ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal34a06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY236152.1| Triticum aestivum cytosolic malate dehydrogenase mRNA, partial cds Length = 683 Score = 281 bits (142), Expect = 3e-73 Identities = 148/150 (98%) Strand = Plus / Plus Query: 1 gaagcctgttcgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccac 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 534 gaagcctgttcgtgaacttgttcaagatgatgaatggctaaatggggagttcattgccac 593 Query: 61 tgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgc 120 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 tgtccagcagcgtggtgctgcaatcatcaaagcgaggaagctctccagtgctctctctgc 653 Query: 121 tgccagctcagcttgtgatcacatccgtga 150 |||||||||||||||||||||||||||||| Sbjct: 654 tgccagctcagcttgtgatcacatccgtga 683
>gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA, partial cds Length = 587 Score = 202 bits (102), Expect = 2e-49 Identities = 129/138 (93%) Strand = Plus / Plus Query: 29 gatgaatggctgaatggggagttcattgccactgtccagcagcgtggcgctgcaatcatc 88 ||||||||||| |||| | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 1 gatgaatggctaaatgcagggttcattgccactgtccagcagcgtggtgctgcaatcatc 60 Query: 89 aaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatccgt 148 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 61 aaagcgaggaagctctccagtgctctctctgctgccagctctgcttgtgaccacatccgt 120 Query: 149 gactgggttctgggaacc 166 || |||||||| |||||| Sbjct: 121 gattgggttctcggaacc 138
>gb|BT016453.1| Zea mays clone Contig286 mRNA sequence Length = 1354 Score = 129 bits (65), Expect = 3e-27 Identities = 140/165 (84%) Strand = Plus / Plus Query: 1 gaagcctgttcgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccac 60 ||||||||||||||| ||||| ||||| || ||||| ||||| || ||||| | || Sbjct: 707 gaagcctgttcgtgagcttgtctctgatgacgagtggcttaatggtgaattcatcacaac 766 Query: 61 tgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgc 120 |||||| |||||||| ||||||||||| |||||||| ||| |||||||||||||||| || Sbjct: 767 tgtccaacagcgtggtgctgcaatcattaaagcgagaaagttctccagtgctctctcggc 826 Query: 121 tgccagctcagcttgtgatcacatccgtgactgggttctgggaac 165 ||| ||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct: 827 tgctagctctgcttgtgaccacattcgtgattgggttcttggaac 871
>gb|AF007581.1|AF007581 Zea mays cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1275 Score = 129 bits (65), Expect = 3e-27 Identities = 140/165 (84%) Strand = Plus / Plus Query: 1 gaagcctgttcgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccac 60 ||||||||||||||| ||||| ||||| || ||||| ||||| || ||||| | || Sbjct: 698 gaagcctgttcgtgagcttgtctctgatgacgagtggcttaatggtgaattcatcacaac 757 Query: 61 tgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgc 120 |||||| |||||||| ||||||||||| |||||||| ||| |||||||||||||||| || Sbjct: 758 tgtccaacagcgtggtgctgcaatcattaaagcgagaaagttctccagtgctctctcggc 817 Query: 121 tgccagctcagcttgtgatcacatccgtgactgggttctgggaac 165 ||| ||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct: 818 tgctagctctgcttgtgaccacattcgtgattgggttcttggaac 862
>gb|AF379609.1|AF379609 Zea mays malate dehydrogenase mRNA, partial cds Length = 529 Score = 117 bits (59), Expect = 1e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctct 118 |||||||| |||||||| ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 13 actgtccaacagcgtggtgctgcaatcattaaagcgagaaagttctccagtgctctctcg 72 Query: 119 gctgccagctcagcttgtgatcacatccgtgactgggttctgggaac 165 ||||| ||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct: 73 gctgctagctctgcttgtgaccacattcgtgattgggttcttggaac 119
>gb|AY109362.1| Zea mays CL1892_2 mRNA sequence Length = 943 Score = 117 bits (59), Expect = 1e-23 Identities = 95/107 (88%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctct 118 |||||||| |||||||| ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 594 actgtccaacagcgtggtgctgcaatcattaaagcgagaaagttctccagtgctctctcg 653 Query: 119 gctgccagctcagcttgtgatcacatccgtgactgggttctgggaac 165 ||||| ||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct: 654 gctgctagctctgcttgtgaccacattcgtgattgggttcttggaac 700
>emb|X96539.1|MCMDH M.crystallinum mRNA for malate dehydrogenase Length = 1273 Score = 113 bits (57), Expect = 2e-22 Identities = 138/165 (83%) Strand = Plus / Plus Query: 2 aagcctgttcgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccact 61 |||||||||||||| |||||| ||||||| |||| ||||||| |||||||| | ||| Sbjct: 708 aagcctgttcgtgagcttgttgctgatgatgcatggttgaatggagagttcataacaact 767 Query: 62 gtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 121 || || |||||||| ||||| |||||||| || ||||||||||||||||| | || ||| Sbjct: 768 gtgcaacagcgtggagctgccatcatcaaggcaaggaagctctccagtgcattgtcagct 827 Query: 122 gccagctcagcttgtgatcacatccgtgactgggttctgggaacc 166 || || || |||||||||||||||| ||| ||||| || |||||| Sbjct: 828 gctagttctgcttgtgatcacatccatgattgggtgcttggaacc 872
>ref|NM_100321.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT1G04410 mRNA, complete cds Length = 1484 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 836 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 895 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 896 gcttgtgaccacatccgtgactgggtccttggaac 930
>gb|AY133655.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds Length = 999 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 691 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 750 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 751 gcttgtgaccacatccgtgactgggtccttggaac 785
>gb|AY081563.1| Arabidopsis thaliana unknown protein (At1g04410) mRNA, complete cds Length = 1223 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 691 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 750 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 751 gcttgtgaccacatccgtgactgggtccttggaac 785
>gb|AY057442.1| Arabidopsis thaliana ecotype Ler cryptochrome 2 (CRY2) gene, complete cds Length = 4649 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 259 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 318 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 319 gcttgtgaccacatccgtgactgggtccttggaac 353
>gb|AY057441.1| Arabidopsis thaliana ecotype Cvi cryptochrome 2 (CRY2) gene, complete cds Length = 4659 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 266 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 325 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 326 gcttgtgaccacatccgtgactgggtccttggaac 360
>gb|AY065134.1| Arabidopsis thaliana unknown protein (At1g04410; F19P19.13) mRNA, complete cds Length = 1314 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 777 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 836 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 837 gcttgtgaccacatccgtgactgggtccttggaac 871
>gb|AY050374.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds Length = 1309 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 773 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 832 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 833 gcttgtgaccacatccgtgactgggtccttggaac 867
>emb|BX815185.1|CNS0ACZH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 541 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 1 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 60 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 61 gcttgtgaccacatccgtgactgggtccttggaac 95
>emb|BX815710.1|CNS0ACSG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 600 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 66 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 125 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 126 gcttgtgaccacatccgtgactgggtccttggaac 160
>gb|AY088023.1| Arabidopsis thaliana clone 40467 mRNA, complete sequence Length = 1351 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 813 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 872 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 873 gcttgtgaccacatccgtgactgggtccttggaac 907
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 107527 Score = 101 bits (51), Expect = 6e-19 Identities = 84/95 (88%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| ||||||||| | || ||||| ||||||||||| ||||| Sbjct: 43298 cgtggagctgcaatcatcaaggcgaggaagttgtctagtgcgctctctgctgctagctct 43357 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||||||||||||||| || ||||| Sbjct: 43358 gcttgtgaccacatccgtgactgggtccttggaac 43392
>ref|NM_197014.1| Oryza sativa (japonica cultivar-group) cytoplasmic malate dehydrogenase (OSJNBa0055P24.3), mRNA Length = 1381 Score = 99.6 bits (50), Expect = 3e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 62 gtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 121 |||||||||||||| || || |||||||| |||||||||| |||||||| || |||||| Sbjct: 780 gtccagcagcgtggtgccgccatcatcaaggcgaggaagcaatccagtgccctatctgct 839 Query: 122 gccagctcagcttgtgatcacatccgtgactgggttct 159 |||||||| || || |||||||| |||||||||||||| Sbjct: 840 gccagctctgcatgcgatcacattcgtgactgggttct 877
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 99.6 bits (50), Expect = 3e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 62 gtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 121 |||||||||||||| || || |||||||| |||||||||| |||||||| || |||||| Sbjct: 17401963 gtccagcagcgtggtgccgccatcatcaaggcgaggaagcaatccagtgccctatctgct 17402022 Query: 122 gccagctcagcttgtgatcacatccgtgactgggttct 159 |||||||| || || |||||||| |||||||||||||| Sbjct: 17402023 gccagctctgcatgcgatcacattcgtgactgggttct 17402060
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 99.6 bits (50), Expect = 3e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 62 gtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 121 |||||||||||||| || || |||||||| |||||||||| |||||||| || |||||| Sbjct: 30958 gtccagcagcgtggtgccgccatcatcaaggcgaggaagcaatccagtgccctatctgct 31017 Query: 122 gccagctcagcttgtgatcacatccgtgactgggttct 159 |||||||| || || |||||||| |||||||||||||| Sbjct: 31018 gccagctctgcatgcgatcacattcgtgactgggttct 31055
>dbj|AK104691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G07, full insert sequence Length = 1326 Score = 99.6 bits (50), Expect = 3e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 62 gtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 121 |||||||||||||| || || |||||||| |||||||||| |||||||| || |||||| Sbjct: 786 gtccagcagcgtggtgccgccatcatcaaggcgaggaagcaatccagtgccctatctgct 845 Query: 122 gccagctcagcttgtgatcacatccgtgactgggttct 159 |||||||| || || |||||||| |||||||||||||| Sbjct: 846 gccagctctgcatgcgatcacattcgtgactgggttct 883
>dbj|AK066396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064D20, full insert sequence Length = 1392 Score = 99.6 bits (50), Expect = 3e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 62 gtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 121 |||||||||||||| || || |||||||| |||||||||| |||||||| || |||||| Sbjct: 791 gtccagcagcgtggtgccgccatcatcaaggcgaggaagcaatccagtgccctatctgct 850 Query: 122 gccagctcagcttgtgatcacatccgtgactgggttct 159 |||||||| || || |||||||| |||||||||||||| Sbjct: 851 gccagctctgcatgcgatcacattcgtgactgggttct 888
>gb|AF353203.1| Oryza sativa cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1371 Score = 99.6 bits (50), Expect = 3e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 62 gtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 121 |||||||||||||| || || |||||||| |||||||||| |||||||| || |||||| Sbjct: 771 gtccagcagcgtggtgccgccatcatcaaggcgaggaagcaatccagtgccctatctgct 830 Query: 122 gccagctcagcttgtgatcacatccgtgactgggttct 159 |||||||| || || |||||||| |||||||||||||| Sbjct: 831 gccagctctgcatgcgatcacattcgtgactgggttct 868
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 99.6 bits (50), Expect = 3e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 62 gtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 121 |||||||||||||| || || |||||||| |||||||||| |||||||| || |||||| Sbjct: 17411003 gtccagcagcgtggtgccgccatcatcaaggcgaggaagcaatccagtgccctatctgct 17411062 Query: 122 gccagctcagcttgtgatcacatccgtgactgggttct 159 |||||||| || || |||||||| |||||||||||||| Sbjct: 17411063 gccagctctgcatgcgatcacattcgtgactgggttct 17411100
>emb|AJ251083.1|BVU251083 Beta vulgaris mRNA for putative malate dehydrogenase (nr1 gene) Length = 999 Score = 97.6 bits (49), Expect = 1e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 26 gatgatgaatggctgaatggggagttcattgccactgtccagcagcgtggcgctgcaatc 85 ||||||| |||| | ||||| |||||||| | ||||| || || ||||| ||||| ||| Sbjct: 646 gatgatgcatggttaaatggagagttcataacaactgtgcaacaacgtggtgctgccatc 705 Query: 86 atcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatc 145 |||||||| |||||||| ||||||||| | || ||||| || || ||||||||||||||| Sbjct: 706 atcaaagcaaggaagctttccagtgctttgtcagctgctagttctgcttgtgatcacatc 765 Query: 146 cgtgactgggttctgggaacc 166 ||||| ||||| || |||||| Sbjct: 766 cgtgattgggtgcttggaacc 786
>emb|AJ843126.1| Plantago major mRNA for malate dehydrogenase (mdh1 gene) Length = 1353 Score = 97.6 bits (49), Expect = 1e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 5 cctgttcgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccactgtc 64 ||||||||||| |||||| ||||| ||||| ||||| ||||||||| | |||||| Sbjct: 688 cctgttcgtgagcttgttgctgatgaccaatggttgaataccgagttcatttcaactgtc 747 Query: 65 cagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgcc 124 ||||||||||| ||||| || ||||| || |||||| | || |||||||| |||||||| Sbjct: 748 cagcagcgtggtgctgccattatcaaggctaggaagttttctagtgctctttctgctgct 807 Query: 125 agctcagcttgtgatcacatccgtgactgggttctgggaac 165 ||||| |||||||| ||||| ||||| ||||| ||||||| Sbjct: 808 agctctgcttgtgaccacattcgtgattgggtcttgggaac 848
>gb|DQ225182.1| Lycopersicon chilense malate dehydrogenase mRNA, complete cds Length = 1005 Score = 95.6 bits (48), Expect = 4e-17 Identities = 135/164 (82%) Strand = Plus / Plus Query: 2 aagcctgttcgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccact 61 ||||| || |||||||||||| ||||||| |||| |||| || ||||||||| | ||| Sbjct: 628 aagccagtccgtgaacttgttgctgatgatgcatggttgaacggtgagttcatttctact 687 Query: 62 gtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 121 || |||||| | || ||||| || |||||||| || ||||| || ||||| ||||| ||| Sbjct: 688 gtacagcagaggggtgctgccattatcaaagctagaaagctttctagtgccctctccgct 747 Query: 122 gccagctcagcttgtgatcacatccgtgactgggttctgggaac 165 || || || |||||||||||||| ||||||||||| || ||||| Sbjct: 748 gctagttctgcttgtgatcacattcgtgactgggtccttggaac 791
>gb|AF367442.1| Prunus persica clone Mdh1 NAD-dependent malate dehydrogenase (mdh1) mRNA, complete cds Length = 1491 Score = 81.8 bits (41), Expect = 6e-13 Identities = 131/161 (81%) Strand = Plus / Plus Query: 6 ctgttcgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccactgtcc 65 |||||||||| |||||| ||||||| |||| ||| || || |||||| ||||||| | Sbjct: 626 ctgttcgtgagcttgttgctgatgatgcatggttgaccggagaattcattaccactgttc 685 Query: 66 agcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgcca 125 | || ||||| |||||||||||||| || | ||||| ||||| || | |||||||| | Sbjct: 686 aacaacgtggtgctgcaatcatcaaggctcgtaagctgtccagggcattatctgctgcta 745 Query: 126 gctcagcttgtgatcacatccgtgactgggttctgggaacc 166 |||| |||||||||||||| ||||| ||||| || |||||| Sbjct: 746 gctctgcttgtgatcacattcgtgattgggtacttggaacc 786
>gb|AF459645.1| Lupinus albus malate dehydrogenase (MDH1) mRNA, complete cds Length = 1290 Score = 79.8 bits (40), Expect = 2e-12 Identities = 133/164 (81%) Strand = Plus / Plus Query: 2 aagcctgttcgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccact 61 ||||||||||||||||||||| ||||||| |||| ||||| ||| ||||| || ||| Sbjct: 674 aagcctgttcgtgaacttgttgctgatgatgcatggttgaattcggaattcatagctact 733 Query: 62 gtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgct 121 ||||| || ||||| |||||||| || ||||| || ||||| || ||||| || |||||| Sbjct: 734 gtccaacaacgtggtgctgcaattattaaagctagaaagctttcaagtgcactatctgct 793 Query: 122 gccagctcagcttgtgatcacatccgtgactgggttctgggaac 165 || || | |||||||| ||||| | || |||||||| ||||| Sbjct: 794 gctagtgctgcttgtgaccacattagagattgggttcttggaac 837
>emb|BX841818.1|CNS09Y6C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1075 Score = 75.8 bits (38), Expect = 4e-11 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| |||||||||||||| |||||| || | || ||||| ||||||||||| ||||| Sbjct: 762 cgtggagctgcaatcatcaaggcgagggagttgtctagtgcgctctctgctgctagctct 821 Query: 131 gctt-gtgatcacatccgtgactggg 155 |||| |||| |||||||||||||||| Sbjct: 822 gcttggtgaccacatccgtgactggg 847
>gb|DQ294258.1| Solanum tuberosum clone 093D06 malate dehydrogenase-like protein mRNA, complete cds Length = 1220 Score = 71.9 bits (36), Expect = 6e-10 Identities = 114/140 (81%) Strand = Plus / Plus Query: 26 gatgatgaatggctgaatggggagttcattgccactgtccagcagcgtggcgctgcaatc 85 ||||||| |||| |||| || ||||||||| | ||||| |||||| | || ||||| || Sbjct: 682 gatgatgcatggttgaacggtgagttcatttctactgtacagcagaggggtgctgccatt 741 Query: 86 atcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatc 145 ||||| || || ||||| || ||||| || || ||||| || || |||||||||||||| Sbjct: 742 atcaaggctagaaagctttctagtgccctttccgctgctagttctgcttgtgatcacatt 801 Query: 146 cgtgactgggttctgggaac 165 ||||||||||| || ||||| Sbjct: 802 cgtgactgggtccttggaac 821
>emb|AJ299256.1|NTA299256 Nicotiana tabacum mRNA for malate dehydrogenase (md1 gene) Length = 1328 Score = 65.9 bits (33), Expect = 4e-08 Identities = 132/165 (80%) Strand = Plus / Plus Query: 1 gaagcctgttcgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccac 60 |||||| || ||||||||||| ||||||| |||| ||||||| ||||||||| | || Sbjct: 676 gaagccagtccgtgaacttgtggctgatgatgcatggttgaatggtgagttcatttctac 735 Query: 61 tgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgc 120 ||| |||||| | || ||||| || ||||| || || ||||| || || || || || || Sbjct: 736 tgtacagcagaggggtgctgccattatcaaggctagaaagctttctagcgccctttccgc 795 Query: 121 tgccagctcagcttgtgatcacatccgtgactgggttctgggaac 165 ||| || || |||||||||||||| ||||| ||||| || ||||| Sbjct: 796 tgctagttctgcttgtgatcacatacgtgattgggtccttggaac 840
>emb|AJ299059.1|CAR299059 Cicer arietinum mRNA for cytosolic malate dehydrogenase (ORF1), clone CanCMDH Length = 1399 Score = 65.9 bits (33), Expect = 4e-08 Identities = 132/165 (80%) Strand = Plus / Plus Query: 1 gaagcctgttcgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccac 60 ||||||||| |||||||||||| ||||||| ||| |||||||||| ||||| | || Sbjct: 687 gaagcctgtccgtgaacttgtttctgatgatgcctggttgaatggggaattcataccaac 746 Query: 61 tgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgc 120 ||| || || ||||| |||||||| ||||| || || ||| | || ||||| || ||||| Sbjct: 747 tgttcaacaacgtggtgctgcaattatcaaggctagaaagttgtcaagtgcactatctgc 806 Query: 121 tgccagctcagcttgtgatcacatccgtgactgggttctgggaac 165 ||| || | |||||||| ||||| || || |||||||| ||||| Sbjct: 807 tgctagtgctgcttgtgaccacattcgcgattgggttcttggaac 851
>gb|AY161295.1| Danio rerio cytosolic malate dehydrogenase B (mdhB) mRNA, complete cds Length = 1048 Score = 65.9 bits (33), Expect = 4e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 35 tggctgaatggggagttcattgccactgtccagcagcgtggcgctgcaatcatcaaagcg 94 |||||||| || || |||||| | || || ||||||||||| |||||| |||||||||| Sbjct: 674 tggctgaagggagaattcatttctacggtgcagcagcgtggtgctgcagtcatcaaagcc 733 Query: 95 aggaagctctccagtgc 111 ||||| ||||||||||| Sbjct: 734 aggaaactctccagtgc 750
>ref|NM_199969.1| Danio rerio malate dehydrogenase 1b, NAD (soluble) (mdh1b), mRNA Length = 1751 Score = 65.9 bits (33), Expect = 4e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 35 tggctgaatggggagttcattgccactgtccagcagcgtggcgctgcaatcatcaaagcg 94 |||||||| || || |||||| | || || ||||||||||| |||||| |||||||||| Sbjct: 786 tggctgaagggagaattcatttctacggtgcagcagcgtggtgctgcagtcatcaaagcc 845 Query: 95 aggaagctctccagtgc 111 ||||| ||||||||||| Sbjct: 846 aggaaactctccagtgc 862
>gb|BC071512.1| Danio rerio malate dehydrogenase 1b, NAD (soluble), mRNA (cDNA clone MGC:86883 IMAGE:6904389), complete cds Length = 1604 Score = 65.9 bits (33), Expect = 4e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 35 tggctgaatggggagttcattgccactgtccagcagcgtggcgctgcaatcatcaaagcg 94 |||||||| || || |||||| | || || ||||||||||| |||||| |||||||||| Sbjct: 687 tggctgaagggagaattcatttctacggtgcagcagcgtggtgctgcagtcatcaaagcc 746 Query: 95 aggaagctctccagtgc 111 ||||| ||||||||||| Sbjct: 747 aggaaactctccagtgc 763
>gb|BC050508.1| Danio rerio malate dehydrogenase 1b, NAD (soluble), mRNA (cDNA clone MGC:56234 IMAGE:5601379), complete cds Length = 1751 Score = 65.9 bits (33), Expect = 4e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 35 tggctgaatggggagttcattgccactgtccagcagcgtggcgctgcaatcatcaaagcg 94 |||||||| || || |||||| | || || ||||||||||| |||||| |||||||||| Sbjct: 786 tggctgaagggagaattcatttctacggtgcagcagcgtggtgctgcagtcatcaaagcc 845 Query: 95 aggaagctctccagtgc 111 ||||| ||||||||||| Sbjct: 846 aggaaactctccagtgc 862
>gb|AY496910.1| Glycine max cytosolic malate dehydrogenase mRNA, complete cds Length = 1312 Score = 63.9 bits (32), Expect = 1e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 26 gatgatgaatggctgaatggggagttcattgccactgtccagcagcgtggcgctgcaatc 85 ||||||| ||| |||||||||| |||||| | ||||| || || |||||||||||||| Sbjct: 698 gatgatgcctggttgaatggggaattcattactactgttcaacaacgtggcgctgcaatt 757 Query: 86 atcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatc 145 |||||||| || ||||| || ||||| || || ||||| || | |||||||| || || Sbjct: 758 atcaaagctagaaagctttcaagtgcactatcagctgctagtgctgcttgtgaccatatt 817 Query: 146 cgtgactgggttctgggaac 165 | ||||||||||| ||||| Sbjct: 818 agagactgggttcttggaac 837
>emb|AM040268.1| Capsicum chinense partial mRNA for cytosolic malate dehydrogenase (mdh gene) Length = 773 Score = 63.9 bits (32), Expect = 1e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 26 gatgatgaatggctgaatggggagttcattgccactgtccagcagcgtggcgctgcaatc 85 ||||||| |||| |||| || ||||||||| | ||||| |||||| | || ||||| || Sbjct: 199 gatgatgcatggttgaacggtgagttcattactactgtacagcagaggggtgctgccatt 258 Query: 86 atcaaagcgaggaagctctccagtgctctctctgctgccagctcagcttgtgatcacatc 145 ||||| || || ||||| || || ||||| |||||||| || || |||||||||||||| Sbjct: 259 atcaaggctagaaagctttctagcgctctttctgctgctagttctgcttgtgatcacatt 318 Query: 146 cgtgactgggttctgggaac 165 || || ||||| || ||||| Sbjct: 319 cgcgattgggtccttggaac 338
>ref|NM_123699.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT5G43330 mRNA, complete cds Length = 1308 Score = 61.9 bits (31), Expect = 6e-07 Identities = 73/87 (83%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| ||||| || ||||| || |||||||| || ||||| || ||||| || |||||| Sbjct: 810 cgtggtgctgccattatcaaggccaggaagctgtctagtgcactttctgcagctagctca 869 Query: 131 gcttgtgatcacatccgtgactgggtt 157 |||||||| || |||||||| |||||| Sbjct: 870 gcttgtgaccatatccgtgattgggtt 896
>gb|AY091220.1| Arabidopsis thaliana putative cytosolic malate dehydrogenase (At5g43330) mRNA, complete cds Length = 1030 Score = 61.9 bits (31), Expect = 6e-07 Identities = 73/87 (83%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| ||||| || ||||| || |||||||| || ||||| || ||||| || |||||| Sbjct: 691 cgtggtgctgccattatcaaggccaggaagctgtctagtgcactttctgcagctagctca 750 Query: 131 gcttgtgatcacatccgtgactgggtt 157 |||||||| || |||||||| |||||| Sbjct: 751 gcttgtgaccatatccgtgattgggtt 777
>gb|AY072137.1| Arabidopsis thaliana putative cytosolic malate dehydrogenase (At5g43330) mRNA, complete cds Length = 1198 Score = 61.9 bits (31), Expect = 6e-07 Identities = 73/87 (83%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| ||||| || ||||| || |||||||| || ||||| || ||||| || |||||| Sbjct: 764 cgtggtgctgccattatcaaggccaggaagctgtctagtgcactttctgcagctagctca 823 Query: 131 gcttgtgatcacatccgtgactgggtt 157 |||||||| || |||||||| |||||| Sbjct: 824 gcttgtgaccatatccgtgattgggtt 850
>gb|AY087986.1| Arabidopsis thaliana clone 40174 mRNA, complete sequence Length = 1239 Score = 61.9 bits (31), Expect = 6e-07 Identities = 73/87 (83%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| ||||| || ||||| || |||||||| || ||||| || ||||| || |||||| Sbjct: 764 cgtggtgctgccattatcaaggccaggaagctgtctagtgcactttctgcagctagctca 823 Query: 131 gcttgtgatcacatccgtgactgggtt 157 |||||||| || |||||||| |||||| Sbjct: 824 gcttgtgaccatatccgtgattgggtt 850
>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20 Length = 91193 Score = 61.9 bits (31), Expect = 6e-07 Identities = 73/87 (83%) Strand = Plus / Plus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| ||||| || ||||| || |||||||| || ||||| || ||||| || |||||| Sbjct: 6962 cgtggtgctgccattatcaaggccaggaagctgtctagtgcactttctgcagctagctca 7021 Query: 131 gcttgtgatcacatccgtgactgggtt 157 |||||||| || |||||||| |||||| Sbjct: 7022 gcttgtgaccatatccgtgattgggtt 7048
>emb|CR352220.19| Zebrafish DNA sequence from clone DKEY-148F10 in linkage group 17, complete sequence Length = 174580 Score = 61.9 bits (31), Expect = 6e-07 Identities = 43/47 (91%) Strand = Plus / Plus Query: 65 cagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgc 111 ||||||||||| |||||| |||||||||| ||||| ||||||||||| Sbjct: 1311 cagcagcgtggtgctgcagtcatcaaagccaggaaactctccagtgc 1357
>ref|XM_681988.1| PREDICTED: Danio rerio similar to cytosolic malate dehydrogenase B (LOC572887), mRNA Length = 1558 Score = 58.0 bits (29), Expect = 9e-06 Identities = 65/77 (84%) Strand = Plus / Plus Query: 35 tggctgaatggggagttcattgccactgtccagcagcgtggcgctgcaatcatcaaagcg 94 |||||||| || || |||||| | || || |||||||| || |||||| |||||||||| Sbjct: 662 tggctgaagggagaattcatttctacggtgcagcagcgaggtgctgcagtcatcaaagcc 721 Query: 95 aggaagctctccagtgc 111 ||||| ||||||||||| Sbjct: 722 aggaaactctccagtgc 738
>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence Length = 87839 Score = 54.0 bits (27), Expect = 1e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||| ||||||||||| ||||| | ||||| || ||||| | |||||||| ||||| Sbjct: 7278 cgtggtgctgcaatcattaaagcacgaaagctttcaagtgcattatctgctgctagctct 7219 Query: 131 gcttgtgatcacatccgtgactgggttctgggaac 165 |||||||| ||||| | ||| |||||||| ||||| Sbjct: 7218 gcttgtgaccacattcatgattgggttcttggaac 7184
>emb|AL929560.14| Zebrafish DNA sequence from clone CH211-241O15 in linkage group 17, complete sequence Length = 103820 Score = 54.0 bits (27), Expect = 1e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 65 cagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgc 111 |||||||| || |||||| |||||||||| ||||| ||||||||||| Sbjct: 85089 cagcagcgaggtgctgcagtcatcaaagccaggaaactctccagtgc 85043
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 46.1 bits (23), Expect = 0.033 Identities = 23/23 (100%) Strand = Plus / Minus Query: 71 cgtggcgctgcaatcatcaaagc 93 ||||||||||||||||||||||| Sbjct: 2511250 cgtggcgctgcaatcatcaaagc 2511228
>gb|DQ004558.1| Oreochromis mossambicus malate dehydrogenase A (MdhA) mRNA, partial cds Length = 457 Score = 46.1 bits (23), Expect = 0.033 Identities = 41/47 (87%) Strand = Plus / Plus Query: 65 cagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgc 111 ||||||||||| ||||| ||||||| || |||||||| |||||||| Sbjct: 178 cagcagcgtggtgctgctgtcatcaaggccaggaagctgtccagtgc 224
>emb|CR675000.2|CNS0FJSU Tetraodon nigroviridis full-length cDNA Length = 1072 Score = 44.1 bits (22), Expect = 0.13 Identities = 52/62 (83%) Strand = Plus / Plus Query: 47 gagttcattgccactgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctcc 106 |||||||| |||||||||||||| | || || || ||||||| ||||||||||| ||| Sbjct: 467 gagttcatcaccactgtccagcagagaggtgcagcggtcatcaaggcgaggaagctgtcc 526 Query: 107 ag 108 || Sbjct: 527 ag 528
>gb|AC140228.3| Mus musculus BAC clone RP24-488C4 from 10, complete sequence Length = 137705 Score = 44.1 bits (22), Expect = 0.13 Identities = 22/22 (100%) Strand = Plus / Plus Query: 104 tccagtgctctctctgctgcca 125 |||||||||||||||||||||| Sbjct: 67970 tccagtgctctctctgctgcca 67991
>gb|L41699.1|PS300585E Eucalyptus globulus bicostata symbiont (F00064) mRNA, ESTun585 Length = 194 Score = 44.1 bits (22), Expect = 0.13 Identities = 106/134 (79%) Strand = Plus / Plus Query: 11 cgtgaacttgttcaagatgatgaatggctgaatggggagttcattgccactgtccagcag 70 ||||||||||| | ||||||| |||| | || || || |||||| | || ||||| || Sbjct: 61 cgtgaacttgtcaaggatgatgcatggttcaacggagaattcatttctacggtccaacaa 120 Query: 71 cgtggcgctgcaatcatcaaagcgaggaagctctccagtgctctctctgctgccagctca 130 ||||||| ||| || | ||||| |||||||| || ||||| || ||||||||||| | Sbjct: 121 cgtggcgttgccattaataaagctaggaagctttcaagtgcactttctgctgccagtgct 180 Query: 131 gcttgtgatcacat 144 |||||||| ||||| Sbjct: 181 gcttgtgaccacat 194
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 42.1 bits (21), Expect = 0.52 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgctgccagctcagcttgtga 138 ||||||||||||||||||||| Sbjct: 593952 tgctgccagctcagcttgtga 593932
>gb|BC059124.1| Rattus norvegicus malate dehydrogenase 1, NAD (soluble), mRNA (cDNA clone MGC:72755 IMAGE:6921518), complete cds Length = 1312 Score = 42.1 bits (21), Expect = 0.52 Identities = 45/53 (84%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgc 111 ||||| ||||||||||| ||||| ||||||| || ||||||| |||||||| Sbjct: 755 actgtgcagcagcgtggtgctgctgtcatcaaggctcggaagctgtccagtgc 807
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 0.52 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 ctgtccagcagcgtggcgctg 80 ||||||||||||||||||||| Sbjct: 3060447 ctgtccagcagcgtggcgctg 3060467 Score = 38.2 bits (19), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 140 cacatccgtgactgggttctggg 162 ||||||||||||||||| ||||| Sbjct: 1162035 cacatccgtgactgggtgctggg 1162057
>ref|XM_572644.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI02140) partial mRNA Length = 6132 Score = 42.1 bits (21), Expect = 0.52 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tgctgccagctcagcttgtga 138 ||||||||||||||||||||| Sbjct: 3447 tgctgccagctcagcttgtga 3427
>emb|AJ250843.1|MSQ250843 Mantoniella squamata mRNA for cytosolic malate dehydrogenase (nad-MDH gene) Length = 1077 Score = 42.1 bits (21), Expect = 0.52 Identities = 39/45 (86%) Strand = Plus / Plus Query: 44 ggggagttcattgccactgtccagcagcgtggcgctgcaatcatc 88 ||||||||||| ||||| || |||||||| ||||| || |||||| Sbjct: 658 ggggagttcatcgccaccgtgcagcagcgcggcgccgccatcatc 702
>ref|NM_033235.1| Rattus norvegicus malate dehydrogenase 1, NAD (soluble) (Mdh1), mRNA Length = 1266 Score = 42.1 bits (21), Expect = 0.52 Identities = 45/53 (84%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgc 111 ||||| ||||||||||| ||||| ||||||| || ||||||| |||||||| Sbjct: 714 actgtgcagcagcgtggtgctgctgtcatcaaggctcggaagctgtccagtgc 766
>gb|AF093773.1|AF093773 Rattus norvegicus cytosolic malate dehydrogenase (Mdh) mRNA, complete cds Length = 1266 Score = 42.1 bits (21), Expect = 0.52 Identities = 45/53 (84%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaaagcgaggaagctctccagtgc 111 ||||| ||||||||||| ||||| ||||||| || ||||||| |||||||| Sbjct: 714 actgtgcagcagcgtggtgctgctgtcatcaaggctcggaagctgtccagtgc 766
>ref|NM_005917.2| Homo sapiens malate dehydrogenase 1, NAD (soluble) (MDH1), mRNA Length = 1268 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 732 actgtgcagcagcgtggcgctgctgtcatcaa 763
>gb|BC001484.2| Homo sapiens malate dehydrogenase 1, NAD (soluble), mRNA (cDNA clone MGC:1375 IMAGE:3505345), complete cds Length = 1286 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 732 actgtgcagcagcgtggcgctgctgtcatcaa 763
>emb|AL023592.1|SPCC550 S.pombe chromosome III cosmid c550 Length = 38475 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gttcgtgaacttgttcaaga 27 |||||||||||||||||||| Sbjct: 8796 gttcgtgaacttgttcaaga 8815
>emb|BX641152.1|HSM807171 Homo sapiens mRNA; cDNA DKFZp686I13109 (from clone DKFZp686I13109) Length = 8703 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tgctctctctgctgccagct 128 |||||||||||||||||||| Sbjct: 3694 tgctctctctgctgccagct 3713
>gb|AC114399.2| Homo sapiens chromosome 3 clone RP11-1019A2, complete sequence Length = 180948 Score = 40.1 bits (20), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 gctctctctgctgccagctcagct 133 |||||||||||| ||||||||||| Sbjct: 93214 gctctctctgctcccagctcagct 93237
>emb|CR622929.1| full-length cDNA clone CS0DC020YF01 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1225 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 750 actgtgcagcagcgtggcgctgctgtcatcaa 781
>emb|CR619426.1| full-length cDNA clone CS0DI002YM05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 717 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 178 actgtgcagcagcgtggcgctgctgtcatcaa 209
>emb|CR609240.1| full-length cDNA clone CS0DC013YO22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1257 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 743 actgtgcagcagcgtggcgctgctgtcatcaa 774
>emb|CR606360.1| full-length cDNA clone CS0DJ015YM22 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1256 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 750 actgtgcagcagcgtggcgctgctgtcatcaa 781
>emb|CR603513.1| full-length cDNA clone CS0DC017YG07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1233 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 725 actgtgcagcagcgtggcgctgctgtcatcaa 756
>emb|CR598586.1| full-length cDNA clone CS0DJ013YB20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1258 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 750 actgtgcagcagcgtggcgctgctgtcatcaa 781
>emb|CR594032.1| full-length cDNA clone CS0DB003YN14 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1231 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 725 actgtgcagcagcgtggcgctgctgtcatcaa 756
>gb|AC104663.3| Homo sapiens BAC clone RP11-713M6 from 4, complete sequence Length = 137625 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 atgaatggctgaatggggag 49 |||||||||||||||||||| Sbjct: 54995 atgaatggctgaatggggag 55014
>emb|CR457405.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0714D for gene MDH1, malate dehydrogenase 1, NAD (soluble); complete cds, incl. stopcodon Length = 1005 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 676 actgtgcagcagcgtggcgctgctgtcatcaa 707
>ref|NM_001023088.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC550.05), partial mRNA Length = 612 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gttcgtgaacttgttcaaga 27 |||||||||||||||||||| Sbjct: 94 gttcgtgaacttgttcaaga 113
>dbj|AB208182.1| Elephas maximus DNA, AfroSINE locus Ma158 Length = 518 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 aggaagctctccagtgctct 114 |||||||||||||||||||| Sbjct: 132 aggaagctctccagtgctct 113
>dbj|AB208181.1| Loxodonta africana DNA, AfroSINE locus Ma158 Length = 518 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 aggaagctctccagtgctct 114 |||||||||||||||||||| Sbjct: 132 aggaagctctccagtgctct 113
>dbj|D55654.1|HUMCMD Homo sapiens mRNA for cytosolic malate dehydrogenase, complete cds Length = 1267 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 731 actgtgcagcagcgtggcgctgctgtcatcaa 762
>gb|AC016734.7| Homo sapiens BAC clone RP11-391A7 from 2, complete sequence Length = 218836 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 142204 actgtgcagcagcgtggcgctgctgtcatcaa 142235
>gb|AC063926.36| Homo sapiens 12 BAC RP11-117L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192774 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 tgctctctctgctgccagct 128 |||||||||||||||||||| Sbjct: 157437 tgctctctctgctgccagct 157456
>emb|AL928704.10| Mouse DNA sequence from clone RP23-393G10 on chromosome 2, complete sequence Length = 171715 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 agcctgttcgtgaacttgtt 22 |||||||||||||||||||| Sbjct: 152500 agcctgttcgtgaacttgtt 152481
>gb|AY725475.1| Lycopersicon esculentum cytosolic malate dehydrogenase (cMDH) mRNA, complete cds Length = 1005 Score = 40.1 bits (20), Expect = 2.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 tctgctgccagctcagcttgtgatcacatccgtgactgggttct 159 ||||| || ||||||||||||||||| || | ||| |||||||| Sbjct: 742 tctgcagctagctcagcttgtgatcatatacatgattgggttct 785
>gb|AF075269.1|AF075269 Simian immunodeficiency virus strain SIVlhoest, complete genome Length = 9957 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tctccagtgctctctctgct 121 |||||||||||||||||||| Sbjct: 2519 tctccagtgctctctctgct 2500
>dbj|AP004609.1| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-158I9, complete sequence Length = 195409 Score = 40.1 bits (20), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gaagctctccagtgctctctctgc 120 ||||||||||||| |||||||||| Sbjct: 130793 gaagctctccagtcctctctctgc 130816
>dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-110I1, complete sequence Length = 178341 Score = 40.1 bits (20), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gaagctctccagtgctctctctgc 120 ||||||||||||| |||||||||| Sbjct: 4855 gaagctctccagtcctctctctgc 4878
>gb|U20352.1|HSU20352 Homo sapiens malate dehydrogenase (MDHA) mRNA, complete cds Length = 1213 Score = 40.1 bits (20), Expect = 2.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 59 actgtccagcagcgtggcgctgcaatcatcaa 90 ||||| ||||||||||||||||| ||||||| Sbjct: 676 actgtgcagcagcgtggcgctgctgtcatcaa 707
>ref|NM_105184.1| Arabidopsis thaliana cysteine-type endopeptidase/ nucleic acid binding / ubiquitin thiolesterase/ zinc ion binding AT1G65110 mRNA, complete cds Length = 3285 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 tgaacttgttcaagatgat 31 ||||||||||||||||||| Sbjct: 680 tgaacttgttcaagatgat 662
>gb|AC160126.2| Mus musculus BAC clone RP23-295C1 from chromosome 13, complete sequence Length = 212570 Score = 38.2 bits (19), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 101 ctctccagtgctctctctgctgc 123 ||||||||| ||||||||||||| Sbjct: 13986 ctctccagtcctctctctgctgc 14008
>gb|AC132278.3| Mus musculus BAC clone RP24-346C20 from chromosome 8, complete sequence Length = 154524 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 ctccagtgctctctctgct 121 ||||||||||||||||||| Sbjct: 35631 ctccagtgctctctctgct 35649
>gb|BC051627.1| Danio rerio zgc:56685, mRNA (cDNA clone MGC:56685 IMAGE:6033897), complete cds Length = 2529 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 111 ctctctctgctgccagctc 129 ||||||||||||||||||| Sbjct: 1300 ctctctctgctgccagctc 1318
>ref|NM_201202.1| Danio rerio zgc:56685 (zgc:56685), mRNA Length = 2529 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 111 ctctctctgctgccagctc 129 ||||||||||||||||||| Sbjct: 1300 ctctctctgctgccagctc 1318
>gb|AC104868.8| Mus musculus chromosome 1, clone RP24-532K6, complete sequence Length = 182376 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 100 gctctccagtgctctctct 118 ||||||||||||||||||| Sbjct: 169616 gctctccagtgctctctct 169634
>ref|XM_754053.1| Ustilago maydis 521 hypothetical protein (UM02999.1) partial mRNA Length = 810 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 catccgtgactgggttctg 160 ||||||||||||||||||| Sbjct: 36 catccgtgactgggttctg 54
>ref|XM_817630.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.2450) partial mRNA Length = 729 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 catccgtgactgggttctg 160 ||||||||||||||||||| Sbjct: 30 catccgtgactgggttctg 48
>gb|AC124389.4| Mus musculus BAC clone RP24-429G21 from chromosome 1, complete sequence Length = 183428 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 aggaagctctccagtgctc 113 ||||||||||||||||||| Sbjct: 108359 aggaagctctccagtgctc 108341
>gb|AC122267.4| Mus musculus BAC clone RP23-214H6 from 8, complete sequence Length = 214619 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 ctccagtgctctctctgct 121 ||||||||||||||||||| Sbjct: 213381 ctccagtgctctctctgct 213399
>gb|AC107862.10| Mus musculus chromosome 7, clone RP23-378D16, complete sequence Length = 188701 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 117 ctgctgccagctcagcttg 135 ||||||||||||||||||| Sbjct: 34930 ctgctgccagctcagcttg 34912
>gb|AC115755.8| Mus musculus chromosome 15, clone RP23-47L17, complete sequence Length = 123355 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 108 gtgctctctctgctgccag 126 ||||||||||||||||||| Sbjct: 114901 gtgctctctctgctgccag 114883
>emb|AL732548.9| Mouse DNA sequence from clone RP24-145P21 on chromosome 4 Contains a novel gene, the Slc31a1 gene for solute carrier family 31 member 1, the 5' end of a novel gene and a CpG island, complete sequence Length = 100074 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 ccagtgctctctctgctgc 123 ||||||||||||||||||| Sbjct: 77769 ccagtgctctctctgctgc 77787
>gb|AE011730.1| Xanthomonas axonopodis pv. citri str. 306, section 108 of 469 of the complete genome Length = 10730 Score = 38.2 bits (19), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 140 cacatccgtgactgggttctggg 162 ||||||||||||||||| ||||| Sbjct: 4064 cacatccgtgactgggtgctggg 4086
>gb|AF307970.1|AF307970 Odocoileus hemionus E-selectin mRNA, complete cds Length = 1653 Score = 38.2 bits (19), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 31 tgaatggctgaatggggagttca 53 |||||||||||||| |||||||| Sbjct: 338 tgaatggctgaatgtggagttca 316
>gb|AC159549.11| Mus musculus 6 BAC RP23-304D1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 236543 Score = 38.2 bits (19), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 gctgaatggggagttcattgcca 59 |||||||||| |||||||||||| Sbjct: 32022 gctgaatgggaagttcattgcca 32000
>gb|AC007339.8| Homo sapiens chromosome 16 clone RP11-305A7, complete sequence Length = 183646 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 tgatgaatggctgaatggg 46 ||||||||||||||||||| Sbjct: 42519 tgatgaatggctgaatggg 42501
>gb|AC027348.8| Homo sapiens chromosome 16 clone CTD-2595P9, complete sequence Length = 147454 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 tgatgaatggctgaatggg 46 ||||||||||||||||||| Sbjct: 89348 tgatgaatggctgaatggg 89330
>gb|AC116764.10| Mus musculus chromosome 15, clone RP23-388P12, complete sequence Length = 217156 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 108 gtgctctctctgctgccag 126 ||||||||||||||||||| Sbjct: 27211 gtgctctctctgctgccag 27193
>gb|AC117622.10| Mus musculus chromosome 5, clone RP23-114L5, complete sequence Length = 185368 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 atgatgaatggctgaatgg 45 ||||||||||||||||||| Sbjct: 86114 atgatgaatggctgaatgg 86096
>gb|AC155947.8| Mus musculus 6 BAC RP24-417N21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 156871 Score = 38.2 bits (19), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 gctgaatggggagttcattgcca 59 |||||||||| |||||||||||| Sbjct: 107113 gctgaatgggaagttcattgcca 107091
>gb|AC155945.4| Mus musculus 6 BAC RP24-466A6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162561 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 tgaacttgttcaagatgat 31 ||||||||||||||||||| Sbjct: 119101 tgaacttgttcaagatgat 119083
>gb|AF152920.1|AF152920 Nitrogen-fixing bacterium SM1 molybdenum dinitrogenase alpha subunit (nifD) gene, partial cds Length = 492 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 catccgtgactgggttctg 160 ||||||||||||||||||| Sbjct: 399 catccgtgactgggttctg 417
>gb|AF152919.1|AF152919 Nitrogen-fixing bacterium SM2 molybdenum dinitrogenase alpha subunit (nifD) gene, partial cds Length = 484 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 catccgtgactgggttctg 160 ||||||||||||||||||| Sbjct: 399 catccgtgactgggttctg 417
>gb|AC007230.2|T23K8 Arabidopsis thaliana chromosome 1 BAC T23K8 sequence, complete sequence Length = 53090 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 tgaacttgttcaagatgat 31 ||||||||||||||||||| Sbjct: 6520 tgaacttgttcaagatgat 6538
>emb|CR925754.15| Zebrafish DNA sequence from clone CH211-148J16 in linkage group 6, complete sequence Length = 150312 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 111 ctctctctgctgccagctc 129 ||||||||||||||||||| Sbjct: 73952 ctctctctgctgccagctc 73934
>dbj|AP001274.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-840J5, complete sequence Length = 210282 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 ctccagtgctctctctgct 121 ||||||||||||||||||| Sbjct: 151105 ctccagtgctctctctgct 151123
>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete sequence Length = 231247 Score = 38.2 bits (19), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 101 ctctccagtgctctctctgctgc 123 ||||||||| ||||||||||||| Sbjct: 68536 ctctccagtcctctctctgctgc 68558 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,470,488 Number of Sequences: 3902068 Number of extensions: 1470488 Number of successful extensions: 110564 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110245 Number of HSP's gapped (non-prelim): 314 length of query: 166 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 144 effective length of database: 17,147,199,772 effective search space: 2469196767168 effective search space used: 2469196767168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
