| Clone Name | baal34c16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475101.1| Triticum aestivum H-protein mRNA, partial cds Length = 570 Score = 430 bits (217), Expect = e-117 Identities = 355/401 (88%), Gaps = 3/401 (0%) Strand = Plus / Plus Query: 175 gggagcaggcatggcgggggacgggga---ggagccgccagcgatgggcggcgacaagct 231 |||||||| ||||||||||||||| || ||||| ||| |||||||||||||||||||| Sbjct: 166 gggagcagccatggcgggggacggcgacgaggagcggccggcgatgggcggcgacaagct 225 Query: 232 gatactgcgggggctgcagttccacgggttccacggcgtgaagcaggaggagaagaagct 291 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 226 gatcctgcgggggctgcagttccacggcttccacggcgtgaagcaggaggagaagaagct 285 Query: 292 cggccagaagttcgtcattgacgtcgacgcctggatggacctcgccaccgccggggactc 351 ||| ||||||||||| | ||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 286 cgggcagaagttcgtggtcgacgtggacgcctggatggacctcgccgccgccggggactc 345 Query: 352 cgacgacatctcccacaccgtcagctacagcgacatctacaggatagccaagggtgtggt 411 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct: 346 cgacgacatctcccacaccgtcagctacaccgacatctacaggatagccaagggcgtggt 405 Query: 412 agaaggtccgtcgcataaccttttggagtcagtggctcaatcgattgccaacaccacgct 471 || || ||||||| ||||| |||||||| ||||| || ||||| ||| ||||||||| Sbjct: 406 ggagggcccgtcgcgcaacctcttggagtcngtggcgcagtcgatcgccggcaccacgct 465 Query: 472 gctcaagttccctccgatctctgctgttcgagtgaaggtggggaaacctcatgtcgcggt 531 |||| ||||||| | ||||| | || || |||||||| ||||| || || |||||||| Sbjct: 466 gctcgagttcccccanatctccggcgtccgggtgaaggtcgggaagccccacgtcgcggt 525 Query: 532 gcaaggcgtcgtggactacttgggagtggagatactgaggc 572 ||| ||||||||||||||| | || |||||||||||||||| Sbjct: 526 gcagggcgtcgtggactacctcggggtggagatactgaggc 566
>gb|BT008966.1| Triticum aestivum clone wdk1c.pk013.k22:fis, full insert mRNA sequence Length = 759 Score = 404 bits (204), Expect = e-109 Identities = 370/424 (87%), Gaps = 6/424 (1%) Strand = Plus / Plus Query: 175 gggagcaggcatggcgggggacggggagga---gccgccagcgatgggcggcgacaagct 231 ||||||| ||||||||||||||||||||| | ||| ||||||||||| |||||||| Sbjct: 120 gggagcaaccatggcgggggacggggaggacgaggtgccggcgatgggcggagacaagct 179 Query: 232 gatactgcgggggctgcagttccacgggttccacggcgtgaagcaggaggagaagaagct 291 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 180 gatcctgcgggggctgcagttccacggcttccacggcgtgaagcaggaggagaagaagct 239 Query: 292 cggccagaagttcgtcattgacgtcgacgcctggatggacctcgccaccgccggggactc 351 |||||||||||||| | ||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 240 gggccagaagttcgtggtcgacgtggacgcctggatggacctcgccgccgccggggactc 299 Query: 352 cgacgacatctcccacaccgtcagctacagcgacatctacaggatagccaagggtgtggt 411 |||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct: 300 cgacgacatcgcccacaccgtcagctacaccgacatctacaggatagccaagggcgtggt 359 Query: 412 agaaggtccgtcgcataaccttttggagtcagtggctcaatcgattgccaacaccacgct 471 ||||| ||||||| ||||| ||||||| ||||| || ||||| ||| ||||||||| Sbjct: 360 ggaaggcccgtcgcggaacctcctggagtcggtggcgcagtcgatcgccggcaccacgct 419 Query: 472 gctcaagttccctccgatctctgctgttcgagtgaaggtggggaaacctcatgtcgcggt 531 |||| |||| || | |||||| || || || |||||||| ||||| || || |||||||| Sbjct: 420 gctcgagtttccccagatctccgccgtccgggtgaaggtcgggaagccccacgtcgcggt 479 Query: 532 gcaaggcgtcgtggactacttgggagtggagatact---gaggcacagaaaggcatgagc 588 ||| |||||||| |||||| | || ||||||||||| ||||| |||| |||||||||| Sbjct: 480 gcagggcgtcgtcgactacctcggggtggagatactgaggaggcgcagagaggcatgagc 539 Query: 589 acaa 592 |||| Sbjct: 540 acaa 543
>ref|XM_483735.1| Oryza sativa (japonica cultivar-group), mRNA Length = 623 Score = 337 bits (170), Expect = 3e-89 Identities = 317/366 (86%) Strand = Plus / Plus Query: 221 ggcgacaagctgatactgcgggggctgcagttccacgggttccacggcgtgaagcaggag 280 |||||||||||||| ||||||||||||| |||||| || |||||| ||||||| ||| Sbjct: 52 ggcgacaagctgatcctgcgggggctgcggttccatggcacccacggggtgaagccagag 111 Query: 281 gagaagaagctcggccagaagttcgtcattgacgtcgacgcctggatggacctcgccacc 340 ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 112 gagaagaagctgggccagaagttcgtcatcgacgtcgacgcctggatggatctcgccgcc 171 Query: 341 gccggggactccgacgacatctcccacaccgtcagctacagcgacatctacaggatagcc 400 |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| Sbjct: 172 gccggggactccgacgacatctccgacaccgtcagctacaccgaaatctacaggatagcc 231 Query: 401 aagggtgtggtagaaggtccgtcgcataaccttttggagtcagtggctcaatcgattgcc 460 ||| ||| || ||||| |||||||| || || ||||| || |||||||| |||||||| Sbjct: 232 aagaatgtagtcgaaggcccgtcgcacaatctgttggaatcggtggctcagtcgattgca 291 Query: 461 aacaccacgctgctcaagttccctccgatctctgctgttcgagtgaaggtggggaaacct 520 ||| | || |||||||||||||||| ||| ||||| |||||||||||||| | ||||||| Sbjct: 292 aactcaaccctgctcaagttccctcagatttctgcagttcgagtgaaggttgagaaacct 351 Query: 521 catgtcgcggtgcaaggcgtcgtggactacttgggagtggagatactgaggcacagaaag 580 ||||| || || || || ||| | ||||| ||||| ||||||||| | ||||| ||||| Sbjct: 352 catgttgctgttcagggagtcctcgactatttgggcgtggagatattcaggcagagaaaa 411 Query: 581 gcatga 586 |||||| Sbjct: 412 gcatga 417
>dbj|AK121222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090H22, full insert sequence Length = 623 Score = 337 bits (170), Expect = 3e-89 Identities = 317/366 (86%) Strand = Plus / Plus Query: 221 ggcgacaagctgatactgcgggggctgcagttccacgggttccacggcgtgaagcaggag 280 |||||||||||||| ||||||||||||| |||||| || |||||| ||||||| ||| Sbjct: 52 ggcgacaagctgatcctgcgggggctgcggttccatggcacccacggggtgaagccagag 111 Query: 281 gagaagaagctcggccagaagttcgtcattgacgtcgacgcctggatggacctcgccacc 340 ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 112 gagaagaagctgggccagaagttcgtcatcgacgtcgacgcctggatggatctcgccgcc 171 Query: 341 gccggggactccgacgacatctcccacaccgtcagctacagcgacatctacaggatagcc 400 |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||| Sbjct: 172 gccggggactccgacgacatctccgacaccgtcagctacaccgaaatctacaggatagcc 231 Query: 401 aagggtgtggtagaaggtccgtcgcataaccttttggagtcagtggctcaatcgattgcc 460 ||| ||| || ||||| |||||||| || || ||||| || |||||||| |||||||| Sbjct: 232 aagaatgtagtcgaaggcccgtcgcacaatctgttggaatcggtggctcagtcgattgca 291 Query: 461 aacaccacgctgctcaagttccctccgatctctgctgttcgagtgaaggtggggaaacct 520 ||| | || |||||||||||||||| ||| ||||| |||||||||||||| | ||||||| Sbjct: 292 aactcaaccctgctcaagttccctcagatttctgcagttcgagtgaaggttgagaaacct 351 Query: 521 catgtcgcggtgcaaggcgtcgtggactacttgggagtggagatactgaggcacagaaag 580 ||||| || || || || ||| | ||||| ||||| ||||||||| | ||||| ||||| Sbjct: 352 catgttgctgttcagggagtcctcgactatttgggcgtggagatattcaggcagagaaaa 411 Query: 581 gcatga 586 |||||| Sbjct: 412 gcatga 417
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 218 bits (110), Expect = 2e-53 Identities = 158/174 (90%) Strand = Plus / Plus Query: 221 ggcgacaagctgatactgcgggggctgcagttccacgggttccacggcgtgaagcaggag 280 |||||||||||||| ||||||||||||| |||||| || |||||| ||||||| ||| Sbjct: 27825890 ggcgacaagctgatcctgcgggggctgcggttccatggcacccacggggtgaagccagag 27825949 Query: 281 gagaagaagctcggccagaagttcgtcattgacgtcgacgcctggatggacctcgccacc 340 ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 27825950 gagaagaagctgggccagaagttcgtcatcgacgtcgacgcctggatggatctcgccgcc 27826009 Query: 341 gccggggactccgacgacatctcccacaccgtcagctacagcgacatctacagg 394 |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| Sbjct: 27826010 gccggggactccgacgacatctccgacaccgtcagctacaccgaaatctacagg 27826063 Score = 125 bits (63), Expect = 2e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 392 aggatagccaagggtgtggtagaaggtccgtcgcataaccttttggagtcagtggctcaa 451 |||||||||||| ||| || ||||| |||||||| || || ||||| || |||||||| Sbjct: 27826490 aggatagccaagaatgtagtcgaaggcccgtcgcacaatctgttggaatcggtggctcag 27826549 Query: 452 tcgattgccaacaccacgctgctcaagttccctccgatctctgctgttcgagtgaaggtg 511 |||||||| ||| | || |||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 27826550 tcgattgcaaactcaaccctgctcaagttccctcagatttctgcagttcgagtgaaggtt 27826609 Query: 512 gggaaacctcatgtcgcggtgcaaggcgtcgtggactacttgggagtggagatactgagg 571 | |||||||||||| || || || || ||| | ||||| ||||| ||||||||| | ||| Sbjct: 27826610 gagaaacctcatgttgctgttcagggagtcctcgactatttgggcgtggagatattcagg 27826669 Query: 572 cacagaaaggcatga 586 || ||||| |||||| Sbjct: 27826670 cagagaaaagcatga 27826684 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ggacctcgccaccgccgggg 347 |||||||||||||||||||| Sbjct: 28335498 ggacctcgccaccgccgggg 28335479
>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0439B07 Length = 89475 Score = 218 bits (110), Expect = 2e-53 Identities = 158/174 (90%) Strand = Plus / Plus Query: 221 ggcgacaagctgatactgcgggggctgcagttccacgggttccacggcgtgaagcaggag 280 |||||||||||||| ||||||||||||| |||||| || |||||| ||||||| ||| Sbjct: 80347 ggcgacaagctgatcctgcgggggctgcggttccatggcacccacggggtgaagccagag 80406 Query: 281 gagaagaagctcggccagaagttcgtcattgacgtcgacgcctggatggacctcgccacc 340 ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 80407 gagaagaagctgggccagaagttcgtcatcgacgtcgacgcctggatggatctcgccgcc 80466 Query: 341 gccggggactccgacgacatctcccacaccgtcagctacagcgacatctacagg 394 |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| Sbjct: 80467 gccggggactccgacgacatctccgacaccgtcagctacaccgaaatctacagg 80520 Score = 125 bits (63), Expect = 2e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 392 aggatagccaagggtgtggtagaaggtccgtcgcataaccttttggagtcagtggctcaa 451 |||||||||||| ||| || ||||| |||||||| || || ||||| || |||||||| Sbjct: 80947 aggatagccaagaatgtagtcgaaggcccgtcgcacaatctgttggaatcggtggctcag 81006 Query: 452 tcgattgccaacaccacgctgctcaagttccctccgatctctgctgttcgagtgaaggtg 511 |||||||| ||| | || |||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 81007 tcgattgcaaactcaaccctgctcaagttccctcagatttctgcagttcgagtgaaggtt 81066 Query: 512 gggaaacctcatgtcgcggtgcaaggcgtcgtggactacttgggagtggagatactgagg 571 | |||||||||||| || || || || ||| | ||||| ||||| ||||||||| | ||| Sbjct: 81067 gagaaacctcatgttgctgttcagggagtcctcgactatttgggcgtggagatattcagg 81126 Query: 572 cacagaaaggcatga 586 || ||||| |||||| Sbjct: 81127 cagagaaaagcatga 81141
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 218 bits (110), Expect = 2e-53 Identities = 158/174 (90%) Strand = Plus / Plus Query: 221 ggcgacaagctgatactgcgggggctgcagttccacgggttccacggcgtgaagcaggag 280 |||||||||||||| ||||||||||||| |||||| || |||||| ||||||| ||| Sbjct: 33968 ggcgacaagctgatcctgcgggggctgcggttccatggcacccacggggtgaagccagag 34027 Query: 281 gagaagaagctcggccagaagttcgtcattgacgtcgacgcctggatggacctcgccacc 340 ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 34028 gagaagaagctgggccagaagttcgtcatcgacgtcgacgcctggatggatctcgccgcc 34087 Query: 341 gccggggactccgacgacatctcccacaccgtcagctacagcgacatctacagg 394 |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| Sbjct: 34088 gccggggactccgacgacatctccgacaccgtcagctacaccgaaatctacagg 34141 Score = 125 bits (63), Expect = 2e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 392 aggatagccaagggtgtggtagaaggtccgtcgcataaccttttggagtcagtggctcaa 451 |||||||||||| ||| || ||||| |||||||| || || ||||| || |||||||| Sbjct: 34568 aggatagccaagaatgtagtcgaaggcccgtcgcacaatctgttggaatcggtggctcag 34627 Query: 452 tcgattgccaacaccacgctgctcaagttccctccgatctctgctgttcgagtgaaggtg 511 |||||||| ||| | || |||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 34628 tcgattgcaaactcaaccctgctcaagttccctcagatttctgcagttcgagtgaaggtt 34687 Query: 512 gggaaacctcatgtcgcggtgcaaggcgtcgtggactacttgggagtggagatactgagg 571 | |||||||||||| || || || || ||| | ||||| ||||| ||||||||| | ||| Sbjct: 34688 gagaaacctcatgttgctgttcagggagtcctcgactatttgggcgtggagatattcagg 34747 Query: 572 cacagaaaggcatga 586 || ||||| |||||| Sbjct: 34748 cagagaaaagcatga 34762
>emb|AL445465.10| Human DNA sequence from clone RP11-415D17 on chromosome 6 Contains two novel genes, part of a novel gene, a ubiquitin-conjugating enzyme E2 family pseudogene and a CpG island, complete sequence Length = 126388 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 645 tttctgtgtcttatttgtaaaat 667 ||||||||||||||||||||||| Sbjct: 91898 tttctgtgtcttatttgtaaaat 91920
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.16 Identities = 65/79 (82%) Strand = Plus / Plus Query: 501 gagtgaaggtggggaaacctcatgtcgcggtgcaaggcgtcgtggactacttgggagtgg 560 ||||||| || |||||||||||||| ||||| ||||| |||| || || || || || | Sbjct: 21973166 gagtgaaagttgggaaacctcatgttgcggtacaaggaatcgtcgattatttaggcgttg 21973225 Query: 561 agatactgaggcacagaaa 579 ||||| ||||| ||||||| Sbjct: 21973226 agatattgaggtacagaaa 21973244 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 334 cgccaccgccggggactccgacgac 358 ||||||||||| ||||||||||||| Sbjct: 3437737 cgccaccgccgaggactccgacgac 3437713 Score = 40.1 bits (20), Expect = 9.6 Identities = 53/64 (82%) Strand = Plus / Plus Query: 387 tctacaggatagccaagggtgtggtagaaggtccgtcgcataaccttttggagtcagtgg 446 |||| ||||| ||||||| ||| || ||||| || |||| |||||||||||| |||| | Sbjct: 21973052 tctataggattgccaaggatgttgttgaaggcccatcgcggaaccttttggaggcagtag 21973111 Query: 447 ctca 450 |||| Sbjct: 21973112 ctca 21973115
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 46.1 bits (23), Expect = 0.16 Identities = 65/79 (82%) Strand = Plus / Plus Query: 501 gagtgaaggtggggaaacctcatgtcgcggtgcaaggcgtcgtggactacttgggagtgg 560 ||||||| || |||||||||||||| ||||| ||||| |||| || || || || || | Sbjct: 15230 gagtgaaagttgggaaacctcatgttgcggtacaaggaatcgtcgattatttaggcgttg 15289 Query: 561 agatactgaggcacagaaa 579 ||||| ||||| ||||||| Sbjct: 15290 agatattgaggtacagaaa 15308 Score = 40.1 bits (20), Expect = 9.6 Identities = 53/64 (82%) Strand = Plus / Plus Query: 387 tctacaggatagccaagggtgtggtagaaggtccgtcgcataaccttttggagtcagtgg 446 |||| ||||| ||||||| ||| || ||||| || |||| |||||||||||| |||| | Sbjct: 15116 tctataggattgccaaggatgttgttgaaggcccatcgcggaaccttttggaggcagtag 15175 Query: 447 ctca 450 |||| Sbjct: 15176 ctca 15179
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 46.1 bits (23), Expect = 0.16 Identities = 65/79 (82%) Strand = Plus / Plus Query: 501 gagtgaaggtggggaaacctcatgtcgcggtgcaaggcgtcgtggactacttgggagtgg 560 ||||||| || |||||||||||||| ||||| ||||| |||| || || || || || | Sbjct: 103883 gagtgaaagttgggaaacctcatgttgcggtacaaggaatcgtcgattatttaggcgttg 103942 Query: 561 agatactgaggcacagaaa 579 ||||| ||||| ||||||| Sbjct: 103943 agatattgaggtacagaaa 103961 Score = 40.1 bits (20), Expect = 9.6 Identities = 53/64 (82%) Strand = Plus / Plus Query: 387 tctacaggatagccaagggtgtggtagaaggtccgtcgcataaccttttggagtcagtgg 446 |||| ||||| ||||||| ||| || ||||| || |||| |||||||||||| |||| | Sbjct: 103769 tctataggattgccaaggatgttgttgaaggcccatcgcggaaccttttggaggcagtag 103828 Query: 447 ctca 450 |||| Sbjct: 103829 ctca 103832
>dbj|AK071381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089I18, full insert sequence Length = 968 Score = 46.1 bits (23), Expect = 0.16 Identities = 65/79 (82%) Strand = Plus / Plus Query: 501 gagtgaaggtggggaaacctcatgtcgcggtgcaaggcgtcgtggactacttgggagtgg 560 ||||||| || |||||||||||||| ||||| ||||| |||| || || || || || | Sbjct: 640 gagtgaaagttgggaaacctcatgttgcggtacaaggaatcgtcgattatttaggcgttg 699 Query: 561 agatactgaggcacagaaa 579 ||||| ||||| ||||||| Sbjct: 700 agatattgaggtacagaaa 718 Score = 44.1 bits (22), Expect = 0.61 Identities = 52/62 (83%) Strand = Plus / Plus Query: 389 tacaggatagccaagggtgtggtagaaggtccgtcgcataaccttttggagtcagtggct 448 |||||||| ||||||| ||| || ||||| || |||| |||||||||||| |||| ||| Sbjct: 528 tacaggattgccaaggatgttgttgaaggcccatcgcggaaccttttggaggcagtagct 587 Query: 449 ca 450 || Sbjct: 588 ca 589
>ref|XM_744077.1| Aspergillus fumigatus Af293 diaminopropionate ammonia-lyase (Afu2g00340) partial mRNA Length = 1401 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 tctcccacaccgtcagctacag 381 |||||||||||||||||||||| Sbjct: 1238 tctcccacaccgtcagctacag 1217
>emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L3 on chromosome 1p35.1-36.13 Contains a novel gene, the gene for a novel protein (LOC374960), a ribosomal protein S14 (RPS14) pseudogene, the NBL1 gene for neuroblastoma suppression of tumorigenicity 1, the HTR6 gene for 5-hydroxytryptamine (serotonin) receptor 6, the 3' end of the gene for a novel protein (LOC255104) (FLJ45636) and two CpG islands, complete sequence Length = 163848 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 560 gagatactgaggcacagaaagg 581 |||||||||||||||||||||| Sbjct: 42327 gagatactgaggcacagaaagg 42306
>dbj|AP003160.1| Homo sapiens genomic DNA, chromosome 1p36 clone:956M3, complete sequence Length = 130080 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 560 gagatactgaggcacagaaagg 581 |||||||||||||||||||||| Sbjct: 84766 gagatactgaggcacagaaagg 84787
>gb|AC157556.12| Mus musculus chromosome 1, clone RP24-267A19, complete sequence Length = 198267 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 641 ctgatttctgtgtcttatttg 661 ||||||||||||||||||||| Sbjct: 28543 ctgatttctgtgtcttatttg 28523
>ref|XM_450245.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 334 cgccaccgccggggactccgacgac 358 ||||||||||| ||||||||||||| Sbjct: 490 cgccaccgccgaggactccgacgac 514
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 gctcggccagaagttcgtcat 309 ||||||||||||||||||||| Sbjct: 1439494 gctcggccagaagttcgtcat 1439474
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 ggcggcgggtgagcgcacgat 155 ||||||||||||||||||||| Sbjct: 3736966 ggcggcgggtgagcgcacgat 3736946
>gb|AC142270.4| Mus musculus BAC clone RP24-115G23 from chromosome 3, complete sequence Length = 170870 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 gccaagggtgtggtagaaggt 418 ||||||||||||||||||||| Sbjct: 15732 gccaagggtgtggtagaaggt 15712
>gb|AC109805.8| Mus musculus chromosome 3, clone RP23-91D14, complete sequence Length = 171006 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 gccaagggtgtggtagaaggt 418 ||||||||||||||||||||| Sbjct: 13849 gccaagggtgtggtagaaggt 13829
>gb|AC111140.11| Mus musculus chromosome 3, clone RP23-369L16, complete sequence Length = 236182 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 672 tgttgattgtgttcttactct 692 ||||||||||||||||||||| Sbjct: 156372 tgttgattgtgttcttactct 156352
>gb|AC165165.3| Mus musculus BAC clone RP23-121B15 from chromosome 3, complete sequence Length = 228648 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 gccaagggtgtggtagaaggt 418 ||||||||||||||||||||| Sbjct: 50058 gccaagggtgtggtagaaggt 50078
>emb|Z77249.2|HS358H7 Human DNA sequence from clone RP3-358H7 on chromosome X Contains a DEAD-box protein pseudogene and the gene for a novel E2F-like protein (LOC51270), complete sequence Length = 148864 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 561 agatactgaggcacagaaagg 581 ||||||||||||||||||||| Sbjct: 110549 agatactgaggcacagaaagg 110529
>emb|AL731566.7| Human DNA sequence from clone RP11-500G22 on chromosome 10 Contains the 5' end of the ATE1 gene for arginyltransferase 1, a novel gene, the gene for a novel protein (FLJ20003), the 5' end of the TACC2 gene for transforming, acidic coiled-coil containing protein 2 (AZU-1) and three CpG islands, complete sequence Length = 125922 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 cacctgcaggctccctgctcc 75 ||||||||||||||||||||| Sbjct: 103396 cacctgcaggctccctgctcc 103416
>emb|AL139824.22| Human DNA sequence from clone RP11-380D15 on chromosome 20 Contains the MC3R gene for melanocortin 3 receptor, a zinc finger pseudogene and a novel gene, complete sequence Length = 193144 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 557 gtggagatactgaggcacagaaagg 581 |||||||||||||||| |||||||| Sbjct: 57248 gtggagatactgaggctcagaaagg 57272
>emb|AL137801.11| Human DNA sequence from clone RP4-609B14 on chromosome 1q42.11-42.3 Contains the gene for a novel protein (DKFZp547B1713), the 5' end of the GNPAT gene for glyceronephosphate O-acyltransferase and a CpG island, complete sequence Length = 54486 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 557 gtggagatactgaggcacagaaagg 581 |||| |||||||||||||||||||| Sbjct: 1246 gtggggatactgaggcacagaaagg 1222
>emb|AL138752.5| Human DNA sequence from clone RP11-3J10 on chromosome 9p12-13.3 Contains the 3' end of the SHB gene for SHB (Src homology 2 domain containing) adaptor protein B, the MCART1 gene for mitochondrial carrier triple repeat 1 (MGC14836), a novel gene, a novel pseudogene, a phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS) pseudogene, a novel gene (MGC10765,FLJ23201), a mitochondrial ribosomal protein S10 (MRP-S10, FLJ10567, PNAS-122) (MRPS10) psueodgene, the gene for exosome component RRP40, a novel gene (FLJ31455) and four CpG islands, complete sequence Length = 189271 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 556 agtggagatactgaggcacagaaag 580 ||||||||||||||||| ||||||| Sbjct: 4476 agtggagatactgaggcccagaaag 4500
>emb|AL109810.13|HS1097F14 Human DNA sequence from clone RP5-1097F14 on chromosome 1q42.13-43 Contains a peptidylprolyl isomerase A (cyclophilin A) pseudogene (PPIA), the gene for a novel protein similar to tripartite motif-containing 9 (TRIM9), a novel gene and three CpG islands, complete sequence Length = 123657 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 557 gtggagatactgaggcacagaaagg 581 |||| |||||||||||||||||||| Sbjct: 122903 gtggggatactgaggcacagaaagg 122879
>emb|AL031279.1|HS163O16 Human DNA sequence from clone RP1-163O16 on chromosome 1p35.1-36.13 Contains CA repeat, STS, complete sequence Length = 135628 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 556 agtggagatactgaggcacagaaag 580 ||||||||||||||||| ||||||| Sbjct: 72739 agtggagatactgaggcccagaaag 72763
>ref|NM_001016227.2| Xenopus tropicalis zinc finger protein 289, ID1 regulated (znf289), mRNA Length = 3414 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gaagcaggaggagaagaagct 291 ||||||||||||||||||||| Sbjct: 887 gaagcaggaggagaagaagct 907
>ref|NM_001004342.2| Homo sapiens tripartite motif-containing 67 (TRIM67), mRNA Length = 3929 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 557 gtggagatactgaggcacagaaagg 581 |||| |||||||||||||||||||| Sbjct: 2386 gtggggatactgaggcacagaaagg 2362
>emb|CR627464.1| Homo sapiens mRNA; cDNA DKFZp547N093 (from clone DKFZp547N093) Length = 1314 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 557 gtggagatactgaggcacagaaagg 581 |||| |||||||||||||||||||| Sbjct: 1232 gtggggatactgaggcacagaaagg 1208
>dbj|AK126782.1| Homo sapiens cDNA FLJ44831 fis, clone BRACE3047482, moderately similar to Homo sapiens tripartite motif-containing 9 (TRIM9) Length = 3929 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 557 gtggagatactgaggcacagaaagg 581 |||| |||||||||||||||||||| Sbjct: 2386 gtggggatactgaggcacagaaagg 2362
>dbj|AK055338.1| Homo sapiens cDNA FLJ30776 fis, clone FEBRA2000793 Length = 3546 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 557 gtggagatactgaggcacagaaagg 581 |||| |||||||||||||||||||| Sbjct: 2017 gtggggatactgaggcacagaaagg 1993
>gb|AC096750.3| Homo sapiens BAC clone RP11-426F15 from 4, complete sequence Length = 159618 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 tagccaagggtgtggtagaag 416 ||||||||||||||||||||| Sbjct: 28063 tagccaagggtgtggtagaag 28043
>gb|AC159297.3| Mus musculus BAC clone RP23-258F9 from chromosome 12, complete sequence Length = 193434 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 tgttgattgtgttcttactct 692 ||||||||||||||||||||| Sbjct: 134795 tgttgattgtgttcttactct 134815
>ref|NM_001015850.1| Xenopus tropicalis MGC97866 protein (MGC97866), mRNA Length = 3435 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gaagcaggaggagaagaagct 291 ||||||||||||||||||||| Sbjct: 902 gaagcaggaggagaagaagct 922
>gb|AC016909.9| Homo sapiens BAC clone RP11-458A7 from 2, complete sequence Length = 155535 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 557 gtggagatactgaggcacaga 577 ||||||||||||||||||||| Sbjct: 128058 gtggagatactgaggcacaga 128038
>gb|BC090141.1| Xenopus tropicalis MGC97866 protein, mRNA (cDNA clone MGC:97866 IMAGE:6994512), complete cds Length = 3435 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gaagcaggaggagaagaagct 291 ||||||||||||||||||||| Sbjct: 902 gaagcaggaggagaagaagct 922
>gb|AC138553.3| Ornithorhynchus anatinus clone OA_Bb-524H4, complete sequence Length = 144677 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gggacggggaggagccgccag 212 ||||||||||||||||||||| Sbjct: 133583 gggacggggaggagccgccag 133603
>gb|AC079773.8| Homo sapiens BAC clone RP11-258B17 from 2, complete sequence Length = 129676 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ggctccctgctccggccgccc 83 ||||||||||||||||||||| Sbjct: 60059 ggctccctgctccggccgccc 60079
>ref|XM_573265.1| PREDICTED: Rattus norvegicus similar to putative SH3BGR protein (LOC498066), mRNA Length = 1085 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 556 agtggagatactgaggcacagaaag 580 |||||||| |||||||||||||||| Sbjct: 434 agtggagaaactgaggcacagaaag 458
>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0069P02 Length = 163033 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 334 cgccaccgccggggactccgacgac 358 ||||||||||| ||||||||||||| Sbjct: 153669 cgccaccgccgaggactccgacgac 153645
>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1058_F03 Length = 150486 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 334 cgccaccgccggggactccgacgac 358 ||||||||||| ||||||||||||| Sbjct: 106218 cgccaccgccgaggactccgacgac 106194
>dbj|AK109459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C04, full insert sequence Length = 1959 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 334 cgccaccgccggggactccgacgac 358 ||||||||||| ||||||||||||| Sbjct: 490 cgccaccgccgaggactccgacgac 514
>emb|AL021222.1|HS673J10T H.sapiens STS from genomic clone 673J10 Length = 484 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 561 agatactgaggcacagaaagg 581 ||||||||||||||||||||| Sbjct: 269 agatactgaggcacagaaagg 249
>emb|CR926298.2| Xenopus tropicalis finished cDNA, clone TEgg043a17 Length = 3414 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gaagcaggaggagaagaagct 291 ||||||||||||||||||||| Sbjct: 887 gaagcaggaggagaagaagct 907
>gb|AC131774.4| Mus musculus BAC clone RP24-311P6 from 12, complete sequence Length = 150645 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 672 tgttgattgtgttcttactct 692 ||||||||||||||||||||| Sbjct: 50185 tgttgattgtgttcttactct 50205
>emb|AL672303.5| Mouse DNA sequence from clone RP23-461A6 on chromosome X, complete sequence Length = 200875 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 641 ctgatttctgtgtcttatttgtaaa 665 ||||||||||||| ||||||||||| Sbjct: 9847 ctgatttctgtgttttatttgtaaa 9871
>dbj|D13509.1|MUSPAPA Mus musculus mRNA for PAP homologous protein, complete cds Length = 745 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 tcccccgggctgaggaattcg 21 ||||||||||||||||||||| Sbjct: 573 tcccccgggctgaggaattcg 553
>emb|AL591864.14| Mouse DNA sequence from clone RP23-21H3 on chromosome 15, complete sequence Length = 143342 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 672 tgttgattgtgttcttactct 692 ||||||||||||||||||||| Sbjct: 81483 tgttgattgtgttcttactct 81463
>gb|AC121552.14| Mus musculus chromosome 19, clone RP24-145I16, complete sequence Length = 179737 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 673 gttgattgtgttcttactct 692 |||||||||||||||||||| Sbjct: 159078 gttgattgtgttcttactct 159097
>ref|XM_483836.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2096 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 ggacctcgccaccgccgggg 347 |||||||||||||||||||| Sbjct: 376 ggacctcgccaccgccgggg 395
>ref|XM_522388.1| PREDICTED: Pan troglodytes similar to keratin, hair, basic, 5; hard keratin, type II, 5 (LOC466988), mRNA Length = 1524 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 353 gcgtgaagcaggaggagaag 372
>ref|XM_522386.1| PREDICTED: Pan troglodytes similar to type II hair keratin 3 (LOC466986), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 317 gcgtgaagcaggaggagaag 336
>ref|XM_522385.1| PREDICTED: Pan troglodytes similar to keratin, hair, basic, 6; hard keratin, type II, 6 (LOC466985), mRNA Length = 1539 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 302 gcgtgaagcaggaggagaag 321
>ref|XM_522384.1| PREDICTED: Pan troglodytes similar to keratin, hair, basic, 1; hard keratin, type II, 1 (LOC466984), mRNA Length = 1596 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 302 gcgtgaagcaggaggagaag 321
>ref|XM_515944.1| PREDICTED: Pan troglodytes similar to N2B-Titin Isoform (LOC459781), mRNA Length = 18405 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 16968 agatactgaggcacagaaag 16987
>ref|XM_524843.1| PREDICTED: Pan troglodytes similar to Ski oncogene (C-ski) (LOC469459), mRNA Length = 1734 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 965 gcgtgaagcaggaggagaag 984
>gb|AC166934.3| Mus musculus chromosome 5, clone RP23-246A17, complete sequence Length = 144203 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 658 tttgtaaaatgtggtgttga 677 |||||||||||||||||||| Sbjct: 139711 tttgtaaaatgtggtgttga 139730
>gb|AY329622.1| Homo sapiens zinc finger protein 9 (ZNF9) gene, complete cds Length = 14461 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 647 tctgtgtcttatttgtaaaa 666 |||||||||||||||||||| Sbjct: 6622 tctgtgtcttatttgtaaaa 6603
>gb|AY329614.1| Homo sapiens ZNF9 gene, intron 1 and CL3N58 repeat region Length = 12004 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 647 tctgtgtcttatttgtaaaa 666 |||||||||||||||||||| Sbjct: 6357 tctgtgtcttatttgtaaaa 6338
>gb|AC091274.11| Mus musculus chromosome 5, clone RP23-149A1, complete sequence Length = 212532 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tttgtaaaatgtggtgttga 677 |||||||||||||||||||| Sbjct: 106745 tttgtaaaatgtggtgttga 106726
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ggtgagcgcacgatcgatcg 161 |||||||||||||||||||| Sbjct: 3175661 ggtgagcgcacgatcgatcg 3175680
>gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's Hospital Oakland Research Institute) complete sequence Length = 204000 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 catggcgggggacggggagg 203 |||||||||||||||||||| Sbjct: 145893 catggcgggggacggggagg 145874
>gb|AC132440.3| Mus musculus BAC clone RP23-239I24 from chromosome 8, complete sequence Length = 183218 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 550 cttgggagtggagatactgaggca 573 |||| ||||||||||||||||||| Sbjct: 177628 cttgtgagtggagatactgaggca 177651
>ref|NM_133378.2| Homo sapiens titin (TTN), transcript variant N2-A, mRNA Length = 101518 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 99058 agatactgaggcacagaaag 99077
>ref|NM_003319.2| Homo sapiens titin (TTN), transcript variant N2-B, mRNA Length = 82027 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 79567 agatactgaggcacagaaag 79586
>ref|NM_133432.1| Homo sapiens titin (TTN), transcript variant novex-1, mRNA Length = 82402 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 79942 agatactgaggcacagaaag 79961
>ref|NM_133437.1| Homo sapiens titin (TTN), transcript variant novex-2, mRNA Length = 82603 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 80143 agatactgaggcacagaaag 80162
>ref|NM_003036.1| Homo sapiens v-ski sarcoma viral oncogene homolog (avian) (SKI), mRNA Length = 3511 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 1781 gcgtgaagcaggaggagaag 1800
>ref|NM_002283.2| Homo sapiens keratin, hair, basic, 5 (KRTHB5), mRNA Length = 2508 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 473 gcgtgaagcaggaggagaag 492
>ref|NG_000944.1| Homo sapiens keratin, hair, basic pseudogene 4 (KRTHBP4) on chromosome 12 Length = 9721 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 1107 gcgtgaagcaggaggagaag 1126
>gb|AC131653.4| Mus musculus BAC clone RP23-220N8 from chromosome 19, complete sequence Length = 168365 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 673 gttgattgtgttcttactct 692 |||||||||||||||||||| Sbjct: 103364 gttgattgtgttcttactct 103345
>ref|XM_546730.2| PREDICTED: Canis familiaris similar to Ski oncogene (C-ski) (LOC489610), mRNA Length = 2373 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 1895 gcgtgaagcaggaggagaag 1914
>emb|AL731541.6| Human DNA sequence from clone RP11-472K8 on chromosome 10 Contains the 3' end of the CDH23 gene for cadherin related 23, a novel gene (FLJ00041 PP2135), the 3' end of the PSAP gene for prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) (GLBA, SAP1), a novel gene (FLJ00245) and a CpG island, complete sequence Length = 178254 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 gacctcacctgcaggctccctgct 73 |||||| ||||||||||||||||| Sbjct: 44580 gacctctcctgcaggctccctgct 44557
>emb|AL590822.36| Human DNA sequence from clone RP11-181G12 on chromosome 1 Contains the 3' end of the PRKCZ gene for protein kinase C zeta, a novel gene, a novel gene (FLJ31031), the SKI gene for v-ski sarcoma viral oncogene homolog (avian) and five CpG islands, complete sequence Length = 179836 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 163393 gcgtgaagcaggaggagaag 163412
>emb|AL158196.24| Human DNA sequence from clone RP11-90M2 on chromosome 13 Contains gene FLJ10956, the gene for HSPC126 protein (DRIP36), a novel gene similar to polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa (POLR2K), a novel gene and two CpG islands, complete sequence Length = 152594 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cccaaccctccacccaccca 111 |||||||||||||||||||| Sbjct: 99921 cccaaccctccacccaccca 99902
>gb|AC008149.14| Homo sapiens 12 BAC RP11-394J1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 96995 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 gatactgaggcacagaaagg 581 |||||||||||||||||||| Sbjct: 61424 gatactgaggcacagaaagg 61405
>gb|AC119801.14| Mus musculus, clone RP23-54N13, complete sequence Length = 251756 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 673 gttgattgtgttcttactct 692 |||||||||||||||||||| Sbjct: 232405 gttgattgtgttcttactct 232386
>emb|AL031984.13|HS173D1 Human DNA sequence from clone RP1-173D1 on chromosome 1p36.21-36.33 Contains the 5' UTR of the gene for a novel protein (FLJ34970, FLJ20321) and a CpG island, complete sequence Length = 117338 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 tggagatactgaggcacagaaagg 581 |||||| ||||||||||||||||| Sbjct: 22626 tggagaaactgaggcacagaaagg 22603
>emb|AL022316.2|HS126B4 Human DNA sequence from clone CTA-126B4 on chromosome 22q13.2-13.31, complete sequence Length = 156212 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cccaaccctccacccaccca 111 |||||||||||||||||||| Sbjct: 17820 cccaaccctccacccaccca 17839
>emb|Y19210.1|HSDNAHB5 Homo sapiens KRTHB5 gene for type II hair keratin 5, exons 1 to 9 Length = 9851 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 1882 gcgtgaagcaggaggagaag 1901
>emb|Y19208.1|HSDNAHB3 Homo sapiens KRTHB3 gene for type II hair keratin 3, exons 1 to 9 Length = 9358 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 1759 gcgtgaagcaggaggagaag 1778
>emb|Y13621.1|HSGHHKB1 Homo sapiens ghHKb1 gene Length = 5847 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 595 gcgtgaagcaggaggagaag 614
>emb|X99142.1|HSHHB6 H.sapiens mRNA for hair keratin, hHb6 Length = 2046 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 293 gcgtgaagcaggaggagaag 312
>emb|X99141.1|HSHHB3 H.sapiens mRNA for hair keratin, hHb3 Length = 1881 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 369 gcgtgaagcaggaggagaag 388
>emb|X99140.1|HSHHB5 H.sapiens mRNA for hair keratin, hHb5 Length = 2454 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 419 gcgtgaagcaggaggagaag 438
>emb|X81420.1|HSHKB1 H.sapiens mRNA for hHKb1 protein Length = 1637 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 64 gcgtgaagcaggaggagaag 83
>emb|X69490.1|HSTITIN H.sapiens mRNA for titin Length = 14985 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 12516 agatactgaggcacagaaag 12535
>ref|NM_002282.2| Homo sapiens keratin, hair, basic, 3 (KRTHB3), mRNA Length = 1883 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 369 gcgtgaagcaggaggagaag 388
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 313 cgtcgacgcctggatggacctcgc 336 |||||||| ||||||||||||||| Sbjct: 54946 cgtcgacggctggatggacctcgc 54969
>emb|AL713647.1|HSM802973 Homo sapiens mRNA; cDNA DKFZp451A172 (from clone DKFZp451A172) Length = 4825 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 2262 agatactgaggcacagaaag 2281
>emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin Length = 294540 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 291265 agatactgaggcacagaaag 291284 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 agtggagatactgaggcacagaaa 579 |||||||| ||||||||||||||| Sbjct: 54498 agtggagaaactgaggcacagaaa 54521
>emb|AJ000263.1|HSJ000263 Homo sapiens hHb6 gene for type II hair-specific keratin Length = 7505 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 579 gcgtgaagcaggaggagaag 598
>gb|AC157561.10| Mus musculus chromosome 7, clone RP23-356A20, complete sequence Length = 232927 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 actgaggcacagaaaggcat 584 |||||||||||||||||||| Sbjct: 50105 actgaggcacagaaaggcat 50086
>dbj|AP007165.1| Aspergillus oryzae RIB40 genomic DNA, SC124 Length = 249334 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tggcgggggacggggaggag 205 |||||||||||||||||||| Sbjct: 109239 tggcgggggacggggaggag 109220
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 agcaggaggagaagaagctc 292 |||||||||||||||||||| Sbjct: 3964080 agcaggaggagaagaagctc 3964061
>ref|NM_002284.2| Homo sapiens keratin, hair, basic, 6 (monilethrix) (KRTHB6), mRNA Length = 2108 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 354 gcgtgaagcaggaggagaag 373
>ref|XM_941307.1| PREDICTED: Homo sapiens similar to keratin, hair, basic, 3 (LOC652010), mRNA Length = 1089 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 317 gcgtgaagcaggaggagaag 336
>gb|AC008634.5| Homo sapiens chromosome 5 clone CTB-174K14, complete sequence Length = 97811 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 gatactgaggcacagaaagg 581 |||||||||||||||||||| Sbjct: 76541 gatactgaggcacagaaagg 76522
>gb|AC096975.5| Rattus norvegicus 2 BAC CH230-203P11 (Children's Hospital Oakland Research Institute) complete sequence Length = 213875 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 669 tggtgttgattgtgttctta 688 |||||||||||||||||||| Sbjct: 58972 tggtgttgattgtgttctta 58991
>gb|AC158360.4| Mus musculus BAC clone RP23-220E13 from chromosome 8, complete sequence Length = 202395 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 550 cttgggagtggagatactgaggca 573 |||| ||||||||||||||||||| Sbjct: 130109 cttgtgagtggagatactgaggca 130086
>gb|AC005759.1|AC005759 Homo sapiens chromosome 19, cosmid R26927, complete sequence Length = 34688 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 564 tactgaggcacagaaaggca 583 |||||||||||||||||||| Sbjct: 18380 tactgaggcacagaaaggca 18399
>gb|AC106796.3| Homo sapiens chromosome 16 clone RP11-429K17, complete sequence Length = 168892 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 tggagatactgaggcacagaaagg 581 |||||| ||||||||||||||||| Sbjct: 150116 tggagaaactgaggcacagaaagg 150093
>gb|AC078865.22| Homo sapiens 12 BAC RP3-416H24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 69230 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 46088 gcgtgaagcaggaggagaag 46107
>gb|AC121757.8| Homo sapiens 12 BAC RP11-259K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 65725 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 54763 gcgtgaagcaggaggagaag 54782 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 43709 gcgtgaagcaggaggagaag 43690 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 24908 gcgtgaagcaggaggagaag 24927
>gb|AC021066.37| Homo sapiens 12 BAC RP11-845M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158285 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 23965 gcgtgaagcaggaggagaag 23984
>ref|NM_030830.1| Rattus norvegicus leucine zipper protein 1 (Luzp1), mRNA Length = 10929 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 gaagcaggaggagaagaagc 290 |||||||||||||||||||| Sbjct: 7074 gaagcaggaggagaagaagc 7055
>ref|NM_002281.2| Homo sapiens keratin, hair, basic, 1 (KRTHB1), mRNA Length = 1925 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 352 gcgtgaagcaggaggagaag 371
>gb|AC135587.3| Homo sapiens 3 BAC RP11-309B5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 71577 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 647 tctgtgtcttatttgtaaaa 666 |||||||||||||||||||| Sbjct: 3299 tctgtgtcttatttgtaaaa 3318
>gb|AC009948.3| Homo sapiens BAC clone RP11-65L3 from 2, complete sequence Length = 172828 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 135802 agatactgaggcacagaaag 135783
>gb|AC023270.7| Homo sapiens BAC clone RP11-88L24 from 2, complete sequence Length = 122493 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 agtggagatactgaggcacagaaa 579 |||||||| ||||||||||||||| Sbjct: 24016 agtggagaaactgaggcacagaaa 23993
>gb|AC018552.6| Homo sapiens chromosome 16 clone RP11-405F3, complete sequence Length = 152156 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 117861 agatactgaggcacagaaag 117842
>gb|AF181259.1|AF181259 Rattus norvegicus putative transcription factor LUZP (Luzp) mRNA, complete cds Length = 10929 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 gaagcaggaggagaagaagc 290 |||||||||||||||||||| Sbjct: 7074 gaagcaggaggagaagaagc 7055
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ggacctcgccaccgccgggg 347 |||||||||||||||||||| Sbjct: 64304 ggacctcgccaccgccgggg 64285
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ggacctcgccaccgccgggg 347 |||||||||||||||||||| Sbjct: 127313 ggacctcgccaccgccgggg 127294
>ref|XM_311095.2| Anopheles gambiae str. PEST ENSANGP00000017372 (ENSANGG00000014883), partial mRNA Length = 1404 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 cgtgaagcaggaggagaagaagct 291 |||||||| ||||||||||||||| Sbjct: 684 cgtgaagctggaggagaagaagct 707
>gb|BC069546.1| Homo sapiens keratin, hair, basic, 3, mRNA (cDNA clone MGC:97124 IMAGE:7262357), complete cds Length = 1582 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 367 gcgtgaagcaggaggagaag 386
>gb|BC069585.1| Homo sapiens keratin, hair, basic, 6 (monilethrix), mRNA (cDNA clone MGC:97108 IMAGE:7262333), complete cds Length = 1558 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 351 gcgtgaagcaggaggagaag 370
>gb|AC152831.2| Ornithorhynchus anatinus chromosome UNK clone OABb-168A1, complete sequence Length = 139370 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgggggacggggaggagccg 208 |||||||||||||||||||| Sbjct: 60447 cgggggacggggaggagccg 60428
>emb|AL139020.5|CNS01DX2 Human chromosome 14 DNA sequence BAC R-164H13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166308 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 agtggagatactgaggcacagaaa 579 |||||||| ||||||||||||||| Sbjct: 112833 agtggagaaactgaggcacagaaa 112810
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 atggcgggggacggggaggagccg 208 ||||||||||||||||| |||||| Sbjct: 1045712 atggcgggggacggggacgagccg 1045689
>gb|AY609558.1| Sus scrofa clone Clu_17947.scr.msk.p1.Contig1, mRNA sequence Length = 2248 Score = 40.1 bits (20), Expect = 9.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 2 cccccgggctgaggaattcggacgaggc 29 |||||||||||||||| ||||||||||| Sbjct: 1 cccccgggctgaggaa-tcggacgaggc 27
>gb|AC004447.1|AC004447 Homo sapiens chromosome 19, overlapping cosmids R27918 and R33775, complete sequence Length = 73007 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 tggagatactgaggcacagaaagg 581 |||||| ||||||||||||||||| Sbjct: 36672 tggagaaactgaggcacagaaagg 36649
>emb|X92412.1|HSTITINX5 H.sapiens titin gene exon 5 Length = 19994 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 17777 agatactgaggcacagaaag 17796
>emb|X90568.1|HSTITIN2B H.sapiens mRNA for titin protein (clone hh1-hh54) Length = 81940 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 561 agatactgaggcacagaaag 580 |||||||||||||||||||| Sbjct: 79476 agatactgaggcacagaaag 79495
>emb|X15218.1|HSSKIR Human ski oncogene mRNA Length = 3511 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 1781 gcgtgaagcaggaggagaag 1800
>emb|Y19216.1|HSPSIHHBD Homo sapiens putative psihHbD pseudogene for hair keratin, exons 1 to 9 Length = 9721 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 1107 gcgtgaagcaggaggagaag 1126
>emb|Y19211.1|HSDNAHB6 Homo sapiens partial KRTHB6 gene for type II hair keratin 6, exon 1 and promoter Length = 1261 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 1053 gcgtgaagcaggaggagaag 1072
>emb|Y19206.1|HSDNAHB1 Homo sapiens partial KRTHB1 gene for type II hair keratin 1, exon 1 and promoter Length = 1241 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcgtgaagcaggaggagaag 286 |||||||||||||||||||| Sbjct: 901 gcgtgaagcaggaggagaag 920 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,673,818 Number of Sequences: 3902068 Number of extensions: 5673818 Number of successful extensions: 121425 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 120894 Number of HSP's gapped (non-prelim): 528 length of query: 701 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 678 effective length of database: 17,143,297,704 effective search space: 11623155843312 effective search space used: 11623155843312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)