ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal33l05 |
|---|---|
| Clone Library Name | barley_pub |
>VATI1_TREPA (O83444) V-type ATP synthase subunit I 1 (EC 3.6.3.14) (V-type| ATPase subunit I 1) Length = 622 Score = 33.5 bits (75), Expect = 0.59 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%) Frame = +2 Query: 161 AVFHQSFLLGGLAKLILGDVLKEGTQLSINPLVLWAWAGLLINAINSIPAGELDGGRIAL 340 A F +LGG+ ++L ++ + +V AG ++N I R+++ Sbjct: 459 AEFGSLLMLGGMYVVVLNLIVDKERYPLTGMIVGSIIAGFVLNFI-------FVNYRVSV 511 Query: 341 AMWGRKVSSRLGSVTIALLGLSSLFSDVAFYWAVLIFFLQRGPIAPLSEEITEP--ENSY 514 + V+ + +V ALLG+ ++F+DV Y + L G I+ E+T P N Sbjct: 512 R---QSVADSMKNVINALLGIVNVFADVMSYIRLWAVGLAGGAISATVNEMTHPLFANFL 568 Query: 515 IGLGVAILFLG 547 LG+ +L G Sbjct: 569 AFLGIVLLLFG 579
>UBP35_HUMAN (Q9P2H5) Ubiquitin carboxyl-terminal hydrolase 35 (EC 3.1.2.15)| (Ubiquitin thioesterase 35) (Ubiquitin-specific-processing protease 35) (Deubiquitinating enzyme 35) Length = 1017 Score = 32.7 bits (73), Expect = 1.0 Identities = 21/88 (23%), Positives = 38/88 (43%) Frame = -2 Query: 598 SNLRRVEKERVGQADQQPQEQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDEHRPVKRNI 419 S R+E+E G+ ++ +E+ G+ E GEG + E+E V++ Sbjct: 671 SQEERIEREEEGKEERTEKEEVGEEEESTR--------GEGEREKEEEVEEEEEKVEKET 722 Query: 418 AEERREPEQRDSDATKPR*YLSSPHGER 335 +E + ++ DS + P GER Sbjct: 723 EKEAEQEKEEDSLGAGTHPDAAIPSGER 750
>FHUB_SALTY (O87656) Ferrichrome transport system permease protein fhuB| (Ferrichrome uptake protein fhuB) Length = 685 Score = 32.7 bits (73), Expect = 1.0 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Frame = +2 Query: 137 GLGIIVDPAVFHQSFLLGGLAK-LILGDVLKEGTQLSINPLVLWAWAGLLINAINSIPAG 313 GLG++ V Q L LA+ LG + G QL I LWA G L ++ Sbjct: 96 GLGLV---GVLFQQVLRNPLAEPTTLG--VATGAQLGITVTTLWAIPGALTTQFAALTGA 150 Query: 314 ELDGGRIALAMWGRKVSSRLGSVTIALLGL 403 + G + WG+ RL VT+ L GL Sbjct: 151 CIVGALVFGVAWGK----RLSPVTLILAGL 176
>VGF_HUMAN (O15240) Neurosecretory protein VGF precursor| Length = 616 Score = 32.0 bits (71), Expect = 1.7 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 12/99 (12%) Frame = -2 Query: 655 VGGR---EAAVSFETLQSKVEISNLRRVEKERVGQADQQPQEQNGDAEADVAVLGLRYLL 485 +GGR EAA E+ + + E RR +ERVG+ D++ E +AEAD A + L Sbjct: 346 LGGRGLQEAAEERESAREEEEAEQERRGGEERVGEEDEEAAEA-AEAEADEAERARQNAL 404 Query: 484 -------GE--GSDRAPLQEEDEHRPVKRNIAEERREPE 395 GE D+ +E HR + EE E E Sbjct: 405 LFAEEEDGEAGAEDKRSQEETPGHRRKEAEGTEEGGEEE 443
>EF1A_THEAC (P19486) Elongation factor 1-alpha (EF-1-alpha) (Elongation factor| Tu) (EF-Tu) Length = 424 Score = 32.0 bits (71), Expect = 1.7 Identities = 36/145 (24%), Positives = 50/145 (34%), Gaps = 10/145 (6%) Frame = -2 Query: 646 REAAVSFETLQSKVEISNLRRVEKERVGQADQQPQEQNGDAEADVAVLGLRYLLGEGSDR 467 RE V+ + K E + G D G ++AD A+L + GEG Sbjct: 67 RERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREGEG--- 123 Query: 466 APLQEEDEHRPVKRNIAEERREPEQRDSDATKPR*YLSSPHGERYAAAVKLSCGDAIDGI 287 +++ EH + R + + DAT P Y + E A A KL I Sbjct: 124 -VMEQTREHAFLARTLGVPQMVVAINKMDATSPP-YSEKRYNEVKADAEKLLRSIGFKDI 181 Query: 286 ----------DQETSPSPQYQWVYG 242 D T PSP W G Sbjct: 182 SFVPISGYKGDNVTKPSPNMPWYKG 206
>MFAP1_MOUSE (Q9CQU1) Microfibrillar-associated protein 1| Length = 439 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%) Frame = -2 Query: 496 RYLLGEGSDRAPLQ---EEDEHRPVKRNIAEERREPEQRDSDAT 374 RY+ G+ D AP++ EEDE + E+ EPE+++ D++ Sbjct: 38 RYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSS 81
>MFAP1_HUMAN (P55081) Microfibrillar-associated protein 1| Length = 439 Score = 31.2 bits (69), Expect = 2.9 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%) Frame = -2 Query: 496 RYLLGEGSDRAPLQ---EEDEHRPVKRNIAEERREPEQRDSDAT 374 RY+ G+ D AP++ EEDE + E+ EPE+++ D++ Sbjct: 38 RYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSS 81
>IF2_YERPS (Q66F60) Translation initiation factor IF-2| Length = 892 Score = 31.2 bits (69), Expect = 2.9 Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = -2 Query: 658 TVGGREAAVSFETLQSKVEISNLRRVEKERVGQADQQPQEQ-NGDAEADVAVLGLRYLLG 482 + GG+ +V E + + ++ + + QA ++ +EQ +AEA + Sbjct: 74 STGGKSKSVQIEVRKKRTYVNTPEAEQAKAEEQAQREAEEQAQREAEATAQKIAEEKAKR 133 Query: 481 EGSDRAPLQEEDEHRPVKRNIAEERREPEQRDSDATKP 368 E ++A + ++ KR AE+ + Q+ + TKP Sbjct: 134 EAEEQAKREAAEK---AKRQAAEKEKVTNQQTDEKTKP 168
>IF2_YERPE (Q8ZBC2) Translation initiation factor IF-2| Length = 892 Score = 31.2 bits (69), Expect = 2.9 Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = -2 Query: 658 TVGGREAAVSFETLQSKVEISNLRRVEKERVGQADQQPQEQ-NGDAEADVAVLGLRYLLG 482 + GG+ +V E + + ++ + + QA ++ +EQ +AEA + Sbjct: 74 STGGKSKSVQIEVRKKRTYVNTPEAEQAKAEEQAQREAEEQAQREAEATAQKIAEEKAKR 133 Query: 481 EGSDRAPLQEEDEHRPVKRNIAEERREPEQRDSDATKP 368 E ++A + ++ KR AE+ + Q+ + TKP Sbjct: 134 EAEEQAKREAAEK---AKRQAAEKEKVTNQQTDEKTKP 168
>PRGR_CHICK (P07812) Progesterone receptor (PR)| Length = 786 Score = 31.2 bits (69), Expect = 2.9 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%) Frame = -2 Query: 613 SKVEISNLRRVEKERVGQADQQPQEQNGDAEA-DVAVLGLRYLLGEGSDRAPLQEEDEHR 437 ++V+ R R G Q G+AE DVA+ GL Y + + E+E Sbjct: 2 TEVKSKETRAPSSARDGAVLLQAPPSRGEAEGIDVALDGLLYPRSSDEEEEEEENEEEEE 61 Query: 436 PVKRNIAEERREPEQRDSDATKPR 365 + EE E E+ D D R Sbjct: 62 EEEPQQREEEEEEEEEDRDCPSYR 85
>GELS_MOUSE (P13020) Gelsolin precursor (Actin-depolymerizing factor) (ADF)| (Brevin) Length = 780 Score = 30.8 bits (68), Expect = 3.8 Identities = 20/67 (29%), Positives = 33/67 (49%) Frame = -2 Query: 628 FETLQSKVEISNLRRVEKERVGQADQQPQEQNGDAEADVAVLGLRYLLGEGSDRAPLQEE 449 FE L++ +R + ER G+A E+ G+ EA + VLG + L EG++ ++ Sbjct: 233 FERLKATQVSKGIR--DNERSGRAQVHVSEEGGEPEAMLQVLGPKPALPEGTEDTAKEDA 290 Query: 448 DEHRPVK 428 R K Sbjct: 291 ANRRLAK 297
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 30.8 bits (68), Expect = 3.8 Identities = 21/71 (29%), Positives = 31/71 (43%) Frame = -3 Query: 279 RPAQAHNTSGFMDSCVPSFRTSPRISFARPPRRND**NTAGSTMIPRPSLGGNMKPSSRR 100 R A H++SG + +P F +P RPP + +PR + G++ P Sbjct: 1086 RRASPHSSSGESVAALPPFPRAP----GRPPGAGP--GQHVTLTLPRKASSGSLPPPLSL 1139 Query: 99 TNPRENPATGP 67 PR PA GP Sbjct: 1140 FGPRAAPAGGP 1150
>SPY2_MOUSE (Q9QXV8) Sprouty homolog 2 (Spry-2)| Length = 315 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 8/58 (13%) Frame = -3 Query: 165 TAGSTMIPRPSLGGNMKPSSRRTNP--------RENPATGPAAATLSRSPRLRTILTI 16 T G T++PRP L +PS++ + R+ P P+ SR+P R+I T+ Sbjct: 56 TEGPTVVPRPGLKPAPRPSTQHKHERLHGLPEHRQPPRLQPSQVHSSRAPLSRSISTV 113
>IF2_ERWCT (Q6D9A5) Translation initiation factor IF-2| Length = 900 Score = 30.8 bits (68), Expect = 3.8 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 5/120 (4%) Frame = -2 Query: 658 TVGGREAAVSFETLQSKVEISN----LRRVEKERVGQADQQPQEQNGDAEADVAVLGLRY 491 + GG+ +V E +++ + ++ E+E + + + Q Q E LR Sbjct: 74 STGGKSKSVQIEVRKTRTYVKRDPIEAQQAEEEEQARREAEEQAQRAAEEQVKREADLRE 133 Query: 490 LLGEGSDRAPLQEEDEH-RPVKRNIAEERREPEQRDSDATKPR*YLSSPHGERYAAAVKL 314 + A Q + E KR++AE+ + Q++ + TKP S +R A A +L Sbjct: 134 TAEKAKRAADEQAKREAAEKAKRDVAEKEKVTNQQNENMTKP---AQSEKAKREAEAAEL 190
>THO1_YEAST (P40040) Protein THO1| Length = 218 Score = 30.8 bits (68), Expect = 3.8 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 9/102 (8%) Frame = -2 Query: 601 ISNLRRVEKERVGQADQQPQEQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDEHRPVKRN 422 + L + ++E G+++ PQEQN + +GS+ A ++E P +N Sbjct: 31 VQRLIKDDEESKGESEVSPQEQNQE---------------QGSEPAAIEE-----PASQN 70 Query: 421 IAE---------ERREPEQRDSDATKPR*YLSSPHGERYAAA 323 I E E EP++ + D KP S+ E AA Sbjct: 71 ITEKKEVSSEPKETNEPKEENKDVQKPSDGPSATASENEQAA 112
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.4 bits (67), Expect = 5.0 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = -3 Query: 165 TAGSTMIPRPSLGGNMKPSSRRTNPRENPATGPAAATLSRSPRLRTILTIL 13 + GST P S G P T+P P + AT S SPR T L +L Sbjct: 4204 STGSTATPS-STPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVL 4253
>SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)| Length = 1772 Score = 30.4 bits (67), Expect = 5.0 Identities = 24/90 (26%), Positives = 38/90 (42%) Frame = -2 Query: 556 DQQPQEQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDEHRPVKRNIAEERREPEQRDSDA 377 D+ EQ D EA+ GL L+G +EED+ +K EE E E D + Sbjct: 788 DESSSEQESDYEAETTAPGLAALMGGPKAIEEDEEEDDAFVIK----EEEEEVEVEDDEE 843 Query: 376 TKPR*YLSSPHGERYAAAVKLSCGDAIDGI 287 + + +R V + G+A++ I Sbjct: 844 EEK----ADTEVDRKVETVSEAVGEAVEEI 869
>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7| Length = 695 Score = 30.4 bits (67), Expect = 5.0 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 2/83 (2%) Frame = -3 Query: 285 IRRPAQAHNTSGFMDSCVPSFRTSPRISFARP-PRRND**NTAGSTMIPRPSLGGNMKPS 109 I +P ++ T P + +++ A P P +N N A ST P PS+ P+ Sbjct: 333 IIQPPSSYGTGSSAGKTNPPVNPTIKVTAAIPSPLQNT--NPAPSTF-PNPSVASPAFPN 389 Query: 108 SRRTNPRENPAT-GPAAATLSRS 43 S +NP PA+ P A+TL S Sbjct: 390 SSTSNPSTAPASASPLASTLKPS 412
>UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream-binding factor| 1) (UBF-1) (Autoantigen NOR-90) Length = 764 Score = 30.4 bits (67), Expect = 5.0 Identities = 19/81 (23%), Positives = 33/81 (40%) Frame = -2 Query: 622 TLQSKVEISNLRRVEKERVGQADQQPQEQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDE 443 TLQSK E +++ + +++ ++NGD+ D G D + EDE Sbjct: 670 TLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSED------------GGDSSESSSEDE 717 Query: 442 HRPVKRNIAEERREPEQRDSD 380 N ++ E + D D Sbjct: 718 SEDGDENEEDDEDEDDDEDDD 738
>EMRY_ECOLI (P52600) Multidrug resistance protein Y| Length = 512 Score = 30.4 bits (67), Expect = 5.0 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 10/64 (15%) Frame = +2 Query: 332 IALAMWGRKVSSRLGSVTIALL-----GLSSLFSDVAFYWAVLIFF-----LQRGPIAPL 481 IA+ + GR ++ R+G + + LL LSSL ++ VLIFF L GP+ PL Sbjct: 68 IAIPVTGR-LAQRIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMAGPLIPL 126 Query: 482 SEEI 493 S+ + Sbjct: 127 SQSL 130
>Y1582_MYCLE (Q9CBU4) Hypothetical zinc metalloprotease ML1582 (EC 3.4.24.-)| Length = 404 Score = 30.4 bits (67), Expect = 5.0 Identities = 18/53 (33%), Positives = 28/53 (52%) Frame = +2 Query: 197 AKLILGDVLKEGTQLSINPLVLWAWAGLLINAINSIPAGELDGGRIALAMWGR 355 A +I GD + G ++ A L++ AIN +P DGG IA+A++ R Sbjct: 301 ASIIGGDTVDHGLWVAF--WFFLAQLNLILGAINLVPLLPFDGGHIAIAVFER 351
>IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3| theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a) Length = 1382 Score = 30.0 bits (66), Expect = 6.6 Identities = 19/50 (38%), Positives = 22/50 (44%) Frame = -2 Query: 484 GEGSDRAPLQEEDEHRPVKRNIAEERREPEQRDSDATKPR*YLSSPHGER 335 GEG D DE RP +R +E REP R D PR + G R Sbjct: 921 GEGRDEDRSHRRDEERP-RRLGDDEDREPSLRPDDDRVPRRGMDDDRGPR 969
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 30.0 bits (66), Expect = 6.6 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -2 Query: 469 RAPLQEEDEHRPVKRNIAEERREPEQRDSD 380 RA ++ED +RP +R+ + +RR RD D Sbjct: 71 RADYRDEDTYRPSRRDRSRDRRRSRDRDDD 100
>MRAW_PSEPK (Q88N84) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 315 Score = 30.0 bits (66), Expect = 6.6 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Frame = -2 Query: 655 VGGREAAVSFETLQSKVEISNLRRVEKERVGQADQQPQE---QNGDAEADVAVLGLRYLL 485 VGGR A +SF +L+ ++ +R++ K G+AD P+ Q+ E + ++G Sbjct: 236 VGGRLAVISFHSLEDRIVKLFMRKLVK---GEADNLPRNLPVQHKVFEPKIKLIGKAQFA 292 Query: 484 GEGSDRAPLQEEDEHRPVKRNIAEERR 404 E A L+ R +AE+ R Sbjct: 293 SE----AELKANPRSRSAVMRVAEKLR 315
>MAP1B_HUMAN (P46821) Microtubule-associated protein 1B (MAP 1B) [Contains: MAP1| light chain LC1] Length = 2468 Score = 30.0 bits (66), Expect = 6.6 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%) Frame = -2 Query: 541 EQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDEHRPVKRNIA---EERREPEQRDSDATK 371 E++ AEAD + R + G DRA EED +++ A EE + E + DA + Sbjct: 975 EESAKAEADAYIREKRESVASGDDRA---EEDMDEAIEKGEAEQSEEEADEEDKAEDARE 1031 Query: 370 PR*YLSSPHGERYAAAVKLSCGDAIDGIDQE----TSPSPQ 260 E Y AV +A G +++ T+P+ Q Sbjct: 1032 EEYEPEKMEAEDYVMAVVDKAAEA-GGAEEQYGFLTTPTKQ 1071
>Y9488_RHOBA (Q7ULI3) Hypothetical UPF0324 membrane protein RB9488| Length = 543 Score = 30.0 bits (66), Expect = 6.6 Identities = 22/82 (26%), Positives = 42/82 (51%) Frame = +2 Query: 233 TQLSINPLVLWAWAGLLINAINSIPAGELDGGRIALAMWGRKVSSRLGSVTIALLGLSSL 412 T + I+P++ AW G I++ ++ A G AL +V++ + + L+G+++ Sbjct: 359 TAMGIDPILGGAWLGGTIDSTGAVAAAGAVLGDEAL-----EVAATVKMIQNILIGVTAF 413 Query: 413 FSDVAFYWAVLIFFLQRGPIAP 478 VA YW + F++R P P Sbjct: 414 C--VAIYW---VTFVERDPAGP 430
>Y344_CHLMU (Q9PKW7) Hypothetical zinc metalloprotease TC0344 (EC 3.4.24.-)| Length = 619 Score = 29.6 bits (65), Expect = 8.6 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%) Frame = +2 Query: 266 AWAGLL---INAINSIPAGELDGGRIALAMWGRKVSSRLGSVTIALLGLSSLFSDVAFYW 436 +W GL+ + +N +P LDGG I L +W VS R ++ + GL V F Sbjct: 547 SWIGLISINLAVLNLLPIPVLDGGYILLCLW-ESVSRRRLNMRLIEKGL------VPFMI 599 Query: 437 AVLIFFL 457 +++FF+ Sbjct: 600 LLILFFV 606
>TPR_HUMAN (P12270) Nucleoprotein TPR| Length = 2349 Score = 29.6 bits (65), Expect = 8.6 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 7/98 (7%) Frame = -2 Query: 625 ETLQSKVEISNLRRVEKERVGQADQQPQEQNGDAEADVAVLGLRYLLGEGSDRA------ 464 ET+ +E + + R EKER+ Q QQ Q + E D +L L+ E S+++ Sbjct: 1267 ETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELD--ILPLQEANAELSEKSGMLQAE 1324 Query: 463 -PLQEEDEHRPVKRNIAEERREPEQRDSDATKPR*YLS 353 L EED R RN + +Q+D D + R LS Sbjct: 1325 KKLLEEDVKRWKARN---QHLVSQQKDPDTEEYRKLLS 1359
>MAP1B_RAT (P15205) Microtubule-associated protein 1B (MAP 1B) (Neuraxin)| [Contains: MAP1 light chain LC1] Length = 2459 Score = 29.6 bits (65), Expect = 8.6 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = -2 Query: 541 EQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDEHRPVKRNIAEERREPEQRDSD 380 E+ AEADV + R + G DRA EED +++ AE+ E + + D Sbjct: 967 EEIAKAEADVHIKEKRESVASGDDRA---EEDMDEALEKGEAEQSEEEGEEEED 1017
>MAP1B_MOUSE (P14873) Microtubule-associated protein 1B (MAP 1B) (MAP1.2)| (MAP1(X)) [Contains: MAP1 light chain LC1] Length = 2464 Score = 29.6 bits (65), Expect = 8.6 Identities = 24/88 (27%), Positives = 37/88 (42%) Frame = -2 Query: 541 EQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDEHRPVKRNIAEERREPEQRDSDATKPR* 362 +++ AEADV + R + G DRA +D + +EE E E + DA + Sbjct: 972 DESAKAEADVHLKEKRESVVSGDDRAEEDMDDVLEKGEAEQSEEEGEEEDKAEDAREEGY 1031 Query: 361 YLSSPHGERYAAAVKLSCGDAIDGIDQE 278 E Y AV +A G+ +E Sbjct: 1032 EPDKTEAEDYVMAVADKAAEA--GVTEE 1057
>ITSN1_RAT (Q9WVE9) Intersectin-1 (EH domain and SH3 domain regulator of| endocytosis 1) Length = 1217 Score = 29.6 bits (65), Expect = 8.6 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 14/108 (12%) Frame = -2 Query: 619 LQSKVEISNLRRVEKERVGQADQQPQEQNGDAEADVAVLGLRYLLGEGSDRAPLQEEDEH 440 + SK ++ R +E ER+ Q +Q+ + + + + ++ + + +Q+E++ Sbjct: 612 IHSKQQLQKQRSIEAERLKQKEQERKSLELEKQKEEGQRRVQERDKQWQEH--VQQEEQQ 669 Query: 439 RP--------------VKRNIAEERREPEQRDSDATKPR*YLSSPHGE 338 RP VK+ AEER +PE +D + L PH E Sbjct: 670 RPRKPHEEDKLKREDSVKKKEAEERAKPEVQDKQSR-----LFHPHQE 712
>Y2869_MYCTU (O33351) Hypothetical zinc metalloprotease Rv2869c/MT2937 (EC| 3.4.24.-) Length = 404 Score = 29.6 bits (65), Expect = 8.6 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Frame = +2 Query: 197 AKLILGDVLKEGTQLSINPLVLWAWAGLLINAINSIPAGELDGGRIALAMWGR---KVSS 367 A +I GD + G ++ A L++ AIN +P DGG IA+A++ R V S Sbjct: 301 ASIIGGDTVDHGLWVAF--WFFLAQLNLILAAINLLPLLPFDGGHIAVAVFERIRNMVRS 358 Query: 368 RLGSVTIA 391 G V A Sbjct: 359 ARGKVAAA 366
>Y392_METJA (Q57837) Hypothetical protein MJ0392 (EC 3.4.24.-)| Length = 339 Score = 29.6 bits (65), Expect = 8.6 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%) Frame = +2 Query: 182 LLGGLAKLILGDVLKEGTQ---LSINP---LVLWAWAGLLINAINSIPAGELDGGRIALA 343 + G L I+G VL +Q ++IN L + L++ N IPA +DGGRI A Sbjct: 96 IAGPLVSFIIGIVLLIVSQFFDININGYPLLYTLSLLNLMLGGFNLIPAFPMDGGRILRA 155 Query: 344 MWGRKVSSRLGSVTIALLGLS 406 + +K + A +G S Sbjct: 156 ILSKKYGYLKSTKIAANIGKS 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,365,915 Number of Sequences: 219361 Number of extensions: 1949706 Number of successful extensions: 6723 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 6376 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6709 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
