ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal33n02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_480940.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 490 bits (247), Expect = e-135 Identities = 412/467 (88%) Strand = Plus / Plus Query: 44 ccatcgaaggaggagcctattcccatcatgaaatacagcttcctgcccaagcactcgcct 103 |||||||||||||| || || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 1514 ccatcgaaggaggaacccatccccatcatgaagtacagctttctgcccaagcactcacct 1573 Query: 104 ctccccctgaggatgcgccttgtaaagcgccacagtggtaccttgctctcactgatgata 163 ||||| |||||||||||||||| ||||| || || || || ||||||||| ||||||| Sbjct: 1574 ctccctttgaggatgcgccttgtgaagcgacatagcggaacattgctctcagtgatgatt 1633 Query: 164 cactacgcgtcgaacccaatgttgccgcagccactgagcaatgttacattcattgttaag 223 || ||||| || |||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 1634 caatacgcatcaaacccaatgttgccacagccgctgagcaatgttacgttcattgttaag 1693 Query: 224 cttcctgtggatccaactctgcttaatgtttctcccaaggccgtgttgaaccgggcagag 283 ||||||||||| ||||||||||| |||||||| |||||||| ||| |||| ||||||||| Sbjct: 1694 cttcctgtggacccaactctgctaaatgtttcacccaaggctgtgctgaatcgggcagag 1753 Query: 284 agggagctcaggtggcacatctcagacattcctctgaaaggtcccgctggacggttgaga 343 ||||||||||||||||||||| |||||||||| |||||||| || |||||||| ||||| Sbjct: 1754 agggagctcaggtggcacatcccagacattcccctgaaaggacctgctggacgtttgagg 1813 Query: 344 gcacggatgcccgtagaccaggactccaaagatggtgaactggaggttgttggaatggtc 403 || |||||||| ||||| |||||||| || |||||||| || ||||||||||| ||||| Sbjct: 1814 gctcggatgcctgtagatcaggactcaaaggatggtgagctagaggttgttgggatggtg 1873 Query: 404 aagtttgcttaccaagggccattcacattgtctggcatcaagctctgcccagccatcaat 463 ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| || Sbjct: 1874 aagtttgcttaccaagggccatttacattgtctggcatcaaactatgcccagccactgat 1933 Query: 464 agcactgcccagtttaatgaagttggccacaccttctccagcgggag 510 |||| || ||||||||||| | |||||||||||||||||| ||||| Sbjct: 1934 ggcacggctcagtttaatgaggctggccacaccttctccagtgggag 1980 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 536 ttggtaccttctttgtattgtag 558 ||||||||||||||||||||||| Sbjct: 1997 ttggtaccttctttgtattgtag 2019
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 490 bits (247), Expect = e-135 Identities = 412/467 (88%) Strand = Plus / Minus Query: 44 ccatcgaaggaggagcctattcccatcatgaaatacagcttcctgcccaagcactcgcct 103 |||||||||||||| || || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 8789973 ccatcgaaggaggaacccatccccatcatgaagtacagctttctgcccaagcactcacct 8789914 Query: 104 ctccccctgaggatgcgccttgtaaagcgccacagtggtaccttgctctcactgatgata 163 ||||| |||||||||||||||| ||||| || || || || ||||||||| ||||||| Sbjct: 8789913 ctccctttgaggatgcgccttgtgaagcgacatagcggaacattgctctcagtgatgatt 8789854 Query: 164 cactacgcgtcgaacccaatgttgccgcagccactgagcaatgttacattcattgttaag 223 || ||||| || |||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 8789853 caatacgcatcaaacccaatgttgccacagccgctgagcaatgttacgttcattgttaag 8789794 Query: 224 cttcctgtggatccaactctgcttaatgtttctcccaaggccgtgttgaaccgggcagag 283 ||||||||||| ||||||||||| |||||||| |||||||| ||| |||| ||||||||| Sbjct: 8789793 cttcctgtggacccaactctgctaaatgtttcacccaaggctgtgctgaatcgggcagag 8789734 Query: 284 agggagctcaggtggcacatctcagacattcctctgaaaggtcccgctggacggttgaga 343 ||||||||||||||||||||| |||||||||| |||||||| || |||||||| ||||| Sbjct: 8789733 agggagctcaggtggcacatcccagacattcccctgaaaggacctgctggacgtttgagg 8789674 Query: 344 gcacggatgcccgtagaccaggactccaaagatggtgaactggaggttgttggaatggtc 403 || |||||||| ||||| |||||||| || |||||||| || ||||||||||| ||||| Sbjct: 8789673 gctcggatgcctgtagatcaggactcaaaggatggtgagctagaggttgttgggatggtg 8789614 Query: 404 aagtttgcttaccaagggccattcacattgtctggcatcaagctctgcccagccatcaat 463 ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| || Sbjct: 8789613 aagtttgcttaccaagggccatttacattgtctggcatcaaactatgcccagccactgat 8789554 Query: 464 agcactgcccagtttaatgaagttggccacaccttctccagcgggag 510 |||| || ||||||||||| | |||||||||||||||||| ||||| Sbjct: 8789553 ggcacggctcagtttaatgaggctggccacaccttctccagtgggag 8789507 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 536 ttggtaccttctttgtattgtag 558 ||||||||||||||||||||||| Sbjct: 8789490 ttggtaccttctttgtattgtag 8789468
>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0437G01 Length = 147101 Score = 490 bits (247), Expect = e-135 Identities = 412/467 (88%) Strand = Plus / Minus Query: 44 ccatcgaaggaggagcctattcccatcatgaaatacagcttcctgcccaagcactcgcct 103 |||||||||||||| || || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 67722 ccatcgaaggaggaacccatccccatcatgaagtacagctttctgcccaagcactcacct 67663 Query: 104 ctccccctgaggatgcgccttgtaaagcgccacagtggtaccttgctctcactgatgata 163 ||||| |||||||||||||||| ||||| || || || || ||||||||| ||||||| Sbjct: 67662 ctccctttgaggatgcgccttgtgaagcgacatagcggaacattgctctcagtgatgatt 67603 Query: 164 cactacgcgtcgaacccaatgttgccgcagccactgagcaatgttacattcattgttaag 223 || ||||| || |||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 67602 caatacgcatcaaacccaatgttgccacagccgctgagcaatgttacgttcattgttaag 67543 Query: 224 cttcctgtggatccaactctgcttaatgtttctcccaaggccgtgttgaaccgggcagag 283 ||||||||||| ||||||||||| |||||||| |||||||| ||| |||| ||||||||| Sbjct: 67542 cttcctgtggacccaactctgctaaatgtttcacccaaggctgtgctgaatcgggcagag 67483 Query: 284 agggagctcaggtggcacatctcagacattcctctgaaaggtcccgctggacggttgaga 343 ||||||||||||||||||||| |||||||||| |||||||| || |||||||| ||||| Sbjct: 67482 agggagctcaggtggcacatcccagacattcccctgaaaggacctgctggacgtttgagg 67423 Query: 344 gcacggatgcccgtagaccaggactccaaagatggtgaactggaggttgttggaatggtc 403 || |||||||| ||||| |||||||| || |||||||| || ||||||||||| ||||| Sbjct: 67422 gctcggatgcctgtagatcaggactcaaaggatggtgagctagaggttgttgggatggtg 67363 Query: 404 aagtttgcttaccaagggccattcacattgtctggcatcaagctctgcccagccatcaat 463 ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| || Sbjct: 67362 aagtttgcttaccaagggccatttacattgtctggcatcaaactatgcccagccactgat 67303 Query: 464 agcactgcccagtttaatgaagttggccacaccttctccagcgggag 510 |||| || ||||||||||| | |||||||||||||||||| ||||| Sbjct: 67302 ggcacggctcagtttaatgaggctggccacaccttctccagtgggag 67256 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 536 ttggtaccttctttgtattgtag 558 ||||||||||||||||||||||| Sbjct: 67239 ttggtaccttctttgtattgtag 67217
>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0070J06 Length = 142303 Score = 490 bits (247), Expect = e-135 Identities = 412/467 (88%) Strand = Plus / Minus Query: 44 ccatcgaaggaggagcctattcccatcatgaaatacagcttcctgcccaagcactcgcct 103 |||||||||||||| || || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 132952 ccatcgaaggaggaacccatccccatcatgaagtacagctttctgcccaagcactcacct 132893 Query: 104 ctccccctgaggatgcgccttgtaaagcgccacagtggtaccttgctctcactgatgata 163 ||||| |||||||||||||||| ||||| || || || || ||||||||| ||||||| Sbjct: 132892 ctccctttgaggatgcgccttgtgaagcgacatagcggaacattgctctcagtgatgatt 132833 Query: 164 cactacgcgtcgaacccaatgttgccgcagccactgagcaatgttacattcattgttaag 223 || ||||| || |||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 132832 caatacgcatcaaacccaatgttgccacagccgctgagcaatgttacgttcattgttaag 132773 Query: 224 cttcctgtggatccaactctgcttaatgtttctcccaaggccgtgttgaaccgggcagag 283 ||||||||||| ||||||||||| |||||||| |||||||| ||| |||| ||||||||| Sbjct: 132772 cttcctgtggacccaactctgctaaatgtttcacccaaggctgtgctgaatcgggcagag 132713 Query: 284 agggagctcaggtggcacatctcagacattcctctgaaaggtcccgctggacggttgaga 343 ||||||||||||||||||||| |||||||||| |||||||| || |||||||| ||||| Sbjct: 132712 agggagctcaggtggcacatcccagacattcccctgaaaggacctgctggacgtttgagg 132653 Query: 344 gcacggatgcccgtagaccaggactccaaagatggtgaactggaggttgttggaatggtc 403 || |||||||| ||||| |||||||| || |||||||| || ||||||||||| ||||| Sbjct: 132652 gctcggatgcctgtagatcaggactcaaaggatggtgagctagaggttgttgggatggtg 132593 Query: 404 aagtttgcttaccaagggccattcacattgtctggcatcaagctctgcccagccatcaat 463 ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| || Sbjct: 132592 aagtttgcttaccaagggccatttacattgtctggcatcaaactatgcccagccactgat 132533 Query: 464 agcactgcccagtttaatgaagttggccacaccttctccagcgggag 510 |||| || ||||||||||| | |||||||||||||||||| ||||| Sbjct: 132532 ggcacggctcagtttaatgaggctggccacaccttctccagtgggag 132486 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 536 ttggtaccttctttgtattgtag 558 ||||||||||||||||||||||| Sbjct: 132469 ttggtaccttctttgtattgtag 132447
>dbj|AK121452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142L20, full insert sequence Length = 2149 Score = 490 bits (247), Expect = e-135 Identities = 412/467 (88%) Strand = Plus / Plus Query: 44 ccatcgaaggaggagcctattcccatcatgaaatacagcttcctgcccaagcactcgcct 103 |||||||||||||| || || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 1516 ccatcgaaggaggaacccatccccatcatgaagtacagctttctgcccaagcactcacct 1575 Query: 104 ctccccctgaggatgcgccttgtaaagcgccacagtggtaccttgctctcactgatgata 163 ||||| |||||||||||||||| ||||| || || || || ||||||||| ||||||| Sbjct: 1576 ctccctttgaggatgcgccttgtgaagcgacatagcggaacattgctctcagtgatgatt 1635 Query: 164 cactacgcgtcgaacccaatgttgccgcagccactgagcaatgttacattcattgttaag 223 || ||||| || |||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 1636 caatacgcatcaaacccaatgttgccacagccgctgagcaatgttacgttcattgttaag 1695 Query: 224 cttcctgtggatccaactctgcttaatgtttctcccaaggccgtgttgaaccgggcagag 283 ||||||||||| ||||||||||| |||||||| |||||||| ||| |||| ||||||||| Sbjct: 1696 cttcctgtggacccaactctgctaaatgtttcacccaaggctgtgctgaatcgggcagag 1755 Query: 284 agggagctcaggtggcacatctcagacattcctctgaaaggtcccgctggacggttgaga 343 ||||||||||||||||||||| |||||||||| |||||||| || |||||||| ||||| Sbjct: 1756 agggagctcaggtggcacatcccagacattcccctgaaaggacctgctggacgtttgagg 1815 Query: 344 gcacggatgcccgtagaccaggactccaaagatggtgaactggaggttgttggaatggtc 403 || |||||||| ||||| |||||||| || |||||||| || ||||||||||| ||||| Sbjct: 1816 gctcggatgcctgtagatcaggactcaaaggatggtgagctagaggttgttgggatggtg 1875 Query: 404 aagtttgcttaccaagggccattcacattgtctggcatcaagctctgcccagccatcaat 463 ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| || Sbjct: 1876 aagtttgcttaccaagggccatttacattgtctggcatcaaactatgcccagccactgat 1935 Query: 464 agcactgcccagtttaatgaagttggccacaccttctccagcgggag 510 |||| || ||||||||||| | |||||||||||||||||| ||||| Sbjct: 1936 ggcacggctcagtttaatgaggctggccacaccttctccagtgggag 1982 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 536 ttggtaccttctttgtattgtag 558 ||||||||||||||||||||||| Sbjct: 1999 ttggtaccttctttgtattgtag 2021
>dbj|AK102707.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104B11, full insert sequence Length = 2141 Score = 490 bits (247), Expect = e-135 Identities = 412/467 (88%) Strand = Plus / Plus Query: 44 ccatcgaaggaggagcctattcccatcatgaaatacagcttcctgcccaagcactcgcct 103 |||||||||||||| || || ||||||||||| |||||||| |||||||||||||| ||| Sbjct: 1514 ccatcgaaggaggaacccatccccatcatgaagtacagctttctgcccaagcactcacct 1573 Query: 104 ctccccctgaggatgcgccttgtaaagcgccacagtggtaccttgctctcactgatgata 163 ||||| |||||||||||||||| ||||| || || || || ||||||||| ||||||| Sbjct: 1574 ctccctttgaggatgcgccttgtgaagcgacatagcggaacattgctctcagtgatgatt 1633 Query: 164 cactacgcgtcgaacccaatgttgccgcagccactgagcaatgttacattcattgttaag 223 || ||||| || |||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 1634 caatacgcatcaaacccaatgttgccacagccgctgagcaatgttacgttcattgttaag 1693 Query: 224 cttcctgtggatccaactctgcttaatgtttctcccaaggccgtgttgaaccgggcagag 283 ||||||||||| ||||||||||| |||||||| |||||||| ||| |||| ||||||||| Sbjct: 1694 cttcctgtggacccaactctgctaaatgtttcacccaaggctgtgctgaatcgggcagag 1753 Query: 284 agggagctcaggtggcacatctcagacattcctctgaaaggtcccgctggacggttgaga 343 ||||||||||||||||||||| |||||||||| |||||||| || |||||||| ||||| Sbjct: 1754 agggagctcaggtggcacatcccagacattcccctgaaaggacctgctggacgtttgagg 1813 Query: 344 gcacggatgcccgtagaccaggactccaaagatggtgaactggaggttgttggaatggtc 403 || |||||||| ||||| |||||||| || |||||||| || ||||||||||| ||||| Sbjct: 1814 gctcggatgcctgtagatcaggactcaaaggatggtgagctagaggttgttgggatggtg 1873 Query: 404 aagtttgcttaccaagggccattcacattgtctggcatcaagctctgcccagccatcaat 463 ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| || Sbjct: 1874 aagtttgcttaccaagggccatttacattgtctggcatcaaactatgcccagccactgat 1933 Query: 464 agcactgcccagtttaatgaagttggccacaccttctccagcgggag 510 |||| || ||||||||||| | |||||||||||||||||| ||||| Sbjct: 1934 ggcacggctcagtttaatgaggctggccacaccttctccagtgggag 1980 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 536 ttggtaccttctttgtattgtag 558 ||||||||||||||||||||||| Sbjct: 1997 ttggtaccttctttgtattgtag 2019
>gb|AY105218.1| Zea mays PCO148558 mRNA sequence Length = 743 Score = 400 bits (202), Expect = e-108 Identities = 391/454 (86%) Strand = Plus / Plus Query: 62 attcccatcatgaaatacagcttcctgcccaagcactcgcctctccccctgaggatgcgc 121 |||||| ||||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 134 attcccctcatgaagtacagcttcctgccgaagcactcacctctccctttgaggatgcgc 193 Query: 122 cttgtaaagcgccacagtggtaccttgctctcactgatgatacactacgcgtcgaaccca 181 || || |||||||| ||||| || || |||||| |||||||||| ||||| || || ||| Sbjct: 194 ctagtgaagcgccatagtggaacgttactctcagtgatgatacagtacgcatccaatcca 253 Query: 182 atgttgccgcagccactgagcaatgttacattcattgttaagcttcctgtggatccaact 241 ||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 254 atgctgccccagcctctgagcaatgttacattcgttgttaagcttcctgtggatcctact 313 Query: 242 ctgcttaatgtttctcccaaggccgtgttgaaccgggcagagagggagctcaggtggcac 301 ||||| |||||||| |||||||| ||| | ||||||||||||| ||| | || ||||| Sbjct: 314 ctgctcaatgtttcacccaaggctgtgctaaaccgggcagagaaagagtttagatggcat 373 Query: 302 atctcagacattcctctgaaaggtcccgctggacggttgagagcacggatgcccgtagac 361 || ||||||||||| ||||||||||| || || || | || || |||||||| || ||| Sbjct: 374 atttcagacattcccctgaaaggtccagccggcaggctcagggcgcggatgcctgttgac 433 Query: 362 caggactccaaagatggtgaactggaggttgttggaatggtcaagtttgcttaccaaggg 421 || ||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 434 caagactccaaagatggtgagctagaggttgttgggatggtgaagtttgcttaccaaggt 493 Query: 422 ccattcacattgtctggcatcaagctctgcccagccatcaatagcactgcccagtttaat 481 |||||||||||||||||||| || || |||||||||| || ||| |||||| |||||| Sbjct: 494 ccattcacattgtctggcattaaactatgcccagccactgatggcattgcccaatttaat 553 Query: 482 gaagttggccacaccttctccagcgggagctacc 515 ||||||||||| ||||||||||| ||||| |||| Sbjct: 554 gaagttggccataccttctccagtgggagttacc 587
>ref|XM_695823.1| PREDICTED: Danio rerio similar to fibrillin 2 precursor (LOC572140), partial mRNA Length = 676 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 gcgggagctaccgttgcatctg 525 |||||||||||||||||||||| Sbjct: 611 gcgggagctaccgttgcatctg 632
>gb|AC115124.6| Mus musculus BAC clone RP24-349M22 from chromosome 18, complete sequence Length = 137371 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 aggtggcacatctcagacatt 313 ||||||||||||||||||||| Sbjct: 117258 aggtggcacatctcagacatt 117238
>gb|AC127368.3| Mus musculus BAC clone RP23-22J14 from chromosome 18, complete sequence Length = 206102 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 aggtggcacatctcagacatt 313 ||||||||||||||||||||| Sbjct: 166960 aggtggcacatctcagacatt 166980
>emb|AL035419.12|HS1100H13 Human DNA sequence from clone RP5-1100H13 on chromosome 20q11.2 Contains the 3' end of the gene for a novel protein (KIAA1219), a novel gene, a HSPC037 pseudogene, the C20orf95 gene for a novel RhoGAP domain-containing protein and two CpG islands, complete sequence Length = 116792 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cctcttcctgtgaagacacca 46 ||||||||||||||||||||| Sbjct: 89429 cctcttcctgtgaagacacca 89409
>emb|AL606902.26| Mouse DNA sequence from clone RP23-167A12 on chromosome 4, complete sequence Length = 100421 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 agctcaggtggcacatctcag 308 ||||||||||||||||||||| Sbjct: 55913 agctcaggtggcacatctcag 55933
>gb|DQ242512.1| Neurospora crassa CSN-4 (NCU07361) mRNA, complete cds Length = 1323 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cgcgtcgaacccaatgttgc 188 |||||||||||||||||||| Sbjct: 1026 cgcgtcgaacccaatgttgc 1007
>gb|AC169385.2| Mus musculus BAC clone RP23-247C1 from chromosome 16, complete sequence Length = 206814 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 agcactcgcctctccccctg 112 |||||||||||||||||||| Sbjct: 132138 agcactcgcctctccccctg 132119
>ref|XM_953041.1| Neurospora crassa OR74A hypothetical protein (NCU07361.1) partial mRNA Length = 1323 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cgcgtcgaacccaatgttgc 188 |||||||||||||||||||| Sbjct: 1026 cgcgtcgaacccaatgttgc 1007
>ref|XM_327646.1| Neurospora crassa OR74A hypothetical protein (NCU07361.1) partial mRNA Length = 1323 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cgcgtcgaacccaatgttgc 188 |||||||||||||||||||| Sbjct: 1026 cgcgtcgaacccaatgttgc 1007
>gb|AC134446.4| Mus musculus BAC clone RP24-173D10 from chromosome 17, complete sequence Length = 131657 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ctcttcctgtgaagacacca 46 |||||||||||||||||||| Sbjct: 103670 ctcttcctgtgaagacacca 103689
>gb|AC120779.24| Mus musculus strain C57BL/6J clone rp23-194d11 map 17, complete sequence Length = 235634 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ctcttcctgtgaagacacca 46 |||||||||||||||||||| Sbjct: 96456 ctcttcctgtgaagacacca 96475
>emb|BX295539.1|NCB1D14 Neurospora crassa genomic DNA, BAC contig B1D14 Length = 138898 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 acaccttctccagcgggagc 511 |||||||||||||||||||| Sbjct: 44434 acaccttctccagcgggagc 44415
>gb|AC154606.2| Mus musculus BAC clone RP23-252E10 from chromosome 16, complete sequence Length = 181697 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 agcactcgcctctccccctg 112 |||||||||||||||||||| Sbjct: 32996 agcactcgcctctccccctg 32977
>dbj|AB084378.1| Euphausia superba mitochondrial DNA, trnM to rrnS gene region Length = 14606 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 cattcattgttaagcttcct 229 |||||||||||||||||||| Sbjct: 8802 cattcattgttaagcttcct 8783 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,367,758 Number of Sequences: 3902068 Number of extensions: 4367758 Number of successful extensions: 92129 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92071 Number of HSP's gapped (non-prelim): 57 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
