ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal34a15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ019628.1| Triticum aestivum alternative splicing regulator (RSZ38) mRNA, complete cds Length = 1255 Score = 884 bits (446), Expect = 0.0 Identities = 514/537 (95%), Gaps = 6/537 (1%) Strand = Plus / Plus Query: 30 cgtccgacctagggttctgcgccgccgcc------cggctcccgaggagatgcctcgtta 83 ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 7 cgtccgacctagggttctgcgccgccgccgccccgctgctcccgaggagatgcctcgtta 66 Query: 84 cgatgatcgttatggaaacgcacgcttgtatgttggtagattgtcctcccgtactcgttc 143 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 tgatgatcgttatggaaatgcacgcttgtatgttggtagattgtcctcccgtactcgttc 126 Query: 144 gcgcgacctagaatatcttttcagcaaatatggaagaatacgggaagtggaattgaagcg 203 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 gcgtgacctagaatatcttttcagcaaatatggaagaatacgggaagtggaattgaagcg 186 Query: 204 cgactatgcattcattgaattcagtgattctcgtgatgctgatgaagcccggtacaatct 263 |||||||||||||||||||| ||||||| |||||||||||||||| ||||| ||||| || Sbjct: 187 cgactatgcattcattgaatacagtgatcctcgtgatgctgatgaggcccgatacaacct 246 Query: 264 agatggcagggatgttgatgggagccgcattattgttgagtttgctaaaggggttccacg 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 agatggcagggatgttgatgggagccgcattattgttgagtttgctaaaggggttccacg 306 Query: 324 tggttctggtggttcacgagagcgtgaatatgtggggagagggcctcctccaggaacagg 383 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 307 tggttctggtggttcacgagaacgtgaatatgtgggaagagggcctcctccaggaacagg 366 Query: 384 ccgttgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactg 443 ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 367 ccgttgtttcaactgtggtattgatggtcattgggccagggactgcaaagctggtgactg 426 Query: 444 gaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaattgccagaatag 503 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 427 gaagaacaaatgctaccgctgtggagaaaggggccatattgaaagaaattgccagaatag 486 Query: 504 cccgaggagtctcaggcgtgagagaagctattcacggtccccatctccacgtcgtgg 560 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 cccgaggagtctcaggcgtgagagaagctattcacggtccccatctccacgtcgtgg 543
>gb|AY104051.1| Zea mays PCO093410 mRNA sequence Length = 1288 Score = 478 bits (241), Expect = e-131 Identities = 426/488 (87%), Gaps = 6/488 (1%) Strand = Plus / Plus Query: 73 atgcctcgttacgatgatcgttatggaaacgcacgcttgtatgttggtagattgtcctcc 132 ||||||||||| |||||||| |||| || |||||||||||||||| |||||| || | Sbjct: 120 atgcctcgttatgatgatcgccatgggaatacacgcttgtatgttggaagattggcccct 179 Query: 133 cgtactcgttcgcgcgacctagaatatcttttcagcaaatatggaagaatacgggaagtg 192 || || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 180 cgcacccgttcccgcgacctagaatatcttttcagcaaatatggaagaatacgtgaagtg 239 Query: 193 gaattgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatgaagcc 252 || |||||||| |||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 240 gagttgaagcgtgactatgcattcattgaattcagtgacccccgtgatgctgatgatgcg 299 Query: 253 cggtacaatctagatggcagggatgttgatgggagccgcattattgttgagtttgctaaa 312 | |||||| |||||||||||||| || ||||| ||||| ||||||||||| ||||||||| Sbjct: 300 cagtacaacctagatggcagggaagtcgatggaagccgtattattgttgaatttgctaaa 359 Query: 313 ggggttccacgtggttctggtggttcacgagagcgtgaatatgtggggagagggcctcct 372 || ||||| |||||||||||||||||| ||||| || |||| ||||| ||||| Sbjct: 360 ggagttcctcgtggttctggtggttca------cgtgagtacatgggaagaggacctcca 413 Query: 373 ccaggaacaggccgttgtttcaactgtggtatagatggtcattgggccagggattgcaag 432 ||||||||||| |||||||| |||||||| || |||||||| ||||| ||||| |||||| Sbjct: 414 ccaggaacaggtcgttgttttaactgtggaatggatggtcactgggcaagggactgcaag 473 Query: 433 gctggtgactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaat 492 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 474 gctggtgactggaagaacaaatgctaccgctgtggtgaatcgggccatatagagagaaat 533 Query: 493 tgccagaatagcccgaggagtctcaggcgtgagagaagctattcacggtccccatctcca 552 |||||||| || || |||| |||||||||||| | ||||||||||||||| ||||| ||| Sbjct: 534 tgccagaacagtccaaggaatctcaggcgtgataaaagctattcacggtctccatcccca 593 Query: 553 cgtcgtgg 560 ||| |||| Sbjct: 594 cgtggtgg 601
>dbj|AK073348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025D08, full insert sequence Length = 1306 Score = 464 bits (234), Expect = e-127 Identities = 430/495 (86%), Gaps = 9/495 (1%) Strand = Plus / Plus Query: 69 ggagatgcctcgttacgatgatcgttatggaaacgcacgcttgtatgttggtagattgtc 128 |||||||||||| || ||||||| |||||||| | |||||||||||||||||||| |||| Sbjct: 109 ggagatgcctcgctatgatgatcattatggaagcacacgcttgtatgttggtagactgtc 168 Query: 129 ctcccgtactcgttcgcgcgacctagaatatcttttcagcaaatatggaagaatacggga 188 || || |||||||| || |||||||||||||||||| ||| ||||||||||||||| || Sbjct: 169 ttcgcgcactcgttctcgtgacctagaatatcttttcggcagatatggaagaatacgtga 228 Query: 189 agtggaattgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatga 248 |||||| |||||||||||||| || || ||||||||||||||| | |||||||||||||| Sbjct: 229 agtggagttgaagcgcgactacgcgtttattgaattcagtgatccccgtgatgctgatga 288 Query: 249 agcccggtacaatctagatggcagggatgttgatgggagccgcattattgttgagtttgc 308 ||| ||||| || ||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 289 agcacggtataacctagatggcagggatgttgatggaagccgcattcttgttgagtttgc 348 Query: 309 taaaggggttccacgtgg---ttctggtggttcacgagagcgtgaatatgtggggagagg 365 |||||| ||||||||||| | ||||||||||| ||||||||| |||||||||| Sbjct: 349 taaaggagttccacgtggtgctactggtggttca------cgtgaatatatggggagagg 402 Query: 366 gcctcctccaggaacaggccgttgtttcaactgtggtatagatggtcattgggccaggga 425 ||||||||||||||||| || ||||| |||||||| || |||||||| ||||| || || Sbjct: 403 acctcctccaggaacaggtcgctgttttaactgtgggattgatggtcactgggcaagaga 462 Query: 426 ttgcaaggctggtgactggaagaacaaatgctaccgctgtggagaaagaggccatataga 485 ||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 463 ctgcaaggctggtgactggaagaacaaatgttaccgttgtggagaaagaggtcacataga 522 Query: 486 gagaaattgccagaatagcccgaggagtctcaggcgtgagagaagctattcacggtcccc 545 ||||| ||||| || || || || | ||||||||| |||||||| ||||| || ||||| Sbjct: 523 aagaaactgccaaaacagtccaagaaatctcaggcgagagagaagttattcgcgctcccc 582 Query: 546 atctccacgtcgtgg 560 ||| ||||| ||||| Sbjct: 583 atcgccacgccgtgg 597
>dbj|AK103897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150I04, full insert sequence Length = 1306 Score = 448 bits (226), Expect = e-123 Identities = 426/493 (86%), Gaps = 6/493 (1%) Strand = Plus / Plus Query: 68 aggagatgcctcgttacgatgatcgttatggaaacgcacgcttgtatgttggtagattgt 127 |||||||||| || || |||||||||||||||| | | |||||||||||||||||| ||| Sbjct: 65 aggagatgccgcgctatgatgatcgttatggaagcacgcgcttgtatgttggtagactgt 124 Query: 128 cctcccgtactcgttcgcgcgacctagaatatcttttcagcaaatatggaagaatacggg 187 | ||||| |||||||| || ||||||||||| | |||||||| ||||||||||||||| | Sbjct: 125 cttcccgcactcgttctcgtgacctagaataccatttcagcagatatggaagaatacgtg 184 Query: 188 aagtggaattgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatg 247 ||||||| |||||||||||||| ||||| ||||| ||||||||| | ||||||||||| | Sbjct: 185 aagtggagttgaagcgcgactacgcatttattgagttcagtgatccccgtgatgctgagg 244 Query: 248 aagcccggtacaatctagatggcagggatgttgatgggagccgcattattgttgagtttg 307 |||| |||||| || |||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 245 aagcaaggtacagccttgatggcagggatgttgatggaagccgcattcttgttgagtttg 304 Query: 308 ctaaaggggttccacgtggttctggtggttcacgagagcgtgaatatgtggggagagggc 367 |||||||||||||||||||| ||||||||||| ||||||||| |||||||||| | Sbjct: 305 ctaaaggggttccacgtggtcctggtggttca------cgtgaatatatggggagaggac 358 Query: 368 ctcctccaggaacaggccgttgtttcaactgtggtatagatggtcattgggccagggatt 427 ||||||| |||||||| || ||||| |||||||| || |||||||| ||||| || || | Sbjct: 359 ctcctcctggaacaggtcggtgttttaactgtgggattgatggtcactgggcaagagact 418 Query: 428 gcaaggctggtgactggaagaacaaatgctaccgctgtggagaaagaggccatatagaga 487 |||||||||||||||||||||||||||| ||||||||||| || ||||| || ||||| | Sbjct: 419 gcaaggctggtgactggaagaacaaatgttaccgctgtggggagagaggtcacatagaaa 478 Query: 488 gaaattgccagaatagcccgaggagtctcaggcgtgagagaagctattcacggtccccat 547 |||| || || || ||||| || | |||||||||||||||||| |||||| | || |||| Sbjct: 479 gaaactgtcaaaacagcccaagaaatctcaggcgtgagagaagttattcatgctctccat 538 Query: 548 ctccacgtcgtgg 560 | ||||| ||||| Sbjct: 539 cgccacgccgtgg 551
>gb|AY107211.1| Zea mays PCO136611 mRNA sequence Length = 1362 Score = 422 bits (213), Expect = e-115 Identities = 419/488 (85%), Gaps = 6/488 (1%) Strand = Plus / Plus Query: 73 atgcctcgttacgatgatcgttatggaaacgcacgcttgtatgttggtagattgtcctcc 132 |||||||| || |||||||| |||||| | | |||||||||||||| |||||| || || Sbjct: 101 atgcctcgctatgatgatcgctatggaggcacgcgcttgtatgttggcagattggccccc 160 Query: 133 cgtactcgttcgcgcgacctagaatatcttttcagcaaatatggaagaatacgggaagtg 192 ||||||||||| || || |||||||||| ||| ||||||||||||||||||| |||||| Sbjct: 161 cgtactcgttctcgtgatttagaatatctcttcggcaaatatggaagaatacgagaagtg 220 Query: 193 gaattgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatgaagcc 252 || |||||||||||||||||||| ||||| |||||||| ||||||||| |||||||| Sbjct: 221 gagttgaagcgcgactatgcatttattgagttcagtgaacatcgtgatgccgatgaagct 280 Query: 253 cggtacaatctagatggcagggatgttgatgggagccgcattattgttgagtttgctaaa 312 |||||| | ||||||||||||||||| ||||| || |||||| ||||||||||||||||| Sbjct: 281 cggtaccaactagatggcagggatgtcgatggaagtcgcattgttgttgagtttgctaaa 340 Query: 313 ggggttccacgtggttctggtggttcacgagagcgtgaatatgtggggagagggcctcct 372 ||||| ||||||||| | ||||| ||| ||||||||| |||| ||||| ||||| Sbjct: 341 ggggtcccacgtggtccaggtggctca------cgtgaatatatgggaagaggccctcca 394 Query: 373 ccaggaacaggccgttgtttcaactgtggtatagatggtcattgggccagggattgcaag 432 ||||| ||||| ||||||||||||||||| || |||||||| ||||| || || || ||| Sbjct: 395 ccaggcacaggtcgttgtttcaactgtggaatggatggtcactgggcaagagactgtaag 454 Query: 433 gctggtgactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaat 492 |||||||||||||| || ||||||||||| |||||||||||||| |||||||| |||||| Sbjct: 455 gctggtgactggaaaaataaatgctaccgttgtggagaaagagggcatatagaaagaaat 514 Query: 493 tgccagaatagcccgaggagtctcaggcgtgagagaagctattcacggtccccatctcca 552 |||||||| || || ||||| |||||||||| ||||| || ||||| |||||||||||| Sbjct: 515 tgccagaacagtcctaggagcgtcaggcgtgaaagaagttactcacgctccccatctcca 574 Query: 553 cgtcgtgg 560 || ||||| Sbjct: 575 cgccgtgg 582
>dbj|AK060437.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-D02, full insert sequence Length = 1152 Score = 341 bits (172), Expect = 1e-90 Identities = 330/383 (86%), Gaps = 6/383 (1%) Strand = Plus / Plus Query: 178 agaatacgggaagtggaattgaagcgcgactatgcattcattgaattcagtgattctcgt 237 |||||||| |||||||| |||||||||||||| ||||| ||||| ||||||||| | ||| Sbjct: 70 agaatacgtgaagtggagttgaagcgcgactacgcatttattgagttcagtgatccccgt 129 Query: 238 gatgctgatgaagcccggtacaatctagatggcagggatgttgatgggagccgcattatt 297 ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||| || Sbjct: 130 gatgctggggaagcaaggtacaaccttgatggcagggatgttgatggaagccgcattctt 189 Query: 298 gttgagtttgctaaaggggttccacgtggttctggtggttcacgagagcgtgaatatgtg 357 |||||||||||||||||||||||||||||| ||||||||||| ||||||||| || Sbjct: 190 gttgagtttgctaaaggggttccacgtggtcctggtggttca------cgtgaatatatg 243 Query: 358 gggagagggcctcctccaggaacaggccgttgtttcaactgtggtatagatggtcattgg 417 |||||||| |||||||| |||||||| || ||||| |||||||| || |||||||| ||| Sbjct: 244 gggagaggacctcctcctggaacaggtcggtgttttaactgtgggattgatggtcactgg 303 Query: 418 gccagggattgcaaggctggtgactggaagaacaaatgctaccgctgtggagaaagaggc 477 || || || ||||||||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 304 gcaagagactgcaaggctggtgactggaagaacaaatgttaccgctgtggggagagaggt 363 Query: 478 catatagagagaaattgccagaatagcccgaggagtctcaggcgtgagagaagctattca 537 || ||||| ||||| || || || ||||| || | |||||||||||||||||| |||||| Sbjct: 364 cacatagaaagaaactgtcaaaacagcccaagaaatctcaggcgtgagagaagttattca 423 Query: 538 cggtccccatctccacgtcgtgg 560 | || ||||| ||||| ||||| Sbjct: 424 tgctctccatcgccacgccgtgg 446
>ref|XM_470660.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1170 Score = 321 bits (162), Expect = 1e-84 Identities = 283/323 (87%), Gaps = 9/323 (2%) Strand = Plus / Plus Query: 178 agaatacgggaagtggaattgaagcgcgactatgcattcattgaattcagtgattctcgt 237 |||||||| |||||||| |||||||||||||| || || ||||||||||||||| | ||| Sbjct: 379 agaatacgtgaagtggagttgaagcgcgactacgcgtttattgaattcagtgatccccgt 438 Query: 238 gatgctgatgaagcccggtacaatctagatggcagggatgttgatgggagccgcattatt 297 |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||| || Sbjct: 439 gatgctgatgaagcgcggtataacctagatggcagggatgttgatggaagccgcattctt 498 Query: 298 gttgagtttgctaaaggggttccacgtgg---ttctggtggttcacgagagcgtgaatat 354 ||||||||||||||||| ||||||||||| | ||||||||||| ||||||||| Sbjct: 499 gttgagtttgctaaaggagttccacgtggtgctgctggtggttca------cgtgaatat 552 Query: 355 gtggggagagggcctcctccaggaacaggccgttgtttcaactgtggtatagatggtcat 414 |||||||||| ||||||||||||||||| || ||||| |||||||| || |||||||| Sbjct: 553 atggggagaggacctcctccaggaacaggtcgctgttttaactgtgggattgatggtcac 612 Query: 415 tgggccagggattgcaaggctggtgactggaagaacaaatgctaccgctgtggagaaaga 474 ||||| || || ||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 613 tgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgtggagaaaga 672 Query: 475 ggccatatagagagaaattgcca 497 || || ||||| ||||| ||||| Sbjct: 673 ggtcacatagaaagaaactgcca 695 Score = 119 bits (60), Expect = 1e-23 Identities = 99/112 (88%) Strand = Plus / Plus Query: 68 aggagatgcctcgttacgatgatcgttatggaaacgcacgcttgtatgttggtagattgt 127 ||||||||||||| || ||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 131 aggagatgcctcgctatgatgatcattatggaagcacacgcttgtatgttggtagactgt 190 Query: 128 cctcccgtactcgttcgcgcgacctagaatatcttttcagcaaatatggaag 179 | || || |||||||| || |||||||||||||||||| ||| ||||||||| Sbjct: 191 cttcgcgcactcgttctcgtgacctagaatatcttttcggcagatatggaag 242
>gb|BT017169.1| Zea mays clone EL01N0368H11.c mRNA sequence Length = 1011 Score = 321 bits (162), Expect = 1e-84 Identities = 296/341 (86%), Gaps = 6/341 (1%) Strand = Plus / Plus Query: 220 gaattcagtgattctcgtgatgctgatgaagcccggtacaatctagatggcagggatgtt 279 ||||||||||| | |||||||||||||| || | |||||| |||||||||||||| || Sbjct: 8 gaattcagtgacccccgtgatgctgatgatgcgcagtacaacctagatggcagggaagtc 67 Query: 280 gatgggagccgcattattgttgagtttgctaaaggggttccacgtggttctggtggttca 339 ||||| ||||| ||||||||||| ||||||||||| ||||| |||||||||||||||||| Sbjct: 68 gatggaagccgtattattgttgaatttgctaaaggagttcctcgtggttctggtggttca 127 Query: 340 cgagagcgtgaatatgtggggagagggcctcctccaggaacaggccgttgtttcaactgt 399 || ||| || |||| ||||| ||||| ||||||||||| |||||||| |||||| Sbjct: 128 cgtgag------tacatgggaagaggacctccaccaggaacaggtcgttgttttaactgt 181 Query: 400 ggtatagatggtcattgggccagggattgcaaggctggtgactggaagaacaaatgctac 459 || || |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 182 ggaatggatggtcactgggcaagggactgcaaggctggtgactggaagaacaaatgctac 241 Query: 460 cgctgtggagaaagaggccatatagagagaaattgccagaatagcccgaggagtctcagg 519 |||||||| ||| |||||||||||||||||||||||||| || || |||| ||||||| Sbjct: 242 cgctgtggtgaatcgggccatatagagagaaattgccagaacagtccaaggaatctcagg 301 Query: 520 cgtgagagaagctattcacggtccccatctccacgtcgtgg 560 ||||||| ||||||||||||||| ||||| |||||| |||| Sbjct: 302 cgtgagaaaagctattcacggtctccatccccacgtggtgg 342
>gb|AY107198.1| Zea mays PCO093409 mRNA sequence Length = 1566 Score = 280 bits (141), Expect = 5e-72 Identities = 228/257 (88%) Strand = Plus / Plus Query: 85 gatgatcgttatggaaacgcacgcttgtatgttggtagattgtcctcccgtactcgttcg 144 |||||||| ||||| || |||||||||||||||| |||||||| |||| || ||||| Sbjct: 359 gatgatcgctatgggaatacacgcttgtatgttggaagattgtctccccgcacccgttct 418 Query: 145 cgcgacctagaatatcttttcagcaaatatggaagaatacgggaagtggaattgaagcgc 204 || ||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||| Sbjct: 419 cgtgacctagaataccttttcagcaaatatgggagaattcgagaagtggagttgaagcgt 478 Query: 205 gactatgcattcattgaattcagtgattctcgtgatgctgatgaagcccggtacaatcta 264 |||||||||||||||||||||||||| | |||||||||||||| || | |||||| ||| Sbjct: 479 gactatgcattcattgaattcagtgacccccgtgatgctgatgatgcacagtacaaccta 538 Query: 265 gatggcagggatgttgatgggagccgcattattgttgagtttgctaaaggggttccacgt 324 ||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct: 539 gatggcagggacgtcgatggaagccgcattattgttgaatttgctaaaggggttcctcgt 598 Query: 325 ggttctggtggttcacg 341 ||||||||||||||||| Sbjct: 599 ggttctggtggttcacg 615 Score = 202 bits (102), Expect = 9e-49 Identities = 171/194 (88%) Strand = Plus / Plus Query: 361 agagggcctcctccaggaacaggccgttgtttcaactgtggtatagatggtcattgggcc 420 ||||| ||||| |||||||||||||||||||| |||||||| | |||||||| ||||| Sbjct: 629 agaggacctccaccaggaacaggccgttgttttaactgtggagttgatggtcactgggca 688 Query: 421 agggattgcaaggctggtgactggaagaacaaatgctaccgctgtggagaaagaggccat 480 || || || ||||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 689 agagactgtcaggctggtgactggaagaacaaatgctaccgttgtggcgaaaggggccat 748 Query: 481 atagagagaaattgccagaatagcccgaggagtctcaggcgtgagagaagctattcacgg 540 ||||| |||||||||||||| || || |||| ||||||||||||||||||||||||||| Sbjct: 749 atagaaagaaattgccagaacagtccaaggaacctcaggcgtgagagaagctattcacgg 808 Query: 541 tccccatctccacg 554 || ||||| ||||| Sbjct: 809 tctccatccccacg 822
>gb|BT016393.1| Zea mays clone Contig226 mRNA sequence Length = 1003 Score = 202 bits (102), Expect = 9e-49 Identities = 171/194 (88%) Strand = Plus / Plus Query: 361 agagggcctcctccaggaacaggccgttgtttcaactgtggtatagatggtcattgggcc 420 ||||| ||||| |||||||||||||||||||| |||||||| | |||||||| ||||| Sbjct: 75 agaggacctccaccaggaacaggccgttgttttaactgtggagttgatggtcactgggca 134 Query: 421 agggattgcaaggctggtgactggaagaacaaatgctaccgctgtggagaaagaggccat 480 || || || ||||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 135 agagactgtcaggctggtgactggaagaacaaatgctaccgttgtggcgaaaggggccat 194 Query: 481 atagagagaaattgccagaatagcccgaggagtctcaggcgtgagagaagctattcacgg 540 ||||| |||||||||||||| || || |||| ||||||||||||||||||||||||||| Sbjct: 195 atagaaagaaattgccagaacagtccaaggaacctcaggcgtgagagaagctattcacgg 254 Query: 541 tccccatctccacg 554 || ||||| ||||| Sbjct: 255 tctccatccccacg 268 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 287 gccgcattattgttgagtttgctaaaggggttccacgtggttctggtggttcacg 341 |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 8 gccgcattattgttgaatttgctaaaggggttcctcgtggttctggtggttcacg 62
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 346 cgtgaatatgtggggagagggcctcctccaggaacaggccgttgtttcaactgtggtata 405 ||||||||| |||||||||| ||||||||||||||||| || ||||| |||||||| || Sbjct: 9825954 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 9825895 Query: 406 gatggtcattgggccagggattgcaaggctggtgactggaagaacaaatgctaccgctgt 465 |||||||| ||||| || || ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 9825894 gatggtcactgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgt 9825835 Query: 466 ggagaaagaggccatatagagagaaattgcca 497 ||||||||||| || ||||| ||||| ||||| Sbjct: 9825834 ggagaaagaggtcacatagaaagaaactgcca 9825803 Score = 133 bits (67), Expect = 7e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 220 gaattcagtgattctcgtgatgctgatgaagcccggtacaatctagatggcagggatgtt 279 |||||||||||| | ||||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 9826214 gaattcagtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgtt 9826155 Query: 280 gatgggagccgcattattgttgagtttgctaaagg 314 ||||| ||||||||| ||||||||||||||||||| Sbjct: 9826154 gatggaagccgcattcttgttgagtttgctaaagg 9826120 Score = 119 bits (60), Expect = 1e-23 Identities = 99/112 (88%) Strand = Plus / Minus Query: 68 aggagatgcctcgttacgatgatcgttatggaaacgcacgcttgtatgttggtagattgt 127 ||||||||||||| || ||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 9827196 aggagatgcctcgctatgatgatcattatggaagcacacgcttgtatgttggtagactgt 9827137 Query: 128 cctcccgtactcgttcgcgcgacctagaatatcttttcagcaaatatggaag 179 | || || |||||||| || |||||||||||||||||| ||| ||||||||| Sbjct: 9827136 cttcgcgcactcgttctcgtgacctagaatatcttttcggcagatatggaag 9827085 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 178 agaatacgggaagtggaattgaagcgcgacta 209 |||||||| |||||||| |||||||||||||| Sbjct: 9826374 agaatacgtgaagtggagttgaagcgcgacta 9826343
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Minus Query: 346 cgtgaatatgtggggagagggcctcctccaggaacaggccgttgtttcaactgtggtata 405 ||||||||| |||||||||| ||||||||||||||||| || ||||| |||||||| || Sbjct: 9824075 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 9824016 Query: 406 gatggtcattgggccagggattgcaaggctggtgactggaagaacaaatgctaccgctgt 465 |||||||| ||||| || || ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 9824015 gatggtcactgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgt 9823956 Query: 466 ggagaaagaggccatatagagagaaattgcca 497 ||||||||||| || ||||| ||||| ||||| Sbjct: 9823955 ggagaaagaggtcacatagaaagaaactgcca 9823924 Score = 133 bits (67), Expect = 7e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 220 gaattcagtgattctcgtgatgctgatgaagcccggtacaatctagatggcagggatgtt 279 |||||||||||| | ||||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 9824335 gaattcagtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgtt 9824276 Query: 280 gatgggagccgcattattgttgagtttgctaaagg 314 ||||| ||||||||| ||||||||||||||||||| Sbjct: 9824275 gatggaagccgcattcttgttgagtttgctaaagg 9824241 Score = 119 bits (60), Expect = 1e-23 Identities = 99/112 (88%) Strand = Plus / Minus Query: 68 aggagatgcctcgttacgatgatcgttatggaaacgcacgcttgtatgttggtagattgt 127 ||||||||||||| || ||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 9825317 aggagatgcctcgctatgatgatcattatggaagcacacgcttgtatgttggtagactgt 9825258 Query: 128 cctcccgtactcgttcgcgcgacctagaatatcttttcagcaaatatggaag 179 | || || |||||||| || |||||||||||||||||| ||| ||||||||| Sbjct: 9825257 cttcgcgcactcgttctcgtgacctagaatatcttttcggcagatatggaag 9825206 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 178 agaatacgggaagtggaattgaagcgcgacta 209 |||||||| |||||||| |||||||||||||| Sbjct: 9824495 agaatacgtgaagtggagttgaagcgcgacta 9824464
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 167 bits (84), Expect = 5e-38 Identities = 135/152 (88%) Strand = Plus / Plus Query: 346 cgtgaatatgtggggagagggcctcctccaggaacaggccgttgtttcaactgtggtata 405 ||||||||| |||||||||| ||||||||||||||||| || ||||| |||||||| || Sbjct: 48543 cgtgaatatatggggagaggacctcctccaggaacaggtcgctgttttaactgtgggatt 48602 Query: 406 gatggtcattgggccagggattgcaaggctggtgactggaagaacaaatgctaccgctgt 465 |||||||| ||||| || || ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 48603 gatggtcactgggcaagagactgcaaggctggtgactggaagaacaaatgttaccgttgt 48662 Query: 466 ggagaaagaggccatatagagagaaattgcca 497 ||||||||||| || ||||| ||||| ||||| Sbjct: 48663 ggagaaagaggtcacatagaaagaaactgcca 48694 Score = 133 bits (67), Expect = 7e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 220 gaattcagtgattctcgtgatgctgatgaagcccggtacaatctagatggcagggatgtt 279 |||||||||||| | ||||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 48283 gaattcagtgatccccgtgatgctgatgaagcgcggtataacctagatggcagggatgtt 48342 Query: 280 gatgggagccgcattattgttgagtttgctaaagg 314 ||||| ||||||||| ||||||||||||||||||| Sbjct: 48343 gatggaagccgcattcttgttgagtttgctaaagg 48377 Score = 119 bits (60), Expect = 1e-23 Identities = 99/112 (88%) Strand = Plus / Plus Query: 68 aggagatgcctcgttacgatgatcgttatggaaacgcacgcttgtatgttggtagattgt 127 ||||||||||||| || ||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 47301 aggagatgcctcgctatgatgatcattatggaagcacacgcttgtatgttggtagactgt 47360 Query: 128 cctcccgtactcgttcgcgcgacctagaatatcttttcagcaaatatggaag 179 | || || |||||||| || |||||||||||||||||| ||| ||||||||| Sbjct: 47361 cttcgcgcactcgttctcgtgacctagaatatcttttcggcagatatggaag 47412 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 178 agaatacgggaagtggaattgaagcgcgacta 209 |||||||| |||||||| |||||||||||||| Sbjct: 48123 agaatacgtgaagtggagttgaagcgcgacta 48154
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 155 bits (78), Expect = 2e-34 Identities = 152/177 (85%), Gaps = 6/177 (3%) Strand = Plus / Minus Query: 315 ggttccacgtggttctggtggttcacgagagcgtgaatatgtggggagagggcctcctcc 374 ||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 986695 ggttccacgtggtcctggtggttcacg------tgaatatatggggagaggacctcctcc 986642 Query: 375 aggaacaggccgttgtttcaactgtggtatagatggtcattgggccagggattgcaaggc 434 |||||||| || ||||| |||||||| || |||||||| ||||| || || |||||||| Sbjct: 986641 tggaacaggtcggtgttttaactgtgggattgatggtcactgggcaagagactgcaaggc 986582 Query: 435 tggtgactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||||||||||||| ||||||||||| || ||||| || ||||| ||||| Sbjct: 986581 tggtgactggaagaacaaatgttaccgctgtggggagagaggtcacatagaaagaaa 986525 Score = 117 bits (59), Expect = 4e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 223 ttcagtgattctcgtgatgctgatgaagcccggtacaatctagatggcagggatgttgat 282 ||||||||| | ||||||||||| ||||| ||||||| || |||||||||||||||||| Sbjct: 986916 ttcagtgatccccgtgatgctgaggaagcaaggtacaaccttgatggcagggatgttgat 986857 Query: 283 gggagccgcattattgttgagtttgctaaaggggt 317 || ||||||||| |||||||||||||||||||||| Sbjct: 986856 ggaagccgcattcttgttgagtttgctaaaggggt 986822 Score = 111 bits (56), Expect = 2e-21 Identities = 98/112 (87%) Strand = Plus / Minus Query: 68 aggagatgcctcgttacgatgatcgttatggaaacgcacgcttgtatgttggtagattgt 127 |||||||||| || || |||||||||||||||| | | |||||||||||||||||| ||| Sbjct: 987862 aggagatgccgcgctatgatgatcgttatggaagcacgcgcttgtatgttggtagactgt 987803 Query: 128 cctcccgtactcgttcgcgcgacctagaatatcttttcagcaaatatggaag 179 | ||||| |||||||| || ||||||||||| | |||||||| ||||||||| Sbjct: 987802 cttcccgcactcgttctcgtgacctagaataccatttcagcagatatggaag 987751 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 178 agaatacgggaagtggaattgaagcgcgactatgcattcattg 220 |||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 987061 agaatacgtgaagtggagttgaagcgcgactacgcatttattg 987019 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 515 tcaggcgtgagagaagctattcacggtccccatctccacgtcgtgg 560 |||||||||||||||| |||||| | || ||||| ||||| ||||| Sbjct: 986389 tcaggcgtgagagaagttattcatgctctccatcgccacgccgtgg 986344
>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04 Length = 175439 Score = 155 bits (78), Expect = 2e-34 Identities = 152/177 (85%), Gaps = 6/177 (3%) Strand = Plus / Minus Query: 315 ggttccacgtggttctggtggttcacgagagcgtgaatatgtggggagagggcctcctcc 374 ||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 77092 ggttccacgtggtcctggtggttcacg------tgaatatatggggagaggacctcctcc 77039 Query: 375 aggaacaggccgttgtttcaactgtggtatagatggtcattgggccagggattgcaaggc 434 |||||||| || ||||| |||||||| || |||||||| ||||| || || |||||||| Sbjct: 77038 tggaacaggtcggtgttttaactgtgggattgatggtcactgggcaagagactgcaaggc 76979 Query: 435 tggtgactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||||||||||||| ||||||||||| || ||||| || ||||| ||||| Sbjct: 76978 tggtgactggaagaacaaatgttaccgctgtggggagagaggtcacatagaaagaaa 76922 Score = 117 bits (59), Expect = 4e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 223 ttcagtgattctcgtgatgctgatgaagcccggtacaatctagatggcagggatgttgat 282 ||||||||| | ||||||||||| ||||| ||||||| || |||||||||||||||||| Sbjct: 77313 ttcagtgatccccgtgatgctgaggaagcaaggtacaaccttgatggcagggatgttgat 77254 Query: 283 gggagccgcattattgttgagtttgctaaaggggt 317 || ||||||||| |||||||||||||||||||||| Sbjct: 77253 ggaagccgcattcttgttgagtttgctaaaggggt 77219 Score = 111 bits (56), Expect = 2e-21 Identities = 98/112 (87%) Strand = Plus / Minus Query: 68 aggagatgcctcgttacgatgatcgttatggaaacgcacgcttgtatgttggtagattgt 127 |||||||||| || || |||||||||||||||| | | |||||||||||||||||| ||| Sbjct: 78259 aggagatgccgcgctatgatgatcgttatggaagcacgcgcttgtatgttggtagactgt 78200 Query: 128 cctcccgtactcgttcgcgcgacctagaatatcttttcagcaaatatggaag 179 | ||||| |||||||| || ||||||||||| | |||||||| ||||||||| Sbjct: 78199 cttcccgcactcgttctcgtgacctagaataccatttcagcagatatggaag 78148 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 178 agaatacgggaagtggaattgaagcgcgactatgcattcattg 220 |||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 77458 agaatacgtgaagtggagttgaagcgcgactacgcatttattg 77416 Score = 44.1 bits (22), Expect = 0.49 Identities = 40/46 (86%) Strand = Plus / Minus Query: 515 tcaggcgtgagagaagctattcacggtccccatctccacgtcgtgg 560 |||||||||||||||| |||||| | || ||||| ||||| ||||| Sbjct: 76786 tcaggcgtgagagaagttattcatgctctccatcgccacgccgtgg 76741
>ref|XM_550191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1332 Score = 145 bits (73), Expect = 2e-31 Identities = 291/364 (79%), Gaps = 6/364 (1%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatgaagcccggt 256 |||||| ||| | |||||| ||||||| |||||| |||| ||||||||||| || ||| Sbjct: 269 tgaagcacgagtttgcatttgttgaatttagtgatgctcgggatgctgatgaggcaaggt 328 Query: 257 acaatctagatggcagggatgttgatgggagccgcattattgttgagtttgctaaagggg 316 |||| || ||||| |||| ||||||| |||||||| |||||||||||||||||||||| Sbjct: 329 acaacctggatggtcgggactttgatggaagccgcatgattgttgagtttgctaaagggg 388 Query: 317 ttccacgtggttctggtggttcacgagagcgtgaatatgtggggagagggcctcctccag 376 |||||||||| |||| || ||| ||||||||| |||| ||||| || || || | Sbjct: 389 ttccacgtggccctggaggatca------cgtgaatatatgggcagaggaccaccacctg 442 Query: 377 gaacaggccgttgtttcaactgtggtatagatggtcattgggccagggattgcaaggctg 436 | | ||||| || || |||||||| || ||||| || |||||| | || ||||| |||| Sbjct: 443 gttctggccgctgctttaactgtgggattgatgggcactgggcccgtgactgcaaagctg 502 Query: 437 gtgactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaattgcc 496 | |||||||| |||| |||||| || |||||||| || ||||||||||| || | |||| Sbjct: 503 gagactggaaaaacagatgctatcggtgtggagacaggggccatatagaaagggactgcc 562 Query: 497 agaatagcccgaggagtctcaggcgtgagagaagctattcacggtccccatctccacgtc 556 ||| ||||| | || ||||| ||||| |||||||| ||| | |||||||| || |||| Sbjct: 563 ggaacagccctaagaatctcaagcgtggaagaagctactcaagatccccatcccctcgtc 622 Query: 557 gtgg 560 |||| Sbjct: 623 gtgg 626
>dbj|AK071635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100L15, full insert sequence Length = 1377 Score = 145 bits (73), Expect = 2e-31 Identities = 291/364 (79%), Gaps = 6/364 (1%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatgaagcccggt 256 |||||| ||| | |||||| ||||||| |||||| |||| ||||||||||| || ||| Sbjct: 314 tgaagcacgagtttgcatttgttgaatttagtgatgctcgggatgctgatgaggcaaggt 373 Query: 257 acaatctagatggcagggatgttgatgggagccgcattattgttgagtttgctaaagggg 316 |||| || ||||| |||| ||||||| |||||||| |||||||||||||||||||||| Sbjct: 374 acaacctggatggtcgggactttgatggaagccgcatgattgttgagtttgctaaagggg 433 Query: 317 ttccacgtggttctggtggttcacgagagcgtgaatatgtggggagagggcctcctccag 376 |||||||||| |||| || ||| ||||||||| |||| ||||| || || || | Sbjct: 434 ttccacgtggccctggaggatca------cgtgaatatatgggcagaggaccaccacctg 487 Query: 377 gaacaggccgttgtttcaactgtggtatagatggtcattgggccagggattgcaaggctg 436 | | ||||| || || |||||||| || ||||| || |||||| | || ||||| |||| Sbjct: 488 gttctggccgctgctttaactgtgggattgatgggcactgggcccgtgactgcaaagctg 547 Query: 437 gtgactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaattgcc 496 | |||||||| |||| |||||| || |||||||| || |||||||||||||| | |||| Sbjct: 548 gagactggaaaaacagatgctatcggtgtggagacaggggccatatagagagggactgcc 607 Query: 497 agaatagcccgaggagtctcaggcgtgagagaagctattcacggtccccatctccacgtc 556 ||| ||||| | || ||||| ||||| ||||||| ||| | |||||||| || |||| Sbjct: 608 ggaacagccctaagaatctcaagcgtggaagaagctgctcaagatccccatcccctcgtc 667 Query: 557 gtgg 560 |||| Sbjct: 668 gtgg 671
>dbj|AK060171.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F07, full insert sequence Length = 1332 Score = 145 bits (73), Expect = 2e-31 Identities = 291/364 (79%), Gaps = 6/364 (1%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatgaagcccggt 256 |||||| ||| | |||||| ||||||| |||||| |||| ||||||||||| || ||| Sbjct: 269 tgaagcacgagtttgcatttgttgaatttagtgatgctcgggatgctgatgaggcaaggt 328 Query: 257 acaatctagatggcagggatgttgatgggagccgcattattgttgagtttgctaaagggg 316 |||| || ||||| |||| ||||||| |||||||| |||||||||||||||||||||| Sbjct: 329 acaacctggatggtcgggactttgatggaagccgcatgattgttgagtttgctaaagggg 388 Query: 317 ttccacgtggttctggtggttcacgagagcgtgaatatgtggggagagggcctcctccag 376 |||||||||| |||| || ||| ||||||||| |||| ||||| || || || | Sbjct: 389 ttccacgtggccctggaggatca------cgtgaatatatgggcagaggaccaccacctg 442 Query: 377 gaacaggccgttgtttcaactgtggtatagatggtcattgggccagggattgcaaggctg 436 | | ||||| || || |||||||| || ||||| || |||||| | || ||||| |||| Sbjct: 443 gttctggccgctgctttaactgtgggattgatgggcactgggcccgtgactgcaaagctg 502 Query: 437 gtgactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaattgcc 496 | |||||||| |||| |||||| || |||||||| || ||||||||||| || | |||| Sbjct: 503 gagactggaaaaacagatgctatcggtgtggagacaggggccatatagaaagggactgcc 562 Query: 497 agaatagcccgaggagtctcaggcgtgagagaagctattcacggtccccatctccacgtc 556 ||| ||||| | || ||||| ||||| |||||||| ||| | |||||||| || |||| Sbjct: 563 ggaacagccctaagaatctcaagcgtggaagaagctactcaagatccccatcccctcgtc 622 Query: 557 gtgg 560 |||| Sbjct: 623 gtgg 626
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 220 gaattcagtgattctcgtgatgctgatgaagcccggtacaatctagatggcagggatgtt 279 ||||| |||||| |||| ||||||||||| || ||||||| || ||||| |||| || Sbjct: 2986893 gaatttagtgatgctcgggatgctgatgaggcaaggtacaacctggatggtcgggacttt 2986834 Query: 280 gatgggagccgcattattgttgagtttgctaaaggggt 317 ||||| |||||||| ||||||||||||||||||||||| Sbjct: 2986833 gatggaagccgcatgattgttgagtttgctaaaggggt 2986796 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 394 aactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaagaacaaa 453 |||||||| || ||||| || |||||| | || ||||| ||||| |||||||| |||| | Sbjct: 2986596 aactgtgggattgatgggcactgggcccgtgactgcaaagctggagactggaaaaacaga 2986537 Query: 454 tgctaccgctgtggagaaagaggccatataga 485 ||||| || |||||||| || ||||||||||| Sbjct: 2986536 tgctatcggtgtggagacaggggccatataga 2986505 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ccccgccgccgctccgtccg 35 |||||||||||||||||||| Sbjct: 1741854 ccccgccgccgctccgtccg 1741873
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 220 gaattcagtgattctcgtgatgctgatgaagcccggtacaatctagatggcagggatgtt 279 ||||| |||||| |||| ||||||||||| || ||||||| || ||||| |||| || Sbjct: 68410 gaatttagtgatgctcgggatgctgatgaggcaaggtacaacctggatggtcgggacttt 68351 Query: 280 gatgggagccgcattattgttgagtttgctaaaggggt 317 ||||| |||||||| ||||||||||||||||||||||| Sbjct: 68350 gatggaagccgcatgattgttgagtttgctaaaggggt 68313 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 394 aactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaagaacaaa 453 |||||||| || ||||| || |||||| | || ||||| ||||| |||||||| |||| | Sbjct: 68113 aactgtgggattgatgggcactgggcccgtgactgcaaagctggagactggaaaaacaga 68054 Query: 454 tgctaccgctgtggagaaagaggccatataga 485 ||||| || |||||||| || ||||||||||| Sbjct: 68053 tgctatcggtgtggagacaggggccatataga 68022
>gb|BT019123.1| Zea mays clone Contig737.F mRNA sequence Length = 724 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 482 tagagagaaattgccagaatagcccgaggagtctcaggcgtgagagaagctattcacggt 541 |||| |||||||||||||| || || |||| |||||||||||||||||||||||||||| Sbjct: 1 tagaaagaaattgccagaacagtccaaggaacctcaggcgtgagagaagctattcacggt 60 Query: 542 ccccatctccacg 554 | ||||| ||||| Sbjct: 61 ctccatccccacg 73
>ref|NM_201891.1| Arabidopsis thaliana RSZ33; nucleic acid binding AT2G37340 (RSZ33) transcript variant AT2G37340.3 mRNA, complete cds Length = 1369 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 572 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 631 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 632 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 675 Score = 40.1 bits (20), Expect = 7.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatga 248 ||||||| || ||||| ||| ||||||| ||||| | |||||||||||||| Sbjct: 396 tgaagcgagattatgctttcgttgaatttggtgatccccgtgatgctgatga 447
>ref|NM_179949.2| Arabidopsis thaliana RSZ33; nucleic acid binding AT2G37340 (RSZ33) transcript variant AT2G37340.1 mRNA, complete cds Length = 1162 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 365 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 424 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 425 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 468 Score = 44.1 bits (22), Expect = 0.49 Identities = 73/90 (81%) Strand = Plus / Plus Query: 159 tcttttcagcaaatatggaagaatacgggaagtggaattgaagcgcgactatgcattcat 218 |||||| |||| ||| |||||| | || || ||||| ||||||| || ||||| ||| | Sbjct: 151 tctttttagcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgt 210 Query: 219 tgaattcagtgattctcgtgatgctgatga 248 |||||| ||||| | |||||||||||||| Sbjct: 211 tgaatttggtgatccccgtgatgctgatga 240
>ref|NM_201890.1| Arabidopsis thaliana RSZ33; nucleic acid binding AT2G37340 (RSZ33) transcript variant AT2G37340.2 mRNA, complete cds Length = 1306 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 509 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 568 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 569 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 612
>emb|AJ293801.1|ATH293801 Arabidopsis thaliana mRNA for splicing factor RSZ33 Length = 1140 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 367 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 426 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 427 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 470 Score = 44.1 bits (22), Expect = 0.49 Identities = 73/90 (81%) Strand = Plus / Plus Query: 159 tcttttcagcaaatatggaagaatacgggaagtggaattgaagcgcgactatgcattcat 218 |||||| |||| ||| |||||| | || || ||||| ||||||| || ||||| ||| | Sbjct: 153 tctttttagcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgt 212 Query: 219 tgaattcagtgattctcgtgatgctgatga 248 |||||| ||||| | |||||||||||||| Sbjct: 213 tgaatttggtgatccccgtgatgctgatga 242
>gb|AY114563.1| Arabidopsis thaliana unknown protein (At2g37340) mRNA, complete cds Length = 1039 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 301 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 360 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 361 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 404 Score = 44.1 bits (22), Expect = 0.49 Identities = 73/90 (81%) Strand = Plus / Plus Query: 159 tcttttcagcaaatatggaagaatacgggaagtggaattgaagcgcgactatgcattcat 218 |||||| |||| ||| |||||| | || || ||||| ||||||| || ||||| ||| | Sbjct: 87 tctttttagcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgt 146 Query: 219 tgaattcagtgattctcgtgatgctgatga 248 |||||| ||||| | |||||||||||||| Sbjct: 147 tgaatttggtgatccccgtgatgctgatga 176
>gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence Length = 119001 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 40376 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 40317 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 40316 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 40273
>gb|AY072315.1| Arabidopsis thaliana unknown protein (At2g37340) mRNA, complete cds Length = 1137 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 363 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 422 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 423 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 466 Score = 44.1 bits (22), Expect = 0.49 Identities = 73/90 (81%) Strand = Plus / Plus Query: 159 tcttttcagcaaatatggaagaatacgggaagtggaattgaagcgcgactatgcattcat 218 |||||| |||| ||| |||||| | || || ||||| ||||||| || ||||| ||| | Sbjct: 149 tctttttagcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgt 208 Query: 219 tgaattcagtgattctcgtgatgctgatga 248 |||||| ||||| | |||||||||||||| Sbjct: 209 tgaatttggtgatccccgtgatgctgatga 238
>emb|BX842463.1|CNS0A9GQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS58ZG03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1317 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 565 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 624 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 625 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 668 Score = 40.1 bits (20), Expect = 7.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatga 248 ||||||| || ||||| ||| ||||||| ||||| | |||||||||||||| Sbjct: 389 tgaagcgagattatgctttcgttgaatttggtgatccccgtgatgctgatga 440
>dbj|AK176666.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-20-J02 Length = 1149 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 366 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 425 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 426 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 469
>dbj|AK176551.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-07-D13 Length = 1108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 370 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 429 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 430 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 473 Score = 44.1 bits (22), Expect = 0.49 Identities = 73/90 (81%) Strand = Plus / Plus Query: 159 tcttttcagcaaatatggaagaatacgggaagtggaattgaagcgcgactatgcattcat 218 |||||| |||| ||| |||||| | || || ||||| ||||||| || ||||| ||| | Sbjct: 156 tctttttagcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgt 215 Query: 219 tgaattcagtgattctcgtgatgctgatga 248 |||||| ||||| | |||||||||||||| Sbjct: 216 tgaatttggtgatccccgtgatgctgatga 245
>emb|BX842467.1|CNS0A9JT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1232 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| || || ||||||||| Sbjct: 509 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacagcaggggactggaag 568 Query: 448 aacaaatgctaccgctgtggagaaagagg 476 ||||| || ||||| |||||||| ||||| Sbjct: 569 aacaagtgttaccgttgtggagagagagg 597
>emb|BX842469.1|CNS0A9NV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZF04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1091 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| ||||||||| |||||||||||||||| | || |||| | || ||||||||| Sbjct: 365 tgttttaactgtggtgtagatggtcattgggctcgtgactgcacaacaggggactggaag 424 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 425 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 468 Score = 44.1 bits (22), Expect = 0.49 Identities = 73/90 (81%) Strand = Plus / Plus Query: 159 tcttttcagcaaatatggaagaatacgggaagtggaattgaagcgcgactatgcattcat 218 |||||| |||| ||| |||||| | || || ||||| ||||||| || ||||| ||| | Sbjct: 151 tctttttagcagatacggaagagtgcgagatgtggatatgaagcgagattatgctttcgt 210 Query: 219 tgaattcagtgattctcgtgatgctgatga 248 |||||| ||||| | |||||||||||||| Sbjct: 211 tgaatttggtgatccccgtgatgctgatga 240
>ref|NM_115210.4| Arabidopsis thaliana RSZ32; nucleic acid binding AT3G53500 (RSZ32) transcript variant AT3G53500.2 mRNA, complete cds Length = 1139 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||| ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 425 gactggaagaataaatgttaccgctgtggtgaaagaggacacattgagagaaa 477 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 166 agcaaatatggaagaatacgggaagtggaattgaagcgcgactatgcattcattgaattc 225 |||| ||| |||||| |||| || ||||| ||||||| || ||||| || ||||||| Sbjct: 167 agcagatacggaagagtacgagatgtggatatgaagcgtgattatgcctttgttgaattt 226 Query: 226 agtgattctcgtgatgctgatga 248 |||||| |||||||||||||||| Sbjct: 227 agtgatcctcgtgatgctgatga 249
>ref|NM_180684.2| Arabidopsis thaliana RSZ32; nucleic acid binding AT3G53500 (RSZ32) transcript variant AT3G53500.1 mRNA, complete cds Length = 1441 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||| ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 727 gactggaagaataaatgttaccgctgtggtgaaagaggacacattgagagaaa 779 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatga 248 ||||||| || ||||| || ||||||| |||||| |||||||||||||||| Sbjct: 500 tgaagcgtgattatgcctttgttgaatttagtgatcctcgtgatgctgatga 551
>gb|BT001034.1| Arabidopsis thaliana At3g53500/F4P12_200 mRNA, complete cds Length = 732 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||| ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 229 gactggaagaataaatgttaccgctgtggtgaaagaggacacattgagagaaa 281 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatga 248 ||||||| || ||||| || ||||||| |||||| |||||||||||||||| Sbjct: 2 tgaagcgtgattatgcctttgttgaatttagtgatcctcgtgatgctgatga 53
>gb|AY095996.1| Arabidopsis thaliana AT3g53500/F4P12_200 mRNA, complete cds Length = 1369 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||| ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 656 gactggaagaataaatgttaccgctgtggtgaaagaggacacattgagagaaa 708 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatga 248 ||||||| || ||||| || ||||||| |||||| |||||||||||||||| Sbjct: 429 tgaagcgtgattatgcctttgttgaatttagtgatcctcgtgatgctgatga 480
>emb|BX822765.1|CNS0A76B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1703 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||| ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 1027 gactggaagaataaatgttaccgctgtggtgaaagaggacacattgagagaaa 1079 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 gaattcagtgattctcgtgatgctgatga 248 ||||| |||||| |||||||||||||||| Sbjct: 823 gaatttagtgatcctcgtgatgctgatga 851
>emb|BX822711.1|CNS0A76Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1708 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||| ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 1028 gactggaagaataaatgttaccgctgtggtgaaagaggacacattgagagaaa 1080 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 220 gaattcagtgattctcgtgatgctgatga 248 ||||| |||||| |||||||||||||||| Sbjct: 824 gaatttagtgatcctcgtgatgctgatga 852
>emb|BX824622.1|CNS0A6U2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1400 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||| ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 727 gactggaagaataaatgttaccgctgtggtgaaagaggacacattgagagaaa 779 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatga 248 ||||||| || ||||| || ||||||| |||||| |||||||||||||||| Sbjct: 500 tgaagcgtgattatgcctttgttgaatttagtgatcctcgtgatgctgatga 551
>emb|BX823668.1|CNS0A4WJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS64ZE12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1446 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||| ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 762 gactggaagaataaatgttaccgctgtggtgaaagaggacacattgagagaaa 814
>emb|BX823008.1|CNS0A4UF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB80ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1054 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||| ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 425 gactggaagaataaatgttaccgctgtggtgaaagaggacacattgagagaaa 477 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 166 agcaaatatggaagaatacgggaagtggaattgaagcgcgactatgcattcattgaattc 225 |||| ||| |||||| |||| || ||||| ||||||| || ||||| || ||||||| Sbjct: 167 agcagatacggaagagtacgagatgtggatatgaagcgtgattatgcctttgttgaattt 226 Query: 226 agtgattctcgtgatgctgatga 248 |||||| |||||||||||||||| Sbjct: 227 agtgatcctcgtgatgctgatga 249
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||||||||| ||||| ||||||||||| |||||||| || || |||||||| Sbjct: 76125 gactggaagaataaatgttaccgctgtggtgaaagaggacacattgagagaaa 76073 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 220 gaattcagtgattctcgtgatgctgatga 248 ||||| |||||| |||||||||||||||| Sbjct: 76425 gaatttagtgatcctcgtgatgctgatga 76397
>emb|BX842466.1|CNS0A9HM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH11ZG06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1261 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 388 tgtttcaactgtggtatagatggtcattgggccagggattgcaaggctggtgactggaag 447 ||||| || |||||| |||||||||||||||| | || || | || || ||||||||| Sbjct: 572 tgttttaattgtggtgtagatggtcattgggctcgtgactgaacagcaggggactggaag 631 Query: 448 aacaaatgctaccgctgtggagaaagaggccatatagagagaaa 491 ||||| || ||||| |||||||| ||||| || || |||||||| Sbjct: 632 aacaagtgttaccgttgtggagagagaggacacattgagagaaa 675 Score = 40.1 bits (20), Expect = 7.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatga 248 ||||||| || ||||| ||| ||||||| ||||| | |||||||||||||| Sbjct: 396 tgaagcgagattatgctttcgttgaatttggtgatccccgtgatgctgatga 447
>emb|BX823516.1|CNS0A7QK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS46ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1065 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtggagaaagagg 476 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 379 gactggaagaaaaaatgttaccgctgtggtgaaagagg 416
>emb|BX842118.1|CNS09YBX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1317 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Plus Query: 197 tgaagcgcgactatgcattcattgaattcagtgattctcgtgatgctgatga 248 ||||||| || ||||| || ||||||| |||||| |||||||||||||||| Sbjct: 414 tgaagcgtgattatgcctttgttgaatttagtgatcctcgtgatgctgatga 465 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 439 gactggaagaacaaatgctaccgctgtgg 467 ||||||||||| ||||| ||||||||||| Sbjct: 641 gactggaagaataaatgttaccgctgtgg 669
>gb|AC004760.1| Homo sapiens chromosome 16, cosmid clone 316H7 (LANL), complete sequence Length = 44496 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 10 ggacgaccccgccgccgctccgtccgacc 38 |||||||||||| ||||||||| |||||| Sbjct: 20381 ggacgaccccgcagccgctccgcccgacc 20353
>emb|AL357518.15| Human DNA sequence from clone RP11-679B17 on chromosome 6 Contains a novel gene and a CpG island, complete sequence Length = 115378 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgccgcccggctcccgaggaga 73 |||||||||||||| |||||||||| Sbjct: 7726 cgccgccgcccggcacccgaggaga 7750
>gb|AF531246.1| Zamia skinneri internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1226 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 cccggacgaccccgccgccgc 27 ||||||||||||||||||||| Sbjct: 615 cccggacgaccccgccgccgc 595
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gggttctgcgccgccgcccgg 61 ||||||||||||||||||||| Sbjct: 2815248 gggttctgcgccgccgcccgg 2815228
>dbj|AB076232.1| Zamia fairchildiana gene for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 26S rRNA, partial and complete sequence Length = 1158 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 cccggacgaccccgccgccgc 27 ||||||||||||||||||||| Sbjct: 590 cccggacgaccccgccgccgc 570
>gb|AC006111.4| Homo sapiens chromosome 16 clone RP11-461A8, complete sequence Length = 190814 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 10 ggacgaccccgccgccgctccgtccgacc 38 |||||||||||| ||||||||| |||||| Sbjct: 174877 ggacgaccccgcagccgctccgcccgacc 174905
>ref|XM_550020.1| Oryza sativa (japonica cultivar-group), mRNA Length = 153 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ccccgccgccgctccgtccg 35 |||||||||||||||||||| Sbjct: 27 ccccgccgccgctccgtccg 8
>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224115 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctagaatatcttttcagcaa 170 |||||||||||||||||||| Sbjct: 16456 ctagaatatcttttcagcaa 16475
>gb|BT015234.1| Drosophila melanogaster RE06878 full insert cDNA Length = 4103 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 2559 attgttgagtttgctaaagg 2578
>ref|XM_364319.1| Magnaporthe grisea 70-15 hypothetical protein (MG09164.4) partial mRNA Length = 1881 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gaccccgccgccgctccgtc 33 |||||||||||||||||||| Sbjct: 73 gaccccgccgccgctccgtc 92
>gb|AC149571.3| Rhinolophus ferrumequinum clone VMRC7-305L23, complete sequence Length = 190426 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gcgccgccgcccggctcccg 67 |||||||||||||||||||| Sbjct: 38542 gcgccgccgcccggctcccg 38523
>emb|CR719310.2|CNS0GHYS Tetraodon nigroviridis full-length cDNA Length = 888 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ttcagcaaatatggaagaat 182 |||||||||||||||||||| Sbjct: 347 ttcagcaaatatggaagaat 366
>emb|CR708211.2|CNS0G9EN Tetraodon nigroviridis full-length cDNA Length = 1651 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ttcagcaaatatggaagaat 182 |||||||||||||||||||| Sbjct: 229 ttcagcaaatatggaagaat 248
>gb|BT012469.1| Drosophila melanogaster RE33854 full insert cDNA Length = 5961 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 2560 attgttgagtttgctaaagg 2579
>ref|XM_776985.1| PREDICTED: Strongylocentrotus purpuratus similar to Serine/threonine phosphatase 4 regulatory subunit 1 (LOC576704), mRNA Length = 3074 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 gcctcctccaggaacaggccgttg 389 ||||||||||||| |||||||||| Sbjct: 2153 gcctcctccaggatcaggccgttg 2176
>emb|AL513331.17| Human DNA sequence from clone RP11-157D18 on chromosome 1 Contains a novel gene (MGC47816), a ribosomal protein S15 (RPS15) pseudogene, the 3' end of the ZMYND12 gene for zinc finger MYND domain containing 12 and one CpG island, complete sequence Length = 69373 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 tcttttcagcaaatatggaa 178 |||||||||||||||||||| Sbjct: 41336 tcttttcagcaaatatggaa 41317
>emb|AL139010.29| Human DNA sequence from clone RP11-444M10 on chromosome 1 Contains the 3' end of a novel gene, a novel gene and the KIRREL gene for kin of IRRE like (Drosophila), complete sequence Length = 189477 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 gggcctcctccaggaacagg 383 |||||||||||||||||||| Sbjct: 144699 gggcctcctccaggaacagg 144718
>gb|AF264696.2| Cloning vector pFB-ERV, complete sequence Length = 11065 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 3742 attgttgagtttgctaaagg 3761
>gb|AC102953.5| Homo sapiens BAC clone RP11-1246C19 from 7, complete sequence Length = 148996 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ctgcgccgccgcccggctcc 65 |||||||||||||||||||| Sbjct: 85445 ctgcgccgccgcccggctcc 85426
>ref|NM_165465.1| Drosophila melanogaster Ecdysone receptor CG1765-RB, transcript variant B (EcR), mRNA Length = 5586 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 2561 attgttgagtttgctaaagg 2580
>ref|NM_165464.1| Drosophila melanogaster Ecdysone receptor CG1765-RC, transcript variant C (EcR), mRNA Length = 4620 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 1595 attgttgagtttgctaaagg 1614
>ref|NM_165463.1| Drosophila melanogaster Ecdysone receptor CG1765-RE, transcript variant E (EcR), mRNA Length = 4872 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 1847 attgttgagtttgctaaagg 1866
>ref|NM_165462.1| Drosophila melanogaster Ecdysone receptor CG1765-RD, transcript variant D (EcR), mRNA Length = 4826 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 1801 attgttgagtttgctaaagg 1820
>ref|NM_165461.1| Drosophila melanogaster Ecdysone receptor CG1765-RA, transcript variant A (EcR), mRNA Length = 4744 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 1719 attgttgagtttgctaaagg 1738
>gb|AY075461.1| Drosophila melanogaster RE16656 full length cDNA Length = 3754 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 1802 attgttgagtttgctaaagg 1821
>gb|AC079239.6| Homo sapiens BAC clone RP11-722M1 from 4, complete sequence Length = 182406 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 aggccatatagagagaaatt 493 |||||||||||||||||||| Sbjct: 82024 aggccatatagagagaaatt 82043
>gb|AY058575.1| Drosophila melanogaster LD26915 full length cDNA Length = 1891 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 343 attgttgagtttgctaaagg 362
>emb|CR385607.1| Gallus gallus finished cDNA, clone ChEST380d14 Length = 972 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gccgccgcccggctcccgag 69 |||||||||||||||||||| Sbjct: 38 gccgccgcccggctcccgag 57
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ctgcgccgccgcccggctcc 65 |||||||||||||||||||| Sbjct: 924113 ctgcgccgccgcccggctcc 924132
>gb|AC008339.2|AC008339 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR13P06, complete sequence Length = 180699 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 77496 attgttgagtttgctaaagg 77477
>gb|AC009255.4|AC009255 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR39E09, complete sequence Length = 163990 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 121321 attgttgagtttgctaaagg 121302
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ccccgccgccgctccgtccg 35 |||||||||||||||||||| Sbjct: 15299356 ccccgccgccgctccgtccg 15299337
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gcgccgccgcccggctcccg 67 |||||||||||||||||||| Sbjct: 654386 gcgccgccgcccggctcccg 654367
>gb|AC013410.5| Homo sapiens BAC clone RP11-495I2 from 2, complete sequence Length = 200900 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 acctagaatatcttttcagcaaat 172 ||||| |||||||||||||||||| Sbjct: 9844 acctaaaatatcttttcagcaaat 9821
>gb|AY186787.1| Rice stripe virus isolate CX segment 1 gene, complete sequence Length = 8969 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 atctagatggcagggatgttgatg 283 |||||| ||||||||||||||||| Sbjct: 7222 atctaggtggcagggatgttgatg 7245
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ccccgccgccgctccgtccg 35 |||||||||||||||||||| Sbjct: 6355 ccccgccgccgctccgtccg 6336
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gggagagggcctcctccagg 377 |||||||||||||||||||| Sbjct: 881254 gggagagggcctcctccagg 881273
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ccccgccgccgctccgtccg 35 |||||||||||||||||||| Sbjct: 84197 ccccgccgccgctccgtccg 84216
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0475E07 Length = 139961 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ccccgccgccgctccgtccg 35 |||||||||||||||||||| Sbjct: 85369 ccccgccgccgctccgtccg 85350
>gb|AC007121.1|AC007121 Drosophila melanogaster, chromosome 2R, region 42A8-42A16, P1 clones DS06954 and DS05325, complete sequence Length = 135182 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 67446 attgttgagtttgctaaagg 67465
>gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 of 73 of the complete sequence Length = 305162 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 139983 attgttgagtttgctaaagg 139964
>gb|AF098284.1|AF098284 Cloning vector pERV3, complete sequence Length = 8363 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 4127 attgttgagtttgctaaagg 4108
>dbj|AP001922.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2530H12, complete sequence Length = 219366 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 gtgatgctgatgaagcccgg 255 |||||||||||||||||||| Sbjct: 51651 gtgatgctgatgaagcccgg 51670
>gb|AC156624.1| Ornithorhynchus anatinus clone OA_Bb-193E18, complete sequence Length = 162554 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggggagagggcctcctcca 375 |||||||||||||||||||| Sbjct: 64817 tggggagagggcctcctcca 64836
>gb|AC155729.3| Mus musculus 6 BAC RP24-173B18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198782 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctagaatatcttttcagcaa 170 |||||||||||||||||||| Sbjct: 157814 ctagaatatcttttcagcaa 157833
>gb|DQ250783.1| Uncultured sulfate-reducing bacterium clone I-54 dissimilatory sulfite reductase alpha subunit-like (dsrA) gene, partial sequence Length = 700 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gaagaatacgggaagtggaa 195 |||||||||||||||||||| Sbjct: 54 gaagaatacgggaagtggaa 73
>gb|M74078.1|DROECR Drosophila melanogaster ecdysone receptor (EcR) mRNA, complete cds Length = 5534 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 attgttgagtttgctaaagg 314 |||||||||||||||||||| Sbjct: 2488 attgttgagtttgctaaagg 2507 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,530,934 Number of Sequences: 3902068 Number of extensions: 4530934 Number of successful extensions: 146481 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145877 Number of HSP's gapped (non-prelim): 592 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
