Clone Information

BLAST Search Result

Clone Name	baal33n08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	emb\|AL590293.3\| Human DNA sequence from clone RP11-227B10 on chr...	46	0.14
2	gb\|AY029558.1\| Zea mays putative methyl-binding domain protein M...	44	0.55
3	gb\|BT018441.1\| Zea mays clone EL01N0372H11.d mRNA sequence	44	0.55
4	gb\|AY596528.1\| Saccharum officinarum clone SCAGLR1043D06, comple...	42	2.2
5	gb\|AC146111.3\| Pan troglodytes BAC clone RP43-38O16 from 7, comp...	42	2.2
6	emb\|X91855.1\|PKMSP1GEN P.knowlesi MSP-1 gene	42	2.2
7	ref\|XM_307789.2\| Anopheles gambiae str. PEST ENSANGP00000012955 ...	42	2.2
8	dbj\|AP003466.2\| Homo sapiens genomic DNA, chromosome 8q23, clone...	42	2.2
9	gb\|AC164294.2\| Mus musculus BAC clone RP24-556J13 from chromosom...	40	8.6
10	ref\|XM_475121.1\| Oryza sativa (japonica cultivar-group), predic...	40	8.6
11	gb\|AF224315.1\| Gallus gallus Frizzled-2 (cFz-2) mRNA, partial cds	40	8.6
12	gb\|AC095022.4\| Sus scrofa clone RP44-374C1, complete sequence	40	8.6
13	emb\|CR733881.2\|CNS0GT1K Tetraodon nigroviridis full-length cDNA	40	8.6
14	emb\|CR720476.2\|CNS0GIV6 Tetraodon nigroviridis full-length cDNA	40	8.6
15	emb\|CR717798.2\|CNS0GGSS Tetraodon nigroviridis full-length cDNA	40	8.6
16	emb\|CR716786.2\|CNS0GG0R Tetraodon nigroviridis full-length cDNA	40	8.6
17	emb\|CR706085.2\|CNS0G7RL Tetraodon nigroviridis full-length cDNA	40	8.6
18	emb\|CR706333.2\|CNS0G7YH Tetraodon nigroviridis full-length cDNA	40	8.6
19	emb\|CR702087.2\|CNS0G4OJ Tetraodon nigroviridis full-length cDNA	40	8.6
20	emb\|CR698551.2\|CNS0G1YB Tetraodon nigroviridis full-length cDNA	40	8.6
21	emb\|CR688935.2\|CNS0FUJ7 Tetraodon nigroviridis full-length cDNA	40	8.6
22	emb\|CR686526.2\|CNS0FSOA Tetraodon nigroviridis full-length cDNA	40	8.6
23	emb\|CR673871.2\|CNS0FIXH Tetraodon nigroviridis full-length cDNA	40	8.6
24	emb\|CR632767.2\|CNS0EN7P Tetraodon nigroviridis full-length cDNA	40	8.6
25	emb\|CR634094.2\|CNS0EO8K Tetraodon nigroviridis full-length cDNA	40	8.6
26	emb\|CR633412.2\|CNS0ENPM Tetraodon nigroviridis full-length cDNA	40	8.6
27	emb\|CR632968.2\|CNS0ENDA Tetraodon nigroviridis full-length cDNA	40	8.6
28	gb\|AC146568.11\| Medicago truncatula clone mth2-101o18, complete ...	40	8.6
29	gb\|AY883559.2\| Zea mays cultivar inbred line B73 teosinte glume ...	40	8.6
30	emb\|AJ277892.2\|HSA277892 Homo sapiens partial TTN gene for titin	40	8.6
31	gb\|BC070113.1\| Homo sapiens cDNA clone IMAGE:5268363	40	8.6
32	gb\|BC041357.1\| Homo sapiens cDNA clone IMAGE:5272988	40	8.6
33	gb\|AC137553.45\| Medicago truncatula clone mth2-20p12, complete s...	40	8.6
34	dbj\|AP007154.1\| Aspergillus oryzae RIB40 genomic DNA, SC001	40	8.6
35	dbj\|AK132167.1\| Mus musculus 17 days embryo head cDNA, RIKEN ful...	40	8.6
36	dbj\|AK146889.1\| Mus musculus 16 days embryo heart cDNA, RIKEN fu...	40	8.6
37	gb\|AF133268.1\|AF133268 Manduca sexta glutathione S-transferase G...	40	8.6
38	gb\|AC010680.10\| Homo sapiens BAC clone RP11-171I2 from 2, comple...	40	8.6
39	ref\|NM_001033208.1\| Mus musculus expressed sequence AA407270 (AA...	40	8.6
40	gb\|AC011286.7\| Homo sapiens BAC clone RP11-4H21 from 2, complete...	40	8.6
41	gb\|AC149887.2\| Xenopus tropicalis clone ISB-146F11, complete seq...	40	8.6
42	gb\|AC151340.2\| Xenopus tropicalis clone ISB-362A3, complete sequ...	40	8.6
43	emb\|AL929259.13\| Mouse DNA sequence from clone RP23-141E12 on ch...	40	8.6
44	emb\|CT010511.9\| Mouse DNA sequence from clone RP23-222I19 on chr...	40	8.6

>emb|AL590293.3| Human DNA sequence from clone RP11-227B10 on chromosome Xq21.33-22.3,
            complete sequence
          Length = 67911

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 75   aaatgatgtggagatgaaagttg 97
            |||||||||||||||||||||||
Sbjct: 9473 aaatgatgtggagatgaaagttg 9451

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>gb|AY029558.1| Zea mays putative methyl-binding domain protein MBD105 mRNA,
           complete cds
          Length = 1777

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 338 agaaggaagatgtcaagccagctgag 363
           ||||| ||||||||||||||||||||
Sbjct: 674 agaagaaagatgtcaagccagctgag 699

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>gb|BT018441.1| Zea mays clone EL01N0372H11.d mRNA sequence
          Length = 1502

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 338 agaaggaagatgtcaagccagctgag 363
           ||||| ||||||||||||||||||||
Sbjct: 290 agaagaaagatgtcaagccagctgag 315

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>gb|AY596528.1| Saccharum officinarum clone SCAGLR1043D06, complete sequence
          Length = 1544

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                               
Query: 33  gctgcaaagnagcactgatgttgagatgaagcctgc 68
           ||||||||| || |||||||| ||||||||||||||
Sbjct: 538 gctgcaaaggag-actgatgtggagatgaagcctgc 572

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>gb|AC146111.3| Pan troglodytes BAC clone RP43-38O16 from 7, complete sequence
          Length = 158242

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 583   ccagcaatggaagacaagaaggaag 607
             |||||| ||||||||||||||||||
Sbjct: 93081 ccagcactggaagacaagaaggaag 93057

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>emb|X91855.1|PKMSP1GEN P.knowlesi MSP-1 gene
          Length = 981

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 587 caatggaagacaagaaggaag 607
           |||||||||||||||||||||
Sbjct: 893 caatggaagacaagaaggaag 913

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>ref|XM_307789.2| Anopheles gambiae str. PEST ENSANGP00000012955
           (ENSANGG00000010466), partial mRNA
          Length = 678

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 567 tgatgccgttccgtctccagc 587
           |||||||||||||||||||||
Sbjct: 278 tgatgccgttccgtctccagc 258

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>dbj|AP003466.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1047C11
          Length = 154371

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 488   aagatatcaagccagctgggg 508
             |||||||||||||||||||||
Sbjct: 57519 aagatatcaagccagctgggg 57539



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 440   aagatatcaagccagctgggg 460
             |||||||||||||||||||||
Sbjct: 57519 aagatatcaagccagctgggg 57539

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>gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosome 14, complete sequence
          Length = 143851

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    cccgcagaacacaaggaaga 179
              ||||||||||||||||||||
Sbjct: 138798 cccgcagaacacaaggaaga 138817

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>ref|XM_475121.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1884

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 acaaggaagatgtcaaacta 189
           ||||||||||||||||||||
Sbjct: 269 acaaggaagatgtcaaacta 288

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>gb|AF224315.1| Gallus gallus Frizzled-2 (cFz-2) mRNA, partial cds
          Length = 2918

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    attcggcacgaggggttgctgagg 24
            ||||||||||||||| ||||||||
Sbjct: 1751 attcggcacgagggggtgctgagg 1774

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>gb|AC095022.4| Sus scrofa clone RP44-374C1, complete sequence
          Length = 61497

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 519   tccggcaccagtggttgaag 538
             ||||||||||||||||||||
Sbjct: 13311 tccggcaccagtggttgaag 13330

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>emb|CR733881.2|CNS0GT1K Tetraodon nigroviridis full-length cDNA
          Length = 568

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 431 gttgatgaagatgtgaaagctgct 408

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>emb|CR720476.2|CNS0GIV6 Tetraodon nigroviridis full-length cDNA
          Length = 577

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 457 gttgatgaagatgtgaaagctgct 434

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>emb|CR717798.2|CNS0GGSS Tetraodon nigroviridis full-length cDNA
          Length = 553

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 416 gttgatgaagatgtgaaagctgct 393

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>emb|CR716786.2|CNS0GG0R Tetraodon nigroviridis full-length cDNA
          Length = 526

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366

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>emb|CR706085.2|CNS0G7RL Tetraodon nigroviridis full-length cDNA
          Length = 668

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 424 gttgatgaagatgtgaaagctgct 401

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>emb|CR706333.2|CNS0G7YH Tetraodon nigroviridis full-length cDNA
          Length = 677

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 424 gttgatgaagacgtgaaagctgct 401

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>emb|CR702087.2|CNS0G4OJ Tetraodon nigroviridis full-length cDNA
          Length = 559

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 422 gttgatgaagatgtgaaagctgct 399

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>emb|CR698551.2|CNS0G1YB Tetraodon nigroviridis full-length cDNA
          Length = 558

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 425 gttgatgaagatgtgaaagctgct 402

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>emb|CR688935.2|CNS0FUJ7 Tetraodon nigroviridis full-length cDNA
          Length = 580

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 443 gttgatgaagatgtgaaagctgct 420

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>emb|CR686526.2|CNS0FSOA Tetraodon nigroviridis full-length cDNA
          Length = 525

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 392 gttgatgaagatgtgaaagctgct 369

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>emb|CR673871.2|CNS0FIXH Tetraodon nigroviridis full-length cDNA
          Length = 595

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 462 gttgatgaagatgtgaaagctgct 439

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>emb|CR632767.2|CNS0EN7P Tetraodon nigroviridis full-length cDNA
          Length = 522

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366

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>emb|CR634094.2|CNS0EO8K Tetraodon nigroviridis full-length cDNA
          Length = 564

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 429 gttgatgaagatgtgaaagctgct 406

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>emb|CR633412.2|CNS0ENPM Tetraodon nigroviridis full-length cDNA
          Length = 522

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366

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>emb|CR632968.2|CNS0ENDA Tetraodon nigroviridis full-length cDNA
          Length = 522

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  gttgatgaagaggtgaaagctgct 117
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366

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>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence
          Length = 129921

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    acaaatgatgtggagatgaa 92
             ||||||||||||||||||||
Sbjct: 64052 acaaatgatgtggagatgaa 64071

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>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1)
             gene, complete cds
          Length = 169976

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 585   agcaatggaagacaagaaggaaga 608
             |||||||||||| |||||||||||
Sbjct: 77874 agcaatggaagaaaagaaggaaga 77851

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>emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin
          Length = 294540

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 534    tgaagacaaggaagatgtca 553
              ||||||||||||||||||||
Sbjct: 235891 tgaagacaaggaagatgtca 235872

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>gb|BC070113.1| Homo sapiens cDNA clone IMAGE:5268363
          Length = 4610

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  tgaagacaaggaagatgtca 553
            ||||||||||||||||||||
Sbjct: 2784 tgaagacaaggaagatgtca 2803

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>gb|BC041357.1| Homo sapiens cDNA clone IMAGE:5272988
          Length = 4615

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  tgaagacaaggaagatgtca 553
            ||||||||||||||||||||
Sbjct: 2789 tgaagacaaggaagatgtca 2808

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>gb|AC137553.45| Medicago truncatula clone mth2-20p12, complete sequence
          Length = 134249

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    acaaatgatgtggagatgaa 92
             ||||||||||||||||||||
Sbjct: 30088 acaaatgatgtggagatgaa 30107

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>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 530    tggttgaagacaaggaagat 549
              ||||||||||||||||||||
Sbjct: 399716 tggttgaagacaaggaagat 399697

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>dbj|AK132167.1| Mus musculus 17 days embryo head cDNA, RIKEN full-length enriched
            library, clone:3321401J18 product:hypothetical protein,
            full insert sequence
          Length = 5500

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 558  agctgaagctgatgccgttccgtctcca 585
            ||||| ||||||||||||||| ||||||
Sbjct: 4265 agctggagctgatgccgttccttctcca 4238

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>dbj|AK146889.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:I920069H02 product:hypothetical
            tRNA-binding arm containing protein, full insert sequence
          Length = 2284

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 558  agctgaagctgatgccgttccgtctcca 585
            ||||| ||||||||||||||| ||||||
Sbjct: 1050 agctggagctgatgccgttccttctcca 1023

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>gb|AF133268.1|AF133268 Manduca sexta glutathione S-transferase GST-msolf1 mRNA, complete
           cds
          Length = 805

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 602 aggaagatgttaagccatcc 621
           ||||||||||||||||||||
Sbjct: 509 aggaagatgttaagccatcc 490

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>gb|AC010680.10| Homo sapiens BAC clone RP11-171I2 from 2, complete sequence
          Length = 177476

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 534   tgaagacaaggaagatgtca 553
             ||||||||||||||||||||
Sbjct: 18548 tgaagacaaggaagatgtca 18567

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>ref|NM_001033208.1| Mus musculus expressed sequence AA407270 (AA407270), mRNA
          Length = 2284

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 558  agctgaagctgatgccgttccgtctcca 585
            ||||| ||||||||||||||| ||||||
Sbjct: 1050 agctggagctgatgccgttccttctcca 1023

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>gb|AC011286.7| Homo sapiens BAC clone RP11-4H21 from 2, complete sequence
          Length = 168863

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 328   gtggaagacaagaaggaagatgtcaagc 355
             ||||||| |||||||||||||| |||||
Sbjct: 48404 gtggaagtcaagaaggaagatgccaagc 48431

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>gb|AC149887.2| Xenopus tropicalis clone ISB-146F11, complete sequence
          Length = 91514

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 584   cagcaatggaagacaagaag 603
             ||||||||||||||||||||
Sbjct: 67508 cagcaatggaagacaagaag 67489

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>gb|AC151340.2| Xenopus tropicalis clone ISB-362A3, complete sequence
          Length = 101442

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 584   cagcaatggaagacaagaag 603
             ||||||||||||||||||||
Sbjct: 19449 cagcaatggaagacaagaag 19430

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>emb|AL929259.13| Mouse DNA sequence from clone RP23-141E12 on chromosome 2, complete
             sequence
          Length = 153645

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 593   aagacaagaaggaagatgtt 612
             ||||||||||||||||||||
Sbjct: 72964 aagacaagaaggaagatgtt 72945

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>emb|CT010511.9| Mouse DNA sequence from clone RP23-222I19 on chromosome 14, complete
              sequence
          Length = 181740

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    cccgcagaacacaaggaaga 179
              ||||||||||||||||||||
Sbjct: 152618 cccgcagaacacaaggaaga 152599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,743,514
Number of Sequences: 3902068
Number of extensions: 5743514
Number of successful extensions: 116176
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 116059
Number of HSP's gapped (non-prelim): 119
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result