ray repair cross-complementing| protein 1) Length = 631 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 5/37 (13%) Frame = -3 Query: 219 SCPRRTSAPAPAGTGSARTTPGPPWA-----RSARTG 124 S P RT A APA T + R PG P R ARTG Sbjct: 276 SVPSRTPAAAPASTPAQRAVPGKPRGEGTEPRGARTG 312
>NUDT6_XENLA (P13420) Nucleoside diphosphate-linked moiety X motif 6 (Nudix| motif 6) (Protein GFG) Length = 217 Score = 31.2 bits (69), Expect = 1.7 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +3 Query: 357 RVPVSGAIILDDNYDRCLLVKGWKSSASWSFPRGKRSKDEEDHTCAVREV 506 +V V+GA++ +DN ++ K+ +W FP G + E+ AVREV Sbjct: 44 QVGVAGAVLDEDNGKVLVVQDRNKTVNAWKFPGGLSDQGEDIGATAVREV 93
>PYRG_VIBCH (Q9KPC4) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 544 Score = 30.8 bits (68), Expect = 2.2 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%) Frame = +3 Query: 87 QLPPQELLDDL-CSRFVLNVPKEDLESFERILF 182 QL + LDDL C+RF +N P+ DL +E++++ Sbjct: 248 QLIRSQGLDDLVCARFGINAPEADLSEWEQVIY 280
>ACN1_CAEEL (Q18581) Inactive angiotensin-converting enzyme-related protein| precursor (ACE-like non-metallopeptidase protein 1) Length = 906 Score = 30.8 bits (68), Expect = 2.2 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = +3 Query: 87 QLPPQELLDDLCSRFVLNVPKEDLESFERILFLLEQAHWFYE--DNSVEHN 233 +L P E LD S + + KE LESF ++ F + +W YE D +V N Sbjct: 580 KLVPSEHLDIKDSVIINKLYKESLESFTKLPFTIAADNWRYELFDGTVPKN 630
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 30.4 bits (67), Expect = 2.9 Identities = 21/79 (26%), Positives = 27/79 (34%) Frame = -3 Query: 240 GRGCAPRSCPRRTSAPAPAGTGSARTTPGPPWARSARTGCRDRRXXXXXXXXXATMTG*V 61 GR AP+ R SAP+PA G ++ P DR Sbjct: 61 GRPAAPKKAAPRPSAPSPAQAGPSQAAP----------AAGDRAAAPRPSAAPKAPAAQQ 110 Query: 60 PRRPPSPSTAHSLSRSPAP 4 P P +P+ A S P P Sbjct: 111 PAAPSAPAPAPSQGPRPTP 129
>PYRG_SHIFL (P0A7E8) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 544 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 90 LPPQELLDDLCSRFVLNVPKEDLESFERILF 182 L Q L D +C RF LN P+ +L +E+++F Sbjct: 250 LKSQGLDDYICKRFSLNCPEANLSEWEQVIF 280
>PYRG_ECOLI (P0A7E5) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 544 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 90 LPPQELLDDLCSRFVLNVPKEDLESFERILF 182 L Q L D +C RF LN P+ +L +E+++F Sbjct: 250 LKSQGLDDYICKRFSLNCPEANLSEWEQVIF 280
>PYRG_ECOL6 (P0A7E6) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 544 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 90 LPPQELLDDLCSRFVLNVPKEDLESFERILF 182 L Q L D +C RF LN P+ +L +E+++F Sbjct: 250 LKSQGLDDYICKRFSLNCPEANLSEWEQVIF 280
>PYRG_ECO57 (P0A7E7) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 544 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3 Query: 90 LPPQELLDDLCSRFVLNVPKEDLESFERILF 182 L Q L D +C RF LN P+ +L +E+++F Sbjct: 250 LKSQGLDDYICKRFSLNCPEANLSEWEQVIF 280
>ODP2_MYCPN (P75392) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) Length = 402 Score = 30.0 bits (66), Expect = 3.7 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -3 Query: 240 GRGCAPRSCPRRTSAPAPAGTGSARTTPGP 151 G G A + P+ SAPAPA T + TP P Sbjct: 79 GAGAAAPAAPQPVSAPAPAPTPTFTPTPAP 108
>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) Length = 650 Score = 30.0 bits (66), Expect = 3.7 Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Frame = -3 Query: 255 RRGT*GRGCAPRSCPRRTSAPAPAGTG-----SARTTPGPPWA--RSARTGCRDRR 109 R G G G PRS R S P PAG G +A PG P++ R A ++RR Sbjct: 454 RAGETGAGPLPRSLSRSNSLPHPAGGGKAGGPNASMEPGIPFSIGRFATLTLQERR 509
>DMWD_HUMAN (Q09019) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) (Protein 59) (Fragment) Length = 553 Score = 30.0 bits (66), Expect = 3.7 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Frame = -3 Query: 255 RRGT*GRGCAPRSCPRRTSAPAPAGTGSA-----RTTPGPPWA--RSARTGCRDRR 109 R G G G PRS R S P PAG G A PG P++ R A ++RR Sbjct: 356 RGGEPGPGPLPRSLSRSNSLPHPAGGGKAGGPGVAAEPGTPFSIGRFATLTLQERR 411
>SIZ1_ARATH (Q680Q4) Sumoylation ligase E3 (EC 6.-.-.-) (SUMO E3 ligase)| (AtSIZ1) Length = 884 Score = 30.0 bits (66), Expect = 3.7 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +3 Query: 369 SGAIILDDNYDRCLLVKGWKSSASWSFPRGKRSKDEEDH 485 + +++L N R K +S +SFPR KRS +E+DH Sbjct: 827 TASLLLGMNDSRQDKAKKQRSDNPFSFPRQKRSNNEQDH 865
>P2RX6_HUMAN (O15547) P2X purinoceptor 6 (ATP receptor) (P2X6) (Purinergic| receptor) (P2XM) (Purinergic receptor P2X-like 1) Length = 431 Score = 29.6 bits (65), Expect = 4.9 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -3 Query: 216 CPRRTSAPAPAGTGSARTTPGPPW 145 C RR+SAPAP T + T P W Sbjct: 392 CLRRSSAPAPTATAAGSQTQTPGW 415
>BCN1_PIG (Q4A1L5) Beclin-1| Length = 448 Score = 29.6 bits (65), Expect = 4.9 Identities = 18/53 (33%), Positives = 33/53 (62%) Frame = +3 Query: 105 LLDDLCSRFVLNVPKEDLESFERILFLLEQAHWFYEDNSVEHNPSLKSLSFKD 263 LLD L ++ LNV + + ++++R L +LEQ H ED+S + L+ L+ ++ Sbjct: 142 LLDQLDTQ--LNVTENECQNYKRCLEILEQMH---EDDSEQLRMELRELALEE 189
>APS1_SCHPO (Q09790) Diphosphoinositol polyphosphate phosphohydrolase aps1 (EC| 3.6.1.52) (Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase) (EC 3.6.1.-) (Ap6A hydrolase) Length = 210 Score = 29.3 bits (64), Expect = 6.4 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +3 Query: 369 SGAIILDDNYDRCLLVKGWKSSASWSFPRGKRSKDEEDHTCAVRE 503 +G + L + + LLV K SW P+G DE A+RE Sbjct: 45 AGVVALSADKRKVLLVSSAKKHPSWVVPKGGWEADESVQQAALRE 89
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 29.3 bits (64), Expect = 6.4 Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Frame = -3 Query: 237 RGCAPRSCPRRTSAPAPAGTGSARTTPGPPWARSARTGCRDRRXXX-----XXXXXXATM 73 R +PR P P+P R P PP R +R+ R RR ++ Sbjct: 307 RSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSR 366 Query: 72 TG*VPRRPPS-----PSTAHSLSRSPAP 4 + P++PP P LS S +P Sbjct: 367 SRSPPKKPPKRTSSPPRKTRRLSPSASP 394
>ISY1_MOUSE (Q69ZQ2) Pre-mRNA-splicing factor ISY1 homolog| Length = 285 Score = 29.3 bits (64), Expect = 6.4 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = +3 Query: 336 DFTHYKFRVPVSGAII-LDDNYDRCL---LVKGWKSSASWSFPRGKRSKDEED 482 DF +Y + G I+ L+ Y++ L LV+ WK+ RG++ ++EE+ Sbjct: 156 DFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEE 208
>ISY1_HUMAN (Q9ULR0) Pre-mRNA-splicing factor ISY1 homolog| Length = 331 Score = 29.3 bits (64), Expect = 6.4 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = +3 Query: 336 DFTHYKFRVPVSGAII-LDDNYDRCL---LVKGWKSSASWSFPRGKRSKDEED 482 DF +Y + G I+ L+ Y++ L LV+ WK+ RG++ ++EE+ Sbjct: 156 DFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEE 208
>Y480_MYCTU (Q11146) Hypothetical UPF0012 protein Rv0480c/MT0498 (EC 3.5.-.-)| Length = 340 Score = 29.3 bits (64), Expect = 6.4 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -3 Query: 201 SAPAPAGTGSARTTPGPPW-ARSARTGCRDRR 109 + PAPA G+AR++PG W AR R R R Sbjct: 3 ACPAPARAGTARSSPGASWIARLLRAPVRRAR 34
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 29.3 bits (64), Expect = 6.4 Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 10/88 (11%) Frame = -3 Query: 237 RGCAPRSCPRRTSAPAPAGTGSARTTPGPPWARSARTGCRDRRXXX-----XXXXXXATM 73 R +PR P P+P R P PP R +R+ R RR ++ Sbjct: 307 RSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSR 366 Query: 72 TG*VPRRPPS-----PSTAHSLSRSPAP 4 + P++PP P LS S +P Sbjct: 367 SRSPPKKPPKRTSSPPRKTRRLSPSASP 394
>PYRG_SALTY (P65921) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 544 Score = 29.3 bits (64), Expect = 6.4 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +3 Query: 90 LPPQELLDDLCSRFVLNVPKEDLESFERILF 182 L Q L D +C RF LN P+ +L +E++++ Sbjct: 250 LKSQGLDDYICKRFSLNCPEANLSEWEQVIY 280
>PYRG_SALTI (P65922) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 544 Score = 29.3 bits (64), Expect = 6.4 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +3 Query: 90 LPPQELLDDLCSRFVLNVPKEDLESFERILF 182 L Q L D +C RF LN P+ +L +E++++ Sbjct: 250 LKSQGLDDYICKRFSLNCPEANLSEWEQVIY 280
>ISY1_RAT (Q6AYB3) Pre-mRNA-splicing factor ISY1 homolog| Length = 284 Score = 29.3 bits (64), Expect = 6.4 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = +3 Query: 336 DFTHYKFRVPVSGAII-LDDNYDRCL---LVKGWKSSASWSFPRGKRSKDEED 482 DF +Y + G I+ L+ Y++ L LV+ WK+ RG++ ++EE+ Sbjct: 156 DFEYYGYLDEDDGVIVPLEQEYEKRLRAELVEKWKAEREARLARGEKEEEEEE 208
>SP5_MOUSE (Q9JHX2) Transcription factor Sp5| Length = 398 Score = 24.6 bits (52), Expect(2) = 8.3 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -3 Query: 60 PRRPPSPSTAHSLSRSPAP 4 P PP P T LS +PAP Sbjct: 166 PPPPPPPPTCRQLSPAPAP 184 Score = 22.7 bits (47), Expect(2) = 8.3 Identities = 10/28 (35%), Positives = 11/28 (39%) Frame = -3 Query: 231 CAPRSCPRRTSAPAPAGTGSARTTPGPP 148 CAP P A P G + P PP Sbjct: 142 CAPAYVPYAAQAALPPGYSNLLPPPPPP 169
>SP5_HUMAN (Q6BEB4) Transcription factor Sp5| Length = 398 Score = 24.6 bits (52), Expect(2) = 8.3 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -3 Query: 60 PRRPPSPSTAHSLSRSPAP 4 P PP P T LS +PAP Sbjct: 166 PPPPPPPPTCRQLSPNPAP 184 Score = 22.7 bits (47), Expect(2) = 8.3 Identities = 10/28 (35%), Positives = 11/28 (39%) Frame = -3 Query: 231 CAPRSCPRRTSAPAPAGTGSARTTPGPP 148 CAP P A P G + P PP Sbjct: 142 CAPAYVPYAAQAALPPGYSNLLPPPPPP 169
>ESX1L_HUMAN (Q8N693) Extraembryonic, spermatogenesis, homeobox 1-like protein| Length = 406 Score = 28.9 bits (63), Expect = 8.3 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = -3 Query: 198 APAPAGTGSARTTPGPPWAR 139 AP P G AR PGPP AR Sbjct: 310 APVPTGPPMARVPPGPPMAR 329
>EFG1_GEOSL (Q74A61) Elongation factor G 1 (EF-G 1)| Length = 689 Score = 28.9 bits (63), Expect = 8.3 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 6/73 (8%) Frame = +2 Query: 5 GAGERESEWAVD------GDGGRRGTQPVIVXXXXXXXXXXRRSLQPVRAERAQGGPGVV 166 G GE E VD G G + G V+ R + + QGG ++ Sbjct: 450 GMGELHLEVVVDRLQREFGVGVKTGRPQVVYRETITRAVERREIFRAEHEGKVQGGEVLL 509 Query: 167 RADPVPAGAGALV 205 + P+P GAG V Sbjct: 510 QLSPLPRGAGVRV 522
>EF2_SULTO (Q975H5) Elongation factor 2 (EF-2)| Length = 736 Score = 28.9 bits (63), Expect = 8.3 Identities = 17/65 (26%), Positives = 33/65 (50%) Frame = +3 Query: 147 KEDLESFERILFLLEQAHWFYEDNSVEHNPSLKSLSFKDFTSLMFNSCAALRPYRAHLDD 326 KED++S E L EQA W Y++ + K ++ + ++ N+ + ++ R +D Sbjct: 514 KEDMDSKEMARILKEQADWDYDE-------AKKIVAIDENINVFVNATSGVQHLREVMDT 566 Query: 327 IYKDF 341 I + F Sbjct: 567 ILQGF 571
>R1_CITRE (Q8LPT9) Alpha-glucan water dikinase, chloroplast precursor (EC| 2.7.9.4) (Starch-related R1 protein) Length = 1475 Score = 28.9 bits (63), Expect = 8.3 Identities = 20/74 (27%), Positives = 32/74 (43%) Frame = +3 Query: 225 EHNPSLKSLSFKDFTSLMFNSCAALRPYRAHLDDIYKDFTHYKFRVPVSGAIILDDNYDR 404 +HN LK L F D A + Y + + ++ + + A+ LDDN D Sbjct: 856 KHNDRLKDLLFLDIALESSVRTAIEKGYEELNEAGPEKIMYFVSLILENLALSLDDNEDL 915 Query: 405 CLLVKGWKSSASWS 446 +KGW ++ S S Sbjct: 916 IYCLKGWSNALSMS 929
>YKR4_EBV (P30117) Hypothetical protein BKRF4| Length = 217 Score = 28.9 bits (63), Expect = 8.3 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -3 Query: 225 PRS-CPRRTSAPAPA-GTGSARTTPGPPWARSARTGCRDRRXXXXXXXXXATMTG*VPRR 52 PR+ P R APAP G SA P P +S + R + G PRR Sbjct: 133 PRTRAPPRPPAPAPVRGRASAPPRPPAPVQQSTKDKGPHRPTRP-------VLRGPAPRR 185 Query: 51 PPSPSTAHSLSR 16 PP PS+ ++ ++ Sbjct: 186 PPPPSSPNTYNK 197 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,936,981 Number of Sequences: 219361 Number of extensions: 876373 Number of successful extensions: 4802 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 4014 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4742 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
