ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal33m13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482599.1| Oryza sativa (japonica cultivar-group), mRNA 266 7e-68
2dbj|AK067282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 7e-68
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
4dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
5dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
6ref|NM_122909.2| Arabidopsis thaliana unknown protein AT5G35180 ... 48 0.030
7gb|AF436836.1|AF436836 Arabidopsis thaliana AT5g35180/T25C13_60 ... 48 0.030
8gb|AF416331.1| Ruegeria sp. PR1b plasmid pSD25, complete sequence 44 0.47
9gb|AF003383.1| Caenorhabditis elegans cosmid ZC250, complete seq... 42 1.9
10gb|AC048351.18| Homo sapiens 3 BAC RP11-175P19 (Roswell Park Can... 42 1.9
11gb|AC165437.5| Mus musculus chromosome 15, clone RP23-285N11, co... 42 1.9
12gb|AC165418.6| Mus musculus chromosome 7, clone RP23-148M16, com... 40 7.4
13ref|XM_450981.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.4
14gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 7.4
15gb|AC147174.2| Xenopus tropicalis clone CH216-51H8, complete seq... 40 7.4
16gb|AC148454.2| Xenopus tropicalis clone CH216-161F9, complete se... 40 7.4
17gb|AC182652.2| Populus trichocarpa clone Pop1-120B14, complete s... 40 7.4
18gb|AC147206.2| Xenopus tropicalis clone CH216-39C21, complete se... 40 7.4
19gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 7.4
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.4
21gb|AC147170.3| Xenopus tropicalis clone CH216-154J22, complete s... 40 7.4
22gb|AC183669.3| Pan troglodytes BAC clone CH251-549L23 from chrom... 40 7.4
23gb|AC123045.2| Mus musculus BAC clone RP24-549E10 from chromosom... 40 7.4
24gb|AC123687.20| Mus musculus chromosome 5, clone RP23-314A12, co... 40 7.4
25emb|AL391237.12| Human DNA sequence from clone RP13-125M24 on ch... 40 7.4
26ref|XM_789771.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.4
27gb|AC061709.25| Homo sapiens 12 BAC RP11-417O18 (Roswell Park Ca... 40 7.4
28emb|BX511081.8| Zebrafish DNA sequence from clone DKEY-6B12 in l... 40 7.4
29gb|AF230499.1| Oryza sativa subsp. japonica serine/threonine pro... 40 7.4
30dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
31dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
32gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 40 7.4
33gb|AC004470.2| Homo sapiens X BAC GS1-433O24 (Genome Systems Hum... 40 7.4
34gb|AC127286.3| Mus musculus BAC clone RP23-340I4 from chromosome... 40 7.4
35dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
36dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
37dbj|AK071360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
38emb|BX539328.4| Mouse DNA sequence from clone RP23-108I21 on chr... 40 7.4
39gb|AC110537.19| Mus musculus chromosome 5, clone RP23-44A4, comp... 40 7.4
40gb|AC149091.3| Mus musculus BAC clone RP23-49P22 from 7, complet... 40 7.4
41gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, compl... 40 7.4
42gb|AC167544.9| Mus musculus chromosome 7, clone RP24-255K20, com... 40 7.4
43emb|AL928575.7| Mouse DNA sequence from clone RP23-37A11 on chro... 40 7.4
44emb|AL671872.10| Mouse DNA sequence from clone RP23-151N17 on ch... 40 7.4 
>ref|XM_482599.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2292

 Score =  266 bits (134), Expect = 7e-68
 Identities = 327/392 (83%), Gaps = 12/392 (3%)
 Strand = Plus / Plus

                                                                       
Query: 164 ttggatcaaacgaagaaaggagagattgcatgtgcaactcctggtgaagctcagaaatgg 223
           ||||||||||| ||||||||||||||||||||||     || |||||||||  |||||||
Sbjct: 379 ttggatcaaacaaagaaaggagagattgcatgtggggaccccggtgaagctaggaaatgg 438

                                                                       
Query: 224 accgaagcatttgagcaggctaaacaacaggctgagtatgacctga---caagaggggtt 280
              ||||||||||||||||| ||||| |||||||| ||||||||||   | |||||||||
Sbjct: 439 gttgaagcatttgagcaggcaaaacagcaggctgattatgacctgatgacgagaggggtt 498

                                                                       
Query: 281 aactggaaaagattgcagagtgaaaacgagtttaatcttgatggacatcgacctcgggta 340
           |  ||||| ||||  |||| |||||||||| ||||||||||||| |||||||| || |||
Sbjct: 499 agttggaatagatcccagaatgaaaacgagcttaatcttgatgggcatcgaccacgtgta 558

                                                                       
Query: 341 agaaga---------ggcttggggaaacttgtgcgcattggcaaaggaccagaaatgctc 391
           || |||         ||||||||||||||||| || ||||| ||||| ||||||| ||||
Sbjct: 559 aggagatatgcacaaggcttggggaaacttgtacgaattggtaaagggccagaaaagctc 618

                                                                       
Query: 392 cttcgacagtcctccgatcttcaaagccatgaaagggttaacacaaactttggaggtgat 451
            | || ||||| ||  |||||||||||||||| |   |||| |||||||||||||| |||
Sbjct: 619 ttgcggcagtcttcaaatcttcaaagccatgagataattaatacaaactttggaggcgat 678

                                                                       
Query: 452 actggagatgcacttgaagcacatgaatggagatttgttcgaacattaaatggaattaga 511
            ||||||||||| | |||||||| |||||||||| |||||||||||| ||||| || |||
Sbjct: 679 tctggagatgcattcgaagcacacgaatggagatatgttcgaacatttaatggtataaga 738

                                           
Query: 512 atttttgaagatattgcaaactcaaagggtgg 543
           ||||||||||||||||||||| ||||||||||
Sbjct: 739 atttttgaagatattgcaaacacaaagggtgg 770



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 60  aacctatccgaaagggttttgtcagtcccactcttgtggtggaggaggttggtcgc 115
           ||||||||||||||||| |||| |||| ||||||| ||||||||||| ||||||||
Sbjct: 275 aacctatccgaaagggtgttgtaagtcacactcttatggtggaggagcttggtcgc 330
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>dbj|AK067282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102K12, full
           insert sequence
          Length = 2575

 Score =  266 bits (134), Expect = 7e-68
 Identities = 327/392 (83%), Gaps = 12/392 (3%)
 Strand = Plus / Plus

                                                                       
Query: 164 ttggatcaaacgaagaaaggagagattgcatgtgcaactcctggtgaagctcagaaatgg 223
           ||||||||||| ||||||||||||||||||||||     || |||||||||  |||||||
Sbjct: 428 ttggatcaaacaaagaaaggagagattgcatgtggggaccccggtgaagctaggaaatgg 487

                                                                       
Query: 224 accgaagcatttgagcaggctaaacaacaggctgagtatgacctga---caagaggggtt 280
              ||||||||||||||||| ||||| |||||||| ||||||||||   | |||||||||
Sbjct: 488 gttgaagcatttgagcaggcaaaacagcaggctgattatgacctgatgacgagaggggtt 547

                                                                       
Query: 281 aactggaaaagattgcagagtgaaaacgagtttaatcttgatggacatcgacctcgggta 340
           |  ||||| ||||  |||| |||||||||| ||||||||||||| |||||||| || |||
Sbjct: 548 agttggaatagatcccagaatgaaaacgagcttaatcttgatgggcatcgaccacgtgta 607

                                                                       
Query: 341 agaaga---------ggcttggggaaacttgtgcgcattggcaaaggaccagaaatgctc 391
           || |||         ||||||||||||||||| || ||||| ||||| ||||||| ||||
Sbjct: 608 aggagatatgcacaaggcttggggaaacttgtacgaattggtaaagggccagaaaagctc 667

                                                                       
Query: 392 cttcgacagtcctccgatcttcaaagccatgaaagggttaacacaaactttggaggtgat 451
            | || ||||| ||  |||||||||||||||| |   |||| |||||||||||||| |||
Sbjct: 668 ttgcggcagtcttcaaatcttcaaagccatgagataattaatacaaactttggaggcgat 727

                                                                       
Query: 452 actggagatgcacttgaagcacatgaatggagatttgttcgaacattaaatggaattaga 511
            ||||||||||| | |||||||| |||||||||| |||||||||||| ||||| || |||
Sbjct: 728 tctggagatgcattcgaagcacacgaatggagatatgttcgaacatttaatggtataaga 787

                                           
Query: 512 atttttgaagatattgcaaactcaaagggtgg 543
           ||||||||||||||||||||| ||||||||||
Sbjct: 788 atttttgaagatattgcaaacacaaagggtgg 819



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 60  aacctatccgaaagggttttgtcagtcccactcttgtggtggaggaggttggtcgc 115
           ||||||||||||||||| |||| |||| ||||||| ||||||||||| ||||||||
Sbjct: 324 aacctatccgaaagggtgttgtaagtcacactcttatggtggaggagcttggtcgc 379
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                            
Query: 408      atcttcaaagccatgaaagggttaacacaaactttggaggtgatactggagatgcacttg 467
                |||||||||||||||| |   |||| |||||||||||||| ||| ||||||||||| | |
Sbjct: 21334183 atcttcaaagccatgagataattaatacaaactttggaggcgattctggagatgcattcg 21334242

                                                     
Query: 468      aagcacatgaatggagatttgttcgaacattaaatgg 504
                ||||||| |||||||||| |||||||||||| |||||
Sbjct: 21334243 aagcacacgaatggagatatgttcgaacatttaatgg 21334279



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 60       aacctatccgaaagggttttgtcagtcccactcttgtggtggaggaggttggtcgc 115
                ||||||||||||||||| |||| |||| ||||||| ||||||||||| ||||||||
Sbjct: 21331686 aacctatccgaaagggtgttgtaagtcacactcttatggtggaggagcttggtcgc 21331741



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 509      agaatttttgaagatattgcaaactcaaagg 539
                |||||||||||||||||||||||| ||||||
Sbjct: 21334896 agaatttttgaagatattgcaaacacaaagg 21334926



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 346      aggcttggggaaacttgtgcgcattggcaaagg 378
                |||||||||||||||||| || ||||| |||||
Sbjct: 21333429 aggcttggggaaacttgtacgaattggtaaagg 21333461



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                 
Query: 206      ggtgaagctcagaaatggaccgaagcatttgagcaggctaaacaacagg 254
                |||||||||  |||||||   ||||||||||||||||| ||||| ||||
Sbjct: 21332083 ggtgaagctaggaaatgggttgaagcatttgagcaggcaaaacagcagg 21332131



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 55/66 (83%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                            
Query: 249      aacaggctgagtatgacctga---caagaggggttaactggaaaagattgcagagtgaaa 305
                |||||||||| ||||||||||   | ||||||||||  ||||| ||||  |||| |||||
Sbjct: 21333211 aacaggctgattatgacctgatgacgagaggggttagttggaatagatcccagaatgaaa 21333270

                      
Query: 306      acgagt 311
                ||||||
Sbjct: 21333271 acgagt 21333276



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 164      ttggatcaaacgaagaaaggagag 187
                ||||||||||| ||||||||||||
Sbjct: 21331955 ttggatcaaacaaagaaaggagag 21331978
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>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0016C11
          Length = 170723

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                          
Query: 408    atcttcaaagccatgaaagggttaacacaaactttggaggtgatactggagatgcacttg 467
              |||||||||||||||| |   |||| |||||||||||||| ||| ||||||||||| | |
Sbjct: 160460 atcttcaaagccatgagataattaatacaaactttggaggcgattctggagatgcattcg 160519

                                                   
Query: 468    aagcacatgaatggagatttgttcgaacattaaatgg 504
              ||||||| |||||||||| |||||||||||| |||||
Sbjct: 160520 aagcacacgaatggagatatgttcgaacatttaatgg 160556



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                      
Query: 60     aacctatccgaaagggttttgtcagtcccactcttgtggtggaggaggttggtcgc 115
              ||||||||||||||||| |||| |||| ||||||| ||||||||||| ||||||||
Sbjct: 157963 aacctatccgaaagggtgttgtaagtcacactcttatggtggaggagcttggtcgc 158018



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                             
Query: 509    agaatttttgaagatattgcaaactcaaagg 539
              |||||||||||||||||||||||| ||||||
Sbjct: 161173 agaatttttgaagatattgcaaacacaaagg 161203



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 346    aggcttggggaaacttgtgcgcattggcaaagg 378
              |||||||||||||||||| || ||||| |||||
Sbjct: 159706 aggcttggggaaacttgtacgaattggtaaagg 159738



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                               
Query: 206    ggtgaagctcagaaatggaccgaagcatttgagcaggctaaacaacagg 254
              |||||||||  |||||||   ||||||||||||||||| ||||| ||||
Sbjct: 158360 ggtgaagctaggaaatgggttgaagcatttgagcaggcaaaacagcagg 158408



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 55/66 (83%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                          
Query: 249    aacaggctgagtatgacctga---caagaggggttaactggaaaagattgcagagtgaaa 305
              |||||||||| ||||||||||   | ||||||||||  ||||| ||||  |||| |||||
Sbjct: 159488 aacaggctgattatgacctgatgacgagaggggttagttggaatagatcccagaatgaaa 159547

                    
Query: 306    acgagt 311
              ||||||
Sbjct: 159548 acgagt 159553



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 164    ttggatcaaacgaagaaaggagag 187
              ||||||||||| ||||||||||||
Sbjct: 158232 ttggatcaaacaaagaaaggagag 158255
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>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0524F03
          Length = 167696

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 85/97 (87%)
 Strand = Plus / Plus

                                                                         
Query: 408   atcttcaaagccatgaaagggttaacacaaactttggaggtgatactggagatgcacttg 467
             |||||||||||||||| |   |||| |||||||||||||| ||| ||||||||||| | |
Sbjct: 34108 atcttcaaagccatgagataattaatacaaactttggaggcgattctggagatgcattcg 34167

                                                  
Query: 468   aagcacatgaatggagatttgttcgaacattaaatgg 504
             ||||||| |||||||||| |||||||||||| |||||
Sbjct: 34168 aagcacacgaatggagatatgttcgaacatttaatgg 34204



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 60    aacctatccgaaagggttttgtcagtcccactcttgtggtggaggaggttggtcgc 115
             ||||||||||||||||| |||| |||| ||||||| ||||||||||| ||||||||
Sbjct: 31611 aacctatccgaaagggtgttgtaagtcacactcttatggtggaggagcttggtcgc 31666



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 509   agaatttttgaagatattgcaaactcaaagg 539
             |||||||||||||||||||||||| ||||||
Sbjct: 34821 agaatttttgaagatattgcaaacacaaagg 34851



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 346   aggcttggggaaacttgtgcgcattggcaaagg 378
             |||||||||||||||||| || ||||| |||||
Sbjct: 33354 aggcttggggaaacttgtacgaattggtaaagg 33386



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 206   ggtgaagctcagaaatggaccgaagcatttgagcaggctaaacaacagg 254
             |||||||||  |||||||   ||||||||||||||||| ||||| ||||
Sbjct: 32008 ggtgaagctaggaaatgggttgaagcatttgagcaggcaaaacagcagg 32056



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 55/66 (83%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                         
Query: 249   aacaggctgagtatgacctga---caagaggggttaactggaaaagattgcagagtgaaa 305
             |||||||||| ||||||||||   | ||||||||||  ||||| ||||  |||| |||||
Sbjct: 33136 aacaggctgattatgacctgatgacgagaggggttagttggaatagatcccagaatgaaa 33195

                   
Query: 306   acgagt 311
             ||||||
Sbjct: 33196 acgagt 33201



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 164   ttggatcaaacgaagaaaggagag 187
             ||||||||||| ||||||||||||
Sbjct: 31880 ttggatcaaacaaagaaaggagag 31903
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>ref|NM_122909.2| Arabidopsis thaliana unknown protein AT5G35180 mRNA, complete cds
          Length = 2688

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 454 tggagatgcacttgaagcacatgaatggagatttgttcgaacattaaatggaattagaat 513
           |||||||||| | || ||||| ||||||| || |||||| ||| | |||||  |||| ||
Sbjct: 837 tggagatgcaatcgaggcacacgaatggaaatgtgttcgtacaatcaatggtgttaggat 896

                               
Query: 514 ttttgaagatattgcaaact 533
           |||||||||| |||| ||||
Sbjct: 897 ttttgaagatgttgctaact 916
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>gb|AF436836.1|AF436836 Arabidopsis thaliana AT5g35180/T25C13_60 mRNA, complete cds
          Length = 2643

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 454 tggagatgcacttgaagcacatgaatggagatttgttcgaacattaaatggaattagaat 513
           |||||||||| | || ||||| ||||||| || |||||| ||| | |||||  |||| ||
Sbjct: 792 tggagatgcaatcgaggcacacgaatggaaatgtgttcgtacaatcaatggtgttaggat 851

                               
Query: 514 ttttgaagatattgcaaact 533
           |||||||||| |||| ||||
Sbjct: 852 ttttgaagatgttgctaact 871
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>gb|AF416331.1| Ruegeria sp. PR1b plasmid pSD25, complete sequence
          Length = 148650

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 210   aagctcagaaatggaccgaagc 231
             ||||||||||||||||||||||
Sbjct: 21332 aagctcagaaatggaccgaagc 21311
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>gb|AF003383.1| Caenorhabditis elegans cosmid ZC250, complete sequence
          Length = 34372

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 418   ccatgaaagggttaacacaaa 438
             |||||||||||||||||||||
Sbjct: 12168 ccatgaaagggttaacacaaa 12188
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>gb|AC048351.18| Homo sapiens 3 BAC RP11-175P19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 161687

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 204   ctggtgaagctcagaaatgga 224
             |||||||||||||||||||||
Sbjct: 92599 ctggtgaagctcagaaatgga 92579
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>gb|AC165437.5| Mus musculus chromosome 15, clone RP23-285N11, complete sequence
          Length = 228289

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 511    aatttttgaagatattgcaaa 531
              |||||||||||||||||||||
Sbjct: 111325 aatttttgaagatattgcaaa 111345
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>gb|AC165418.6| Mus musculus chromosome 7, clone RP23-148M16, complete sequence
          Length = 205525

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    atcttcaaagccatgaaagg 427
              ||||||||||||||||||||
Sbjct: 146810 atcttcaaagccatgaaagg 146791
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>ref|XM_450981.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2396

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 466  tgaagcacatgaatggagat 485
            ||||||||||||||||||||
Sbjct: 1604 tgaagcacatgaatggagat 1585
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>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete
             sequence
          Length = 250713

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 499   aaatggaattagaatttttgaagatatt 526
             ||||| |||||||||| |||||||||||
Sbjct: 35785 aaatgaaattagaattcttgaagatatt 35758
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>gb|AC147174.2| Xenopus tropicalis clone CH216-51H8, complete sequence
          Length = 191184

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 498   taaatggaattagaatttttgaag 521
             |||||||||||||| |||||||||
Sbjct: 54933 taaatggaattagagtttttgaag 54910
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>gb|AC148454.2| Xenopus tropicalis clone CH216-161F9, complete sequence
          Length = 186914

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 498   taaatggaattagaatttttgaag 521
             |||||||||||||| |||||||||
Sbjct: 52663 taaatggaattagagtttttgaag 52640
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>gb|AC182652.2| Populus trichocarpa clone Pop1-120B14, complete sequence
          Length = 103155

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 496   attaaatggaattagaattt 515
             ||||||||||||||||||||
Sbjct: 94198 attaaatggaattagaattt 94217
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>gb|AC147206.2| Xenopus tropicalis clone CH216-39C21, complete sequence
          Length = 167795

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 498   taaatggaattagaatttttgaag 521
             |||||||||||||| |||||||||
Sbjct: 93515 taaatggaattagagtttttgaag 93492
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 498     taaatggaattagaattttt 517
               ||||||||||||||||||||
Sbjct: 1122779 taaatggaattagaattttt 1122760
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 258      agtatgacctgacaagaggg 277
                ||||||||||||||||||||
Sbjct: 20395857 agtatgacctgacaagaggg 20395838
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>gb|AC147170.3| Xenopus tropicalis clone CH216-154J22, complete sequence
          Length = 163973

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 498   taaatggaattagaatttttgaag 521
             |||||||||||||| |||||||||
Sbjct: 95852 taaatggaattagagtttttgaag 95829
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>gb|AC183669.3| Pan troglodytes BAC clone CH251-549L23 from chromosome 19, complete
             sequence
          Length = 139061

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 178   gaaaggagagattgcatgtgcaac 201
             ||||||||||||| ||||||||||
Sbjct: 91084 gaaaggagagattccatgtgcaac 91107
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>gb|AC123045.2| Mus musculus BAC clone RP24-549E10 from chromosome 7, complete sequence
          Length = 142457

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    atcttcaaagccatgaaagg 427
              ||||||||||||||||||||
Sbjct: 104295 atcttcaaagccatgaaagg 104314
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>gb|AC123687.20| Mus musculus chromosome 5, clone RP23-314A12, complete sequence
          Length = 189230

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   atcttcaaagccatgaaagg 427
             ||||||||||||||||||||
Sbjct: 17777 atcttcaaagccatgaaagg 17758
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>emb|AL391237.12| Human DNA sequence from clone RP13-125M24 on chromosome Xq23-25
             Contains part of the gene for a novel protein similar to
             zizimin1 (FLJ32122) and a retinoblastoma binding protein 8
             (RBBP8) pseugdogene, complete sequence
          Length = 58723

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 440   tttggaggtgatactggagatgca 463
             ||||||| ||||||||||||||||
Sbjct: 17962 tttggagatgatactggagatgca 17939
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>ref|XM_789771.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein KIAA1219
            (LOC590156), mRNA
          Length = 2289

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 412  tcaaagccatgaaagggtta 431
            ||||||||||||||||||||
Sbjct: 1031 tcaaagccatgaaagggtta 1050
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>gb|AC061709.25| Homo sapiens 12 BAC RP11-417O18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 208524

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   tggaggtgatactggagatg 461
             ||||||||||||||||||||
Sbjct: 31810 tggaggtgatactggagatg 31791
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>emb|BX511081.8| Zebrafish DNA sequence from clone DKEY-6B12 in linkage group 21, complete
              sequence
          Length = 210246

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 519    aagatattgcaaactcaaag 538
              ||||||||||||||||||||
Sbjct: 195197 aagatattgcaaactcaaag 195216
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>gb|AF230499.1| Oryza sativa subsp. japonica serine/threonine protein kinase (YK10)
           gene, partial cds
          Length = 532

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 466 tgaagcacatgaatggagat 485
           ||||||||||||||||||||
Sbjct: 320 tgaagcacatgaatggagat 301
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 466      tgaagcacatgaatggagat 485
                ||||||||||||||||||||
Sbjct: 17948661 tgaagcacatgaatggagat 17948680
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 258      agtatgacctgacaagaggg 277
                ||||||||||||||||||||
Sbjct: 20388886 agtatgacctgacaagaggg 20388867
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>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
             sequence
          Length = 152883

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   agtatgacctgacaagaggg 277
             ||||||||||||||||||||
Sbjct: 40157 agtatgacctgacaagaggg 40138
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>gb|AC004470.2| Homo sapiens X BAC GS1-433O24 (Genome Systems Human BAC Library)
             complete sequence
          Length = 206809

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 502   tggaattagaatttttgaagatat 525
             |||||||||||| |||||||||||
Sbjct: 87987 tggaattagaatctttgaagatat 87964
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>gb|AC127286.3| Mus musculus BAC clone RP23-340I4 from chromosome unknown, complete
             sequence
          Length = 190953

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 510   gaatttttgaagatattgcaaact 533
             ||||||||||||| ||||||||||
Sbjct: 74609 gaatttttgaagacattgcaaact 74586
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>dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           BAC clone:OJ1509_C06
          Length = 113436

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 466 tgaagcacatgaatggagat 485
           ||||||||||||||||||||
Sbjct: 315 tgaagcacatgaatggagat 334
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>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1118_B06
          Length = 106678

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 466   tgaagcacatgaatggagat 485
             ||||||||||||||||||||
Sbjct: 99480 tgaagcacatgaatggagat 99499
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>dbj|AK071360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090B05, full
            insert sequence
          Length = 2453

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 466  tgaagcacatgaatggagat 485
            ||||||||||||||||||||
Sbjct: 1661 tgaagcacatgaatggagat 1642
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>emb|BX539328.4| Mouse DNA sequence from clone RP23-108I21 on chromosome X, complete
              sequence
          Length = 113887

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 510    gaatttttgaagatattgcaaact 533
              ||||||||||||| ||||||||||
Sbjct: 102395 gaatttttgaagacattgcaaact 102418
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>gb|AC110537.19| Mus musculus chromosome 5, clone RP23-44A4, complete sequence
          Length = 208136

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    atcttcaaagccatgaaagg 427
              ||||||||||||||||||||
Sbjct: 170465 atcttcaaagccatgaaagg 170446
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>gb|AC149091.3| Mus musculus BAC clone RP23-49P22 from 7, complete sequence
          Length = 240997

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   atcttcaaagccatgaaagg 427
             ||||||||||||||||||||
Sbjct: 64773 atcttcaaagccatgaaagg 64792
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>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence
          Length = 236246

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    taaatggaattagaattttt 517
              ||||||||||||||||||||
Sbjct: 141736 taaatggaattagaattttt 141717
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>gb|AC167544.9| Mus musculus chromosome 7, clone RP24-255K20, complete sequence
          Length = 155048

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    atcttcaaagccatgaaagg 427
              ||||||||||||||||||||
Sbjct: 141057 atcttcaaagccatgaaagg 141076
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>emb|AL928575.7| Mouse DNA sequence from clone RP23-37A11 on chromosome 2, complete
              sequence
          Length = 167375

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 504    gaattagaatttttgaagatattg 527
              |||||||||| |||||||||||||
Sbjct: 149118 gaattagaatatttgaagatattg 149095
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>emb|AL671872.10| Mouse DNA sequence from clone RP23-151N17 on chromosome 4, complete
            sequence
          Length = 188386

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 440  tttggaggtgatactggaga 459
            ||||||||||||||||||||
Sbjct: 3956 tttggaggtgatactggaga 3937


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,613,129
Number of Sequences: 3902068
Number of extensions: 4613129
Number of successful extensions: 83559
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83334
Number of HSP's gapped (non-prelim): 223
length of query: 543
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 520
effective length of database: 17,143,297,704
effective search space: 8914514806080
effective search space used: 8914514806080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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