ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal33l14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108753.1| Zea mays PCO090965 mRNA sequence Length = 1019 Score = 186 bits (94), Expect = 6e-44 Identities = 202/238 (84%) Strand = Plus / Plus Query: 421 tatgtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctc 480 |||||||| || |||||||| ||||| || ||||||||||||||||||||| | |||||| Sbjct: 681 tatgtgcgtgcagacaagattgatcttacgagcctcgacatccagctggagaaccagctc 740 Query: 481 aacaagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagatt 540 | ||||| ||| |||| |||| |||| || | ||| || |||| ||| |||||||| Sbjct: 741 accaagacctggggcaaagccaatctcaaatcccaggggccaaaggaggagtgggagatc 800 Query: 541 gaccttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctac 600 |||||||| |||||||||||||| | ||||||||||||||||| ||||| || |||||| Sbjct: 801 gaccttgcaaagctggagatccgctatgtcatcgctcaggggacgtatggcacggtctac 860 Query: 601 cgcggcacctatgatggccagcaagtcgcagtgaagctgttggattggggagaagatg 658 || |||||||| ||||| ||| | |||||||||||||| ||||||||||||||||||| Sbjct: 861 cggggcacctacgatggacaggacgtcgcagtgaagcttttggattggggagaagatg 918
>ref|XM_469008.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1567 Score = 180 bits (91), Expect = 4e-42 Identities = 199/235 (84%) Strand = Plus / Plus Query: 424 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 483 ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | | Sbjct: 85 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 144 Query: 484 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 543 |||| ||| ||||| |||| ||||| | | || || |||| |||||||||||| ||| Sbjct: 145 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 204 Query: 544 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 603 || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || ||| Sbjct: 205 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 264 Query: 604 ggcacctatgatggccagcaagtcgcagtgaagctgttggattggggagaagatg 658 ||||| ||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct: 265 ggcacgtatgatggccaagatgttgcagtgaagctgttggattggggagaagatg 319
>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete sequence Length = 120254 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Minus Query: 424 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 483 ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | | Sbjct: 109762 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 109703 Query: 484 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 543 |||| ||| ||||| |||| ||||| | | || || |||| |||||||||||| ||| Sbjct: 109702 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 109643 Query: 544 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 603 || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || ||| Sbjct: 109642 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 109583 Query: 604 ggcacctatgatggcca 620 ||||| ||||||||||| Sbjct: 109582 ggcacgtatgatggcca 109566 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 629 cagtgaagctgttggattggggagaagatg 658 |||||||||||||||||||||||||||||| Sbjct: 107556 cagtgaagctgttggattggggagaagatg 107527
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 424 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 483 ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | | Sbjct: 24364195 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 24364254 Query: 484 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 543 |||| ||| ||||| |||| ||||| | | || || |||| |||||||||||| ||| Sbjct: 24364255 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 24364314 Query: 544 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 603 || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || ||| Sbjct: 24364315 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 24364374 Query: 604 ggcacctatgatggcca 620 ||||| ||||||||||| Sbjct: 24364375 ggcacgtatgatggcca 24364391 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 629 cagtgaagctgttggattggggagaagatg 658 |||||||||||||||||||||||||||||| Sbjct: 24366401 cagtgaagctgttggattggggagaagatg 24366430
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Minus Query: 424 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 483 ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | | Sbjct: 16429 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 16370 Query: 484 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 543 |||| ||| ||||| |||| ||||| | | || || |||| |||||||||||| ||| Sbjct: 16369 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 16310 Query: 544 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 603 || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || ||| Sbjct: 16309 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 16250 Query: 604 ggcacctatgatggcca 620 ||||| ||||||||||| Sbjct: 16249 ggcacgtatgatggcca 16233 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Minus Query: 629 cagtgaagctgttggattggggagaagatg 658 |||||||||||||||||||||||||||||| Sbjct: 14223 cagtgaagctgttggattggggagaagatg 14194
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 424 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 483 ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | | Sbjct: 24281664 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 24281723 Query: 484 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 543 |||| ||| ||||| |||| ||||| | | || || |||| |||||||||||| ||| Sbjct: 24281724 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 24281783 Query: 544 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 603 || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || ||| Sbjct: 24281784 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 24281843 Query: 604 ggcacctatgatggcca 620 ||||| ||||||||||| Sbjct: 24281844 ggcacgtatgatggcca 24281860 Score = 60.0 bits (30), Expect = 1e-05 Identities = 30/30 (100%) Strand = Plus / Plus Query: 629 cagtgaagctgttggattggggagaagatg 658 |||||||||||||||||||||||||||||| Sbjct: 24283870 cagtgaagctgttggattggggagaagatg 24283899
>gb|AY105609.1| Zea mays PCO130861 mRNA sequence Length = 773 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 601 cgcggcacctatgatggccagcaagtcgcagtgaagctgttggattggggagaagatg 658 |||||||| |||||||| ||| | |||||||| || || ||||||||||| ||||||| Sbjct: 36 cgcggcacgtatgatgggcaggacgtcgcagtaaaactattggattggggtgaagatg 93
>ref|NM_202754.1| Arabidopsis thaliana ATMRK1; kinase AT3G63260 (ATMRK1) transcript variant AT3G63260.2 mRNA, complete cds Length = 1490 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 623 aagtcgcagtgaagctgttggattggggagaagatg 658 ||||||||||||| |||| |||||||||||||||| Sbjct: 505 aagtcgcagtgaaagtgttagattggggagaagatg 540
>ref|NM_116191.2| Arabidopsis thaliana ATMRK1; kinase AT3G63260 (ATMRK1) transcript variant AT3G63260.1 mRNA, complete cds Length = 1645 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 623 aagtcgcagtgaagctgttggattggggagaagatg 658 ||||||||||||| |||| |||||||||||||||| Sbjct: 577 aagtcgcagtgaaagtgttagattggggagaagatg 612
>gb|AY117337.1| Arabidopsis thaliana putative ATMRK1 protein (At3g63260) mRNA, complete cds Length = 1207 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 623 aagtcgcagtgaagctgttggattggggagaagatg 658 ||||||||||||| |||| |||||||||||||||| Sbjct: 317 aagtcgcagtgaaagtgttagattggggagaagatg 352
>gb|AY080717.1| Arabidopsis thaliana putative ATMRK1 protein (At3g63260) mRNA, complete cds Length = 1591 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 623 aagtcgcagtgaagctgttggattggggagaagatg 658 ||||||||||||| |||| |||||||||||||||| Sbjct: 525 aagtcgcagtgaaagtgttagattggggagaagatg 560
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 59 tcctcgccacctccgccgcctcgcccccgccc 90 ||||||||||| || ||||||||||||||||| Sbjct: 214627 tcctcgccacccccaccgcctcgcccccgccc 214658
>emb|BX822415.1|CNS0A793 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1340 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 623 aagtcgcagtgaagctgttggattggggagaagatg 658 ||||||||||||| |||| |||||||||||||||| Sbjct: 419 aagtcgcagtgaaagtgttagattggggagaagatg 454
>emb|BX823676.1|CNS0A6O3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS65ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 623 aagtcgcagtgaagctgttggattggggagaagatg 658 ||||||||||||| |||| |||||||||||||||| Sbjct: 499 aagtcgcagtgaaagtgttagattggggagaagatg 534
>emb|BX823523.1|CNS0A4WD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1537 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 623 aagtcgcagtgaagctgttggattggggagaagatg 658 ||||||||||||| |||| |||||||||||||||| Sbjct: 495 aagtcgcagtgaaagtgttagattggggagaagatg 530
>gb|AY086480.1| Arabidopsis thaliana clone 253505 mRNA, complete sequence Length = 1591 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 623 aagtcgcagtgaagctgttggattggggagaagatg 658 ||||||||||||| |||| |||||||||||||||| Sbjct: 522 aagtcgcagtgaaagtgttagattggggagaagatg 557
>dbj|AB006810.1| Arabidopsis thaliana mRNA for ATMRK1, complete cds Length = 1626 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 623 aagtcgcagtgaagctgttggattggggagaagatg 658 ||||||||||||| |||| |||||||||||||||| Sbjct: 576 aagtcgcagtgaaagtgttagattggggagaagatg 611
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 cctccgccgcctcgcccccgcc 89 |||||||||||||||||||||| Sbjct: 59195 cctccgccgcctcgcccccgcc 59216
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 54 tcatctcctcgccacctccgccgcctcgcc 83 ||||||||||||| ||||||||||| |||| Sbjct: 37406 tcatctcctcgccccctccgccgccgcgcc 37435
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 54 tcatctcctcgccacctccgccgcctcgcc 83 ||||||||||||| ||||||||||| |||| Sbjct: 241586 tcatctcctcgccccctccgccgccgcgcc 241615 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctccgccgcctcgcccccgcc 89 |||||||||||||||||||| |||| Sbjct: 24505621 ccacctccgccgcctcgccctcgcc 24505597 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ccgccgcctcgcccccgcccaacctccgccgcc 103 |||||||||||||| ||||| | |||||||||| Sbjct: 20365 ccgccgcctcgcccgcgccctagctccgccgcc 20397
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctccgccgcctcgcccccgcc 89 |||||||||||||||||||||| Sbjct: 16601047 cctccgccgcctcgcccccgcc 16601026 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ctccgccgcctcgcccccgcccaa 92 |||| ||||||||||||||||||| Sbjct: 13957840 ctcctccgcctcgcccccgcccaa 13957817
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctccgccgcctcgcccccgcc 89 |||||||||||||||||||||| Sbjct: 4452491 cctccgccgcctcgcccccgcc 4452470 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 54 tcatctcctcgccacctccgccgcc 78 ||||||||||||| ||||||||||| Sbjct: 11777590 tcatctcctcgccccctccgccgcc 11777566 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cgccgcctcgcccccgccca 91 |||||||||||||||||||| Sbjct: 22338695 cgccgcctcgcccccgccca 22338714 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 cctcgccacctccgccgcctcgcc 83 ||||||| |||||||||||||||| Sbjct: 3783782 cctcgcctcctccgccgcctcgcc 3783805
>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1077E10 Length = 100821 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctccgccgcctcgcccccgcc 89 |||||||||||||||||||||| Sbjct: 24979 cctccgccgcctcgcccccgcc 24958
>dbj|AK110629.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-B07, full insert sequence Length = 922 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 54 tcatctcctcgccacctccgccgcctcgcc 83 ||||||||||||| ||||||||||| |||| Sbjct: 580 tcatctcctcgccccctccgccgccgcgcc 609
>dbj|AK109696.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F01, full insert sequence Length = 1692 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 625 gtcgcagtgaagctgttggattgggg 650 ||||||||||| |||||||||||||| Sbjct: 466 gtcgcagtgaaactgttggattgggg 491
>dbj|AK102352.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091E11, full insert sequence Length = 1347 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 cctccgccgcctcgcccccgcc 89 |||||||||||||||||||||| Sbjct: 140 cctccgccgcctcgcccccgcc 161
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 cctccgccgcctcgcccccgcc 89 |||||||||||||||||||||| Sbjct: 16609288 cctccgccgcctcgcccccgcc 16609267 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ctccgccgcctcgcccccgcccaa 92 |||| ||||||||||||||||||| Sbjct: 13965182 ctcctccgcctcgcccccgcccaa 13965159
>ref|XM_469711.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1224 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 594 cgtctaccgcggcacctatgatggccagcaagtcgcagtgaagctgttggattgggg 650 |||||||||||||||||| || ||||| | ||||| |||||| || |||| ||||| Sbjct: 312 cgtctaccgcggcacctacgacggccatgacgtcgccgtgaaggtgctggactgggg 368
>ref|XM_472987.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctccgccgcctcgcccccgcc 89 |||||||||||||||||||| |||| Sbjct: 38 ccacctccgccgcctcgccctcgcc 62
>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08, complete sequence Length = 132017 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 71 ccgccgcctcgcccccgcccaacctccgccgcc 103 |||||||||||||| ||||| ||| |||||||| Sbjct: 97842 ccgccgcctcgcccgcgccctaccgccgccgcc 97810
>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24, complete sequence Length = 148784 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 71 ccgccgcctcgcccccgcccaacctccgccgcc 103 |||||||||||||| ||||| ||| |||||||| Sbjct: 47453 ccgccgcctcgcccgcgccctaccgccgccgcc 47421
>gb|AC131999.9| Mus musculus chromosome 15, clone RP24-139E21, complete sequence Length = 214392 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 tttcccacccagcttcctccc 234 ||||||||||||||||||||| Sbjct: 97463 tttcccacccagcttcctccc 97443
>gb|AC122303.2| Mus musculus BAC clone RP23-279L13 from 6, complete sequence Length = 188201 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 76 gcctcgcccccgcccaacctccgccgccc 104 ||||||||||| ||||||| ||||||||| Sbjct: 116574 gcctcgcccccccccaacccccgccgccc 116602
>ref|XM_775936.1| PREDICTED: Strongylocentrotus purpuratus similar to CG11081-PA, isoform A (LOC575541), mRNA Length = 4581 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 ggagcaacagctcaacaagaa 488 ||||||||||||||||||||| Sbjct: 4248 ggagcaacagctcaacaagaa 4268
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 71 ccgccgcctcgcccccgcccaacctccgccgcc 103 |||||||||||||| ||||| | |||||||||| Sbjct: 20365 ccgccgcctcgcccgcgccctagctccgccgcc 20397
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctccgccgcctcgcccccgcc 89 |||||||||||||||||||| |||| Sbjct: 65252 ccacctccgccgcctcgccctcgcc 65228
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 cgccacctccgccgcctcgcc 83 ||||||||||||||||||||| Sbjct: 24219729 cgccacctccgccgcctcgcc 24219709 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 tcctcgccacctccgccgcctcgcc 83 |||||||| |||||||||||||||| Sbjct: 1965617 tcctcgcctcctccgccgcctcgcc 1965593
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 71 ccgccgcctcgcccccgcccaacctccgccgcc 103 |||||||||||||| ||||| ||| |||||||| Sbjct: 20209181 ccgccgcctcgcccgcgccctaccgccgccgcc 20209149 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 catctcctcgccacctccgccgcc 78 |||| ||||||||||||||||||| Sbjct: 22304244 catcccctcgccacctccgccgcc 22304267 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 catctcctcgccacctccgccgcc 78 |||| ||||||||||||||||||| Sbjct: 5842500 catcccctcgccacctccgccgcc 5842523
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 ctggttcctcgcctcgccgtt 214 ||||||||||||||||||||| Sbjct: 19778270 ctggttcctcgcctcgccgtt 19778250
>gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome P450 mRNA, complete cds Length = 1719 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 cgccacctccgccgcctcgcc 83 ||||||||||||||||||||| Sbjct: 443 cgccacctccgccgcctcgcc 463
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 394 aggaccgggagcttggggagcagcg 418 |||||||||||||||| |||||||| Sbjct: 4557121 aggaccgggagcttggcgagcagcg 4557097
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 ctggttcctcgcctcgccgtt 214 ||||||||||||||||||||| Sbjct: 86821 ctggttcctcgcctcgccgtt 86801
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 ctggttcctcgcctcgccgtt 214 ||||||||||||||||||||| Sbjct: 135028 ctggttcctcgcctcgccgtt 135008
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 54 tcatctcctcgccacctccgccgcc 78 ||||||||||||| ||||||||||| Sbjct: 20408 tcatctcctcgccccctccgccgcc 20384
>dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A02, full insert sequence Length = 1698 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 cgccacctccgccgcctcgcc 83 ||||||||||||||||||||| Sbjct: 437 cgccacctccgccgcctcgcc 457
>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full insert sequence Length = 2822 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctccgccgcctcgcccccgcc 89 |||||||||||||||||||| |||| Sbjct: 45 ccacctccgccgcctcgccctcgcc 69
>dbj|AK104854.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B10, full insert sequence Length = 1353 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctccgccgcctcgcccccgcc 89 |||||||||||||||||||| |||| Sbjct: 121 ccacctccgccgcctcgccctcgcc 145
>dbj|AK066522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072G15, full insert sequence Length = 1373 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ccacctccgccgcctcgcccccgcc 89 |||||||||||||||||||| |||| Sbjct: 121 ccacctccgccgcctcgccctcgcc 145
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 gatcgatctcaccagcctcga 458 ||||||||||||||||||||| Sbjct: 4462364 gatcgatctcaccagcctcga 4462344
>gb|AF128442.1|AF128442 Lolium perenne pollen allergen Lol p VA precursor, mRNA, complete cds Length = 1229 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 ctcctcgccacctccgccgcc 78 ||||||||||||||||||||| Sbjct: 328 ctcctcgccacctccgccgcc 348
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 cgccacctccgccgcctcgcc 83 ||||||||||||||||||||| Sbjct: 24147935 cgccacctccgccgcctcgcc 24147915 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 59 tcctcgccacctccgccgcctcgcc 83 |||||||| |||||||||||||||| Sbjct: 1965568 tcctcgcctcctccgccgcctcgcc 1965544
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 cgccacctccgccgcctcgcc 83 ||||||||||||||||||||| Sbjct: 104420 cgccacctccgccgcctcgcc 104400
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 ccacctccgccgcctcgcccccgcc 89 |||||||||||||||||||| |||| Sbjct: 98943 ccacctccgccgcctcgccctcgcc 98919
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 tcctcgccacctccgccgcctcgcc 83 |||||||| |||||||||||||||| Sbjct: 2604 tcctcgcctcctccgccgcctcgcc 2628
>emb|AL929556.14| Mouse DNA sequence from clone RP23-353B17 on chromosome 2, complete sequence Length = 192715 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 tttcccacccagcttcctccc 234 ||||||||||||||||||||| Sbjct: 102051 tttcccacccagcttcctccc 102031
>ref|XM_476087.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 909 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 catctcctcgccacctccgccgcc 78 |||| ||||||||||||||||||| Sbjct: 742 catcccctcgccacctccgccgcc 719
>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07, complete sequence Length = 114135 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 catctcctcgccacctccgccgcc 78 |||| ||||||||||||||||||| Sbjct: 49264 catcccctcgccacctccgccgcc 49287
>ref|XM_476932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1164 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctcgccacctccgccgcct 79 |||||||||||||||||||| Sbjct: 25 cctcgccacctccgccgcct 6
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ctccgccgcctcgcccccgcccaa 92 |||| ||||||||||||||||||| Sbjct: 126466 ctcctccgcctcgcccccgcccaa 126443
>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence Length = 204306 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 atctcaccagcctcgacatccagc 466 |||||||||||||||| ||||||| Sbjct: 131792 atctcaccagcctcgagatccagc 131815
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 catctcctcgccacctccgccgcc 78 |||| ||||||||||||||||||| Sbjct: 5879 catcccctcgccacctccgccgcc 5902
>gb|AC008224.19| Drosophila melanogaster clone BACR29J02, complete sequence Length = 181633 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 cagctggagcaacagctcaa 482 |||||||||||||||||||| Sbjct: 49398 cagctggagcaacagctcaa 49417
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 gccttttccagcgagttccgtccc 284 |||| ||||||||||||||||||| Sbjct: 2072683 gcctgttccagcgagttccgtccc 2072660
>gb|AF142884.1| Uncultured archaeon DEEP-10 16S ribosomal RNA gene, partial sequence Length = 986 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 atctcaccagcctcgacatc 462 |||||||||||||||||||| Sbjct: 466 atctcaccagcctcgacatc 485
>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete sequence Length = 192971 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 atctcaccagcctcgacatccagc 466 |||||||||||||||| ||||||| Sbjct: 13156 atctcaccagcctcgagatccagc 13179
>emb|AL360269.21| Human DNA sequence from clone RP11-192I3 on chromosome 1 Contains the WNT9A gene for wingless-type MMTV integration site family, member 9A and a CpG island, complete sequence Length = 141703 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 tcccacccagcttcctcccgcccc 239 ||||||||||| |||||||||||| Sbjct: 71461 tcccacccagcctcctcccgcccc 71438
>emb|AL359710.15| Human DNA sequence from clone RP11-30L7 on chromosome 9 Contains part of a novel gene, the 5' end of the NR4A3 gene for nuclear receptor subfamily 4 group A, member 3 and two CpG islands, complete sequence Length = 174140 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcccccgcccaacctccgcc 100 |||||||||||||||||||| Sbjct: 157896 gcccccgcccaacctccgcc 157915
>gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 217690 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ctggagcaacagctcaacaa 485 |||||||||||||||||||| Sbjct: 163559 ctggagcaacagctcaacaa 163540
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 gccgcgacctcgccgcctcg 31 |||||||||||||||||||| Sbjct: 297219 gccgcgacctcgccgcctcg 297238
>emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, complete sequence Length = 203056 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ctgcctgaggtgaaattcaa 392 |||||||||||||||||||| Sbjct: 184817 ctgcctgaggtgaaattcaa 184836
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 agcttgcggcggccggcctt 265 |||||||||||||||||||| Sbjct: 3161412 agcttgcggcggccggcctt 3161393
>gb|S76788.1| orf {promoter-like sequence P116} [Lactobacillus paracasei, ssp. paracasei, CG11, Genomic, 155 nt] Length = 155 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 609 ctatgatggccagcaagtcg 628 |||||||||||||||||||| Sbjct: 123 ctatgatggccagcaagtcg 142
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctcgccacctccgccgcct 79 |||||||||||||||||||| Sbjct: 4714867 cctcgccacctccgccgcct 4714848
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 59 tcctcgccacctccgccgcctcgcccccgccc 90 |||| |||||| || ||||||||||||||||| Sbjct: 3159547 tcctggccacccccaccgcctcgcccccgccc 3159516
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 agcttgcggcggccggcctt 265 |||||||||||||||||||| Sbjct: 2158313 agcttgcggcggccggcctt 2158294
>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1155_H10 Length = 140475 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cgccgcctcgcccccgccca 91 |||||||||||||||||||| Sbjct: 100703 cgccgcctcgcccccgccca 100722
>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1080A02 Length = 151360 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 cctcgccacctccgccgcctcgcc 83 ||||||| |||||||||||||||| Sbjct: 23298 cctcgcctcctccgccgcctcgcc 23321
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 Length = 127992 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctcgccacctccgccgcct 79 |||||||||||||||||||| Sbjct: 32777 cctcgccacctccgccgcct 32758
>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_H10 Length = 101054 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 cctcgccacctccgccgcctcgcc 83 ||||||| |||||||||||||||| Sbjct: 91084 cctcgcctcctccgccgcctcgcc 91107
>dbj|AK111777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077D02, full insert sequence Length = 1779 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctcgccacctccgccgcct 79 |||||||||||||||||||| Sbjct: 237 cctcgccacctccgccgcct 218
>dbj|AK110966.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-B06, full insert sequence Length = 2040 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 catctcctcgccacctccgccgcc 78 |||| ||||||||||||||||||| Sbjct: 1263 catcccctcgccacctccgccgcc 1286
>emb|AJ327848.1|HSA327848 Homo sapiens genomic sequence surrounding NotI site, clone NR1-DF4R Length = 824 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcccccgcccaacctccgcc 100 |||||||||||||||||||| Sbjct: 227 gcccccgcccaacctccgcc 208
>gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, complete sequence Length = 138426 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cgccgcgttcctcaagactt 329 |||||||||||||||||||| Sbjct: 88505 cgccgcgttcctcaagactt 88524
>emb|AL590764.3|HS1091N2 Homo sapiens chromosome X from PAC 1091N2, region GJB1-DXS559 map Xq13.1, complete sequence Length = 201197 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccacctccgccgcctcgccc 84 |||||||||||||||||||| Sbjct: 188113 ccacctccgccgcctcgccc 188132
>emb|CR318592.7| Zebrafish DNA sequence from clone CH211-51F17 in linkage group 19, complete sequence Length = 124310 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gtttagttattttgttggtt 136 |||||||||||||||||||| Sbjct: 32635 gtttagttattttgttggtt 32616
>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506C07 Length = 123451 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctcgccacctccgccgcct 79 |||||||||||||||||||| Sbjct: 122240 cctcgccacctccgccgcct 122221
>dbj|AP001024.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-832N8, complete sequence Length = 183444 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tttcccacccagcttcctcc 233 |||||||||||||||||||| Sbjct: 21930 tttcccacccagcttcctcc 21911
>dbj|AP002353.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2651C21, complete sequence Length = 202607 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tttcccacccagcttcctcc 233 |||||||||||||||||||| Sbjct: 111773 tttcccacccagcttcctcc 111754
>gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 of 118 of the complete sequence Length = 292632 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 cagctggagcaacagctcaa 482 |||||||||||||||||||| Sbjct: 79946 cagctggagcaacagctcaa 79927
>dbj|AB009371.1| Mus musculus Tsc2 and Nthl1 genes for tuberin and homlogue of endonuclease III, complete cds Length = 11919 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 atctcaccagcctcgacatccagc 466 |||||||||||||||| ||||||| Sbjct: 4442 atctcaccagcctcgagatccagc 4419
>emb|AL591067.35| Mouse DNA sequence from clone RP23-333D2 on chromosome 11, complete sequence Length = 196512 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 tggccagcaagtcgcagtga 634 |||||||||||||||||||| Sbjct: 41799 tggccagcaagtcgcagtga 41818
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 aggccgcgacctcgccgcct 29 |||||||||||||||||||| Sbjct: 2341273 aggccgcgacctcgccgcct 2341254
>emb|AL683893.26| Mouse DNA sequence from clone RP23-122N18 on chromosome 4, complete sequence Length = 204841 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcccccgcccaacctccgcc 100 |||||||||||||||||||| Sbjct: 65511 gcccccgcccaacctccgcc 65530
>emb|AL590762.1|HSXDPA Homo sapiens chromosome X sequence from 6 PACs 1 BAC and 1 cosmid, region GJB1-DXS559 map Xq13.1; segment 1/2, complete sequence Length = 305000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccacctccgccgcctcgccc 84 |||||||||||||||||||| Sbjct: 23923 ccacctccgccgcctcgccc 23942 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,240,391 Number of Sequences: 3902068 Number of extensions: 5240391 Number of successful extensions: 100077 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97950 Number of HSP's gapped (non-prelim): 2121 length of query: 658 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 635 effective length of database: 17,143,297,704 effective search space: 10885994042040 effective search space used: 10885994042040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
