Clone Information

BLAST Search Result

Clone Name	baal33j23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	361	2e-96
2	dbj\|AP005445.3\| Oryza sativa (japonica cultivar-group) genomic D...	361	2e-96
3	dbj\|AP005931.2\| Oryza sativa (japonica cultivar-group) genomic D...	361	2e-96
4	dbj\|AK062416.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	224	3e-55
5	dbj\|BA000003.2\| Buchnera aphidicola str. APS (Acyrthosiphon pisu...	48	0.036
6	ref\|NM_196369.1\| Oryza sativa (japonica cultivar-group) hypothet...	46	0.14
7	gb\|AC021891.6\| Oryza sativa (japonica cultivar-group) chromosome...	46	0.14
8	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.14
9	emb\|CT573326.1\| Pseudomonas entomophila str. L48 chromosome,comp...	46	0.14
10	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	46	0.14
11	gb\|AE008982.1\| Agrobacterium tumefaciens str. C58 circular chrom...	44	0.56
12	gb\|AE007869.1\| Agrobacterium tumefaciens str. C58, complete genome	44	0.56
13	gb\|AE001406.2\| Plasmodium falciparum 3D7 chromosome 2 section 43...	42	2.2
14	gb\|AC102430.9\| Mus musculus chromosome 14, clone RP24-103F5, com...	42	2.2
15	gb\|CP000360.1\| Acidobacteria bacterium Ellin345, complete genome	42	2.2
16	gb\|AC131671.3\| Mus musculus BAC clone RP23-312H8 from chromosome...	42	2.2
17	emb\|AL513185.12\| Human DNA sequence from clone RP11-167P22 on ch...	42	2.2
18	emb\|Z98551.1\|PFMAL3P6 Plasmodium falciparum MAL3P6, complete seq...	42	2.2
19	emb\|AL034558.3\|PFMAL3P2 Plasmodium falciparum MAL3P2, complete s...	42	2.2
20	emb\|BX510936.5\| Zebrafish DNA sequence from clone DKEYP-15C6 in ...	42	2.2
21	gb\|AC013355.7\|AC013355 Homo sapiens chromosome 15 clone RP11-178...	42	2.2
22	gb\|AF227236.1\|AF227236 Halobacterium salinarum FolC-FolP fusion ...	42	2.2
23	dbj\|BA000040.2\| Bradyrhizobium japonicum USDA 110 DNA, complete ...	42	2.2
24	dbj\|BS000201.1\| Pan troglodytes chromosome 22 clone:PTB-047A24, ...	42	2.2
25	gb\|AE004997.1\| Halobacterium sp. NRC-1 section 28 of 170 of the ...	42	2.2
26	gb\|AE016825.1\| Chromobacterium violaceum ATCC 12472, complete ge...	42	2.2
27	gb\|CP000159.1\| Salinibacter ruber DSM 13855, complete genome	42	2.2
28	gb\|U77659.1\|ASU77659 Acinetobacter lwoffii K24 cic,cis-muconate ...	42	2.2
29	gb\|AC004258.1\|AC004258 Homo sapiens chromosome 19, cosmid R33114...	42	2.2
30	dbj\|AB009373.1\| Frateuria sp. ANA-18 ORFR2, catB2, catA2, catC2 ...	42	2.2
31	gb\|AC107734.13\| Mus musculus chromosome 7, clone RP23-399E4, com...	40	8.7
32	gb\|AE017351.1\| Cryptococcus neoformans var. neoformans JEC21 chr...	40	8.7
33	gb\|AY672068.1\| Hordeum vulgare subsp. vulgare myb transcription ...	40	8.7
34	gb\|AC131594.10\| Mus musculus chromosome 15, clone RP24-568P18, c...	40	8.7
35	ref\|XM_952943.1\| Neurospora crassa OR74A hypothetical protein (N...	40	8.7
36	ref\|XM_332141.1\| Neurospora crassa OR74A hypothetical protein (N...	40	8.7
37	gb\|AE009176.1\| Agrobacterium tumefaciens str. C58 circular chrom...	40	8.7
38	gb\|AC146261.3\| Pan troglodytes BAC clone CH251-62I10 from Y, com...	40	8.7
39	gb\|AC146238.2\| Pan troglodytes BAC clone CH251-170A15 from Y, co...	40	8.7
40	gb\|CP000353.1\| Ralstonia metallidurans CH34 megaplasmid, complet...	40	8.7
41	gb\|AF521588.2\| Bradyrhizobium japonicum signal peptide protein (...	40	8.7
42	ref\|XM_773952.1\| Giardia lamblia ATCC 50803 glucokinase (GLP_49_...	40	8.7
43	gb\|AC109213.6\| Mus musculus chromosome 16, clone RP23-345L20, co...	40	8.7
44	gb\|AE014819.1\| Plasmodium falciparum 3D7 chromosome 14 section 4...	40	8.7
45	gb\|CP000088.1\| Thermobifida fusca YX, complete genome	40	8.7
46	emb\|CR522870.1\| Desulfotalea psychrophila LSv54 chromosome	40	8.7
47	emb\|CR382136.1\| Debaryomyces hansenii chromosome D of strain CBS...	40	8.7
48	emb\|AL035475.7\|PFMAL4P2 Plasmodium falciparum MAL4P2	40	8.7
49	emb\|CR354422.7\| Zebrafish DNA sequence from clone CH211-129O4 in...	40	8.7
50	dbj\|BS000635.3\| Pan troglodytes chromosome Y clone: PTB-622E07, ...	40	8.7
51	emb\|CR392037.10\| Zebrafish DNA sequence from clone CH211-244O22 ...	40	8.7
52	gb\|DP000054.1\| Pan troglodytes chromosome Y, partial sequence	40	8.7
53	gb\|AF150874.1\|AF150874 Giardia intestinalis putative glucokinase...	40	8.7
54	gb\|AC148663.1\| Macaca mulatta Major Histocompatibility Complex B...	40	8.7
55	gb\|AC068901.8\|AC068901 Arabidopsis thaliana chromosome 1 BAC F1O...	40	8.7
56	gb\|AE004605.1\| Pseudomonas aeruginosa PAO1, section 166 of 529 o...	40	8.7
57	emb\|BX469899.6\| Zebrafish DNA sequence from clone CH211-155K24 i...	40	8.7
58	dbj\|BS000175.1\| Pan troglodytes chromosome 22 clone:PTB-091H17, ...	40	8.7
59	emb\|AL646053.1\| Ralstonia solanacearum GMI1000 megaplasmid compl...	40	8.7
60	emb\|BX088722.8\| Zebrafish DNA sequence from clone CH211-253P18 i...	40	8.7
61	gb\|AF016253.1\|AF016253 Klebsiella aerogenes D-amino acid dehydro...	40	8.7
62	emb\|AL935158.7\| Zebrafish DNA sequence from clone CH211-232G13, ...	40	8.7
63	emb\|AL833800.6\| Mouse DNA sequence from clone RP23-147P20 on chr...	40	8.7

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  361 bits (182), Expect = 2e-96
 Identities = 323/370 (87%)
 Strand = Plus / Minus

                                                                            
Query: 14       gctgctcggccgcttcgtctacggcgacgacgcgtaccgcaacgcccgcttcaagatcgt 73
                |||||| || || |||||| ||||||||||||||||||| ||||| || |||||||||||
Sbjct: 28834745 gctgctggggcggttcgtccacggcgacgacgcgtaccggaacgcgcggttcaagatcgt 28834686

                                                                            
Query: 74       caaccgcatcgtcaagggcccctggctcgtccgcgccaccgtgggcaactacggcgcgtg 133
                 ||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||| ||
Sbjct: 28834685 gaaccggatcgtgaagggcccgtggctggtgcgcgccaccgtcggcaactacgccgcctg 28834626

                                                                            
Query: 134      cctcctgggccgcgcgctcacgtgccgctaccacaagggcgatgattacctcgagatcga 193
                |||||| |||||||||||||| ||||||||||||   || || |  ||||||||||||||
Sbjct: 28834625 cctcctcggccgcgcgctcacctgccgctaccacggcggggacggctacctcgagatcga 28834566

                                                                            
Query: 194      cgtggacatcggcagctcggcgatcgccaccgccatcctgcatctggcgctgggcgccgt 253
                ||| |||||||||||||| || ||||||| ||||||||| || || ||||| ||||| ||
Sbjct: 28834565 cgtcgacatcggcagctccgccatcgccagcgccatcctccacctcgcgctcggcgcggt 28834506

                                                                            
Query: 254      cacgtcggtgaccatcgacatgggcttccttgttgagtcccagtccgaggaggagctgcc 313
                ||| || || |||||||||||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 28834505 cacctccgtcaccatcgacatggggttcctcgtcgagtcccagtccgaggaggagctccc 28834446

                                                                            
Query: 314      cgaaaagctcttcggcgctgtgcgcatcgcgcagatggagatgggctcggccaagtatgt 373
                ||| | |||||||||||| ||||||||||||||||||||||||||| | |||||||||||
Sbjct: 28834445 cgagaggctcttcggcgccgtgcgcatcgcgcagatggagatgggcgccgccaagtatgt 28834386

                          
Query: 374      ggagacggcg 383
                 |||||||||
Sbjct: 28834385 cgagacggcg 28834376



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                            
Query: 435      tcggcgagggtggccaacgatagccgccaccaggaacgggccagcggcaaggccagcagg 494
                ||||||| |||||||||||||||||||||||| ||||| |||  |||||||| | | |||
Sbjct: 28834321 tcggcgaaggtggccaacgatagccgccaccaagaacgcgccgccggcaaggtcgggagg 28834262

                                     
Query: 495      tcgatgagctgccaggaacgc 515
                |||||||||||||||||||||
Sbjct: 28834261 tcgatgagctgccaggaacgc 28834241

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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0028E05
          Length = 157631

 Score =  361 bits (182), Expect = 2e-96
 Identities = 323/370 (87%)
 Strand = Plus / Minus

                                                                          
Query: 14     gctgctcggccgcttcgtctacggcgacgacgcgtaccgcaacgcccgcttcaagatcgt 73
              |||||| || || |||||| ||||||||||||||||||| ||||| || |||||||||||
Sbjct: 142520 gctgctggggcggttcgtccacggcgacgacgcgtaccggaacgcgcggttcaagatcgt 142461

                                                                          
Query: 74     caaccgcatcgtcaagggcccctggctcgtccgcgccaccgtgggcaactacggcgcgtg 133
               ||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||| ||
Sbjct: 142460 gaaccggatcgtgaagggcccgtggctggtgcgcgccaccgtcggcaactacgccgcctg 142401

                                                                          
Query: 134    cctcctgggccgcgcgctcacgtgccgctaccacaagggcgatgattacctcgagatcga 193
              |||||| |||||||||||||| ||||||||||||   || || |  ||||||||||||||
Sbjct: 142400 cctcctcggccgcgcgctcacctgccgctaccacggcggggacggctacctcgagatcga 142341

                                                                          
Query: 194    cgtggacatcggcagctcggcgatcgccaccgccatcctgcatctggcgctgggcgccgt 253
              ||| |||||||||||||| || ||||||| ||||||||| || || ||||| ||||| ||
Sbjct: 142340 cgtcgacatcggcagctccgccatcgccagcgccatcctccacctcgcgctcggcgcggt 142281

                                                                          
Query: 254    cacgtcggtgaccatcgacatgggcttccttgttgagtcccagtccgaggaggagctgcc 313
              ||| || || |||||||||||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 142280 cacctccgtcaccatcgacatggggttcctcgtcgagtcccagtccgaggaggagctccc 142221

                                                                          
Query: 314    cgaaaagctcttcggcgctgtgcgcatcgcgcagatggagatgggctcggccaagtatgt 373
              ||| | |||||||||||| ||||||||||||||||||||||||||| | |||||||||||
Sbjct: 142220 cgagaggctcttcggcgccgtgcgcatcgcgcagatggagatgggcgccgccaagtatgt 142161

                        
Query: 374    ggagacggcg 383
               |||||||||
Sbjct: 142160 cgagacggcg 142151



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                          
Query: 435    tcggcgagggtggccaacgatagccgccaccaggaacgggccagcggcaaggccagcagg 494
              ||||||| |||||||||||||||||||||||| ||||| |||  |||||||| | | |||
Sbjct: 142096 tcggcgaaggtggccaacgatagccgccaccaagaacgcgccgccggcaaggtcgggagg 142037

                                   
Query: 495    tcgatgagctgccaggaacgc 515
              |||||||||||||||||||||
Sbjct: 142036 tcgatgagctgccaggaacgc 142016

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>dbj|AP005931.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0545E05
          Length = 163229

 Score =  361 bits (182), Expect = 2e-96
 Identities = 323/370 (87%)
 Strand = Plus / Minus

                                                                        
Query: 14   gctgctcggccgcttcgtctacggcgacgacgcgtaccgcaacgcccgcttcaagatcgt 73
            |||||| || || |||||| ||||||||||||||||||| ||||| || |||||||||||
Sbjct: 9831 gctgctggggcggttcgtccacggcgacgacgcgtaccggaacgcgcggttcaagatcgt 9772

                                                                        
Query: 74   caaccgcatcgtcaagggcccctggctcgtccgcgccaccgtgggcaactacggcgcgtg 133
             ||||| ||||| |||||||| ||||| || ||||||||||| |||||||||| ||| ||
Sbjct: 9771 gaaccggatcgtgaagggcccgtggctggtgcgcgccaccgtcggcaactacgccgcctg 9712

                                                                        
Query: 134  cctcctgggccgcgcgctcacgtgccgctaccacaagggcgatgattacctcgagatcga 193
            |||||| |||||||||||||| ||||||||||||   || || |  ||||||||||||||
Sbjct: 9711 cctcctcggccgcgcgctcacctgccgctaccacggcggggacggctacctcgagatcga 9652

                                                                        
Query: 194  cgtggacatcggcagctcggcgatcgccaccgccatcctgcatctggcgctgggcgccgt 253
            ||| |||||||||||||| || ||||||| ||||||||| || || ||||| ||||| ||
Sbjct: 9651 cgtcgacatcggcagctccgccatcgccagcgccatcctccacctcgcgctcggcgcggt 9592

                                                                        
Query: 254  cacgtcggtgaccatcgacatgggcttccttgttgagtcccagtccgaggaggagctgcc 313
            ||| || || |||||||||||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 9591 cacctccgtcaccatcgacatggggttcctcgtcgagtcccagtccgaggaggagctccc 9532

                                                                        
Query: 314  cgaaaagctcttcggcgctgtgcgcatcgcgcagatggagatgggctcggccaagtatgt 373
            ||| | |||||||||||| ||||||||||||||||||||||||||| | |||||||||||
Sbjct: 9531 cgagaggctcttcggcgccgtgcgcatcgcgcagatggagatgggcgccgccaagtatgt 9472

                      
Query: 374  ggagacggcg 383
             |||||||||
Sbjct: 9471 cgagacggcg 9462



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                        
Query: 435  tcggcgagggtggccaacgatagccgccaccaggaacgggccagcggcaaggccagcagg 494
            ||||||| |||||||||||||||||||||||| ||||| |||  |||||||| | | |||
Sbjct: 9407 tcggcgaaggtggccaacgatagccgccaccaagaacgcgccgccggcaaggtcgggagg 9348

                                 
Query: 495  tcgatgagctgccaggaacgc 515
            |||||||||||||||||||||
Sbjct: 9347 tcgatgagctgccaggaacgc 9327

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>dbj|AK062416.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-F07, full
           insert sequence
          Length = 568

 Score =  224 bits (113), Expect = 3e-55
 Identities = 179/201 (89%)
 Strand = Plus / Plus

                                                                       
Query: 183 ctcgagatcgacgtggacatcggcagctcggcgatcgccaccgccatcctgcatctggcg 242
           |||||||||||||| |||||||||||||| || ||||||| ||||||||| || || |||
Sbjct: 1   ctcgagatcgacgtcgacatcggcagctccgccatcgccagcgccatcctccacctcgcg 60

                                                                       
Query: 243 ctgggcgccgtcacgtcggtgaccatcgacatgggcttccttgttgagtcccagtccgag 302
           || ||||| ||||| || || |||||||||||||| ||||| || |||||||||||||||
Sbjct: 61  ctcggcgcggtcacctccgtcaccatcgacatggggttcctcgtcgagtcccagtccgag 120

                                                                       
Query: 303 gaggagctgcccgaaaagctcttcggcgctgtgcgcatcgcgcagatggagatgggctcg 362
           |||||||| ||||| | |||||||||||| ||||||||||||||||||||||||||| | 
Sbjct: 121 gaggagctccccgagaggctcttcggcgccgtgcgcatcgcgcagatggagatgggcgcc 180

                                
Query: 363 gccaagtatgtggagacggcg 383
           ||||||||||| |||||||||
Sbjct: 181 gccaagtatgtcgagacggcg 201



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                       
Query: 435 tcggcgagggtggccaacgatagccgccaccaggaacgggccagcggcaaggccagcagg 494
           ||||||| |||||||||||||||||||||||| ||||| |||  |||||||| | | |||
Sbjct: 256 tcggcgaaggtggccaacgatagccgccaccaagaacgcgccgccggcaaggtcgggagg 315

                                
Query: 495 tcgatgagctgccaggaacgc 515
           |||||||||||||||||||||
Sbjct: 316 tcgatgagctgccaggaacgc 336

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>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete
              sequence
          Length = 640681

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 613    gatgggatatatatataattattt 636
              ||||||||||||||||||||||||
Sbjct: 170491 gatgggatatatatataattattt 170468

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>ref|NM_196369.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0050N08.10), mRNA
          Length = 447

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 106 gcgccaccgtgggcaactacggc 128
           |||||||||||||||||||||||
Sbjct: 335 gcgccaccgtgggcaactacggc 357

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>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0050N08, complete sequence
          Length = 144593

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 106   gcgccaccgtgggcaactacggc 128
             |||||||||||||||||||||||
Sbjct: 48158 gcgccaccgtgggcaactacggc 48180

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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 106      gcgccaccgtgggcaactacggc 128
                |||||||||||||||||||||||
Sbjct: 12949242 gcgccaccgtgggcaactacggc 12949264

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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 396     gagacggccggcaaggcggcgccgggg 422
               |||||||||||||||| ||||||||||
Sbjct: 3302680 gagacggccggcaaggaggcgccgggg 3302706

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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 106      gcgccaccgtgggcaactacggc 128
                |||||||||||||||||||||||
Sbjct: 12956582 gcgccaccgtgggcaactacggc 12956604

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>gb|AE008982.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 8 of
            256 of the complete sequence
          Length = 11330

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 50   ccgcaacgcccgcttcaagatc 71
            ||||||||||||||||||||||
Sbjct: 3110 ccgcaacgcccgcttcaagatc 3089

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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 50    ccgcaacgcccgcttcaagatc 71
             ||||||||||||||||||||||
Sbjct: 83151 ccgcaacgcccgcttcaagatc 83130



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 219     gccaccgccatcctgcatct 238
               ||||||||||||||||||||
Sbjct: 2244146 gccaccgccatcctgcatct 2244165

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>gb|AE001406.2| Plasmodium falciparum 3D7 chromosome 2 section 43 of 73 of the complete
             sequence
          Length = 14591

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 619   atatatatataattatttgtt 639
             |||||||||||||||||||||
Sbjct: 10427 atatatatataattatttgtt 10407

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>gb|AC102430.9| Mus musculus chromosome 14, clone RP24-103F5, complete sequence
          Length = 153864

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 619   atatatatataattatttgtt 639
             |||||||||||||||||||||
Sbjct: 96573 atatatatataattatttgtt 96593

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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 213    gcgatcgccaccgccatcctgcatc 237
              |||||||||||||||||| ||||||
Sbjct: 460239 gcgatcgccaccgccatcgtgcatc 460215

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>gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome 3, complete sequence
          Length = 195851

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 619    atatatatataattatttgtt 639
              |||||||||||||||||||||
Sbjct: 170701 atatatatataattatttgtt 170721

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>emb|AL513185.12| Human DNA sequence from clone RP11-167P22 on chromosome 10 Contains the
              5' end of the CBARA1 gene for calcium binding atopy-related
              autoantigen 1, an HMG17 pseudogene, a cytochrome c oxidase
              subunit VIIc (COX7C) pseudogene, a novel gene, a novel
              pseudogene (FLJ12684) and a CpG island, complete sequence
          Length = 163632

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 614    atgggatatatatataattat 634
              |||||||||||||||||||||
Sbjct: 148435 atgggatatatatataattat 148415

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>emb|Z98551.1|PFMAL3P6 Plasmodium falciparum MAL3P6, complete sequence
          Length = 164399

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 619   atatatatataattatttgtt 639
             |||||||||||||||||||||
Sbjct: 76830 atatatatataattatttgtt 76810

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>emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete sequence
          Length = 158548

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 619    atatatatataattatttgtt 639
              |||||||||||||||||||||
Sbjct: 146179 atatatatataattatttgtt 146159

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>emb|BX510936.5| Zebrafish DNA sequence from clone DKEYP-15C6 in linkage group 21,
             complete sequence
          Length = 146287

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 619   atatatatataattatttgtt 639
             |||||||||||||||||||||
Sbjct: 19106 atatatatataattatttgtt 19086

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>gb|AC013355.7|AC013355 Homo sapiens chromosome 15 clone RP11-178D12 map 15q21.3, complete
              sequence
          Length = 151133

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 619    atatatatataattatttgtt 639
              |||||||||||||||||||||
Sbjct: 101374 atatatatataattatttgtt 101394

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>gb|AF227236.1|AF227236 Halobacterium salinarum FolC-FolP fusion protein gene, complete cds
          Length = 2614

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 247 gcgccgtcacgtcggtgaccatcga 271
           |||||||||||||||||||| ||||
Sbjct: 479 gcgccgtcacgtcggtgaccctcga 503

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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 473     ggccagcggcaaggccagcag 493
               |||||||||||||||||||||
Sbjct: 7304824 ggccagcggcaaggccagcag 7304804



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 231     ctgcatctggcgctgggcgc 250
               ||||||||||||||||||||
Sbjct: 7145092 ctgcatctggcgctgggcgc 7145073

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>dbj|BS000201.1| Pan troglodytes chromosome 22 clone:PTB-047A24, map 22, complete
              sequences
          Length = 165662

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 619    atatatatataattatttgtt 639
              |||||||||||||||||||||
Sbjct: 163575 atatatatataattatttgtt 163595

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>gb|AE004997.1| Halobacterium sp. NRC-1 section 28 of 170 of the complete genome
          Length = 17112

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 247   gcgccgtcacgtcggtgaccatcga 271
             |||||||||||||||||||| ||||
Sbjct: 11923 gcgccgtcacgtcggtgaccctcga 11899

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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 221     caccgccatcctgcatctggc 241
               |||||||||||||||||||||
Sbjct: 4211907 caccgccatcctgcatctggc 4211887

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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 198     gacatcggcagctcggcgatc 218
               |||||||||||||||||||||
Sbjct: 1253616 gacatcggcagctcggcgatc 1253596



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 35      cggcgacgacgcgtaccgca 54
               ||||||||||||||||||||
Sbjct: 1524515 cggcgacgacgcgtaccgca 1524496

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>gb|U77659.1|ASU77659 Acinetobacter lwoffii K24 cic,cis-muconate lactonizing enzyme I
            (catB), catechol 1,2-dioxygenase (catA), and
            muconolactone isomerase (catC) genes, complete cds; and
            unknown genes
          Length = 5767

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 67   agatcgtcaaccgcatcgtca 87
            |||||||||||||||||||||
Sbjct: 1714 agatcgtcaaccgcatcgtca 1734

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>gb|AC004258.1|AC004258 Homo sapiens chromosome 19, cosmid R33114, complete sequence
          Length = 36295

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 345   cagatggagatgggctcggcc 365
             |||||||||||||||||||||
Sbjct: 27648 cagatggagatgggctcggcc 27628

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>dbj|AB009373.1| Frateuria sp. ANA-18 ORFR2, catB2, catA2, catC2 and putative electron
            transfer protein genes, complete cds
          Length = 5449

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 67   agatcgtcaaccgcatcgtca 87
            |||||||||||||||||||||
Sbjct: 2521 agatcgtcaaccgcatcgtca 2541

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>gb|AC107734.13| Mus musculus chromosome 7, clone RP23-399E4, complete sequence
          Length = 198485

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 619   atatatatataattatttgt 638
             ||||||||||||||||||||
Sbjct: 75201 atatatatataattatttgt 75220

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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
             sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   atcgccaccgccatcctgca 235
             ||||||||||||||||||||
Sbjct: 39949 atcgccaccgccatcctgca 39968

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>gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcription factor mRNA,
           complete cds
          Length = 1542

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 18  ctcggccgcttcgtctacggcgac 41
           |||||||||||||||| |||||||
Sbjct: 502 ctcggccgcttcgtctccggcgac 525

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>gb|AC131594.10| Mus musculus chromosome 15, clone RP24-568P18, complete sequence
          Length = 181495

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 619   atatatatataattatttgt 638
             ||||||||||||||||||||
Sbjct: 72100 atatatatataattatttgt 72081

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>ref|XM_952943.1| Neurospora crassa OR74A hypothetical protein (NCU09450.1) partial
            mRNA
          Length = 3567

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  tccgaggaggagctgcccga 316
            ||||||||||||||||||||
Sbjct: 1156 tccgaggaggagctgcccga 1175

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>ref|XM_332141.1| Neurospora crassa OR74A hypothetical protein (NCU09450.1) partial
            mRNA
          Length = 3567

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  tccgaggaggagctgcccga 316
            ||||||||||||||||||||
Sbjct: 1156 tccgaggaggagctgcccga 1175

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>gb|AE009176.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 202
            of 256 of the complete sequence
          Length = 10375

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 219  gccaccgccatcctgcatct 238
            ||||||||||||||||||||
Sbjct: 7826 gccaccgccatcctgcatct 7845

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>gb|AC146261.3| Pan troglodytes BAC clone CH251-62I10 from Y, complete sequence
          Length = 161087

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 620   tatatatataattatttgtt 639
             ||||||||||||||||||||
Sbjct: 70732 tatatatataattatttgtt 70713

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>gb|AC146238.2| Pan troglodytes BAC clone CH251-170A15 from Y, complete sequence
          Length = 169552

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 620    tatatatataattatttgtt 639
              ||||||||||||||||||||
Sbjct: 168499 tatatatataattatttgtt 168480

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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     cctgcatctggcgctgggcg 249
               ||||||||||||||||||||
Sbjct: 1335070 cctgcatctggcgctgggcg 1335051

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>gb|AF521588.2| Bradyrhizobium japonicum signal peptide protein (pslP) gene, partial
            cds; putative signal peptide protein, TauC protein, TauB
            protein (tauB), putative ATP-binding ABC transporter
            protein (opuA), putative ABC transporter (opuB),
            hypothetical protein, hypothetical protein, putative
            inner membrane protein, putative transcriptional
            regulator, inner membrane protein, oxidoreductase, and
            hypothetical protein genes, complete cds; and GGDEF
            family sensory box protein gene, partial cds
          Length = 12483

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  ctgcatctggcgctgggcgc 250
            ||||||||||||||||||||
Sbjct: 5528 ctgcatctggcgctgggcgc 5509

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>ref|XM_773952.1| Giardia lamblia ATCC 50803 glucokinase (GLP_49_57702_58733) partial
           mRNA
          Length = 1032

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 catcgacatgggcttccttg 285
           ||||||||||||||||||||
Sbjct: 714 catcgacatgggcttccttg 733

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>gb|AC109213.6| Mus musculus chromosome 16, clone RP23-345L20, complete sequence
          Length = 244558

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 619    atatatatataattatttgt 638
              ||||||||||||||||||||
Sbjct: 102963 atatatatataattatttgt 102944

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>gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete
              sequence
          Length = 251448

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 620    tatatatataattatttgtt 639
              ||||||||||||||||||||
Sbjct: 111608 tatatatataattatttgtt 111627

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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 487     ccagcaggtcgatgagctgc 506
               ||||||||||||||||||||
Sbjct: 2062570 ccagcaggtcgatgagctgc 2062589

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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    agctgcccgaaaagctcttc 326
              ||||||||||||||||||||
Sbjct: 277658 agctgcccgaaaagctcttc 277677

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>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
               hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 618     gatatatatataattatttg 637
               ||||||||||||||||||||
Sbjct: 1397708 gatatatatataattatttg 1397727

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>emb|AL035475.7|PFMAL4P2 Plasmodium falciparum MAL4P2
          Length = 234081

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 619    atatatatataattatttgt 638
              ||||||||||||||||||||
Sbjct: 140372 atatatatataattatttgt 140391

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>emb|CR354422.7| Zebrafish DNA sequence from clone CH211-129O4 in linkage group 20,
             complete sequence
          Length = 177570

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 619   atatatatataattatttgt 638
             ||||||||||||||||||||
Sbjct: 40834 atatatatataattatttgt 40853

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>dbj|BS000635.3| Pan troglodytes chromosome Y clone: PTB-622E07, complete sequence
          Length = 130144

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 620   tatatatataattatttgtt 639
             ||||||||||||||||||||
Sbjct: 89300 tatatatataattatttgtt 89281

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>emb|CR392037.10| Zebrafish DNA sequence from clone CH211-244O22 in linkage group 5,
             complete sequence
          Length = 140415

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 619   atatatatataattatttgt 638
             ||||||||||||||||||||
Sbjct: 74567 atatatatataattatttgt 74548

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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 620      tatatatataattatttgtt 639
                ||||||||||||||||||||
Sbjct: 20005403 tatatatataattatttgtt 20005422

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>gb|AF150874.1|AF150874 Giardia intestinalis putative glucokinase (gk) gene, partial cds
          Length = 1029

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 catcgacatgggcttccttg 285
           ||||||||||||||||||||
Sbjct: 714 catcgacatgggcttccttg 733

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>gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex BAC MMU012K22, complete
             sequence
          Length = 174897

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 466   aggaacgggccagcggcaaggcca 489
             |||| |||||||||||||||||||
Sbjct: 15025 aggaccgggccagcggcaaggcca 15048

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>gb|AC068901.8|AC068901 Arabidopsis thaliana chromosome 1 BAC F1O3 genomic sequence, complete
             sequence
          Length = 74265

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 619   atatatatataattatttgt 638
             ||||||||||||||||||||
Sbjct: 51997 atatatatataattatttgt 52016

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>gb|AE004605.1| Pseudomonas aeruginosa PAO1, section 166 of 529 of the complete genome
          Length = 10949

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   gcgccaccgtgggcaactacggcg 129
             ||||| ||||||||||||||||||
Sbjct: 10779 gcgccgccgtgggcaactacggcg 10756

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>emb|BX469899.6| Zebrafish DNA sequence from clone CH211-155K24 in linkage group 4,
             complete sequence
          Length = 184184

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 619   atatatatataattatttgt 638
             ||||||||||||||||||||
Sbjct: 50716 atatatatataattatttgt 50735

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>dbj|BS000175.1| Pan troglodytes chromosome 22 clone:PTB-091H17, map 22, complete
              sequences
          Length = 183155

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 606    gaagaaggatgggatatata 625
              ||||||||||||||||||||
Sbjct: 151645 gaagaaggatgggatatata 151626

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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 80      catcgtcaagggcccctggctcgt 103
               ||||||||||||| ||||||||||
Sbjct: 2078047 catcgtcaagggcgcctggctcgt 2078024

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>emb|BX088722.8| Zebrafish DNA sequence from clone CH211-253P18 in linkage group 20,
             complete sequence
          Length = 195359

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 619   atatatatataattatttgt 638
             ||||||||||||||||||||
Sbjct: 64852 atatatatataattatttgt 64871

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>gb|AF016253.1|AF016253 Klebsiella aerogenes D-amino acid dehydrogenase (dadA) and alanine
            racemase (dadB) genes, complete cds
          Length = 2813

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  gcaaggccagcaggtcgatg 500
            ||||||||||||||||||||
Sbjct: 1681 gcaaggccagcaggtcgatg 1662

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>emb|AL935158.7| Zebrafish DNA sequence from clone CH211-232G13, complete sequence
          Length = 149973

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 619   atatatatataattatttgt 638
             ||||||||||||||||||||
Sbjct: 55852 atatatatataattatttgt 55833

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>emb|AL833800.6| Mouse DNA sequence from clone RP23-147P20 on chromosome X, complete
              sequence
          Length = 199542

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 619    atatatatataattatttgt 638
              ||||||||||||||||||||
Sbjct: 178544 atatatatataattatttgt 178525


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,378,086
Number of Sequences: 3902068
Number of extensions: 13378086
Number of successful extensions: 140898
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139175
Number of HSP's gapped (non-prelim): 1723
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result