ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal33n13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193489.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1017 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Plus Query: 352 gaggatgaccacgaccacgaccccgagatcgcggacattatgggggactacttcgacgat 411 |||||||| ||||||||||||| ||||||| ||||| |||||||| ||||||||||| Sbjct: 241 gaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgac 300 Query: 412 cccaagaaagcccagtcccgtatggaggagaggataaagaagaagcggcacaagatcgtg 471 ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cccaacaaagcccagtctcgcatggaggagaggataaagaagaagcggcacaagatcgtg 360 Query: 472 caggccaagaccggctcgcccaatcccatgaatgtcgttttcaacaagtttgatttctcc 531 ||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||| Sbjct: 361 caggccaagaccggctcacccaaccccatgaaggtcgtcttcaacaagtttgacttctcc 420 Query: 532 aattcatatatatggtttgagttccacaatgctctattgccaaaagatgt 581 ||||| || |||||||| |||||| || ||||| || ||||||||||||| Sbjct: 421 aattcgtacatatggttcgagttctaccatgctttactgccaaaagatgt 470
>dbj|AK068120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135L15, full insert sequence Length = 1611 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Plus Query: 352 gaggatgaccacgaccacgaccccgagatcgcggacattatgggggactacttcgacgat 411 |||||||| ||||||||||||| ||||||| ||||| |||||||| ||||||||||| Sbjct: 449 gaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgac 508 Query: 412 cccaagaaagcccagtcccgtatggaggagaggataaagaagaagcggcacaagatcgtg 471 ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 509 cccaacaaagcccagtctcgcatggaggagaggataaagaagaagcggcacaagatcgtg 568 Query: 472 caggccaagaccggctcgcccaatcccatgaatgtcgttttcaacaagtttgatttctcc 531 ||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||| Sbjct: 569 caggccaagaccggctcacccaaccccatgaaggtcgtcttcaacaagtttgacttctcc 628 Query: 532 aattcatatatatggtttgagttccacaatgctctattgccaaaagatgt 581 ||||| || |||||||| |||||| || ||||| || ||||||||||||| Sbjct: 629 aattcgtacatatggttcgagttctaccatgctttactgccaaaagatgt 678
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 143 bits (72), Expect = 7e-31 Identities = 84/88 (95%) Strand = Plus / Minus Query: 433 atggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcgccc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 21151126 atggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcaccc 21151067 Query: 493 aatcccatgaatgtcgttttcaacaagt 520 || |||||||| ||||| |||||||||| Sbjct: 21151066 aaccccatgaaggtcgtcttcaacaagt 21151039 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 352 gaggatgaccacgaccacgaccccgagatcgcggacattatgggggactacttcgacgat 411 |||||||| ||||||||||||| ||||||| ||||| |||||||| ||||||||||| Sbjct: 21151304 gaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgac 21151245 Query: 412 cccaagaaagcccagtc 428 ||||| ||||||||||| Sbjct: 21151244 cccaacaaagcccagtc 21151228 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 519 gtttgatttctccaattcatatatatggtttgagttccacaatgctctattgccaaaaga 578 |||||| ||||||||||| || |||||||| |||||| || ||||| || |||||||||| Sbjct: 21150902 gtttgacttctccaattcgtacatatggttcgagttctaccatgctttactgccaaaaga 21150843 Query: 579 tgt 581 ||| Sbjct: 21150842 tgt 21150840
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 143 bits (72), Expect = 7e-31 Identities = 84/88 (95%) Strand = Plus / Minus Query: 433 atggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcgccc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 118671 atggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcaccc 118612 Query: 493 aatcccatgaatgtcgttttcaacaagt 520 || |||||||| ||||| |||||||||| Sbjct: 118611 aaccccatgaaggtcgtcttcaacaagt 118584 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 352 gaggatgaccacgaccacgaccccgagatcgcggacattatgggggactacttcgacgat 411 |||||||| ||||||||||||| ||||||| ||||| |||||||| ||||||||||| Sbjct: 118849 gaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgac 118790 Query: 412 cccaagaaagcccagtc 428 ||||| ||||||||||| Sbjct: 118789 cccaacaaagcccagtc 118773 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 519 gtttgatttctccaattcatatatatggtttgagttccacaatgctctattgccaaaaga 578 |||||| ||||||||||| || |||||||| |||||| || ||||| || |||||||||| Sbjct: 118447 gtttgacttctccaattcgtacatatggttcgagttctaccatgctttactgccaaaaga 118388 Query: 579 tgt 581 ||| Sbjct: 118387 tgt 118385
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 143 bits (72), Expect = 7e-31 Identities = 84/88 (95%) Strand = Plus / Minus Query: 433 atggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcgccc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 48635 atggaggagaggataaagaagaagcggcacaagatcgtgcaggccaagaccggctcaccc 48576 Query: 493 aatcccatgaatgtcgttttcaacaagt 520 || |||||||| ||||| |||||||||| Sbjct: 48575 aaccccatgaaggtcgtcttcaacaagt 48548 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 352 gaggatgaccacgaccacgaccccgagatcgcggacattatgggggactacttcgacgat 411 |||||||| ||||||||||||| ||||||| ||||| |||||||| ||||||||||| Sbjct: 48813 gaggatgagtacgaccacgacccggagatcggcgacataatgggggagtacttcgacgac 48754 Query: 412 cccaagaaagcccagtc 428 ||||| ||||||||||| Sbjct: 48753 cccaacaaagcccagtc 48737 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 519 gtttgatttctccaattcatatatatggtttgagttccacaatgctctattgccaaaaga 578 |||||| ||||||||||| || |||||||| |||||| || ||||| || |||||||||| Sbjct: 48411 gtttgacttctccaattcgtacatatggttcgagttctaccatgctttactgccaaaaga 48352 Query: 579 tgt 581 ||| Sbjct: 48351 tgt 48349
>emb|AL732616.3| Mouse DNA sequence from clone RP23-466D3 on chromosome 2, complete sequence Length = 123372 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 280 gctacagaagaggaggagcaggag 303 |||||||||||||||||||||||| Sbjct: 81893 gctacagaagaggaggagcaggag 81916
>gb|AC135048.2| Homo sapiens chromosome 16 clone RP11-1072A3, complete sequence Length = 177719 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctc 240 |||||||||||||| |||||||||||| Sbjct: 19356 cctgggctcaggccatcctcccgcctc 19382
>gb|AC103846.2| Homo sapiens chromosome 8, clone RP11-645H17, complete sequence Length = 171133 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 281 ctacagaagaggaggagcaggag 303 ||||||||||||||||||||||| Sbjct: 46158 ctacagaagaggaggagcaggag 46180
>gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, complete sequence Length = 125133 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctc 240 |||||||||||||| |||||||||||| Sbjct: 12739 cctgggctcaggccatcctcccgcctc 12765
>gb|AC104393.6| Homo sapiens chromosome 8, clone CTD-3080F16, complete sequence Length = 188270 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 281 ctacagaagaggaggagcaggag 303 ||||||||||||||||||||||| Sbjct: 54035 ctacagaagaggaggagcaggag 54057
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 396 ggactacttcgacgatcccaaga 418 ||||||||||||||||||||||| Sbjct: 2194318 ggactacttcgacgatcccaaga 2194340
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctc 240 |||||||||||||| |||||||||||| Sbjct: 43253 cctgggctcaggccatcctcccgcctc 43227
>emb|BX648890.1|HSM809041 Homo sapiens mRNA; cDNA DKFZp686L03247 (from clone DKFZp686L03247) Length = 4595 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctc 240 |||||||||||||| |||||||||||| Sbjct: 2078 cctgggctcaggccatcctcccgcctc 2104
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 396 ggactacttcgacgatcccaaga 418 ||||||||||||||||||||||| Sbjct: 2194262 ggactacttcgacgatcccaaga 2194284
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 396 ggactacttcgacgatcccaaga 418 ||||||||||||||||||||||| Sbjct: 76542 ggactacttcgacgatcccaaga 76564
>gb|AC011252.5| Drosophila melanogaster clone BACR23H21, complete sequence Length = 157965 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 agaagaggaggagcaggagtgg 306 |||||||||||||||||||||| Sbjct: 119092 agaagaggaggagcaggagtgg 119113
>gb|AC009357.8| Drosophila melanogaster clone BACR18I07, complete sequence Length = 179374 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 agaagaggaggagcaggagtgg 306 |||||||||||||||||||||| Sbjct: 46124 agaagaggaggagcaggagtgg 46145
>emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on chromosome 13, complete sequence Length = 188616 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 gaagaggaggagcaggagtggaagga 311 |||||||||||| ||||||||||||| Sbjct: 136176 gaagaggaggaggaggagtggaagga 136151
>gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome 13, complete sequence Length = 211181 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 gaagaggaggagcaggagtggaagga 311 |||||||||||| ||||||||||||| Sbjct: 92283 gaagaggaggaggaggagtggaagga 92258
>tpg|BK002329.1| TPA: TPA_inf: Drosophila melanogaster HDC12018 (HDC12018) gene, complete cds Length = 2024 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 agaagaggaggagcaggagtgg 306 |||||||||||||||||||||| Sbjct: 1106 agaagaggaggagcaggagtgg 1127
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 gactacttcgacgatcccaaga 418 |||||||||||||||||||||| Sbjct: 2152600 gactacttcgacgatcccaaga 2152621
>dbj|AK121700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073F21, full insert sequence Length = 2324 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 gactacttcgacgatcccaaga 418 |||||||||||||||||||||| Sbjct: 1014 gactacttcgacgatcccaaga 1035
>dbj|AK105759.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D05, full insert sequence Length = 2027 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 gactacttcgacgatcccaaga 418 |||||||||||||||||||||| Sbjct: 731 gactacttcgacgatcccaaga 752
>gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 of 118 of the complete sequence Length = 305165 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 285 agaagaggaggagcaggagtgg 306 |||||||||||||||||||||| Sbjct: 188925 agaagaggaggagcaggagtgg 188946
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 gactacttcgacgatcccaaga 418 |||||||||||||||||||||| Sbjct: 2160381 gactacttcgacgatcccaaga 2160402
>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125593 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 397 gactacttcgacgatcccaaga 418 |||||||||||||||||||||| Sbjct: 49294 gactacttcgacgatcccaaga 49315
>gb|AC125415.9| Homo sapiens chromosome 17, clone CTD-2309P3, complete sequence Length = 95090 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 gaggggctcccgaggcggggg 342 ||||||||||||||||||||| Sbjct: 54184 gaggggctcccgaggcggggg 54164
>emb|AL611966.11| Human DNA sequence from clone RP11-89K2 on chromosome 1, complete sequence Length = 68019 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 ggagtggaaggaactccaggaggag 324 ||||||| ||||||||||||||||| Sbjct: 34044 ggagtggcaggaactccaggaggag 34020
>emb|AL138924.25| Human DNA sequence from clone RP11-39O22 on chromosome 10, complete sequence Length = 54023 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 agaagaggaggagcaggagtggaag 309 ||||||||||||| ||||||||||| Sbjct: 17225 agaagaggaggaggaggagtggaag 17201
>emb|AL023284.1|HS406A7 Human DNA sequence from clone RP3-406A7 on chromosome 6q23-24 Contains a pseudogene similar to Elongation Factor 1-Alpha (EF-1-ALPHA, Statin S1), a ribosomal protein, large, P1 (RPLP1) pseudogene, a novel pseudogene, a NADH dehydrogenase (ubiquinone) Fe-S protein 5 (15kD) (NADH-coenzyme Q reductase) (NDUFS5) pseudogene, the 3' end of the MAP7 gene for microtubule-associated protein 7 (EMAP115, E-MAP-115) and a CpG island, complete sequence Length = 167691 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 tccctgggctcaggccctcctcccgcctc 240 ||||||||||||||| |||||||||||| Sbjct: 39185 tccctgggctcaggcgatcctcccgcctc 39213
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 tcctcggcggctacctcaccg 154 ||||||||||||||||||||| Sbjct: 173058 tcctcggcggctacctcaccg 173078
>dbj|AK021731.1| Homo sapiens cDNA FLJ11669 fis, clone HEMBA1004711 Length = 1780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 gaggggctcccgaggcggggg 342 ||||||||||||||||||||| Sbjct: 855 gaggggctcccgaggcggggg 875
>gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, region 59F5-59F8, BAC clone BACR02E09, complete sequence Length = 175118 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 gataaagaagaagcggcacaa 464 ||||||||||||||||||||| Sbjct: 41432 gataaagaagaagcggcacaa 41412
>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone BACR48M01, complete sequence Length = 188272 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 gataaagaagaagcggcacaa 464 ||||||||||||||||||||| Sbjct: 185490 gataaagaagaagcggcacaa 185470
>gb|AC112710.4| Homo sapiens BAC clone RP13-620L6 from 4, complete sequence Length = 74521 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 213 ccctgggctcaggccctcctcccgcctcg 241 ||||||||||| |||||||||| |||||| Sbjct: 15436 ccctgggctcacgccctcctcctgcctcg 15464
>gb|AC023632.19| Homo sapiens chromosome 8, clone RP11-267M23, complete sequence Length = 183859 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 215 ctgggctcaggccctcctcccgcct 239 ||||||||||||| ||||||||||| Sbjct: 153195 ctgggctcaggccgtcctcccgcct 153219
>emb|Z49572.1|SCYJR072C S.cerevisiae chromosome X reading frame ORF YJR072c Length = 1541 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 tcccatgaatgtcgttttcaacaag 519 |||||||| |||||||||||||||| Sbjct: 854 tcccatgattgtcgttttcaacaag 830
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 gataaagaagaagcggcacaa 464 ||||||||||||||||||||| Sbjct: 219030 gataaagaagaagcggcacaa 219010
>dbj|AP002379.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-463F4, complete sequence Length = 215986 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 287 aagaggaggagcaggagtggaagga 311 ||||||||||| ||||||||||||| Sbjct: 107037 aagaggaggagaaggagtggaagga 107013
>gb|AC005562.1|AC005562 Homo sapiens chromosome 17, clone hRPK.271_K_11, complete sequence Length = 199182 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 gaggggctcccgaggcggggg 342 ||||||||||||||||||||| Sbjct: 187538 gaggggctcccgaggcggggg 187558
>dbj|AP003730.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-379J13, complete sequences Length = 226171 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 287 aagaggaggagcaggagtggaagga 311 ||||||||||| ||||||||||||| Sbjct: 190156 aagaggaggagaaggagtggaagga 190132
>gb|DQ331214.1| Synthetic construct Saccharomyces cerevisiae clone FLH201796.01X NPA3 gene, complete sequence Length = 1158 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 495 tcccatgaatgtcgttttcaacaag 519 |||||||| |||||||||||||||| Sbjct: 498 tcccatgattgtcgttttcaacaag 522
>gb|L47993.1|YSCORFSAA Saccharomyces cerevisiae ORF genes, complete cds Length = 61989 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 tcccatgaatgtcgttttcaacaag 519 |||||||| |||||||||||||||| Sbjct: 35879 tcccatgattgtcgttttcaacaag 35855
>dbj|AP004218.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1198A1 Length = 195623 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 215 ctgggctcaggccctcctcccgcct 239 ||||||||||||| ||||||||||| Sbjct: 110647 ctgggctcaggccgtcctcccgcct 110671
>gb|AC152753.1| Mus musculus chromosome 17 clone RP23-65L9, complete sequence Length = 211853 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 atggaggagaggataaagaa 452 |||||||||||||||||||| Sbjct: 138903 atggaggagaggataaagaa 138922
>ref|XM_638861.1| Dictyostelium discoideum hypothetical protein (DDB0217489), partial mRNA Length = 2817 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 ttgatttctccaattcatat 540 |||||||||||||||||||| Sbjct: 2049 ttgatttctccaattcatat 2030
>ref|XM_479381.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2952 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cctcctcggcggctacctcaccgt 155 ||||||||||||||||| |||||| Sbjct: 231 cctcctcggcggctaccccaccgt 254
>ref|XM_479349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2508 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cctcctcggcggctacctcaccgt 155 ||||||||||||||||| |||||| Sbjct: 201 cctcctcggcggctaccccaccgt 224
>ref|XM_479347.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2493 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cctcctcggcggctacctcaccgt 155 ||||||||||||||||| |||||| Sbjct: 177 cctcctcggcggctaccccaccgt 200
>ref|NM_153809.1| Homo sapiens TAF1-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa (TAF1L), mRNA Length = 6221 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaact 314 ||||||||||||| |||||||||| Sbjct: 3515 ggaggagcaggagcggaaggaact 3538
>gb|AC114651.11| Mus musculus chromosome 1, clone RP24-153E5, complete sequence Length = 176384 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 cagaagaggaggagcaggag 303 |||||||||||||||||||| Sbjct: 80877 cagaagaggaggagcaggag 80896
>ref|NM_010929.1| Mus musculus Notch gene homolog 4 (Drosophila) (Notch4), mRNA Length = 6532 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cctcagcaccaccagcaggg 84 |||||||||||||||||||| Sbjct: 4016 cctcagcaccaccagcaggg 3997
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cctcagcaccaccagcaggg 84 |||||||||||||||||||| Sbjct: 59874 cctcagcaccaccagcaggg 59855
>ref|XM_322775.1| Neurospora crassa OR74A hypothetical protein (NCU03518.1) partial mRNA Length = 1638 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 accggctcgcccaatcccat 500 |||||||||||||||||||| Sbjct: 610 accggctcgcccaatcccat 629
>ref|XM_950781.1| Neurospora crassa OR74A hypothetical protein (NCU03518.1) partial mRNA Length = 1638 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 accggctcgcccaatcccat 500 |||||||||||||||||||| Sbjct: 610 accggctcgcccaatcccat 629
>gb|AC164581.7| Mus musculus 10 BAC RP23-45O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199422 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 ggctacagaagaggaggagcagga 302 ||||||||||||||||||| |||| Sbjct: 83023 ggctacagaagaggaggaggagga 83000
>ref|XM_984606.1| PREDICTED: Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 5 (Taf1), mRNA Length = 5311 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 797 ggaggagcaggaacggaaggaactccag 824
>ref|XM_984674.1| PREDICTED: Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 7 (Taf1), mRNA Length = 7273 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 2759 ggaggagcaggaacggaaggaactccag 2786
>ref|XM_984644.1| PREDICTED: Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 6 (Taf1), mRNA Length = 8060 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 3531 ggaggagcaggaacggaaggaactccag 3558
>ref|XM_984745.1| PREDICTED: Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 9 (Taf1), mRNA Length = 7964 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 3450 ggaggagcaggaacggaaggaactccag 3477
>ref|XM_984710.1| PREDICTED: Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 8 (Taf1), mRNA Length = 8003 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 3489 ggaggagcaggaacggaaggaactccag 3516
>ref|XM_896918.2| PREDICTED: Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 7 (Taf1), mRNA Length = 5311 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 797 ggaggagcaggaacggaaggaactccag 824
>ref|XM_001000569.1| PREDICTED: Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 8 (Taf1), mRNA Length = 8060 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 3531 ggaggagcaggaacggaaggaactccag 3558
>ref|XM_886564.2| PREDICTED: Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 2 (Taf1), mRNA Length = 7964 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 3450 ggaggagcaggaacggaaggaactccag 3477
>ref|XM_194622.6| PREDICTED: Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 1 (Taf1), mRNA Length = 8003 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 3489 ggaggagcaggaacggaaggaactccag 3516
>ref|XM_920064.2| PREDICTED: Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 13 (Taf1), mRNA Length = 8006 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 3490 ggaggagcaggaacggaaggaactccag 3517
>gb|AC021016.5| Homo sapiens BAC clone RP11-378A13 from 2, complete sequence Length = 191755 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgc 237 |||||||||||||| ||||||||| Sbjct: 153592 cctgggctcaggccatcctcccgc 153615
>gb|AC092123.4| Homo sapiens chromosome 16 clone RP11-104N10, complete sequence Length = 112519 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 gggctcaggccctcctcccgcctc 240 ||||||||||| |||||||||||| Sbjct: 18688 gggctcaggccatcctcccgcctc 18711
>emb|CT009767.6| Mouse DNA sequence from clone RP23-24A13 on chromosome 17, complete sequence Length = 221442 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cctcagcaccaccagcaggg 84 |||||||||||||||||||| Sbjct: 140933 cctcagcaccaccagcaggg 140914
>emb|CR937052.2| Rattus norvegicus chromosome 1 BAC CH230-445C15, complete sequence Length = 151854 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cagaagaggaggagcaggag 303 |||||||||||||||||||| Sbjct: 73515 cagaagaggaggagcaggag 73496
>gb|AC132148.3| Mus musculus BAC clone RP23-6N21 from chromosome 19, complete sequence Length = 191402 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 gaagaggaggagcaggagtggaag 309 |||||||||||| ||||||||||| Sbjct: 92477 gaagaggaggaggaggagtggaag 92500
>gb|AC124748.5| Mus musculus BAC clone RP23-261I7 from chromosome 17, complete sequence Length = 184968 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 atggaggagaggataaagaa 452 |||||||||||||||||||| Sbjct: 57275 atggaggagaggataaagaa 57294
>gb|AC007298.17| Homo sapiens 12q22 BAC RPCI11-256L6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 201572 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ccaccagcagggtatcagca 92 |||||||||||||||||||| Sbjct: 104171 ccaccagcagggtatcagca 104190
>gb|AF390568.1| Macaca fascicularis TBP-associated factor RNA polymerase 1-like (TAF1L) gene, partial cds Length = 2772 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaact 314 ||||||||||||| |||||||||| Sbjct: 1934 ggaggagcaggagcggaaggaact 1957
>gb|AF390567.1| Papio cynocephalus TBP-associated factor RNA polymerase 1-like (TAF1L) gene, partial cds Length = 2772 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaact 314 ||||||||||||| |||||||||| Sbjct: 1934 ggaggagcaggagcggaaggaact 1957
>gb|AF390565.1| Pongo pygmaeus TBP-associated factor RNA polymerase 1-like (TAF1L) gene, partial cds Length = 2795 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaact 314 ||||||||||||| |||||||||| Sbjct: 1958 ggaggagcaggagcggaaggaact 1981
>gb|AF390564.1| Gorilla gorilla TBP-associated factor RNA polymerase 1-like (TAF1L) gene, partial cds Length = 2563 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaact 314 ||||||||||||| |||||||||| Sbjct: 1747 ggaggagcaggagcggaaggaact 1770
>gb|AF390563.1| Pan troglodytes TBP-associated factor RNA polymerase 1-like (TAF1L) gene, partial cds Length = 2563 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaact 314 ||||||||||||| |||||||||| Sbjct: 1746 ggaggagcaggagcggaaggaact 1769
>gb|AF390562.1| Homo sapiens TBP-associated factor RNA polymerase 1-like (TAF1L) mRNA, complete cds Length = 6221 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaact 314 ||||||||||||| |||||||||| Sbjct: 3515 ggaggagcaggagcggaaggaact 3538
>gb|AC093709.2| Pan troglodytes clone RP43-180A19, complete sequence Length = 195646 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||||||||||| ||||| Sbjct: 165863 cctgggctcaagccctcctcccacctcg 165890
>gb|AC016898.6| Homo sapiens BAC clone RP11-68D19 from 7, complete sequence Length = 81117 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 23185 cctgggctcaagccatcctcccgcctcg 23212
>emb|AL163284.2|HS21C084 Homo sapiens chromosome 21 segment HS21C084 Length = 340000 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 accaccagcagggtatcagcagcc 95 |||||||||||||| ||||||||| Sbjct: 317849 accaccagcagggtgtcagcagcc 317872
>gb|AC138364.8| Mus musculus chromosome 7, clone RP23-243D10, complete sequence Length = 199717 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 acagaagaggaggagcagga 302 |||||||||||||||||||| Sbjct: 83945 acagaagaggaggagcagga 83964
>gb|BC030279.1| Homo sapiens chromosome 1 open reading frame 211, mRNA (cDNA clone MGC:40168 IMAGE:5141008), complete cds Length = 1288 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||||||| |||||| |||||| Sbjct: 340 cctgggctcaggccatcctcctgcctcg 367
>emb|AL772287.2| Human DNA sequence from clone RP11-357L5 on chromosome 10 Contains part of the CDH23 gene for cadherin related 23, complete sequence Length = 42811 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 21894 cctgggctcaagccatcctcccgcctcg 21867
>emb|AL589642.6| Human DNA sequence from clone RP11-555J4 on chromosome 9 Contains a TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa (TAF1) (CCG1, P250) pseudogene, two novel genes and a heterogeneous nuclear ribonucleoprotein C (C1/C2) (HNRPC) pseudogene, complete sequence Length = 92982 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ggaggagcaggagtggaaggaact 314 ||||||||||||| |||||||||| Sbjct: 16529 ggaggagcaggagcggaaggaact 16506
>emb|AL450489.12| Human DNA sequence from clone RP11-203B9 on chromosome 6 Contains the 3 'end of gene FLJ30162, a novel gene, the 5'end of gene KIAA0576, the 3' end of a novel gene and a CpG island, complete sequence Length = 101666 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||| ||||||| ||||||||||||| Sbjct: 6220 cctgggttcaggccgtcctcccgcctcg 6247
>emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chromosome 6 Contains a novel pseudogene, complete sequence Length = 163869 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 gaggaggagcaggagtggaaggaa 312 ||||| |||||||||||||||||| Sbjct: 148778 gaggaagagcaggagtggaaggaa 148801
>emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on chromosome 13 Contains the gene for a novel protein (FLJ31208), three novel genes, a novel pseudogene and three CpG islands, complete sequence Length = 178850 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 ||||||||||||| ||||||||||||| Sbjct: 87024 cctgggctcaggcagtcctcccgcctcg 86997
>gb|AC083928.11| Homo sapiens chromosome 8, clone RP11-77C4, complete sequence Length = 144023 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ccctgggctcaggccctcctcccgcctc 240 ||||||||||| ||| |||||||||||| Sbjct: 120425 ccctgggctcaagccatcctcccgcctc 120398
>ref|NM_153709.1| Homo sapiens chromosome 1 open reading frame 211 (C1orf211), mRNA Length = 1288 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||||||| |||||| |||||| Sbjct: 340 cctgggctcaggccatcctcctgcctcg 367
>emb|AL139082.18| Human DNA sequence from clone RP11-248G5 on chromosome 13q14.3-21.1 Contains the 5' end of the ATP7B gene for ATPase, Cu++ transporting, beta polypeptide (Wilson disease), four novel genes, the NEK3 gene for NIMA (never in mitosis gene a)-related kinase 3, the 3' end of a novel gene and five CpG islands, complete sequence Length = 187691 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gaggaggagcaggagtggaaggaa 312 |||||||||||| ||||||||||| Sbjct: 69798 gaggaggagcagaagtggaaggaa 69775
>gb|AC117436.6| Homo sapiens 3 BAC RP11-69K16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 133636 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ccctgggctcaggccctcctcccgcctc 240 ||||||||||| ||| |||||||||||| Sbjct: 32112 ccctgggctcaagccatcctcccgcctc 32085
>emb|AL117379.14|HSJ563E14 Human DNA sequence from clone RP4-563E14 on chromosome 20 Contains the 5' of the DATF1 gene encoding the death associated transcription factor 1 (DIO1, FLJ11265, KIAA0333), the 5' end of a novel geneand four CpG islands, complete sequence Length = 28519 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 25241 cctgggctcaagccatcctcccgcctcg 25214
>emb|AL109915.10|HSDJ120N9 Human DNA sequence from clone RP1-120N9 on chromosome 6q13-15 Contains the SNAP91 gene for synaptosomal-associated protein, 91 kD homolog (mouse) (KIAA0656) and a CpG island, complete sequence Length = 167018 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 ggaggagcaggagtggaagg 310 |||||||||||||||||||| Sbjct: 136100 ggaggagcaggagtggaagg 136081
>emb|AL031847.17|HS120G22 Human DNA sequence from clone RP1-120G22 on chromosome 1p36.21-36.33 Contains the 5' end of the CHD5 gene for chromodomain helicase DNA binding protein 5, the RPL22 gene for ribosomal protein L22, eight novel genes, the ICMT gene for isoprenylcysteine carboxyl methyltransferase, possible ortholog of rodent transcription factor HES-3, the 3' end of the gene for brain acyl-CoA hydrolase (BACH) and seven CpG islands, complete sequence Length = 166518 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||||||| |||||| |||||| Sbjct: 71352 cctgggctcaggccatcctcctgcctcg 71325
>emb|AL021391.2|HS102D24 Human DNA sequence from clone RP1-102D24 on chromosome 22, complete sequence Length = 138129 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ccctgggctcaggccctcctcccgcctc 240 ||||||||||||||| |||||| ||||| Sbjct: 64825 ccctgggctcaggccatcctcctgcctc 64798
>emb|AL008719.1|HS342B11 Human DNA sequence from clone CTA-342B11 on chromosome 22q12.1-12.3 Contains a novel gene and a CpG island, complete sequence Length = 56458 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 10419 cctgggctcaagccatcctcccgcctcg 10446
>gb|AC010538.9| Homo sapiens chromosome 16 clone RP11-368I7, complete sequence Length = 210031 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 gggctcaggccctcctcccgcctc 240 ||||||||||| |||||||||||| Sbjct: 174621 gggctcaggccatcctcccgcctc 174644
>gb|AY218841.1| Danio rerio clone BUSM1-81J4 brahma protein-like protein 1 (brg1) and low density lipoprotein receptor (ldlr) genes, complete cds Length = 82729 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tttctccaattcatatatat 544 |||||||||||||||||||| Sbjct: 9426 tttctccaattcatatatat 9445
>emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid contig 29E8 Length = 197698 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 cagaagaggaggagcaggag 303 |||||||||||||||||||| Sbjct: 29499 cagaagaggaggagcaggag 29480
>emb|AL442043.1|NCB11E6 Neurospora crassa DNA linkage group II BAC clone B11E6 Length = 69943 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 accggctcgcccaatcccat 500 |||||||||||||||||||| Sbjct: 42776 accggctcgcccaatcccat 42795
>emb|AL954239.1| Pan troglodytes chromosome 22 clone PTB-028I09 map 22q22.2-q22.3, complete sequence Length = 141737 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 accaccagcagggtatcagcagcc 95 |||||||||||||| ||||||||| Sbjct: 1509 accaccagcagggtgtcagcagcc 1532
>emb|AL954238.1| Pan troglodytes chromosome 22 clone RP43-006A20 map 22q22.2-q22.3, complete sequence Length = 165383 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 accaccagcagggtatcagcagcc 95 |||||||||||||| ||||||||| Sbjct: 117440 accaccagcagggtgtcagcagcc 117463
>emb|AL691432.53| Human DNA sequence from clone RP11-345P4 on chromosome 1, complete sequence Length = 186482 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 aagaggaggagcaggagtgg 306 |||||||||||||||||||| Sbjct: 38822 aagaggaggagcaggagtgg 38841
>gb|AC154634.2| Mus musculus BAC clone RP23-298D14 from chromosome 14, complete sequence Length = 218356 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tttctccaattcatatatat 544 |||||||||||||||||||| Sbjct: 127211 tttctccaattcatatatat 127230
>gb|AC009879.8| Homo sapiens, clone RP11-346I3, complete sequence Length = 191352 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ccctgggctcaggccctcctcccgcctc 240 ||||||||||| ||| |||||||||||| Sbjct: 19991 ccctgggctcaagccatcctcccgcctc 19964
>gb|AC116913.6| Homo sapiens chromosome 15, clone CTD-3185P2, complete sequence Length = 152561 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 146487 cctgggctcaagccatcctcccgcctcg 146514
>gb|BC051073.1| Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA (cDNA clone IMAGE:5397269) Length = 1644 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 1239 ggaggagcaggaacggaaggaactccag 1266
>gb|BC047418.1| Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA (cDNA clone IMAGE:4018491), partial cds Length = 4413 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 1626 ggaggagcaggaacggaaggaactccag 1653
>gb|AC010271.8| Homo sapiens chromosome 19 clone CTC-492K19, complete sequence Length = 160643 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||||||| |||||| |||||| Sbjct: 30899 cctgggctcaggccatcctcctgcctcg 30872
>gb|AC010247.9| Homo sapiens chromosome 19 clone CTC-378H22, complete sequence Length = 95663 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgc 237 |||||||||||||| ||||||||| Sbjct: 884 cctgggctcaggccatcctcccgc 907
>gb|AC016826.9| Homo sapiens chromosome 10 clone RP11-570J13, complete sequence Length = 130541 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 86072 cctgggctcaagccatcctcccgcctcg 86045
>gb|AC013564.7| Homo sapiens chromosome 15, clone RP11-321F6, complete sequence Length = 210133 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 183624 cctgggctcaagccatcctcccgcctcg 183597
>gb|AC093502.2| Drosophila melanogaster 3L BAC RP98-48C4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166249 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 caatctcctcagcaccaccagcag 82 ||||| |||||||||||||||||| Sbjct: 40889 caatcccctcagcaccaccagcag 40912
>gb|AC010057.7| Drosophila melanogaster 3L BAC RP98-26C18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 192588 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aaagaagaagcggcacaaga 466 |||||||||||||||||||| Sbjct: 51148 aaagaagaagcggcacaaga 51167
>dbj|AK123788.1| Homo sapiens cDNA FLJ41794 fis, clone NESOP2002487 Length = 1980 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 671 cctgggctcaagccatcctcccgcctcg 644
>gb|AC104703.3| Drosophila melanogaster 3L BAC RP98-35M1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185404 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 caatctcctcagcaccaccagcag 82 ||||| |||||||||||||||||| Sbjct: 89344 caatcccctcagcaccaccagcag 89367
>dbj|AK123400.1| Homo sapiens cDNA FLJ41406 fis, clone BRHIP2000691 Length = 2821 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 aagaggaggagcaggagtgg 306 |||||||||||||||||||| Sbjct: 1603 aagaggaggagcaggagtgg 1622
>dbj|AK097863.1| Homo sapiens cDNA FLJ40544 fis, clone THYMU2000879 Length = 2646 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 ||||||||||||| ||||||||||||| Sbjct: 1798 cctgggctcaggcaatcctcccgcctcg 1825
>gb|AC145334.12| Pan troglodytes clone rp43-24d7, complete sequence Length = 139632 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 107984 cctgggctcaagccatcctcccgcctcg 107957
>gb|AC004491.2| Homo sapiens BAC clone CTB-139P11 from 7q11-q21, complete sequence Length = 175839 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||||||||||| ||||| Sbjct: 2293 cctgggctcaagccctcctcccacctcg 2266
>emb|BX322663.8| Zebrafish DNA sequence from clone CH211-224D23 in linkage group 3, complete sequence Length = 145520 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tttctccaattcatatatat 544 |||||||||||||||||||| Sbjct: 35016 tttctccaattcatatatat 35035
>gb|AC118344.2| Homo sapiens chromosome 19 clone CTC-425O23, complete sequence Length = 178335 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||||||| |||||| |||||| Sbjct: 32917 cctgggctcaggccatcctcctgcctcg 32944
>ref|NM_168571.2| Drosophila melanogaster CG32133-RA (CG32133), mRNA Length = 6885 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 caatctcctcagcaccaccagcag 82 ||||| |||||||||||||||||| Sbjct: 1414 caatcccctcagcaccaccagcag 1437
>gb|AC098862.3| Homo sapiens BAC clone RP11-339D20 from 4, complete sequence Length = 122969 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 gaggagaggataaagaagaa 455 |||||||||||||||||||| Sbjct: 76374 gaggagaggataaagaagaa 76355
>dbj|AK143484.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched library, clone:E860013D10 product:Notch gene homolog 4 (Drosophila), full insert sequence Length = 3724 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cctcagcaccaccagcaggg 84 |||||||||||||||||||| Sbjct: 1216 cctcagcaccaccagcaggg 1197
>emb|BX571765.6| Zebrafish DNA sequence from clone DKEYP-77G7 in linkage group 23, complete sequence Length = 147933 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 aagaggaggagcaggagtggaagg 310 ||||||||||| |||||||||||| Sbjct: 86570 aagaggaggagaaggagtggaagg 86547
>gb|AC111120.12| Mus musculus chromosome 7, clone RP23-225M4, complete sequence Length = 151727 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gaggaggagcaggagtggaaggaa 312 ||||||||||||||| |||||||| Sbjct: 33807 gaggaggagcaggaggggaaggaa 33784
>gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold Length = 583711 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 20676 cctgggctcaagccatcctcccgcctcg 20703
>gb|AC091219.2| Drosophila melanogaster 3L BAC RP98-4C3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168047 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aaagaagaagcggcacaaga 466 |||||||||||||||||||| Sbjct: 90498 aaagaagaagcggcacaaga 90517
>dbj|AK046668.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430306D02 product:TAFII250, full insert sequence Length = 3046 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 2 ggaggagcaggaacggaaggaactccag 29
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cggctacctcaccgtctccg 160 |||||||||||||||||||| Sbjct: 3390122 cggctacctcaccgtctccg 3390141
>dbj|AK050691.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030004I16 product:similar to TAFII250 TRANSCRIPTION FACTOR (FRAGMENT) [Mus musculus], full insert sequence Length = 1170 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 884 ggaggagcaggaacggaaggaactccag 911
>gb|AF034680.1|AF034680 Tarsius syrichta clone TARS45 tarsier Alu Length = 236 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ccctgggctcaggccctcctcccgcctc 240 |||||||||||||| ||||||| ||||| Sbjct: 57 ccctgggctcaggcactcctcctgcctc 30
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cctcctcggcggctacctcaccgt 155 ||||||||||||||||| |||||| Sbjct: 27448487 cctcctcggcggctaccccaccgt 27448510 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cctcctcggcggctacctcaccgt 155 ||||||||||||||||| |||||| Sbjct: 27096886 cctcctcggcggctaccccaccgt 27096909 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cctcctcggcggctacctcaccgt 155 ||||||||||||||||| |||||| Sbjct: 27079007 cctcctcggcggctaccccaccgt 27079030
>gb|DQ020217.1| Bambusa oldhamii sucrose transporter BoSUT1 mRNA, complete cds Length = 1620 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ccaccctcctcggcggctacctca 151 ||||||||||||||||| |||||| Sbjct: 1355 ccaccctcctcggcggcaacctca 1332
>gb|AC093873.2| Homo sapiens BAC clone RP11-615B17 from 2, complete sequence Length = 210320 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 153387 cctgggctcaagccatcctcccgcctcg 153360
>gb|AC114793.5| Homo sapiens BAC clone RP11-676J11 from 2, complete sequence Length = 12084 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 ccctgggctcaggccctcctcccgcctc 240 ||||||||||| ||| |||||||||||| Sbjct: 11695 ccctgggctcaagccatcctcccgcctc 11722
>gb|AC133108.3| Homo sapiens BAC clone RP11-673D13 from 2, complete sequence Length = 31815 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 ccctgggctcaggccctcctcccgcctc 240 ||||||||||| ||| |||||||||||| Sbjct: 1611 ccctgggctcaagccatcctcccgcctc 1638
>gb|AC080166.6| Homo sapiens BAC clone RP11-813C7 from 2, complete sequence Length = 179961 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 41709 cctgggctcaagccatcctcccgcctcg 41682
>gb|AC155822.2| Mus musculus BAC clone RP23-319J10 from chromosome 16, complete sequence Length = 192526 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 aggagaggataaagaagaag 456 |||||||||||||||||||| Sbjct: 135152 aggagaggataaagaagaag 135133
>gb|AC069144.9|AC069144 Arabidopsis thaliana chromosome 1 BAC F14C21 genomic sequence, complete sequence Length = 102135 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tttctccaattcatatatat 544 |||||||||||||||||||| Sbjct: 53301 tttctccaattcatatatat 53320
>gb|AC004755.2|AC004755 Homo sapiens chromosome 19, fosmid FOS37502 (LLfos-27A6) and 3' overlapping PCR product, complete sequence Length = 41159 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 tgggctcaggccctcctccc 235 |||||||||||||||||||| Sbjct: 35758 tgggctcaggccctcctccc 35777
>gb|AC062029.7| Homo sapiens BAC clone RP11-450E9 from 2, complete sequence Length = 129832 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 51454 cctgggctcaagccatcctcccgcctcg 51481
>gb|AC004674.1| Homo sapiens X BAC GSHB-600G8 (Genome Systems Human BAC library) complete sequence Length = 158886 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 ccctgggctcaggccctcctcccgcctc 240 |||||||||||||| |||||||||||| Sbjct: 102309 ccctgggctcaggctttcctcccgcctc 102336
>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence Length = 333321 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ttgatttctccaattcatat 540 |||||||||||||||||||| Sbjct: 128670 ttgatttctccaattcatat 128689
>gb|AF229163.1|AF229163 Homo sapiens natural resistance-associated macrophage protein 1 (SLC11A1) gene, complete cds, alternatively spliced; and nuclear LIM interactor-interacting factor (NLI-IF) gene, complete cds Length = 32198 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgc 237 |||||||||||||| ||||||||| Sbjct: 31580 cctgggctcaggccatcctcccgc 31603
>gb|AC026412.4| Homo sapiens chromosome 5 clone CTD-2012J19, complete sequence Length = 128694 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 gggctcaggccctcctcccgcctc 240 ||||||||||| |||||||||||| Sbjct: 37402 gggctcaggccatcctcccgcctc 37379
>gb|AC124248.6| Homo sapiens chromosome 15, clone CTD-3094K11, complete sequence Length = 142201 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 ccctgggctcaggccctcctcccgcctc 240 ||||||||||| ||| |||||||||||| Sbjct: 98630 ccctgggctcaagccatcctcccgcctc 98657
>gb|AC130689.8| Homo sapiens chromosome 17, clone CTD-2548O19, complete sequence Length = 202269 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 ||||||||||||| ||||||||||||| Sbjct: 142889 cctgggctcaggcaatcctcccgcctcg 142862
>gb|AC064840.2|AC064840 Arabidopsis thaliana chromosome I BAC T24C10 genomic sequence, complete sequence Length = 77923 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tttctccaattcatatatat 544 |||||||||||||||||||| Sbjct: 41271 tttctccaattcatatatat 41252
>gb|AC040169.7| Homo sapiens chromosome 16 clone RP11-505K9, complete sequence Length = 212596 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 133544 cctgggctcaagccgtcctcccgcctcg 133517
>gb|AC024076.4|AC024076 Homo sapiens chromosome 19 clone LLNLF-112A4, complete sequence Length = 39443 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctcccgc 237 |||||||||||||| ||||||||| Sbjct: 25268 cctgggctcaggccatcctcccgc 25291
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cctcctcggcggctacctcaccgt 155 ||||||||||||||||| |||||| Sbjct: 12458 cctcctcggcggctaccccaccgt 12481
>dbj|AP006460.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003M19 Length = 171790 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cctcctcggcggctacctcaccgt 155 ||||||||||||||||| |||||| Sbjct: 154148 cctcctcggcggctaccccaccgt 154171
>emb|BX005043.8| Zebrafish DNA sequence from clone DKEY-3E19 in linkage group 14, complete sequence Length = 238499 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 aagaggaggagcaggagtggaagg 310 ||||||||||| |||||||||||| Sbjct: 40770 aagaggaggagaaggagtggaagg 40747
>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0427D10 Length = 154192 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cctcctcggcggctacctcaccgt 155 ||||||||||||||||| |||||| Sbjct: 100127 cctcctcggcggctaccccaccgt 100150 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 cctcctcggcggctacctcaccgt 155 ||||||||||||||||| |||||| Sbjct: 82248 cctcctcggcggctaccccaccgt 82271
>dbj|AK110273.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-C12, full insert sequence Length = 3926 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 cagaagaggaggagcaggag 303 |||||||||||||||||||| Sbjct: 2016 cagaagaggaggagcaggag 2035
>gb|AC004832.3|AC004832 Homo sapiens PAC clone RP4-539M6 from 22, complete sequence Length = 159593 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctc 233 |||||||||||||||||||| Sbjct: 47020 cctgggctcaggccctcctc 47039
>gb|AC110740.15| Mus musculus chromosome 8, clone RP24-421B13, complete sequence Length = 213782 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 atctcctcagcaccaccagcaggg 84 |||||||||||||||||| ||||| Sbjct: 186529 atctcctcagcaccaccatcaggg 186506
>dbj|AP002748.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-3074O7, complete sequence Length = 176017 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 216 tgggctcaggccctcctcccgcctcgtc 243 |||||||||||| ||||||| ||||||| Sbjct: 2058 tgggctcaggccgtcctcccacctcgtc 2031
>gb|AE003536.4| Drosophila melanogaster chromosome 3L, section 49 of 83 of the complete sequence Length = 350428 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 caatctcctcagcaccaccagcag 82 ||||| |||||||||||||||||| Sbjct: 287222 caatcccctcagcaccaccagcag 287199
>gb|AE003469.3| Drosophila melanogaster chromosome 3L, section 3 of 83 of the complete sequence Length = 286515 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aaagaagaagcggcacaaga 466 |||||||||||||||||||| Sbjct: 77177 aaagaagaagcggcacaaga 77196
>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence Length = 201986 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cctcagcaccaccagcaggg 84 |||||||||||||||||||| Sbjct: 59895 cctcagcaccaccagcaggg 59876
>dbj|AP001107.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-867G23, complete sequences Length = 196662 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 216 tgggctcaggccctcctcccgcctcgtc 243 |||||||||||| ||||||| ||||||| Sbjct: 169152 tgggctcaggccgtcctcccacctcgtc 169125
>dbj|D26114.1|HAMCCG1 Mesocricetus auratus mRNA for CCG1, complete cds Length = 5660 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||| |||||| |||||||||||||| Sbjct: 3372 ggaggaacaggagcggaaggaactccag 3399
>emb|BX284664.8| Zebrafish DNA sequence from clone DKEY-7I23 in linkage group 8, complete sequence Length = 228202 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 aagaggaggagcaggagtggaagg 310 ||||||||||| |||||||||||| Sbjct: 126315 aagaggaggagtaggagtggaagg 126292
>gb|AF022178.1|AF022178 Mus musculus TAFII250 transcription factor (CCG1) mRNA, partial cds Length = 1321 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 828 ggaggagcaggaacggaaggaactccag 855
>emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in linkage group 8, complete sequence Length = 181168 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 ggaggagcaggagtggaagg 310 |||||||||||||||||||| Sbjct: 88495 ggaggagcaggagtggaagg 88476
>gb|U43691.1|MMU43691 Mus musculus Notch4 mRNA, complete cds Length = 6677 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cctcagcaccaccagcaggg 84 |||||||||||||||||||| Sbjct: 4246 cctcagcaccaccagcaggg 4227
>gb|AC005585.1|AC005585 Homo sapiens chromosome 22, clone hRPC.130_H_16, complete sequence Length = 158257 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 cctgggctcaggccctcctc 233 |||||||||||||||||||| Sbjct: 155860 cctgggctcaggccctcctc 155879
>emb|AL773572.1|HS141D16 Homo sapiens chromosome 21 from PAC RP1-141D16 map 21q22.2,D21S349-MX1, complete sequence Length = 146073 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 accaccagcagggtatcagcagcc 95 |||||||||||||| ||||||||| Sbjct: 77912 accaccagcagggtgtcagcagcc 77935
>gb|AC158748.9| Mus musculus chromosome 7, clone RP23-239H14, complete sequence Length = 167144 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 gaggaggagcaggagtggaaggaa 312 ||||||||||||||| |||||||| Sbjct: 27085 gaggaggagcaggaggggaaggaa 27108
>gb|BC050000.1| Mus musculus cDNA clone IMAGE:6466318 Length = 1474 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gaggaggagcaggagtggaaggaa 312 ||||||||||||||| |||||||| Sbjct: 1149 gaggaggagcaggaggggaaggaa 1126
>gb|AC145931.4| Gallus gallus BAC clone CH261-32O1 from chromosome unknown, complete sequence Length = 202356 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 tttgagttccacaatgctct 566 |||||||||||||||||||| Sbjct: 8777 tttgagttccacaatgctct 8758
>gb|BC094568.1| Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA (cDNA clone IMAGE:6833930), complete cds Length = 4562 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 797 ggaggagcaggaacggaaggaactccag 824
>gb|M80456.1|MUSINT3MAM Mus musculus Int-3 mRNA, complete cds Length = 6532 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 cctcagcaccaccagcaggg 84 |||||||||||||||||||| Sbjct: 4016 cctcagcaccaccagcaggg 3997
>emb|AL831754.2| Mouse DNA sequence from clone RP23-295A1 on chromosome 4, complete sequence Length = 189029 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 tatggaggagaggataaaga 451 |||||||||||||||||||| Sbjct: 140174 tatggaggagaggataaaga 140193
>emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chromosome 11, complete sequence Length = 224034 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 285 agaagaggaggagcaggagtggaaggaa 312 |||||||||||||||||| ||| ||||| Sbjct: 158224 agaagaggaggagcaggaatgggaggaa 158197
>dbj|AB063041.1| Macaca fascicularis brain cDNA clone:QmoA-11852, full insert sequence Length = 1906 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 cctgggctcaggccctcctcccgcctcg 241 |||||||||| ||| ||||||||||||| Sbjct: 1608 cctgggctcaagccatcctcccgcctcg 1581
>emb|AL806534.3| Mouse DNA sequence from clone RP23-334A11 on chromosome X, complete sequence Length = 130689 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 ggaggagcaggagtggaaggaactccag 318 |||||||||||| |||||||||||||| Sbjct: 18097 ggaggagcaggaacggaaggaactccag 18124 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,213,487 Number of Sequences: 3902068 Number of extensions: 5213487 Number of successful extensions: 158560 Number of sequences better than 10.0: 182 Number of HSP's better than 10.0 without gapping: 182 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 157684 Number of HSP's gapped (non-prelim): 876 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
